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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14868#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 809 fasta sequence
[GAGAGAGGAGAAGAAACAGGAGGAGGAGGAGATCGAGGAGGGGATGGGGATCCGGTTCGTGGTGATGGTGAACAAGCAGGGGCAGACGCGGGTGGCGCAATACTACGAGCACCTCTCCGTCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCACCAGTGTTCTTTCGTGGAGCACCGCAACTACAAGGTGGTGTACCGGCGCTACGCCTCCCTCTTCTTCCTAGTCGGCGTCGACAACGATGAGAATGAGTTAGCTATCCTTGAATTCATTCATCTTTTGGTTGAAACTATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAGAAGGTGCAC-TTCATGC-TGGAA-GAGA-TGGTGATGAA-TGG-TTGC-ATTGTC-GAAACTAG--TAAACAGAACA--TCTTGGCACCAATCCACCTGATGGAGAAAACTTCTTAGAAAAATGCTATCCAACA-GGGGAGTGCCTCATACTGTTCTGCTTATCGCCACCGCCTCTGTGCTTCTATAGATTTTTCATCTCAATGTGTAACCATCAACGATTTCCATGTGCATAGACTATTAAACTTGACCTGATAGGAAATAATGAGAATATGACAGATGACGTCTCTGTTCTTTAATGTTATCTTGCTGTGAGTTGTGTTATTTACTCTAGGGTAAATAGGTTGAAAACCTTATATTAGTTGCAAAATAATAAAAAAAAACTCCATGCTAATCTAATAAAATTCTATATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK120131 [GAGAGAGGAGAAGAAACAGGAGGAGGAGGAGATCGAGGAGGGGATGGGGACCCGGTTCGTGGTGATGGTGAACAAGCAGGGGCAGACGCGGGTGGCGCAATACTACGAGCACCTCTCCGTCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCACCAGTGTTCTTTCGTGGAGCACCGCAACTACAAGGTGGTGTACCGGCGCTACGCCTCCCTCTTCTTCCTAGTCGGCGTCGACAACGATGAGAATGAGTTAGCTATCCTTGAATTCATTCATCTTTTGGTTGAAACTATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAGAAGGTGCAC TTCATGC TGGAA GAGA TGGTGATGAA TGG TTGC ATTGTC GAAACTAG TAAACAGAACA TCTTGGCACCAATCCACCTGATGGAGAAAACTTCTTAGAAAAATGCTATCCAACA GGGGAGTGCCTCATACTGTTCTGCTTATCGCCACCGCCTCTGTGCTTCTATAGATTTTTCATCTCAATGTGTAACCATCAACGATTTCCATGTGTATAGACTATTAAACTTGACCTGATAGGAAATAATGAGAATATGACAGATGACGTCTCTGTTCTTTAATGTTATCTTGCTGTGAGTTGTGTTATTTACTCTAGGGTAAATAGGTTGAAAACCTTATATTAGTTGCAAAATAATAAAAAAAAACTCC ]
[+] EMBL AU108848 [ GATGGGAATCCGGTTCGTGGTGATGGTGAACAAGCAGGGGCAGACGCGGGTGGCGCAATACTACGAGCACCTCTCCGTCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCACCAGTGTTCTTTCGTGGAGCACCGCAACTACAAGGTGGTGTACCGGCG TACGCCTCCCTCTTCTTCCTAGTCGGCGTCGACAACGATGAGAATGAGTTAGCTATCCTTGAATTCATTCATCTTTTGGTTGAAACTATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAGAAGGTGCAC TTCATGC TGGAA GAGA TGGTGATGAA TGG TTGC ATTGTC GAAACTAG TAAACAGAACA TCTTGGCACCAATCCACCTGATGGAGAAAACTTCTTAGAAAAATGCTATCCAACA GGGGAGTGCCTCATACTGTTCTGCTTATCGCCACCGCCTCTGTGCTTCTATAGATTTTTCATCTCAATGTGTAACCATCAACGATTTCCATGTGCATAGACTATTAAACTTGACCTGATAGGAAATAATGAGAATATGACAGATGACGTCTCTGTTCTTTAAaaaa ]
[+] EMBL C27315 [ GGGATCCGGTTCGTGGTGATGGTGAACAAGCAGGGGCAGACGCGGGTGGCGCAATACTACGAGCACCTCTCCGTCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCACCAGTGTTCTTTCGTGGAGCACCGCAACTACAAGGTGGTGTACCGGCGCTACGCCTCCCTCTTCTTCCTAGTCGGCGTCGACAACGATGAGAATGAGTTAGCTATCCTTGAATTCATTCATCTTTTGGTTG AACTATGGACCGTCACTTTGGCAATGTGTGTTNACTCGACAATATGTTNCATCTTGAGAAGGTGCACTTTCANGCTTGGAAGGAGATTGGTGATGAATTGGTTTGCAATTTTCGGAAACTTGGTTAAACAGGACATTTTTTGGGACC ]
[+] EMBL CF329314 [ GTTCGTGGTGATGGTGAACAAGCAGGGGCAGACGCGGGTGGCGCAATACTACGAGCACCTCTCCGTCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCACCAGTGTTCTTTCGTGGAGCACCGCAACTACAAGGTGGTGTACCGGCGCTACGCCTCCCTCTTCTTCCTAGTCGGCGTCGACAACGATGAGAATGAGTTAGCTATCCTTGAATTCATTCATCTTTTGGTTGAAACTATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAGAAGGTGCAC TTCATGC TGGAA GAGA TGGTGATGAA TGG TTGC ATTGTC GAAACTAG TAAACAGAACA TCTTGGCACCAATCCACCTGATGGAGAAAACTTCTTAGAAAAATGCTATCCAACAGGGGGAGTGCCTCATACTGTTCTGCTTATCGCCACCGCCTCTGTGCTTCTATAGATTTTTCATCTCAATGTGTAACCATCAACGATTTCCATGTGCATAGACTATTAAACTTGACCTGATAGGAAATAATGAGAATATGACAGATGA ]
[-] EMBL CF329315 [ CCACCAGTGTTCTTTCGTGGAGCACCGCAACTACAAGGTGGTGTACCGGCGCTACGCCTCCCTCTTCTTCCTAGTCGGCGTCGACAACGATGAGAATGAGTTAGCTATCCTTGAATTCATTCATCTTTTGGTTGAAACTATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAGAAGGTGCAC TTCATGC TGGAA GAGA TGGTGATGAA TGG TTGC ATTGTC GAAACTAG TAAACAGAACA TCTTGGCACCAATCCACCTGATGGAGAAAACTTCTTAGAAAAATGCTATCCAACA GGGGAGTGCCTCATACTGTTCTGCTTATCGCCACCGCCTCTGTGCTTCTATAGATTTTTCATCTCAATGTGTAACCATCAACGATTTCCATGTGCATAGACTATTAAACTTGACCTGATAGGAAATAATGAGAATATGACAGATGACGTCTCTGTTCTTTAATGTTAaaaaaa ]
[+] EMBL AU101582 [ CAACTACAAGGTGGTGTACCGGCG TACGCCTCCCTCTTCTTCCTAGTCGGCGTCGACAACGATGAGAATGAGTTAGCTATCCTTGAATTCATTCATCTTTTGGTTGAAACTATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAGAAGGTGCAC TTCATGC TGGAA GAGA TGGTGATGAA TGG TTGC ATTGTC GAAACTAG TAAACAGAACA TCTTGGCACCAATCCACCTGATGGAGAAAACTTCTTAGAAAAATGCTATCCAACA GGGGAGTGCCTCATACTGTTCTGCTTATCGCCACCGCCTCTGTGCTTCTATAGATTTTTCATCTCAATGTGTAACCATCAACGATTTCCATGTGCATAGACTATTAAACTTGACCTGATAGGAAATAATGAGAATATGACAGATGACGTCTCTGTTCTTTAAaaaaa ]
[+] EMBL CF332319 [ TCGCCACCGCCTCTGTGCTTCTATAGATTTTTCATCTCAATGTGTAACCATCAACGATTTCCATGTGCATAGACTATTAAACTTGACCTGATAGGAAATAATGAGAATATGACAGATGACGTCTCTGTTCTTTAATGTTATCTTGCTGTGAGTTGTGTTATTTACTCTAGGATAAATAGGTTGAAAACCTTATATTAGTTGCAAAATAATAAAAAAAAACTCCATGCTAATCTAATAAAATTCTATATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14868#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 784 fasta sequence
[NNAGAAAGAAAGANCAGAGTGTCGAGAGGTTGAAGACGAAGCAGCCTTGGAACAGAGCGAAGGAAGAAGCGAGGAGANGCGAGGCGATGGGGATCCGGTTCGTGCTGTTCGTGAACAAGCAGGGGCAGACGCGGCTGGCCCAGTACTACGAGCACCTCTCCATCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCAGCAGTGTTCGTTCGTGGAGCACCGGAACTACAAGGTTGTGTACCGGCGGT-NGTTTCCCTCTTCTTNCTCGTCGGCGTCGACAACGAGNGGAATGAGCTAGCTATTCTCGAATTCATTCATCTTTNTGTGGAAACTATGGACCGCCACTTCGGAAATGTGTGTGAACTCGACATCATGTTCCATCTAGAGAAGGTGCACTTCATGCTGGAAGAGATGGTGATGAATGGCTGCATAGTAGAGACAAGTAAACAGAACATCTTAGCACCAATCCAGCTTATGGAGAAAACTTCTTAGAATAGCATTCTCTAACTATCTAGTTTTTAATCCTTTTGTCTCTGTGGTGCTTTATCTTTCATCTACTGGGGAGTATAAAAAATTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCGATGTACTTTTCTTCATGTTATTTCATTTTGATTTTTTACACATGATTTGTGAAGATTACAAAGCCNCTGATTGTGAGATCATAATAAGTGCTACGGCTTAAATTGTCAAAAAAAAAAA]
[+] EMBL AU162352 [NNAGAAAGAAAGANCAGAGTGTCGAGAGGTTGAAGACGAAGCAGCCTTGGAACAGAGCGAAGGAAGAAGCGAGGAGANGCGAGGCGATGGGGATCCGGTTCGTGCTGTTCGTGAACAAGCAGGGGCAGACGCGGCTGGCCCAGTACTACGAGCACCTCTCCATCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCANCAGTGTTCGTTCGTGGAGCACCGGAACTACAAGGT ]
[+] EMBL OS1321862 [ GACGAAGCAGCCTTGGAACAGAGCGAAGGAAGAAGCGAGGAGAGGCGAGGCGATGGGGATCCGGTTCGTGCTGTTCGTGAACAAGCAGGGGCAGACGCGGCTGGCCCAGTACTACGAGCACCTCTCCATCGACGAGCGCC NGACCTCGAGGAGGA NTCGTCCGCAAGTNCCTCNGCCGCACCGACCAGCAGTGTTCGTTCGTGGAGCACCGGAACTACAAGGTTGTGTACCGGCGGT NGTTTCCCTCTTCTTNCTCGTCGGCGTCGACAACGAGNGGAATGAGCTAGCTATTCTCGAATTCATTCATCTTTNTG ]
[+] EMBL CA767458 [ CGTGCTGTTTGTGAACAAGCAGGGGCAGACGCGGCTGGCCCAGTACTACGAGCACCTCTCCATCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCAGCAGTGTTCGTTCGTGGAGCACCGGAACTACAAGGTGGTGTACCGGCGGTACGCTTCCCTCTTCTTCCTCGTCGGCGTCGACAACGACGAGAATGAGCTAGCTATTCTCGAATTCATTCATCTTTTTGTGGAAACTATGGACCGCCACTTCGGAAATGTGTGTGAACTCGACATCATGTTCCATCTAGAGAAGGTGCACTTCATGCTGGAAGAGATGGTGATGAATGGCTGCATAGTAGAGACAAGTAAACAGAACATCTTAGCACCAATCCAGCTTATGGAGAAAACTTCTTAGAATAGCATTCTCTAACTATCTAGTTTTTAATCCTTTTGTCTCTGTGGTGCTTTATCTTTCATCTACTGGGGAGTATAAAAAATTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCGATGTACTTTTCT ]
[+] EMBL AU223384 [ GGAAACTATGGACCGCCNCTTCGGAAATGTGTGTGAACTCGACATCATGTTCCATCTAGAGAAGGTGCACTTCATGCTGGAAGAGATGGTGATGAATGGCTGCATAGTAGAGACAAGTAAACAGAACATNTTAGCACCAATCCAGCTTATGGAGAAAACTTNTTAGAATAGCATTCTCTAACTATCTAGTTTTTAATCCTTTTGTCTCTGTGGTGCTTTATCTTTCATCTACTGGGGAGTATAAAAAATTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCGATGTACTTTTCTTCATGTTATTTCATTTTGATTTTTTACACATGATTTGTGAAGATTACAAAGCCNCTGATTGTGAGATCATAATAAGTGCTACGGCTTAAATTGTCAAAAAAAAAAA]
[+] EMBL AU031377 [ GAAACCTTCTTAGAATCGCATTCTCTAACTATCTAGTTTTTAATCCTTTTGTCNCTNTGGTGCTTTATCTTTCATCTACTGGGGAGTATANAAAATTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACANAGATGCGATGTACTTTTCTTCATGTTATTTCATTTTGATTTTTTACACATGATTTGTGAAGATTACNAAGCCACTGATTGTGAGATCATAATAAGTGCTACGGNTTAAAanaaaa ]
consensusID : consensus_14868#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 647 fasta sequence
[GGGGATGGGGATCCGGTTCGTGGTGATGGTGAACAAGCAGGGGCAGACGCGGGTGGCGCAATACTACGAGCACCTCTCCGTCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCACCAGTGTTCTTTCGTGGAGCACCGCAACTACAAGGTGGTGTACCGGCGCTACGCCTCCCTCTTCTTCCTAGTCGGCGTCGACAACGATGAGAATGAGTTAGCTATCCTTGAATTCATTCATCTTTTGGTTGAAACTATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAGGAAGGTGCACTTCATGCTGGAAGAGATGGTGGATGAATGGTTGGCATTGTCGAAACTTAGNAAACAGGAACATCTTGGGCACCAATCCACCTGATGGGAGAAAAACTTCTTAGAAAAATGGCTATCCAACAGGGGAGTGCCTCATACTGTTCTGGCTTTATCGCCANCGGCCTCTGTGCTTCTATAGATTTTNCATCTCAATGTGTAACCATCAACGATTTTCCATGTGCATAGACTATTAAACTTGACCTGATAGGAAATAATGAGGNATATGACAGATGAAGTCTCTGTNCTTTAAAAAGAGAGAAAAAAAAGG]
[+] EMBL AU065331 [GGGGATGGGGATCCGGTTCGTGGTGATGGTGAACAAGCAGGGGCAGACGCGGGTGGCGCAATACTACGAGCACCTCTCCGTCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCACCAGTGTTCTTTCGTGGAGCACCGCAACTACAAGGTGGTGTACCGGCGCTACGCCTCCCTCTTCTTCCTAGTCGGCGTCGACAACGATGAGAATGAGTTAGCTATCCTTGAATTCATTCATCTTTTGGTTGAAACTATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAGGAAGGTGCACTTCATGCTGGAAGAGATGGTGGATGAATGGTTGGCATTGTCGAAACTTAGNAAACAGGAACATCTTGGGCACCAATCCACCTGATGGGAGAAAAACTTCTTAGAAAAATGGCTATCCAACAGGGGAGTGCCTCATACTGTTCTGGCTTTATCGCCANCGGCCTCTGTGCTTCTATAGATTTTNCATCTCAATGTGTAACCATCAACGATTTTCCATGTGCATAGACTATTAAACTTGACCTGATAGGAAATAATGAGGNATATGACAGATGAAGTCTCTGTNCTTTAAAAAGAGAGAAAAAAAAGG]
consensusID : consensus_14868#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 523 fasta sequence
[ATCGTCCGCAAGTGCCTCGCCCGCACCNACCAACAGTGTTCGTTCTTGGAGCACCGGAACTACAAGGTGGTGACCGGCGGTACGCTTCCCTCTTCTTCCTCGTCGGCGTTGACAACGGCGAGAATTAGGAAGGTAATTTTGGAATTCATTCATCTTTTTGTGGAAACTATGGACCGCCACTTCGGAAATGTGTGTGAACTCGACATCATGTTCCATCTAGAGAAGGTGCACTTCATGCTGGAAGAGATGGTGATGAATGGCTGCATAGTAGAGACAAGTAAACAGAACATCTTAGCACCAATCCAGCTTATGGAGAAAACTTCTTAGAATAGCATTCTCTAACTATCTAGTTTTTAATCCTTTTGTCTCTGTGGTGCTTTATCTTTCATCTACTGGGGAGTATAAAAAATTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCGATGTACTTTTCTTCAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT]
[-] EMBL AW155545 [ATCGTCCGCAAGTGCCTCGCCCGCACCNACCAACAGTGTTCGTTCTTGGAGCACCGGAACTACAAGGTGGTGACCGGCGGTACGCTTCCCTCTTCTTCCTCGTCGGCGTTGACAACGGCGAGAATTAGGAAGGTAATTTTGGAATTCATTCATCTTTTTGTGGAAACTATGGACCGCCACTTCGGAAATGTGTGTGAACTCGACATCATGTTCCATCTAGAGAAGGTGCACTTCATGCTGGAAGAGATGGTGATGAATGGCTGCATAGTAGAGACAAGTAAACAGAACATCTTAGCACCAATCCAGCTTATGGAGAAAACTTCTTAGAATAGCATTCTCTAACTATCTAGTTTTTAATCCTTTTGTCTCTGTGGTGCTTTATCTTTCATCTACTGGGGAGTATAAAAAATTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCGATGTACTTTTCTTCAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCT]
[+] EMBL BI797950 [ CATGCTGGAAGAGATGGTGATGAATGGCTGCATAGTAGAGACAAGTAAACAGAACATCTTAGCACCAATCCAGCTTATGGAGAAAACTTCTTAGAATAGCATTCTCTAACTATCTAGTTTTTAATCCTTTTGTCTCTGTGGTGCTTTATCTTTCATCTACTGGGGAGTAT AAATTTCTGTTTGCACATATTATTGATATGA CTGACTGGAGATGATTATATGCTGAATACAAAGATGCGATGTACTTTTCTTCAAAAAAAAAA ]
consensusID : consensus_14868#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 359 fasta sequence
[CTTGGAACAGAGCGAAGGAAGAAGCGAGGAGAGGCGAGGCGATGGGGATCCGGTTCGTGCTGTTCGTGAACAAGCAGGGGCAGACGCGGCTGGCCCAGTACTACGAGCACCTCTCCATCGACGAGCGCCGCGCCCCCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCAGCAGGTTTTGGTTAACCCCCCAATTCCCGATCCCCCCTCCGATTCCTCCTCGTTTTCTTGGATCCAATATTGCCCAGCGCGGAAACTTGGGCTCCGGATTGGTGGGTGGGGGAGCGGGGAAAGGAAGCCTCCTGTTCTTGGATCTGGATCTGTGCAAGTTCTTGGGTGTTCGTTCTCTTGC]
[+] EMBL CF327812 [CTTGGAACAGAGCGAAGGAAGAAGCGAGGAGAGGCGAGGCGATGGGGATCCGGTTCGTGCTGTTCGTGAACAAGCAGGGGCAGACGCGGCTGGCCCAGTACTACGAGCACCTCTCCATCGACGAGCGCCGCGCCCCCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCAGCAGGTTTTGGTTAACCCCCCAATTCCCGATCCCCCCTCCGATTCCTCCTCGTTTTCTTGGATCCAATATTGCCCAGCGCGGAAACTTGGGCTCCGGATTGGTGGGTGGGGGAGCGGGGAAAGGAAGCCTCCTGTTCTTGGATCTGGATCTGTGCAAGTTCTTGGGTGTTCGTTCTCTTGC]
consensusID : consensus_14868#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 128 fasta sequence
[TTCGCCCTTGGACACTGACATGACTGAAGGAGTATAAAAAATTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCGATGTACTTTTCTTCAAAAAA]
[+] EMBL CF291883 [TTCGCCCTTGGACACTGACATGACTGAAGGAGTATAAAAAATTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCGATGTACTTTTCTTCAAAAA ]
[-] EMBL CF291884 [ ATGACTGAAGGAGTATAAAAAATTTCTGTTTGCACATATTATTGATATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCGATGTACTTTTCTTCAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14868#0 -------------------------------------------GAGAGAGGAGAAGAAAC 17
consensus_14868#2 ------------------------------------------------------------
consensus_14868#3 ------------------------------------------------------------
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 NNAGAAAGAAAGANCAGAGTGTCGAGAGGTTGAAGACGAAGCAGCCTTGGAACAGAGCGA 60
consensus_14868#4 ------------------------------------------------------------
consensus_14868#0 AGGAGGAGGAGGAGATCGAGGAGGGGATGGGGATCCGGTTCGTGGTGATGGTGAACAAGC 77
consensus_14868#2 ----------------------GGGGATGGGGATCCGGTTCGTGGTGATGGTGAACAAGC 38
consensus_14868#3 ------------------------------------------------------------
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 AGGAAGAAGCGAGGAGANGCGAGGCGATGGGGATCCGGTTCGTGCTGTTCGTGAACAAGC 120
consensus_14868#4 ------------------------------------------------------------
consensus_14868#0 AGGGGCAGACGCGGGTGGCGCAATACTACGAGCACCTCTCCGTCGACGAGCGCCGCGCCC 137
consensus_14868#2 AGGGGCAGACGCGGGTGGCGCAATACTACGAGCACCTCTCCGTCGACGAGCGCCGCGCCC 98
consensus_14868#3 ------------------------------------------------------------
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 AGGGGCAGACGCGGCTGGCCCAGTACTACGAGCACCTCTCCATCGACGAGCGCCGCGCCC 180
consensus_14868#4 ------------------------------------------------------------
consensus_14868#0 TCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCACCAGTGTTCTTTCGTGG 197
consensus_14868#2 TCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCACCAGTGTTCTTTCGTGG 158
consensus_14868#3 -----------ATCGTCCGCAAGTGCCTCGCCCGCACCNACCAACAGTGTTCGTTCTTGG 49
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 TCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCGCACCGACCAGCAGTGTTCGTTCGTGG 240
consensus_14868#4 ------------------------------------------------------------
consensus_14868#0 AGCACCGCAACTACAAGGTGGTGTACCGGCGCTACGCCTCCCTCTTCTTCCTAGTCGGCG 257
consensus_14868#2 AGCACCGCAACTACAAGGTGGTGTACCGGCGCTACGCCTCCCTCTTCTTCCTAGTCGGCG 218
consensus_14868#3 AGCACCGGAACTACAAGGTGGTG-ACCGGCGGTACGCTTCCCTCTTCTTCCTCGTCGGCG 108
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 AGCACCGGAACTACAAGGTTGTG-TACCGGCGGTNGTTTCCCTCTTCTTNCTCGTCGGCG 299
consensus_14868#4 ------------------------------------------------------------
consensus_14868#0 TCGACAACGATGAGAATGAGTTAGCTA-TCCTTGAATTCATTCATCTTTTGGTTGAAACT 316
consensus_14868#2 TCGACAACGATGAGAATGAGTTAGCTA-TCCTTGAATTCATTCATCTTTTGGTTGAAACT 277
consensus_14868#3 TTGACAACGGCGAGAATTAGGAAGGTAATTTTGGAATTCATTCATCTTTTTGTGGAAACT 168
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 TCGACAACGAGNGGAATGAGCTAGCTA-TTCTCGAATTCATTCATCTTTNTGTGGAAACT 358
consensus_14868#4 ------------------------------------------------------------
consensus_14868#0 ATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAG-AAGGT 375
consensus_14868#2 ATGGACCGTCACTTTGGCAATGTGTGTGAGCTCGACATTATGTTCCATCTGGAGGAAGGT 337
consensus_14868#3 ATGGACCGCCACTTCGGAAATGTGTGTGAACTCGACATCATGTTCCATCTAGAG-AAGGT 227
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 ATGGACCGCCACTTCGGAAATGTGTGTGAACTCGACATCATGTTCCATCTAGAG-AAGGT 417
consensus_14868#4 -----------CTTGGAACAGAGCGAAGGAAGAAGCGAGGAGAGGCGAGGCGATGGGGAT 49
consensus_14868#0 GCACTTCATGCTGGAAGAGATGGTG-ATGAATGGTTG-CATTGTCGAAACT-AGTAAACA 432
consensus_14868#2 GCACTTCATGCTGGAAGAGATGGTGGATGAATGGTTGGCATTGTCGAAACTTAGNAAACA 397
consensus_14868#3 GCACTTCATGCTGGAAGAGATGGTG-ATGAATGGCTG-CATAGTAGAGACA-AGTAAACA 284
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 GCACTTCATGCTGGAAGAGATGGTG-ATGAATGGCTG-CATAGTAGAGACA-AGTAAACA 474
consensus_14868#4 CCGGTTCGTGCTGTTCGTGAACAAGCAGGGGCAGACGCGGCTGGCCCAGTACTACGAGCA 109
consensus_14868#0 G-AACATCTTGG-CACCAATCCACCTGATGGAG--AAAACTTCTTAGAAAAATG-CTATC 487
consensus_14868#2 GGAACATCTTGGGCACCAATCCACCTGATGGGAGAAAAACTTCTTAGAAAAATGGCTATC 457
consensus_14868#3 G-AACATCTTAG-CACCAATCCAGCTTATGGAG--AAAACTTCTTAGAATAGCA-TTCTC 339
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 G-AACATCTTAG-CACCAATCCAGCTTATGGAG--AAAACTTCTTAGAATAGCA-TTCTC 529
consensus_14868#4 CCTCTCCATCGACGAGCGCCGCGCCCCCGAGGGCGAGATCGTCCGCAAGTGCCTCGCCCG 169
consensus_14868#0 CAACAGGGGAGTGCCTCATACTGTTCTG--CTTATCGCCACCG-CCTCTG--TGCTTCTA 542
consensus_14868#2 CAACAGGGGAGTGCCTCATACTGTTCTGGCTTTATCGCCANCGGCCTCTG--TGCTTCTA 515
consensus_14868#3 TAACTATCTAGTTTTTAATCCTTTTGTCT---------------CTGTGG--TGCTT--- 379
consensus_14868#5 ----------------------------------------------TTCG--CCCTT--- 9
consensus_14868#1 TAACTATCTAGTTTTTAATCCTTTTGTCT---------------CTGTGG--TGCTT--- 569
consensus_14868#4 CACCGACCAGCAGGTTTTGGTTAACCCCCCAATTCCCGATCCCCCCTCCGATTCCTCCTC 229
* **
consensus_14868#0 TAGATTTTTCATCTCAATGTGTAACCATCAACGATTT-CCATGTGCATAGACTATTAAAC 601
consensus_14868#2 TAGATTTTNCATCTCAATGTGTAACCATCAACGATTTTCCATGTGCATAGACTATTAAAC 575
consensus_14868#3 --TATCTTTCATCT-ACTGG-GGAGTATAAAAAATTT-CTGTTTGCACATATTATTGA-T 433
consensus_14868#5 --GGACACTGACATGACTGAAGGAGTATAAAAAATTT-CTGTTTGCACATATTATTGA-T 65
consensus_14868#1 --TATCTTTCATCT-ACTGG-GGAGTATAAAAAATTT-CTGTTTGCACATATTATTGA-T 623
consensus_14868#4 GTTTTCTTGGATCCAATATTGCCCAGCGCGGAAACTTGGGCTCCGGATTGGTGGGTGGGG 289
* * * ** * * * *
consensus_14868#0 TTGACCTGATAGGAAATAATGAG-AATATGACAGATGACGTCT-CTGTTCTTTAATGTTA 659
consensus_14868#2 TTGACCTGATAGGAAATAATGAGGNATATGACAGATGAAGTCT-CTGTNCTTTAAAAAGA 634
consensus_14868#3 ATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCG-ATGTACTTTTCTTCAA 492
consensus_14868#5 ATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCG-ATGTACTTTTCTTCAA 124
consensus_14868#1 ATGAGCTGACTGGAGATGATTATATGCTGAATACAAAGATGCG-ATGTACTTTTCTTCAT 682
consensus_14868#4 GAGCGGGGAAAGGAAGCCTCCTGTTCTTGGATCTGGATCTGTGCAAGTTCTTGGGTGTTC 349
* ** *** * ** ***
consensus_14868#0 TCTTGCTGTGAGTTGTGTTATTTACTCTAGGGTAAATAGGTTGAAAACCTTATATTAGTT 719
consensus_14868#2 GAGAAAAAAAAGG----------------------------------------------- 647
consensus_14868#3 AAAAAAAAAAAAAAAACTCGAGACTAGTTCT----------------------------- 523
consensus_14868#5 AAAA-------------------------------------------------------- 128
consensus_14868#1 GTTATTTCATTTTGATTTTTTACACATGATTTGTGAAGATTACAAAGCCNCTGATTGTGA 742
consensus_14868#4 GTTCTCTTGC-------------------------------------------------- 359
consensus_14868#0 GCAAAATAATAAAAAAAAACTCCATGCTAATCTAATAAAATTCTATATTAATAAAAAAAA 779
consensus_14868#2 ------------------------------------------------------------
consensus_14868#3 ------------------------------------------------------------
consensus_14868#5 ------------------------------------------------------------
consensus_14868#1 GATCATAATAAGTGCTACGGCTTAAATTGTCAAAAAAAAAAA------------------ 784
consensus_14868#4 ------------------------------------------------------------
consensus_14868#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 809
consensus_14868#2 ------------------------------
consensus_14868#3 ------------------------------
consensus_14868#5 ------------------------------
consensus_14868#1 ------------------------------
consensus_14868#4 ------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||