These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14821#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1575 fasta sequence [AAGCAAACGGAGGAGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT-CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC-TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT-GAAGAAAACCTTGAAATGGCGTTCAGAGTA-TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK066184 [AAGCAAACGGAGGAGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCG AGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGGAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGGAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGAC ] [+] EMBL AK062267 [ GGAGGAGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGT ] [+] EMBL CF303547 [ AGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCG AGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATGTGGTATACTGTATGGAGAATGCAATTCTGAAT ] [+] EMBL CB646276 [ GAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACT ACAAGATCATGGAAGACCTTTTT ACATGGAAGAA TAGAATCTGCATTTGGTGGCAAAAA CAGG ] [+] EMBL OSC111601 [ AAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCG GTACCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGCTTTCGATTGCGAGGTACCTGGTAGCGAGGAACTTGGAAGTGAAGAAGGNCACGAAAATGCTNGAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGA ] [+] EMBL OSS2415A [ ACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCG GT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGGAGGCCACGAAAATGTT GAAGGAAACCTTGAAATGGCGTTCAGAGTATTAAGCCAGATGAGNTCCGTTTGGGTTAGGTAGCAAACG AGTTGCAACTGG AAAATNTACCG ACTG TTTCTTTTACAA ] [+] EMBL CB625749 [ ACGCCTGGGCTGAGAACCCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAAGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAA ] [+] EMBL CB649219 [ CCGACCACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGT CCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGC TTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCT GAAGAAAACCTTGAAATGGCGTTCAGAGTA TAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTAT ] [+] EMBL CF331384 [ TGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCGTCTGANAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGAC ] [-] EMBL CB649220 [ TTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAAAAAAAAAAAAga ] [-] EMBL CB646099 [ TTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAATTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACA ] [+] EMBL AU166334 [ AAGAAACAGTGGCTGTATTTGCCAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCNCCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTNTCAGCTCTCACCAANAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTNGTGACCTCATTTGAGAACCCTTTCGCAACAATATNTGCCAGATGATAAATAACAGCACGACACTTTGTTGCA AAAAAAAAAAAAAAAA ] [-] EMBL CF331385 [ AAAAAGAGCTTGAATTTGAAAATGGGAAAGCCGCAGTGATTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCCCCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTTTCAGCTTTCACCAAGAGATGAACCCCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTGGGCACCACCATCCCAACCTTGGTGACCTCATTTGAGAACCCTTTCGCAACAATATTTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL CA756015 [ CTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCANAANAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CA756094 [ CTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCNNAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_14821#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 805 fasta sequence [TGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGCCAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCCCCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACCCCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAATCCTTTTTTTTTTCGAATCGGAGAAATGTTTTCTGCTTTCTTTGAACAACGTTGCAATAGAAAACTGTTTACTGCTTTCTTGCCTAAAAAGGAA] [-] EMBL CB652451 [TGCAAGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTTGCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTGAAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGGGAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAAGAAACAGTGGCTGTATCTGCCAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAAGCCGCAGTGACTTCATCAAACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCCCCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACCCCAAATGTTAACTAGAAACGCTTTAACACACAGCAGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAATCCTTTTTTTTTTCGAATCGGAGAAATGTTTTCTGCTTTCTTTGAACAACGTTGCAATAGAAAACTGTTTACTGCTTTCTTGCCTAAAAAGGAA] consensusID : consensus_14821#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 786 fasta sequence [CTGGGCCCTTTAAGCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGTCCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGCTTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCTGAAGAAAACCTTGAAATGGCGTTCAGAGTATAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGG] [+] EMBL CB652450 [CTGGGCCCTTTAAGCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGTCCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGCTTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCTGAAGAAAACCTTGAAATGGCGTTCAGAGTATAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGTCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAGACTAACAAGATCATGG] consensusID : consensus_14821#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 430 fasta sequence [ACTTCATCACATACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTANAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCATGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAATCCTTTTTTTTTTCGAAGAAAAAAAAAA] [+] EMBL BI806895 [ACTTCATCACATACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTANAAGGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCATGAATACCACCATGAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCAAGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCATGGAATGTGTTGCCTGACTTGTTTTGTAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGAACCCTTTCGCAACAATATCTGCCAGATGATAAATAACAGCACGACACTTTGTTGCACTCAGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAATCCTTTTTTTTTTCGAAGAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 AAGCAAACGGAGGAGGAACTGAGGAAGACGCCTGGGCTGAGAACCCGAAGAAGCCCGACG 60 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 ACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCACCGCGCGCGCGCGTCCCGTCTCGCCG 120 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 AGGTAGTAACAAAAGGACACTATGAGCTCCGCAAGCGGTGTGAACAATGGTGATGGAAAA 180 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 GAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGATTGGTGAAGTTAGAGCTGCCCTAGGA 240 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 CAACTATCAGGAAAAGCTGCGCTATATTGCTCAGATGCTTCGATTGCGAGGTACCTGGTA 300 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 GCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAATGCTGAAGAAAACCTTGAAATGGCGT 360 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 TCAGAGTATAAGCCAGATGAGATCCGTTGGGATGAGATAGCAAACGAAGCTGCAACTGGA 420 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 AAAATCTACCGAACTGATTACTTTGACAAGAGTGGACGGAGTATTCTTGTCATGAGACCT 480 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 GGAGTTCAGAATACCAAGAAGGCCAAGGGGCAGATCAGATATTTGGTATACTGTATGGAG 540 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 AATGCAATTCTGAATCTTCCGCATGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCT 600 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 GGATTCTCATTATCTAACATATCACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAA 660 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 GGTCACTATCCTGAAAGATTGGGTGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAG 720 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 TCTTTCTGGAAGATCGCAAGCCCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTT 780 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 ------------------------------------------------------------ consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 GTATACCCAGATAGGCCTGAGACTAACAAGATCATGGAAGACCTTTTTAACATGGAAGAA 840 consensus_14821#2 ------------------------------------------------------------ consensus_14821#1 --------------------------------------------------------TGCA 4 consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 TTAGAATCTGCATTTGGTGGCAAAAACCAGGCTACTTTTAACATAAATGATTATGCTGCA 900 consensus_14821#2 --------------------------------------------------------CTGG 4 consensus_14821#1 AGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTT 64 consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 AGGATGAGAGAAGATGACATCAAGATGCCATTGTTCTGGAGTCCTGAAAATTCTGCTCTT 960 consensus_14821#2 GCCCTTTAAGCGAAGAAGCCCGACGACTCCGGAATCGGGGGCTCGGGCAGTCGAGCTCAC 64 consensus_14821#1 GCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTG 124 consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 GCTTCAGAGCCATATGTGATGGTGAACAAGGACATGGCACAAGAAGGTAGTTCAGGTTTG 1020 consensus_14821#2 CGCGCGCGCGCGTCCCGTCTCGCCGAGGTAGTAACAAAAGGACACTATGAGCTCCGCAAG 124 consensus_14821#1 AAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGG 184 consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 AAGAGTGAAGAGACTGCATCTGAAAAGAGGGAAGAAACAGATACTGAATCTGAAAACAGG 1080 consensus_14821#2 CGGTGTGAACAATGGTGATGGAAAAGAAGCGGCACTGTTTGAGCAGCGGCTATCCAAGAT 184 consensus_14821#1 GAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAA 244 consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 GAAGAAACAGAGAGTGAATCTGAGAGGGCAGAAATAGACTCTGTATCTGGGAAGAGGGAA 1140 consensus_14821#2 TGGTGAAGTTAGAGCTGCCCTAGGACAACTATCAGGAAAAGCTGCGCTATATTGCTCAGA 244 consensus_14821#1 GAAACAGTGGCTGTATCTGCCAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAA 304 consensus_14821#3 ------------------------------------------------------------ consensus_14821#0 GAAACAGTGGCTGTATCTGACAAGAGAGAAGAAAAAGAGACTGAATCTGAAAATGGGAAA 1200 consensus_14821#2 TGCTTCGATTGCGAGGTACCTGGTAGCGAGGAACTGGGAAGTGAAGAAGGCCACGAAAAT 304 consensus_14821#1 GCCGCAGTGACTTCATCAAA--CGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAA- 361 consensus_14821#3 ---------ACTTCATCACATACGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTANAA 51 consensus_14821#0 GCCGCAGTGACTTCATCAAA--CGGAGTTGAGCTGACAAGCTTGCCAGGCGAAGGTAAA- 1257 consensus_14821#2 GCTGAAGAAAAC-CTTGAAA--TGGCGTTCAGAGTATAAG----CCAGATGAGATCCGTT 357 * * * * * ** *** ** * *** **** ** consensus_14821#1 GGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCA--TGAATACCCCCAT 419 consensus_14821#3 GGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCA--TGAATACCACCAT 109 consensus_14821#0 GGTATAACCCCGGCAGATTGAAGTGTCTGTTCATCGTCTGATCCA--TGAATACCACCAT 1315 consensus_14821#2 GGGATGAGAT-AGCAAACGAAGCTGCAACTGGAAAAATCTACCGAACTGATTACTTTGAC 416 ** ** * *** * * ** * * * * * *** *** * consensus_14821#1 GAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCA 479 consensus_14821#3 GAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCA 169 consensus_14821#0 GAAAAATGCAAGCCAACTGTTGATATGAACTCCAACACAGTGAATTCTCAGCTCTCACCA 1375 consensus_14821#2 AAGAGTGGACGGAGTATTCTTGTCATGAGACCTGGAGTTCAGAATACCAAGAA--GGCCA 474 * * * * * * *** **** * **** * ** *** consensus_14821#1 AGAGATGAACCCCAAATGTTAACTAGAAACGCTTTAACACACAGCA-GGAATGTGTTGCC 538 consensus_14821#3 AGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCATGGAATGTGTTGCC 229 consensus_14821#0 AGAGATGAACACCAAATGTTAACTAGAAACGCTTTAACACACAGCA-GGAATGTGTTGCC 1434 consensus_14821#2 AGGGGCAGAT--CAGATATTTGGTATACTGTATGGAGAATGCAATTCTGAATCTTCCGCA 532 ** * * ** ** ** ** * * * * ** **** * ** consensus_14821#1 TGACTTGTTTTG--TAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGA-ACC 595 consensus_14821#3 TGACTTGTTTTG--TAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGA-ACC 286 consensus_14821#0 TGACTTGTTTTG--TAGTCGGCACCACCATCCCAACCTTCGTGACCTCATTTGAGA-ACC 1491 consensus_14821#2 TGACCAGAGTCAGATGGTTTGGCTCATTGATTTTGCTGGATTCTCATTATCTAACATATC 592 **** * * * ** * ** * * * * ** * * * * * consensus_14821#1 CTTTC--GCAACAATATCTGC--CAGATGATAAATAACAGCACGACACTTTGTTGCACTC 651 consensus_14821#3 CTTTC--GCAACAATATCTGC--CAGATGATAAATAACAGCACGACACTTTGTTGCACTC 342 consensus_14821#0 CTTTC--GCAACAATATCTGC--CAGATGATAAATAACAGCACGACACTTTGTTGCACTC 1547 consensus_14821#2 ACTTCATGTGACAAAGTTGACAGCAGATGTCCTACAAGGTCACTATCCTGAAAGATTGGG 652 *** * **** * * ****** * ** *** * ** consensus_14821#1 AGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAA 711 consensus_14821#3 AGTTTCCTCCTGTCATTTCTCTCGAGGGTTTATTCACTTACTGCCTGCTATATCTTGCAA 402 consensus_14821#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------------------- 1575 consensus_14821#2 TGTTGCAATTCTTTACAATGCTCCTAAGTTTTTTGAGT--CTTTCTGGAAGATCGCAAGC 710 * consensus_14821#1 TCCTTTTTTTTTTCGAATCGGAGAAATGTTTTCTGCTTTCTTTGAACAACGTTGCAATAG 771 consensus_14821#3 TCCTTTTTTTTTTCGAAGAAAAAAAAAA-------------------------------- 430 consensus_14821#0 ------------------------------------------------------------ consensus_14821#2 CCCATTCTTGAGCCAAAGACTTTCAACAAGGTCAAATTTGTATACCCAGATAGGCCTGAG 770 consensus_14821#1 AAAACTGTTTACTGCTTTCTTGCCTAAAAAGGAA 805 consensus_14821#3 ---------------------------------- consensus_14821#0 ---------------------------------- consensus_14821#2 ACTAACAAGATCATGG------------------ 786 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||