These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14854#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2071 fasta sequence [GTTCATCTGCTTCTCTCTCTCATCTCTCTTCTGCCATTGTTCTTGCATTTCATCCGGTTCTGAGAGCGTCTCATCGAC-TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTT---AGAGCGAAGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT-CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT-CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCAAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT-GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAGATAAAAAAAAAAAAAAAACTTTAAAAGA] [+] EMBL AK067189 [GTTCATCTGCTTCTCTCTCTCATCTCTCTTCTGCCATTGTTCTTGCATTTCATCCGGTTCTGAGAGCGTCTCATCGAC TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTTCAGAGAGCGAAGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAGGAGAGTTCTATCGTCAAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGG ] [+] EMBL CB623232 [ ATCTCTCTTCTGCCATTGTTCTTGCATTTCATCCGGTTCTGAGAGCGTCTCATCGAC TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTT AGAGCGAGGGGCGGTGCGGAATTGGAGAGAGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAA ] [+] EMBL AK062085 [ aaCATTGTTCTTGCATTTCATCCGGTTCTGAGAGCGTCTCATCGAC TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCCCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTT AGAGCGAAGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCAAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACGTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCA ] [+] EMBL CB676199 [ TCCGGTTCTGAGAGCGTCTCATCGACATCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTT AGAGCGAAGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTTCCTGAg ] [+] EMBL CB619507 [ C TCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTGCACGCCAAGATTTCCCAAGAAACCCGCTCGCTCGCTGCCCTTCAGAGAGCGAGGGGCGGTGCGGAATTGGAGAGAGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCCATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCTCCCTTATTACCCTTTTCCTAGGCACAT ] [+] EMBL CB626585 [ TACCACCATGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTTTGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCCAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCT ] [+] EMBL CB685956 [ CGTTCGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCAAAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACATCCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTNCAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCAT ] [+] EMBL CB675465 [ ACATGCCCTTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTAATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACAGTTCT CCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTT CTGAAGGGTGTTGAGACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGTGAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGGCCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTTGCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGCTCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATGTATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCAAAGGGAAATGAACAGACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTC ] [-] EMBL CB675466 [ CTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTCGTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAG ] [-] EMBL CB619508 [ GTGTTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAAGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGA ] [-] EMBL CB623233 [ GGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTGNGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAAGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCAGAGATACCGTAATGATCATCAGAGCTTCAGATA ] [-] EMBL CB626586 [ GTTCTTGGAACTTGGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAAGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAGATAAAAAAAAga ] [-] EMBL CB676200 [ ATCCCACCNCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAGA ] [-] EMBL CB653507 [ GTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTTTTTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTTTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTTTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCCCATTGTATGAATCTTCCTGACTCAGGTAGAGTTTTGCCAGAGATTGCATCATCCTAGTTTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTTTTCAGATGGAGCATAGATCCCGTAATGATGATCAGAGCTTCAGATAAAAAAAAAAAAAAAACTTTAAAAGA] [-] EMBL CB685957 [ GTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCAATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTTGTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAATTGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCAATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTACATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCAGGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTT GGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTTTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGA ] [+] EMBL AA751934 [ tcggcacGAGGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGGAAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGGTCGTGCAACAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATACTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGAATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGAGTGCATCATCCTAGTCTCCTAGATGGGCATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGATCATCAGAGCTTCAGATNNNAAAAAAAAAAAA ] consensusID : consensus_14854#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 599 fasta sequence [ACCCTCGTCCTCCAATCTCAGGATGGAGCGCGCACGCCGCCTCGCCAACCGCGCGCTGCTGCGCCGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGGCCCCGTCCCGCGGCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCCCGCCCCCCCACGCCCGGCGCCCCACCAGTACACCACGGGGCGGCGGCCCGTGTCGGCTGCGGAGGAGGACATGACAGAGGCACTCCATTGCGGCACTCGGCGGCGACTGCGCGGACGCCGGCGCCGAGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCCGCCGCCGGAGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGAGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGCACCACCACGTTTGGGCGGAAATGGAATTACGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTATGATCCTTGGGTTTGATCCATAGTCGTCTACTGCAATATCACAATGT] [+] EMBL CB640578 [ACCCTCGTCCTCCAATCTCAGGATGGAGCGCGCACGCCGCCTCGCCAACCGCGCGCTGCTGCGCCGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGGCCCCGTCCCGCGGCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCCCGCCCCCCCACGCCCGGCGCCCCACCAGTACACCACGGG ] [+] EMBL CB665382 [ ACGCCCCCTCGCCAACCGCGCGCTGCTGCGCCGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGGCCCCGTCCCGCGGCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCGCGCCCCCCCACGCCCGGCGCCCCACCAGGACACCACGGGGCGGCGGCCCGTGTCGGCTGCGGAGGAGGACATGACAGAGGCACTCCATTGCGGCACTCGGCGGCGACTGCGCGGACGCCGGCGCCGAGGCCGCCGATAGGAGAGCCTTCTCGGTGACCTCCGCCGCCGGAGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCGACGCCGGAGGAAGAGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGCAACTCGCACCACCACGTTTGGGCGGAAATGGAATTACGATGGCAAATAGTGCTGGGATCACTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATCTTTGTGCCAATGCTGACTATGATCCTTGGGTTTGATCCATAGTCGTCTACTGCAATATCACAATGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14854#0 GTTCATCTGCTTCTCTCTCTCATCTCTCTTCTGCCATTGTTCTTGCATTTCATCCGGTTC 60 consensus_14854#1 ACCCTCGTCCTCCAATCTCAGGATGGAGCGCGCACGCCGC-CTCGCCAACCGCGCGCTGC 59 * * ** * **** * * * ** ** * ** * * consensus_14854#0 TGAGAGCGTCTCATCGACTCTCTTACCCCGGTTTCTTCCGCGGTTTTTCCTCGTCCTGTG 120 consensus_14854#1 TGCGC-CGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGG-----CCCCGTCCCGCG 113 ** * ** *** *** * ** *** ** * **** ** ***** * * consensus_14854#0 -CACGCCAAGATTTCCCAAGAAACC-CGCTCGCTCGCTGCCCTTAGAGCGA--------- 169 consensus_14854#1 GCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCCCGCCCCCCCACGCCCGGCGCCCCACC 173 ** * * * ***** * *** *** *** *** * ** consensus_14854#0 AGGGCGGTGCGGAATTGGAGAGGGAGAGGGATGGGGAGGAGGACATGGCAGTGGCACGCC 229 consensus_14854#1 AGTACACCACGGGGCGGCGGCCCGTGTCGGCTGCGGAGGAGGACATGACAGAGGCACTCC 233 ** * *** * * * * ** ** ************* *** ***** ** consensus_14854#0 ATTGCGGCGCTCGGCGTCGCGTGCGCGGCCGCCGCCGCCGTGGCCGCCGATAGGAGAGCC 289 consensus_14854#1 ATTGCGGCACTCGGCGGCGACTGCGCGGACGCCGGCGCCGAGGCCGCCGATAGGAGAGCC 293 ******** ******* ** ******* ***** ***** ******************* consensus_14854#0 TTCTCGGTGACCTCGGCCGCCGGCGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCG 349 consensus_14854#1 TTCTCGGTGACCTCCGCCGCCGGAGGCGGCGCCGCGGCGGCGGCGGCGGTGGTGGCGGCG 353 ************** ******** ************************************ consensus_14854#0 ACGCCGGAGGAAGTGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGC 409 consensus_14854#1 ACGCCGGAGGAAGAGGGCATCCTTCGGAAGGTGGCCAATTTCTTGTGGCAGACTGATGGC 413 ************* ********************************************** consensus_14854#0 AACTCGTACCACCACGTTTGGCCGGAAATGGAATTAGGATGGCAAATAGTGCTGGGATCA 469 consensus_14854#1 AACTCGCACCACCACGTTTGGGCGGAAATGGAATTACGATGGCAAATAGTGCTGGGATCA 473 ****** ************** ************** *********************** consensus_14854#0 CTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATC 529 consensus_14854#1 CTGATCGGATTCTTCGGCGCGGCATTCGGGAGTGTGGGCGGCGTTGGAGGTGGTGGGATC 533 ************************************************************ consensus_14854#0 TTTGTGCCAATGCTGACTTTGATCATTGGGTTTGATCCAAAGTCATCTACTGCAATATCA 589 consensus_14854#1 TTTGTGCCAATGCTGACTATGATCCTTGGGTTTGATCCATAGTCGTCTACTGCAATATCA 593 ****************** ***** ************** **** *************** consensus_14854#0 AAATGTATGATCATGGGTGCAGCTGTCTCAACTGTCTACTACAATCTCAAGCTTAAACAT 649 consensus_14854#1 CAATGT------------------------------------------------------ 599 ***** consensus_14854#0 CCTACGTTGGACATGCCAGTGATTGACTATGACCTAGCCCTGCTGATCCAGCCTATGCTA 709 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 ATGCTTGGGATCAGCATTGGTGTTATTTTCAATGTTTTATTCCCTGACTGGCTGGTCACA 769 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 GTTCTCCTTATTATCCTTTTCCTAGGCACATCAACTAAAGCTTTTCTGAAGGGTGTTGAG 829 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 ACATGGAAGAAAGAGACAATAATCAAAAGGGAGGCTGCAAAACGATTGGAGCAAACCAGT 889 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 GAAGAACCAGAATATGCACCACTTCCTACTGGACCAGGCGCTGTAGCTGATGCAAAAAGG 949 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 CCATCAGATGAAGCGGCATCACTTATGAAGAACATTTACTGGAAGGAGTTTGGCCTTCTT 1009 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 GCATTTGTGTGGATGGCATTCCTTGTTCTTCAGGTCACAAAGAACTACACAGCTACTTGC 1069 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 TCCAGTTGGTACTGGATCTTAAACCTTCTCCAGATCCCAGTATCAGTTGGAGTGACTATG 1129 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 TATGAAGCGCTGGGCCTGATGAGCGGGAAGAGAGTTCTATCGTCAAAGGGAAATGAACAG 1189 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 ACTACACTGAAATTTCACCAGCTCTGCATATACTGCTTCTTCGGTATCACTGCGGGGGTC 1249 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 GTTGGTGGTCTGCTAGGTCTCGGAGGTGGCTTTATCATGGGTCCACTGTTCTTGGAACTT 1309 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 GGCATCCCACCCCAGGTTTCAAGTGCAACAGCCACCTTTGCAATGATGTTCTCATCTTCA 1369 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 ATGTCTGTTGTTGAGTACTACCTGTTGAACCGGTTCCCAGTGCCCTATGCTTTGTACTTT 1429 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 GTCATTGTGGCATTCATCGCTGCCATTATTGGCCAGCATGTGGTCAGGAGGTTGATCAAT 1489 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 TGGTTAGGACGGGCATCGCTCATCATCTTCATTTTGGCTTTCATGATCTTTGTCAGCGCA 1549 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 ATTTCTCTAGGTGGAGTTGGCATCTCAAACATGATTCATAGGATCAACCAACATGAGTAC 1609 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 ATGGGGTTTGAGAACCTTTGCAAATATGATGCGTAGGAAGCCATGCGTAAAAAGCAAGCA 1669 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 GGCTTAGAAGAAGTTAATAATACCATAATCCATTTCTCTATCAGCATCAGAACCATGTGG 1729 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 AAGGAGCATTTCAAGATTTGGTTTTCCAATCATGTGACCAGAGAGAATTTGGTCGTGCAA 1789 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 CAGCTTGGAGGGGAAAACTGCATGGATTAGAATTCAGATCAATTTTGGAGCACAAATATA 1849 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 CTGTTTTCTAGTCTTTAGTTTAAGCCAGTACAGCATGTATCACATATTCACATTGTATGA 1909 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 ATCTTCCTGACTCAGGTAGAGTTCTGCCAGAGATTGCATCATCCTAGTCTCCTAGATGGG 1969 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 CATTTTGCTGTGAAAAACATTCATCACATTCTTCAGATGGAGCATAGATACCGTAATGAT 2029 consensus_14854#1 ------------------------------------------------------------ consensus_14854#0 CATCAGAGCTTCAGATAAAAAAAAAAAAAAAACTTTAAAAGA 2071 consensus_14854#1 ------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||