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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14840#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 663 fasta sequence
[TTTTTTCNTTTTTTTTTNTTNTTTCCCCTTTTTTTTTTTTTACGAAAGATGCTCA-TTAATTTCCCAGATTCT-GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGAC]
[-] EMBL AU070930 [TTTTTTCNTTTTTTTTTNTTNTTTCCCCTTTTTTTTTTTTTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCAT ]
[-] EMBL CB685755 [ tggTTTTCTGTAGTGTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTATTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTGTGCTTCGCCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGGGGCC ]
[-] EMBL BM419747 [ TTTTTTTTTTACGAAAGATGCTCA TTAATTTCCCAGATACT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACNGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAcgg ]
[+] EMBL CF311133 [ TTTTTTGTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGA ACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATT ]
[-] EMBL AU166299 [ TTTTTGTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCT ]
[+] EMBL CF280446 [ TTTTACGAAAGATGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTTCTTATATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCA TTTTTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGAT ]
[-] EMBL AU070745 [ AAAGATGCTCATTTAATTTCCCAGATTCTGGGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCAT ]
[+] EMBL CB633657 [ AAGATGCTCA TTAATTTCCCAGATACC GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA ]
[+] EMBL CB649237 [ AGATGCTCA TTAATTTCCCAGCCTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA ]
[-] EMBL AK060032 [ TGCTCA TTAATTTCCCAGATTCT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGAC]
[+] EMBL CB626850 [ CTCA TTAATTTCCCAGATACT GGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGGATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTGGAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA ]
[+] EMBL BI118675 [ ACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA ]
[-] EMBL AA754581 [ AAAAGATCGGT GTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCTTCGGCCNTGGTGCTCTCCACCCATTNGGCATNGATCCTCACTCTCTNGATGNTCNGCTTCACCGTCCTCGCGATGTNGGCTTTCGTCNTGCTCTGGAAGAANTCNTCNGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGNTGCACCGACTCNTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGAC]
[-] EMBL AA750407 [ GAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCT CCTCAGGTGAC]
consensusID : consensus_14840#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence
[TTTTTTTTTTGGCATCTATCAAACTGACATAACCGGGAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTGGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGGGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCGTGGGGCTCTCCACCCATTGGGCATTGATCCTCACTCTCTCGATGCTCGGGTTCACCGTCCTCGCGATGTTGGCCTTCGTCCGGGCTCTGTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGGGGGGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGGGTCTGAAAGGTAGTCCCACTTTTCCTTCAACCAGGTCCAGGCACCTCAGTGTCCCGTGTGACCGACTCCTCTAAGCAAAAATATAGAGTCCTG]
[-] EMBL BI812006 [TTTTTTTTTTGGCATCTATCAAACTGACATAACCGGGAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTGGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGGGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCGTGGGGCTCTCCACCCATTGGGCATTGATCCTCACTCTCTCGATGCTCGGGTTCACCGTCCTCGCGATGTTGGCCTTCGTCCGGGCTCTGTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGGGGGGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGGGTCTGAAAGGTAGTCCCACTTTTCCTTCAACCAGGTCCAGGCACCTCAGTGTCCCGTGTGACCGACTCCTCTAAGCAAAAATATAGAGTCCTG]
consensusID : consensus_14840#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence
[TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCTCACTAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACAGGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAAAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAACGGTGAGACGGTGGTGGAAACAAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA]
[+] EMBL CB679711 [TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCTCACTAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACAGGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAAAAATTTCCTTGAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAACGGTGAGACGGTGGTGGAAACAAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCACCTCAGGTGA]
consensusID : consensus_14840#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 486 fasta sequence
[TTTTTTTTTTTTTTAACCTGGAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGTGACGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCC]
[-] EMBL BI812087 [TTTTTTTTTTTTTTAACCTGGAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGTCCTCGCGATGTTGGCCTTCGTCCTGCTCTTGAAGAACTCCTCCGCGTCGTCGCCCATTTCATCGGTGCGCAGCGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAACCATGTCCATGCCACCTCATGTCCCGTGACGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCC]
consensusID : consensus_14840#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 466 fasta sequence
[TTTTTTTTTTGGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGGTCCTCGGCGATGTTGGCCTTCGGTCCGTGGCTCTTGAAGAACTCCTCCGGCGATCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAAGCCATGTCCATGCCACCTCATGTCCCGGTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCAGNCTACAGGTGACAGCA]
[-] EMBL BQ908130 [TTTTTTTTTTGGGTCGTCTAACCCACCAAGTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCAGGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATGCCCAGGTTAGCCTCGGCCCTGGTGCTCTCCACCCATTGGCATTGATCCTCACTCTCTCGATGCTCTGCTTCACCGGTCCTCGGCGATGTTGGCCTTCGGTCCGTGGCTCTTGAAGAACTCCTCCGGCGATCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGTGGTGGAAACGAAATAGGTGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAAGCCATGTCCATGCCACCTCATGTCCCGGTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTCCTCAGNCTACAGGTGACAGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14840#1 ------------------------------------------------------------
consensus_14840#3 ------------------------------------------------------------
consensus_14840#0 TTTTTTCNTTTTTTTTTNTTNTTTCCCCTTTTTTTTTTTTTACGAAAGATGCTCATTAAT 60
consensus_14840#2 ------------------------------------------------------------
consensus_14840#4 ------------------------------------------------------------
consensus_14840#1 ------------------------------------------------------------
consensus_14840#3 ------------------------------------------------------------
consensus_14840#0 TTCCCAGATTCTGGCAATGTTGAACTGCCAGGGCAACATTTGCATGCAATTCATGTCCGG 120
consensus_14840#2 ------------------------------------------------------------
consensus_14840#4 ------------------------------------------------------------
consensus_14840#1 ------------------------TTTTTTTTTTGGCATCTATCAAACTGACATAACCGG 36
consensus_14840#3 ----------------------------------------TTTTTTTTTTTTTTAACCTG 20
consensus_14840#0 ATGTCCCTATCAAATACTCCATGCAAATTGCAATTGCATCTATCAAACTGACATAACCTG 180
consensus_14840#2 -----------------------------------------TCTCTCTCTCTCTCTCTCT 19
consensus_14840#4 ------------------------------------------------------------
consensus_14840#1 GAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAA 96
consensus_14840#3 GAGAAACGGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAA 80
consensus_14840#0 GAGAAACTGGTCCATAGATGCAAGTATCAGGGGCATGCAACAGGTCGTCTAACCCACCAA 240
consensus_14840#2 CTCTCTCTCTCTCTCTCACTCTCTCACTAGGGGCATGCAACAGGTCGTCTAACCCACCAA 79
consensus_14840#4 -------------------------------TTTTTTTTTTGGGTCGTCTAACCCACCAA 29
* ******************
consensus_14840#1 GTTCTTATTACTAACTGGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCA 156
consensus_14840#3 GTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCA 140
consensus_14840#0 GTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCA 300
consensus_14840#2 GTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACAGGCTAAGACAACGGCGCA 139
consensus_14840#4 GTTCTTATTACTAACTTGTTGCTGGAGAGTACGCATCTTACACGCTAAGACAACGGCGCA 89
**************** ************************* *****************
consensus_14840#1 GGAAAAGATCGGTCGTCTCAGGGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTA 216
consensus_14840#3 GGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACATTGCCCAGGTTA 200
consensus_14840#0 GGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTGAGGACATTGCCCAGGTTA 360
consensus_14840#2 GGAAAAGATCGGTCGTCTCAGTGGTCGTGAAAAATTTCCTTGAGGACATTGCCCAGGTTA 199
consensus_14840#4 GGAAAAGATCGGTCGTCTCAGTGGTCGTGAGAAATTTCCTTAAGGACAT-GCCCAGGTTA 148
********************* ******** ********** ******* **********
consensus_14840#1 GCCTCGGCCCGTGGGGCTCTCCACCCATTGGGCATTGATCCTCACTCTCTCGATGCTCGG 276
consensus_14840#3 GCCTCGGCCC-TGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTG 259
consensus_14840#0 GCCTCGGCCC-TGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTG 419
consensus_14840#2 GCCTCGGCCC-TGGTGCTCTCCACCCATTTGGCATTGATCCTCACTCTCTCGATGCTCTG 258
consensus_14840#4 GCCTCGGCCC-TGGTGCTCTCCACCCATT-GGCATTGATCCTCACTCTCTCGATGCTCTG 206
********** *** ************** **************************** *
consensus_14840#1 GTTCACCG-TCCTCG-CGATGTTGGCCTTCGTCCGGG--CTCTGTGAAGAACTCCTCCGC 332
consensus_14840#3 CTTCACCG-TCCTCG-CGATGTTGGCCTTCGTCCTG---CTCT-TGAAGAACTCCTCCGC 313
consensus_14840#0 CTTCACCG-TCCTCG-CGATGTTGGCCTTCGTCCTG---CTCT-TGAAGAACTCCTCCGC 473
consensus_14840#2 CTTCACCG-TCCTCG-CGATGTTGGCCTTCGTCCTG---CTCT-TGAAGAACTCCTCCGC 312
consensus_14840#4 CTTCACCGGTCCTCGGCGATGTTGGCCTTCGGTCCGTGGCTCT-TGAAGAACTCCTCCGG 265
******* ****** *************** * * **** ***************
consensus_14840#1 --GTCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGGGGGGGAAACGAAATAGG 390
consensus_14840#3 --GTCGTCGCCCATTTCATCGG-TGCGCAGCGG-TGAGACGGTGGTGGAAACGAAATAGG 369
consensus_14840#0 --GTCGTCGCCCATTTCATCGG-TGCGCAGCGG-TGAGACGGTGGTGGAAACGAAATAGG 529
consensus_14840#2 --GTCGTCGCCCATTTCATCGG-TGCGCAACGG-TGAGACGGTGGTGGAAACAAAATAGG 368
consensus_14840#4 CGATCGTCGCCCATTTCATCGGGTGCGCAGCGGGTGAGACGGTGGTGGAAACGAAATAGG 325
******************* ****** *** ******** ** ****** *******
consensus_14840#1 TGAGAAGAGTTCCAGAGAAGGGGTCTGAAAGGTAGTCCCACTTTTCCTTCAA-CCAGGTC 449
consensus_14840#3 TGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAA-CCATGTC 428
consensus_14840#0 TGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAA-CCATGTC 588
consensus_14840#2 TGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAA-CCATGTC 427
consensus_14840#4 TGAGAAGAGTTCCAGAGAAGGTGTCTGAAATGTAGTCCCACTTTTCCTTCAAGCCATGTC 385
********************* ******** ********************* *** ***
consensus_14840#1 CAGGCACCTCAGTGTCCCGTGTGACCGACTCCTCTAAGCAAAAATATAGAGTCCTG---- 505
consensus_14840#3 CATGCCACCTCATGTCCCGTGA---CGACTCCTCTAAGCAAAAATATAGAGTCCTGATTC 485
consensus_14840#0 CATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTC 648
consensus_14840#2 CATGCCACCTCATGTCCCGCTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTC 487
consensus_14840#4 CATGCCACCTCATGTCCCGGTGCACCGACTCCTCTAAGCAAAAATATAGAGTCCTGATTC 445
** ** * ******* *******************************
consensus_14840#1 ---------------------
consensus_14840#3 C-------------------- 486
consensus_14840#0 CTCACCTCAGGTGAC------ 663
consensus_14840#2 CTCACCT--CAGGTGA----- 501
consensus_14840#4 CTCAGNCTACAGGTGACAGCA 466
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||