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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14812#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2084 fasta sequence
[TACGCGGCCGGAGAGAGGAGGGGGGAAGAGAGGATCTCGCAGAGCGCCATAGCCTCGGATCCAGAAGCGGAATTCGGTGGAGGTCTCGGGCACCTGGATCGATCGGAGGAAGGGAAGGCGGAGCAGCGGTGATGGGGAAGGCGGCGGCGGTGGGGACGGCGGTGGTGGTGGCCGCGGCGGTCGGGGTGGCGGTGGTGCTGGCGCGGAGGCGGAGGAGGAGGGACCTGGAGCTGGTGGAGGGAGCCGCGGCGGAGAGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGAGCACGCGCTGTCGACCCCGACGGCGCTGCTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGCGAGGCCTGCGCGGGGACAGCCACGCCATGGTTAAGATGCTCATCACCTACGTCGACAACCTCCCCACCGGAAATGAACAGGGGTTGTTTTATGCATTGGATCTTGGAGGAACCAACTTCCGCGTCCTGCGAGTCCAAC-TCGGTGGCAAGGAGAAACGTGTCGT-CCAACAACAGTACGA-GGAAG-TC-TCAA-TTCCACCACATCTGATGGTTGGAAC-TTCCATGGAACTG-TTTGATTTTATTGCTTCTGCATTGTCAAAATTTGTTGATAC-TGAAGGTGATGATTTCCA-CCTCCCAGAAGGGAGACAGAGAGAGC-TGGGCTTCACCTTTTCCTTCCCAGTGAGCCAGACATCAATATCGTCAGGAACGCTCATCAAGTGGACAAAGGGTTTCTCCATCAATGACGCGGTTGGCGAAGATGTTGTATCTGAGTTGGGCAAGGCCATGGAGAGGCAGGGATTAGATATGAAAATTGCAGCATTGGTTAATGACACTGTCGGCACATTGGCTGGTGGGAGGTATGCGGATAACAGTGTTGTTGCTGCTATAATATTGGGCACTGGTACAAATGCAGCATATGTTGAGAATGCTAATGCAATTCCTAAATGGACCGGTTTACTGCCTAGGTCCGGAAATATGGT-AATCAACACAGAATGGGGGAGCTTTAAATCAGATAAGCTTCCTCTTTCAGAATTCGATAAAGCAATGGATTTTGAAAGCTTGAATCCTGGAGAGCAGATATATGAAAAGTTGATTTCTGGCATGTATCTTGGAGAGATAGTGCGAAGAATCTTGCTGAAGCTTGCTCATGATGCAGCTTTGTTTGGGGATGTTGTTCCATCTAAGCTAGAGCAACCGTTTGTACTAAGGACACCGGATATGTCAGCCATGCATCATGACTCGTCACATGACCTTAAAACTGTTGGAGCTAAGCTAAAGGATATCGTCGGGGTCCCAGATACTTCCCTGGAAGTAAGATACATTACCAGTCACATTTGTGACATAGTTGCAGAGCGTGCTGCACGCTTGGCTGCTGCTGGCATATATGGGGTCCTAAAGAAGCTAGGTCGGGACAAGATGCCAAAAGACGGCAGTAAGATGCCTAGGACTGTCATTGCCTTGGATGGTGGGCTCTATGAACATTACAAGAAGTTCAGCAGTTGCTTAGAATCAACTCTAACAGACCTTCTTGGGGATGATGTCTCGTCTTCGGTGGTTACCAAGCTGGCCAACGATGGTTCTGGCATTGGAGCTGCTCTTCTCGCAGCCTCGCACT-CCCAGTATG-C-CGAGATCGACTAGCTTTAAGGATGATCTTGATGAATGATGAATCAAACTCCGTTTGTAGGTTCTCATTTCCCCCTTCAAAAT-CCACATAATACTCCTGGCTCCCCCCTTGAAATCTTACCATCTTTTTTTGGCTATTCTGA-GGG---CAAACA-TAAGTG-CCTCTG-CAGCGGGATATAGCTAGTATAGCGCCAATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACA-GGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGAGAACCAAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTCTTGTTTGATCTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK065207 [TACGCGGCCGGAGAGAGGAGGGGGGAAGAGAGGATCTCGCAGAGCGCCATAGCCTCGGATCCAGAAGCGGAATTCGGTGGAGGTCTCGGGCACCTGGATCGATCGGAGGAAGGGAAGGCGGAGCAGCGGTGATGGGGAAGGCGGCGGCGGTGGGGACGGCGGTGGTGGTGGCCGCGGCGGTCGGGGTGGCGGTGGTGCTGGCGCGGAGGCGGAGGAGGAGGGACCTGGAGCTGGTGGAGGGAGCCGCGGCGGAGAGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGAGCACGCGCTGTCGACCCCGACGGCGCTGCTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGCGAGGCCTGCGCGGGGACAGCCACGCCATGGTTAAGATGCTCATCACCTACGTCGACAACCTCCCCACCGGAAATGAACAGGGGTTGTTTTATGCATTGGATCTTGGAGGAACCAACTTCCGCGTCCTGCGAGTCCAAC TCGGTGGCAAGGAGAAACGTGTCGT CCAACAACAGTACGA GGAAG TC TCAA TTCCACCACATCTGATGGTTGGAAC TTCCATGGAACTG TTTGATTTTATTGCTTCTGCATTGTCAAAATTTGTTGATAC TGAAGGTGATGATTTCCA CCCCCCAGAAGGGAGACAGAGAGAGC TGGGCTTCACCTTTTCCTTCCCAGTGAGCCAGACATCAATATCGTCAGGAACGCTCATCAAGTGGACAAAGGGTTTCTCCATCAATGACGCGGTTGGCGAAGATGTTGTATCTGAGTTGGGCAAGGCCATGGAGAGGCAGGGATTAGATATGAAAATTGCAGCATTGGTTAATGACACTGTCGGCACATTGGCTGGTGGGAGGTATGCGGATAACAGTGTTGTTGCTGCTATAATATTGGGCACTGGTACAAATGCAGCATATGTTGAGAATGCTAATGCAATTCCTAAATGGACCGGTTTACTGCCTAGGTCCGGAAATATGGT AATCAACACAGAATGGGGGAGCTTTAAATCAGATAAGCTTCCTCTTTCAGAATTCGATAAAGCAATGGATTTTGAAAGCTTGAATCCTGGAGAGCAGATATATGAAAAGTTGATTTCTGGCATGTATCTTGGAGAGATAGTGCGAAGAATCTTGCTGAAGCTTGCTCATGATGCAGCTTTGTTTGGGGATGTTGTTCCATCTAAGCTAGAGCAACCGTTTGTACTAAGGACACCGGATATGTCAGCCATGCATCATGACTCGTCACATGACCTTAAAACTGTTGGAGCTAAGCTAAAGGATATCGTCGGGGTCCCAGATACTTCCCTGGAAGTAAGATACATTACCAGTCACATTTGTGACATAGTTGCAGAGCGTGCTGCACGCTTGGCTGCTGCTGGCATATATGGGGTCCTAAAGAAGCTAGGTCGGGACAAGATGCCAAAAGACGGCAGTAAGATGCCTAGGACTGTCATTGCCTTGGATGGTGGGCTCTATGAACATTACAAGAAGTTCAGCAGTTGCTTAGAATCAACTCTAACAGACCTTCTTGGGGATGATGTCTCGTCTTCGGTGGTTACCAAGCTGGCCAACGATGGTTCTGGCATTGGAGCTGCTCTTCTCGCAGCCTCGCACT CCCAGTATG C CGAGATCGACTAGCTTTAAGGATGATCTTGATGAATGATGAATCAAACTCCGTTTGTAGGTTCTCATTTCCCCCTTCAAAAT CCACATAATACTCCTGGCTCCCCCCTTGAAATCTTACCATCTTTTTTTGGCTATTCTGA GGG CAAACA TAAGTG CCTCTG CAGCGGGATATAGCTAGTATAGCGCCAATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACA GGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGAGAACCAAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATC ]
[+] EMBL AF372831 [ AAGGGAAGGCGGAGCAGCGGTGATGGGGAAGGCGGCGGCGGTGGGGACGGCGGTGGTGGTGGCCGCGGCGGTCGGGGTGGCGGTGGTGCTGGCGCGGAGGCGGAGGAGGAGGGACCTGGAGCTGGTGGAGGGAGCCGCGGCGGAGAGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGAGCACGCGCTGTCGACCCCGACGGCGCTGCTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGCGAGGCCTGCGCGGGGACAGCCACGCCATGGTTAAGATGCTCATCACCTACGTCGACAACCTCCCCACCGGAAATGAACAGGGGTTGTTTTATGCATTGGATCTTGGAGGAACCAACTTCCGCGTCCTGCGAGTCCAAC TCGGTGGCAAGGAGAAACGTGTCGT CCAACAACAGTACGA GGAAG TC TCAA TTCCACCACATCTGATGGTTGGAAC TTCCATGGAACTG TTTGATTTTATTGCTTCTGCATTGTCAAAATTTGTTGATAC TGAAGGTGATGATTTCCA CCTCCCAGAAGGGAGACAGAGAGAGC TGGGCTTCACCTTTTCCTTCCCAGTGAGCCAGACATCAATATCGTCAGGAACGCTCATCAAGTGGACAAAGGGTTTCTCCATCAATGACGCGGTTGGCGAAGATGTTGTATCTGAGTTGGGCAAGGCCATGGAGAGGCAGGGATTAGATATGAAAATTGCAGCATTGGTTAATGACACTGTCGGCACATTGGCTGGTGGGAGGTATGCGGATAACAGTGTTGTTGCTGCTATAATATTGGGCACTGGTACAAATGCAGCATATGTTGAGAATGCTAATGCAATTCCTAAATGGACCGGTTTACTGCCTAGGTCCGGAAATATGGT AATCAACACAGAATGGGGGAGCTTTAAATCAGATAAGCTTCCTCTTTCAGAATTCGATAAAGCAATGGATTTTGAAAGCTTGAATCCTGGAGAGCAGATATATGAAAAGTTGATTTCTGGCATGTATCTTGGAGAGATAGTGCGAAGAATCTTGCTGAAGCTTGCTCATGATGCAGCTTTGTTTGGGGATGTTGTTCCATCTAAGCTAGAGCAACCGTTTGTACTAAGGACACCGGATATGTCAGCCATGCATCATGACTCGTCACATGACCTTAAAACTGTTGGAGCTAAGCTAAAGGATATCGTCGGGGTCCCAGATACTTCCCTGGAAGTAAGATACATTACCAGTCACATTTGTGACATAGTTGCAGAGCGTGCTGCACGCTTGGCTGCTGCTGGCATATATGGGGTCCTAAAGAAGCTAGGTCGGGACAAGATGCCAAAAGACGGCAGTAAGATGCCTAGGACTGTCATTGCCTTGGATGGTGGGCTCTATGAACATTACAAGAAGTTCAGCAGTTGCTTAGAATCAACTCTAACAGACCTTCTTGGGGATGATGTCTCGTCTTCGGTGGTTACCAAGCTGGCCAACGATGGTTCTGGCATTGGAGCTGCTCTTCTCGCAGCCTCGCACT CCCAGTATG C CGAGATCGACTAGCTTTAAGGATGATCTTGATGAATGATGAATCAAACTCCGTTTGTAGGTTCTCATTTCCCCCTTCAAAAT CCACATAATACTCCTGGCTCCCCCCTTGAAATCTTACCATCTTTTTTTGGCTATTCTGA GGG CAAACA TAAGTG CCTCTG CAGCGGGATATAGCTAGTATAGCGCCAATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACA GGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGAGAACCAAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTCTTGTTTGATCTCATAAAAAAAAAAAAAAAAAA ]
[+] EMBL CB634665 [ TGGAGGCAGCCGCGGCGGAGAGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGAGCACGCGCTGTCGACCCCGACGGCGCTGCTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGCGAGGCCTGCGCGGGGACGGCCACGCCATGGTCAAGATGCTTATCACCTACGTCGACAACCTCCCCACCGGAAATGAACAGGGGTTGTTTTATGCATTGGATCTTGGAGGAACCAACTTCCGCGTCCTGCGAGTCCAAC TCGGTGGCAAGGAGAAACGTGTCGT CCAACAACAGTACGA GGAAG TC TCAA TTCCACCACATCTGATGGTTGGAAC TTCCATGGAACTG TTTGATTTTATTGCTTCTGCATTGTCAAAATTTGTTGATAC TGAAGGTGATGATTTCCA CCTCCCAGAAGGGAGACAGAGAGAGC TGGGCTTCACCTTTTCCTTCCCAGTGAGCCAGACATCAATATCGTCAGGAACGCTCATCAAGTGGACAAAGGGTTTCTCCATCAATGACGCGGTTGGCGAAGATGTTGTATCTGAGTTGGGCAAGGCCATGGAGAGGCAGGGATTAGATATGAAAATTACAGCATTGGTTAATGACACTGTCGGCACATTGGCTGGTGGGAGGTATGCGGATAACAGTGTTGTTGCTGCTATAATATTGGGCACTGGTACAAATGCAGCATATGTTGAGAATGCTAATGCAATTCCTAAATGGACCGGTTTACTGCCTANGTCCGGAAATATGGTAAATC ACACAGAATGGGGGAGCTTTAAATCAGATAAGCTTCCTCTTTCAGAATTCGATAAAGCAATGGATTTTGAAAG ]
[+] EMBL AU064311 [ AGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGAGCACGCGCTGTCGACCCCGACGGCGCTGCTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGCGAGGCCTGCGCGGGGACAGCCACGCCATGGTTAAGATGCTCATCACCTACGTCGACAACCTCCCCACCGGAAATGAACAGGGGTTGTTTTATGCATTGGATCTTGGAGGAACCAACTTCCGCGTCCTGCGAGTCCAAC TCGGTGGCAAGGAGAAACGTGTCGT CCAACAACAGTACGA GGAAG TC TCAA TTCCACCACATCTGATGGTTGGAACTTTCCATGGAACTGTTTTGATTTTATTGCTTCTGCATTGTCAAAATTTGTTGATACTTGAAGGTGATGATTTCCACCCTCCCAGAAGGGAGACAAAGAGAGCTTGGGTTTAACTTTTTCCT ]
[+] EMBL AU164178 [ AGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGAGCACGCGCTGTCGACCCCGACGGCGCTGCTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGCGAGGCCTGCNCGGGGACAGCCACGCCATGGTTAANATGCTCATCACCTACGTCGACAACCTCCCCACCGGAAATNAACAGGGGTTGTTTTATGCATTGGNTCTTGGAGGAACCAACTTCCGCGTCCTGCGAGTCCAAC TCGGTGGCAAGGAGAAACGTGTCGT CCAACAACAGTACGA GGAAG TC TCAA TTCCACCACATCTGATGGTTGGAAC TTCCATGGAACTG TTTGATTTTATTGCTTCTGCATTGTCAAAATTTGTTGATAC TTAAGGTGATGATTTCCA CCTTCCAGAAGGGAGACAGAGAGAGCTTGGGTTTAACCTTTTTCCTNCCAGTG ]
[+] EMBL AU091928 [ AGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGNGCACGCGCTGTCGACCCCGACGGCGCTGCTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGCGAGGCCTGCGCGGGGACAGCCACGCCATGGTTAAGATGCTCATCACCTACGTCGACAACCTCCCCACCGGAAATGAACAGGGGTTGTTTTATGCATTGGATCTTGGAGGAACCAACTTCCGCGTCCTGCGAGTCCAAC TCGGTGGCAAGGAGAAACGTGTCGT CCAACAACAGTACGA GGAAG TC TCAA TTNCACCACATCTGATGGTTGG AC TTCCATGG ACTG TTTGATTTTATTGCTTCTGCATTGTCAAAATTTGTTGATAC TG AGGTGATGAT ]
[+] EMBL AU164259 [ AGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGNGCACGCGCTGTCGACCCCGACGGCGCTGCTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGCGAGGCCTGCGCGGGGACAGCCACGCCATGGTTAAGATGCTCATCACCTACGTCGACAACCTCCCCACCGGAAATGAACAGGGGTTGTTTTATGCATTGGATCTTGGAGGAACCAACTTCCGCGTCCTGCGAGTCCAACTTCGGTGGCAAGGAGAAACGTGTCGTNCCAACAACAGTACGAGGGAAG TCTTCAATTTCCACCACATC ]
[+] EMBL AU182675 [ AGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGAGCACGCGCTGTCGACCCCGACGGCGCTGNTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGCGAGGCCTGCGCGGGGACTTTNACGCCATGGTTAANATGCTCATCACCTACGTCGACAACCTCCCCACCGGAAATGAACAGGGGTTGTTTNATGCATTGGATCTTGGAGGAACCAACTTCCGCGTCCTGCGAGTCCAAC TCGGTGGCAAGGAGAAACGTGTCGT CCAACAACAGTNCGA GGAAGTTC TNAA T ]
[+] EMBL CA999334 [ TGGAGAGCAGATATATGAAAAGTTGATTTCTGGCATGTATCTTGGAGAGATAGTGCGAAGAATCTTGCTGAAGCTTGCTCATGATGCAGCTTTGTTTGGGGATGTTGTTCCATCTAAGCTAGAGCAACCGTTTGTACTAAGGACACCGGATATGTCAGCCATGCATCATGACTCGTCACATGACCTTAAAACTGTTGGAGCTAAGCTAAAGGATATCGTCGGGGTCCCAGATACTTCCCTGGAAGTAAGATACATTACCAGTCACATTTGTGACATAGTTGCAGAGCGTGCTGCACGCTTGGCTGCTGCTG ]
[-] EMBL CB683495 [ TTAAAACTGTTGGAGCTAAGCTAAAGGATATCGTCGGGGTCCCAGATACTTCCCTGGAAGTAAGATACATTACCAGTCACATTTGTGACATAGTTGCAGAGCGTGCTGCACGCTTGGCTGCTGCTGGCATATATGGGGTCCTAAAGAAGCTAGGTCGGGACAAGATGCCAAAAGACGGCAGTAAGATGCCTAGGACTGTCATTGCCTTGGATGGTGGGCTCTATGAACATTACAAGAAGTTCAGCAGTTGCTTAGAATCAACTCTAACAGACCTTCTTGGGGATGATGTCTCGTCTTCGGTGGTTACCAAGCTGGCCAACGATGGTTCTGGCATTGGAGCTGCTCTTCTCGCAGCCTCGCACT CCCAGTATG C CGAGATCGACTAGCTTTAAGGATGATCTTGATGAATGATGAATCAAACTCCGTTTGTAGGTTCTCATTTCCCCCTTCAAAAT CCACATAATACTCCTGGCTCCCCCCTTGAAATCTTACCATCTTTTTTTGGCTATTCTGA GGG CAAACA TAAGTG CCTCTG CAGCGGGATATAGCTAGTATAGCGCCAATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACA GGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGAGAACCAAGATTTTTTTGCTCTGTATTTGGTCTTCGTAATAAAGAAGGGGACATAATCTAAaaaaaaaga ]
[+] EMBL CB683357 [ TAAGCCTTAGGATATCGTCGGGGTCCCAGATACTTCCCTGGAAGTAAGATACATTACCAGTCACATTTGTGACATAGCTGCAGAGCGTGCTGCACGCTTGGCTGCTGCTGGCATATATGGGGTCCTAAAGAAGCTAGGTCGGGACAAGATGCCAAAAGACGGCAGTAAGATGCCTAGGACTGTCATTGCCTTGGATGGTGGGCTCTATGAACATTACAAGAAGTTCAGCAGTTGCTTAGAATCAACTCTAACAGACCTTCTTGGGGATGATGTCTCGTCTTCGGTGGTTACCAAGCTGGCCAACGATGGTTCTGGCATTGGAGCTGCTCTTCTCGCAGCCTCGCACT CCCAGTATG C CGAGATCGACTAGCTTTAAGGATGATCTTGATGAATGATGAATCAAACTCCGTTTGTAGGTTCTCATTTCCCCCTTCAAAAT CCACATAATACTCCTGGCTCCCCCCTTGAAATCTTACCATCTTTTTTTGGCTATTCTGA GGG CAAACA TAAGTG CCTCTG CAGCGGGATATAGCTAGTATAGCGCCAATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAACAGACTAACAGGGAAATGGAGGCACA GGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCC ]
[+] EMBL C99523 [ AGCANTTGCTTAGAATCAACTCTAACAGACCTTCTTGGGGATGATGTCTCGTCTTCGGTGGTTNCCAAGCTGGCCAACGATGGTTCTGGCATTGGAGCTGCTCTTCTCGCAGCCTCGCACT CCCAGTATG C CGAGATCGACTAGCTTTAAGGATGATCTTGATGAATGATGAATCAAACTCCGTTTGTAGGTTCTCATTTCCCCCTTC AAAT CCACAT ATACTCCTGGCTCCCCCCTTGAAATCTTACC TCTTTTTTTGGCTATTCTGA GGG CAAACA TAAGTG CCTCTG CAGCGGGATATAGCTAGTATAGCGCCAATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACA GGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGAGAACCAAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTCTTGTTTGATCTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C99674 [ TTCTTGGGGATGATGTCCCGTCTTCGGTGGTTACCAAGCTGGCCAACGATGGTTCTGGCATTGGAGCTGCTCTTCTCGCAGCTTCGCACT CCCAGTATGCC CGAGATCGACTAGCTTTAAGGATGATCTTGATGAATGATGAATCAAACCCCGTTTGTAGGTTCTCATTTCCCCCTTC AAAT CCACATAATACTCCTGGCT CCCCCTTGAAATCTTACCATCTTTTTTTGGCTATTCTGA GGG CAAACA TAAGTG CCTCTG CAGCGGGATATAGCTAGTATAGCGCCAATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACA GGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGAGAACCAAGATTTTTTTGCTCTGTATTTTCTCTTCGTAANCCNNAAGGGGACATAATCTAATTGCTCTTGTTTGATCTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C99710 [ CGCAGCCTCGNACTCCCCAGTATN CACAAGATCGACTAGCTTTAAGGATGATCTTGATG ATGATGAATCAAA TCCGTTTGTAGGTTCTCATTTCCCCCTTCAAAATCCCACATAATACTCCTGGCTCCCCCCTTGAAATCTTNCC TCTTTTTTTGGCTATTCTGA GGG CAAACA TAAGTG CCTCTG CAGCGGGATATAGCTAGTATAGCGCCAATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACA GGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGAGAACCAAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTCTTGTTTGATCTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C99573 [ TTGGCTATTCTGA GGG CAAACA TAAGTG CCTCTG CAGCGGGATATAGCTNGTATAGCGCCAATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACA GGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGAGAACCAAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTCTTGTTTGATCTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BQ908878 [ TCTGACGGGCCACAACCACTAAGTGCCCTCTGCCAGCGGGATATAGCTAGTATAGCGCCCATGAGTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACACGGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGAT TTGAGAACCAAGATTTTTTTGCTC GTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTC TGTTTGATCTCATAAAAAAAAAA ]
consensusID : consensus_14812#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 309 fasta sequence
[CAGGATTCGGCACGAGCCCCTTCAAAATCCACATAATACTCCTGGCTCCCCCCTTGAAATCTTACCATCTTTTTTTGGCTATTCTGAGGGCAAACATAAGTGCCTCTGCAGCGGGATATAGCTAGTATAGCGCCAATGANTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGANGCACAGGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGANAACCAAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAANGG]
[+] EMBL AA753037 [CAGGATTCGGCACGAGCCCCTTCAAAATCCACATAATACTCCTGGCTCCCCCCTTGAAATCTTACCATCTTTTTTTGGCTATTCTGAGGGCAAACATAAGTGCCTCTGCAGCGGGATATAGCTAGTATAGCGCCAATGANTTTGGAGGTTTTCTAATGGCATAAAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGANGCACAGGCAATTTCCATTCCTGTTCTGTCAGATTCTTTTCCCCCTTAATTGATGTTGANAACCAAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAANGG]
consensusID : consensus_14812#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 297 fasta sequence
[TAATTGCTGAGGGNCACAACCACGTACAGGTGCCTGCTGCGCAAGCCGGGAATAATAGCTAGTATTACGACGCCCACATGAGTTTTGGAGGTTTATTCTAATGGCATAATAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACAGGCCAATTTCCATTCCTGTTCTGTCAGATTCTTNTTCCCCCTTAATTGATGTTGAGAACCCAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTCTTGTTTGATCTCAAAAAAAAAA]
[+] EMBL BQ907247 [TAATTGCTGAGGGNCACAACCACGTACAGGTGCCTGCTGCGCAAGCCGGGAATAATAGCTAGTATTACGACGCCCACATGAGTTTTGGAGGTTTATTCTAATGGCATAATAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACAGGCCAATTTCCATTCCTGTTCTGTCAGATTCTTNTTCCCCCTTAATTGATGTTGAGAACCCAGATTTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTCTTGTTTGATCTCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14812#0 TACGCGGCCGGAGAGAGGAGGGGGGAAGAGAGGATCTCGCAGAGCGCCATAGCCTCGGAT 60
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 CCAGAAGCGGAATTCGGTGGAGGTCTCGGGCACCTGGATCGATCGGAGGAAGGGAAGGCG 120
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 GAGCAGCGGTGATGGGGAAGGCGGCGGCGGTGGGGACGGCGGTGGTGGTGGCCGCGGCGG 180
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 TCGGGGTGGCGGTGGTGCTGGCGCGGAGGCGGAGGAGGAGGGACCTGGAGCTGGTGGAGG 240
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 GAGCCGCGGCGGAGAGGAAGAGGAAGGTGGCGGCGGTGATCGAGGACGTGGAGCACGCGC 300
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 TGTCGACCCCGACGGCGCTGCTGCGGGGCATCTCGGACGCCATGGTCACCGAGATGGAGC 360
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 GAGGCCTGCGCGGGGACAGCCACGCCATGGTTAAGATGCTCATCACCTACGTCGACAACC 420
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 TCCCCACCGGAAATGAACAGGGGTTGTTTTATGCATTGGATCTTGGAGGAACCAACTTCC 480
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 GCGTCCTGCGAGTCCAACTCGGTGGCAAGGAGAAACGTGTCGTCCAACAACAGTACGAGG 540
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 AAGTCTCAATTCCACCACATCTGATGGTTGGAACTTCCATGGAACTGTTTGATTTTATTG 600
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 CTTCTGCATTGTCAAAATTTGTTGATACTGAAGGTGATGATTTCCACCTCCCAGAAGGGA 660
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 GACAGAGAGAGCTGGGCTTCACCTTTTCCTTCCCAGTGAGCCAGACATCAATATCGTCAG 720
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 GAACGCTCATCAAGTGGACAAAGGGTTTCTCCATCAATGACGCGGTTGGCGAAGATGTTG 780
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 TATCTGAGTTGGGCAAGGCCATGGAGAGGCAGGGATTAGATATGAAAATTGCAGCATTGG 840
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 TTAATGACACTGTCGGCACATTGGCTGGTGGGAGGTATGCGGATAACAGTGTTGTTGCTG 900
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 CTATAATATTGGGCACTGGTACAAATGCAGCATATGTTGAGAATGCTAATGCAATTCCTA 960
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 AATGGACCGGTTTACTGCCTAGGTCCGGAAATATGGTAATCAACACAGAATGGGGGAGCT 1020
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 TTAAATCAGATAAGCTTCCTCTTTCAGAATTCGATAAAGCAATGGATTTTGAAAGCTTGA 1080
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 ATCCTGGAGAGCAGATATATGAAAAGTTGATTTCTGGCATGTATCTTGGAGAGATAGTGC 1140
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 GAAGAATCTTGCTGAAGCTTGCTCATGATGCAGCTTTGTTTGGGGATGTTGTTCCATCTA 1200
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 AGCTAGAGCAACCGTTTGTACTAAGGACACCGGATATGTCAGCCATGCATCATGACTCGT 1260
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 CACATGACCTTAAAACTGTTGGAGCTAAGCTAAAGGATATCGTCGGGGTCCCAGATACTT 1320
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 CCCTGGAAGTAAGATACATTACCAGTCACATTTGTGACATAGTTGCAGAGCGTGCTGCAC 1380
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 GCTTGGCTGCTGCTGGCATATATGGGGTCCTAAAGAAGCTAGGTCGGGACAAGATGCCAA 1440
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 AAGACGGCAGTAAGATGCCTAGGACTGTCATTGCCTTGGATGGTGGGCTCTATGAACATT 1500
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 ACAAGAAGTTCAGCAGTTGCTTAGAATCAACTCTAACAGACCTTCTTGGGGATGATGTCT 1560
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 CGTCTTCGGTGGTTACCAAGCTGGCCAACGATGGTTCTGGCATTGGAGCTGCTCTTCTCG 1620
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 CAGCCTCGCACTCCCAGTATGCCGAGATCGACTAGCTTTAAGGATGATCTTGATGAATGA 1680
consensus_14812#1 ------------------------------------------------------------
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 TGAATCAAACTCCGTTTGTAGGTTCTCATTTCCCCCTTCAAAATCCACATAATACTCCTG 1740
consensus_14812#1 ----------------CAGGATTCGGCACGAGCCCCTTCAAAATCCACATAATACTCCTG 44
consensus_14812#2 ------------------------------------------------------------
consensus_14812#0 GCTCCCCCCTTGAAATCTTACCATCTTTTTTTGGCTATT-CTGAGGGCAAACATAAG-TG 1798
consensus_14812#1 GCTCCCCCCTTGAAATCTTACCATCTTTTTTTGGCTATT-CTGAGGGCAAACATAAG-TG 102
consensus_14812#2 ---------------------TAATTGCTGAGGGNCACAACCACGTACAGGTGCCTGCTG 39
* * * ** * * * ** * **
consensus_14812#0 CCTCTGCAGCGGGATATAGCTAGTATAGCGCCA-----ATGAGTTT-GGAGGTTT--TCT 1850
consensus_14812#1 CCTCTGCAGCGGGATATAGCTAGTATAGCGCCA-----ATGANTTT-GGAGGTTT--TCT 154
consensus_14812#2 CGCAAGCCGGGAATAATAGCTAGTATTACGACGCCCACATGAGTTTTGGAGGTTTATTCT 99
* ** * * *********** ** * **** *** ******** ***
consensus_14812#0 AATGGCATAA-AACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACAGGC-A 1908
consensus_14812#1 AATGGCATAA-AACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGANGCACAGGC-A 212
consensus_14812#2 AATGGCATAATAACGTTGGATGGCAGTAGCAGACTAACAGGGAAATGGAGGCACAGGCCA 159
********** ************************************** ******** *
consensus_14812#0 ATTTCCATTCCTGTTCTGTCAGATTCTTTT-CCCCCTTAATTGATGTTGAGAACCAAGAT 1967
consensus_14812#1 ATTTCCATTCCTGTTCTGTCAGATTCTTTT-CCCCCTTAATTGATGTTGANAACCAAGAT 271
consensus_14812#2 ATTTCCATTCCTGTTCTGTCAGATTCTTNTTCCCCCTTAATTGATGTTGAGAACCCAGAT 219
**************************** * ******************* **** ****
consensus_14812#0 TTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTCTTGT 2027
consensus_14812#1 TTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAANGG---------------------- 309
consensus_14812#2 TTTTTTGCTCTGTATTTTCTCTTCGTAATAAAGAAGGGGACATAATCTAATTGCTCTTGT 279
*********************************** **
consensus_14812#0 TTGATCTCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2084
consensus_14812#1 ---------------------------------------------------------
consensus_14812#2 TTGATCTCAAAAAAAAAA--------------------------------------- 297
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||