|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14869#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1610 fasta sequence
[AGCAGGAGTGGAGAGGAGAATCCGCCGCTGCGCCGTCTTCTTCTCCATTGAAGCCAAGCTCCCCCAGGCCTTCTCGTTCTCCCCCTCCTCCTCGAGCTCTCGCTGGTGCGGGGAGCGAAGTGGAGAGGAGAGGCCGAGAGGGACGAGAGATCGAGAGGGAGAGGGAGCACCGAAGCAGCGGGCGGCAGCATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCCACATGTGG-TTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCTGAGGAAACAGCTGCTGC-TTACCTGAGGGCTATTGAAGAAGGTGCGGATTTTATA-GAAACGGACATCCTTGCTAGCAAAGAT-GGGGCCTTGATCTGCTTTCATGATGTAACACTGGATGCTACAACTGACGTTGCCAGCCGCAA-GGAGTTTTCCAATAGAAGAAGAACCTACGA-GGT-GGAATGGTTCAACGCTACTGGCTGGTTTGTAGTGGACTTCACACTTGAGGAACTTAAAACACTGAAAGTCAATCAGCGATACCCATTCAGAGACCAACAATACAAT-GGCAAGTTTTCAATTATCACATTTGAAGAATTCATTTCTATTGCCTTGGATGCAAGCAGAACTGTCGGAATATACCCAGAGATGAAAGATCCAGTTTTTATCAACAAGCATGTCAAGTGGGATGGTGGGAAGAAGTTTGAGGACAAATTTGTGGATACCTTACTGAAGTATGGATATAAAGGCCAATATATGTCAGAAAATTGGCTGAAGCAGCCGTTGTTTATACAATCTTTTGCTCCTACTTCCCTTGTACATGCATCAAAGTTGACAGACTCTCCCAAGATATTCCTGATTGACGATTTCTCAGTGAGAACACAAGATACAAACCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAACTATGTTGTTGGCCTTGGTCCA-TGGAAAGATACGGTTGTTCCAGC-AGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCT-CATAATCTTCAGGTACACCCGTACACATACAGGAACGAGA-ACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACA-GCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTACAGAACAAAAAAAAAAAGAAAAAAATACTTGTTTTCTGGTGGCTAGCAGTTAGAACGGATTGTAGACACCTCTATAACTATAAATCCCTGAATTGCGGGGAGAAATTTCTACAGTTGTAATAATTGTCTTTAAAACAGTTGTATCTGATTAGTTCCTTGAAACAAAGTTC]
[+] EMBL C26626 [AGCAGGAGTGGAGAGGAGAATCCGCCGCTGCGCCGTCTTCTTCTCCATTGAAGCCAAGNTCCCCCAGGCCTTCTCGTTCTCCCCCTCCTCCTCGAGCTCTCGCTGGTGCGGGGAGCGAAGTGNAGAGGAGAGGCCGAGAGGGACGAGAGATCGAGAGGGAGAGGGAGCACCGAAGCAGCGGGCGGCA NATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCCACATGTGG TTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCTGAGGAAACAGCTGCTGC TTACCTNAGGGCTATTGAGGAAGGTGCGGA TTTATA GAAc ]
[+] EMBL OSS11193A [ GAGTGGAGAGGAGAATCCGCCGCTGCGCCGTCTTCTTCTCCATTGAAGCCAAGCTCCCCCAGGCCTTCTCGTTCTCCCCCTCCTCCTCGAGCTCTCGCTGGTGCGGGGAGCGAAGTGGAGAGGAGAGGCCGAGAGGGACGAGAGATCGAGAGGGAGAGGGAGCACCGAAGCAGCGGGCGGCAG ATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCCACATGTGG TTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGTNCAAATGGGGAAATTCCTGAGGAAACAGTTG TGG TTACCTGAGGGTTATTGAAGAAGGTGCGGGTTTTATA GGAACGGACATCCTTG ]
[+] EMBL AK066596 [ AGAGGAGAATCCGCCGCTGCGCCGTCTTCTTCTCCATTGAAGCCAAGCTCCCCCAGGCCTTCTCGTTCTCCCCCTCCTCCTCGAGCTCTCGCTGGTGCGGGGAGCGAAGTGGAGAGGAGAGGCCGAGAGGGACGAGAGATCGAGAGGGAGAGGGAGCACCGAAGCAGCGGGCGGCAGCATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCCACATGTGG TTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCTGAGGAAACAGCTGCTGC TTACCTGAGGGCTATTGAAGAAGGTGCGGATTTTATA GAAACGGACATCCTTGCTAGCAAAGAT GGGGCCTTGATCTGCTTTCATGATGTAACACTGGATGCTACAACTGACGTTGCCAGCCGCAA GGAGTTTTCCAATAGAAGAAGAACCTACGA GGT GGAATGGTTCAACGCTACTGGCTGGTTTGTAGTGGACTTCACACTTGAGGAACTTAAAACACTGAAAGTCAATCAGCGATACCCATTCAGAGACCAACAATACAAT GGCAAGTTTTCAATTATCACATTTGAAGAATTCATTTCTATTGCCTTGGATGCAAGCAGAACTGTCGGAATATACCCAGAGATGAAAGATCCAGTTTTTATCAACAAGCATGTCAAGTGGGATGGTGGGAAGAAGTTTGAGGACAAATTTGTGGATACCTTACTGAAGTATGGATATAAAGGCCAATATATGTCAGAAAATTGGCTGAAGCAGCCGTTGTTTATACAATCTTTTGCTCCTACTTCCCTTGTACATGCATCAAAGTTGACAGACTCTCCCAAGATATTCCTGATTGACGATTTCTCAGTGAGAACACAAGATACAAACCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAACTATGTTGTTGGCCTTGGTCCA TGGAAAGATACGGTTGTTCCAGC AGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCT CATAATCTTCAGGTACACCCGTACACATACAGGAACGAGA ACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACA GCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTACAGAACAAAAAAAAAAAGAAAAAAATACTTGTTTTCTGGTGGCTAGCAGTTAGAACGGATTGTAGACACCTCTATAACTATAAATCCCTGAATTGCGGGGAGAAATTTCTACAGTTGTAATAATTGTCTTTAAAACAGTTGTATCTGATTAGTTCCTTGAAACAAAGTTC]
[+] EMBL AK061563 [ AAGCTCCCCCAGGCCTTCTCGTTCTCCCCCTCCTCCTCGAGCTCTCGCTGGTGCGGGGAGCGAAGTGGAGAGGAGAGGCCGAGAGGGACGAGAGATCGAGAGGGAGAGGGAGCACCGAAGCAGCGGGCGGCAGCATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCCACATGTGG TTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCTGAGGAAACAGCTGCTGC TTACCTGAGGGCTATTGAAGAAGGTGCGGATTTTATA GAAACGGACATCCTTGCTAGCAAAGAT GGGGCCTTGATCTGCTTTCATGATGTAACACTGGATGCTACAACTGACGTTGCCAGCCGCAA GGAGTTTTCCAATAGAAGAAGAACCTACGA GGT GGAATGGTTCAACGCTACTGGCTGGTTTGTAGTGGACTTCACACTTGAGGAACTTAAAACACTGAAAGTCAATCAGCGATACCCATTCAGAGACCAACAATACAAT GGCAAGTTTTCAATTATCACATTTGAAGAATTCATTTCTATTGCCTTGGATGCAAGCAGAACTGTCGGAATATACCCAGAGATGAAAGATCCAGTTTTTATCAACAAGCATGTCAAGTGGGATGGTGGGAAGAAGTTTGAGGACAAATTTGTGGATACCTTACTGAAGTATGGATATAAAGGCCAATATATGTCAGAAAATTGGCTGAAGCAGCCGTTGTTTATACAATCTTTTGCTCCTACTTCCCTTGTACATGCATCAAAGTTGACAGACTCTCCCAAGATATTCCTGATTGACGATTTCTCAGTGAGAACACAAGATACAAACCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAACTATGTTGTTGGCCTTGGTCCA TGGAAAGATACGGTTGTTCCAGC AGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCT CATAATCTTCAGGTACACCCGTACACATACAGGAACGAGA ACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACA GCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAAT ]
[+] EMBL C26006 [ CTCTCGCTGGTGCGGGGAGCGAAGTGNAGAGGAGAGGCCGAGAGGGACGAGAGATCGAGAGGGAGAGGGAGCACCGAAGCAGCGGGCGGCA CATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCCACATGTGG TTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCTGAGGAAACAGCTGCTGCTTTACCTGAGGGCTATTGAAGAAGGTGCGGATTTTATAGGNAACGGACATCCTTTCTAGCAAAGATGGGGGCCTT ATCTGCTTTCATGAT ]
[+] EMBL OSC103051 [ ccnAGAGATCGAGAGGGAGAGGGAGCACCGAAGCAGCGGGCGGCA NATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCCACATGTGGTTTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCTGAGGAAACAGCTGCTGC TTACCTAAGGGCTATTGAAGAAGGTGCGGATTTTATA GAAACGGACATCCTTNCTAGCAAAGAT GGGGCCTTGATCTGCTTTCATGATGTAACACTGGATGCTACAACTGACGTTGCCAGCCGC ]
[+] EMBL CF280763 [ AGAGGGAGCACCGAAGCAGCGGGCGGCAGCATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCC CATGTGG TTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCTGAGGAAACAGCTGCTGC TTACCTGAGGGCTATTGAAGAAGGTGCGGATTTTATA GAAACGGACATCCTTGCTAGCAAAGAT GGGGCCTTGATCTGCTTTCATGATGTAACACTGGATGCTACAACTGACGTTGCCAGCCGCAAGGGAGTTTTCCAATAGAAGAAGAACCTACGAGGGT GGAATGGTTCAACGCTACTGGCTGGTTTGTAGTGGACTTCACACTTGAGGAACTTAAAACACTGAAAGTCAATCAGCGATACCCATTCAGAGACCAACAATACAATGGGCAAGTTTTCAATTATCACATTTGAAGAATTCATTTCTATTGCCTTGGATGC AGCAGAACTGTCGGAATATCCC ]
[+] EMBL CF280185 [ AGAGGGAGCACCGAAGCAGCGGGCGGCAGCATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCC CATGTGG TTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCTGAGGAAACAGCTGCTGC TTACCTGAGGGCTATTGAAGAAGGTGCGGATTTTATA GAAACGGACATCCTTGCTAGCAAAGAT GGGGCCTTGATCTGCTTTCATGATGTAACACTGGATGCTACAACTGACGTTGCCAGCCGCAA GGAGTTTTCCAATAGAAGAAGAACCTACGA GGTNGGAATGGTTCAACGCTACTGGCTGGTTTGTAGTGGACTTCACACTTGAGGAACTTAAAACACTGAAAGTCAATCAGCGATACCCATTCAGAGACCAACAATACAAT GGCAAGTTTTCAATTATCACATTTGAAGAATTCATTTCTATTGCCTTGGATGCAAGCAGAACTGTCGGAATta ]
[+] EMBL CF280392 [ AGAGGGAGCACCGAAGCAGCGGGCGGCAGCATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCCACATGTGG TTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGACCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCTGAGGAAACAGCTGCTGC TTACCTGAGGGCTATTGAAGAAGGTGC ]
[-] EMBL CA762969 [ TGTGGATACCTTACTGACGTAGGGATATAAAGGCCAATATATGTCAGAAAATTGGCTGAAGCAGCCGTTGTTTATACAATCTTTTGCTCCTACTTCCCTTGTACATGCATCAAAGTTGACAGACTCTCCCAAGATATTCCTGATTGACGATTTCTCAGTGAGAACACAAGATACAAACCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAACTATGTTGTTGGCCTTGGTCCA TGGAAAGATACGGTTGTTCCAGC AGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCT CATAATCTTCAGGTACACCCGTACACATACAGGAACGAGA ATCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACA GCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTCCTAGTAAAAAATGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTACAGAACAAAAAAAAA ]
[+] EMBL AU100753 [ TGCATCAAAGTTGACAGACTCTCCCAAGATATTCCTGATTGACGATTTCTCAGTGAGNACACAAGATACAANCCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAACTATGTTGTTGGCCTTGGTCCA TGGAAAGATACGGTTGTTCCAGC AGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCT CATAATCTTCAGGTACACCCGTACACATACAGGAACGAGA ACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACA GCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTACAGAACAAAAAAAA ]
[+] EMBL BM418623 [ gaAACCCAAGATCCAAACCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAACTATGTTGTTGGCCTTGGTCCACTGGAAAGATACGGTTGTTCCAGCAAGCC AAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCT CATAATCTTCAGGTACACCCGTACACATACAGGAACGAGA ATCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACA GCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGC AACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCC ATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTACAGAACAAAAAAAA ]
[+] EMBL AU222483 [ ATGTTGTTGGCCTTGGTCCA TGGAAAGATACGGTTGTTCCAGC AGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCT CATAATCTTCAGGTACACCCGTACACATACAGGAACGAGA ACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACA GCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTACAGAACAAAAA ]
[+] EMBL AU102174 [ CTTGGTCCA TGGAAAGATACGGTTGTTCCAGC AGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCT CATAATCTTCAGGTACACCCGTACACATACAGGAACGAGA ACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACA GCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTACAGAACAAAAA ]
[+] EMBL AU086017 [ GCACATGCTCCATAATCTTCAGGTACACCCGTACACATACAGGAACGAGANACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACANGCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTACAGAACAAA ]
[-] EMBL CF280186 [ T CATAATCTTCAGGTACACCCGTACACATACAGGAACGAGA ACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACA GCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCCTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTACAGAACAAAAAA ]
consensusID : consensus_14869#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 587 fasta sequence
[AAAGTTGACAGACTCTCCCAAGATATTCCTGATTGACGATTTCTCAGTGAGAACACAAGATACAAACCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAACTATGTTGTTGGCCTTGGTCCATGGAAAGATACGGTTGTTCCAGCAGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCTCATAATCTTCAGGTACACCCGTACACATACAGGAACGAGAACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACAGCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCAAGCACAA--TACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACAAAAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTGCGTTTTAAAAAAAAAAAAAAAAAAAAAGTCATGCCGTTACGTAGCGTATC]
[-] EMBL CF280764 [AAAGTTGACAGACTCTCCCAAGATATTCCTGATTGACGATTTCTCAGTGAGAACACAAGATACAAACCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAACTATGTTGTTGGCCTTGGTCCATGGAAAGATACGGTTGTTCCAGCAGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCTCATAATCTTCAGGTACACCCGTACACATACAGGAACGAGAACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACAGCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCCAAGCACAA TACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACAAAAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTGCGTTTTAAAAAAAAAAAAAAAAAAAAAGTCATGCCGTTACGTAGCGTATC]
[-] EMBL CF280393 [ AGATACGGTTGTTCCAGCAGCCAAAAACTATACGATGGCACCGACTGATCTTGTTGCAAGAGCACATGCTCATAATCTTCAGGTACACCCGTACACATACAGGAACGAGAACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAGTATGATTTCTGGATAAACAGCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCAAAAAACAAGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAAAAAAAAACAGCCTCCTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTTTTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14869#0 AGCAGGAGTGGAGAGGAGAATCCGCCGCTGCGCCGTCTTCTTCTCCATTGAAGCCAAGCT 60
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 CCCCCAGGCCTTCTCGTTCTCCCCCTCCTCCTCGAGCTCTCGCTGGTGCGGGGAGCGAAG 120
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 TGGAGAGGAGAGGCCGAGAGGGACGAGAGATCGAGAGGGAGAGGGAGCACCGAAGCAGCG 180
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 GGCGGCAGCATGCGGCCTTCGCTCCGTACTATCTATTTTCTTCTTTTGCTACTTCCACAT 240
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 GTGGTTTTTTCTAGACCACTCTTTCCACTACCAAGCAAGAGTAATGGAATAGAGAAGAGA 300
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 CCCTTACAAACTTTTCGACCATATAACATTGCTCACCGTGGCTCAAATGGGGAAATTCCT 360
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 GAGGAAACAGCTGCTGCTTACCTGAGGGCTATTGAAGAAGGTGCGGATTTTATAGAAACG 420
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 GACATCCTTGCTAGCAAAGATGGGGCCTTGATCTGCTTTCATGATGTAACACTGGATGCT 480
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 ACAACTGACGTTGCCAGCCGCAAGGAGTTTTCCAATAGAAGAAGAACCTACGAGGTGGAA 540
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 TGGTTCAACGCTACTGGCTGGTTTGTAGTGGACTTCACACTTGAGGAACTTAAAACACTG 600
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 AAAGTCAATCAGCGATACCCATTCAGAGACCAACAATACAATGGCAAGTTTTCAATTATC 660
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 ACATTTGAAGAATTCATTTCTATTGCCTTGGATGCAAGCAGAACTGTCGGAATATACCCA 720
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 GAGATGAAAGATCCAGTTTTTATCAACAAGCATGTCAAGTGGGATGGTGGGAAGAAGTTT 780
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 GAGGACAAATTTGTGGATACCTTACTGAAGTATGGATATAAAGGCCAATATATGTCAGAA 840
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 AATTGGCTGAAGCAGCCGTTGTTTATACAATCTTTTGCTCCTACTTCCCTTGTACATGCA 900
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 TCAAAGTTGACAGACTCTCCCAAGATATTCCTGATTGACGATTTCTCAGTGAGAACACAA 960
consensus_14869#1 --AAAGTTGACAGACTCTCCCAAGATATTCCTGATTGACGATTTCTCAGTGAGAACACAA 58
**********************************************************
consensus_14869#0 GATACAAACCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAAC 1020
consensus_14869#1 GATACAAACCAGTCATACTGGGACATCACTTCTGATGACTACCTAGCATATATTAGTAAC 118
************************************************************
consensus_14869#0 TATGTTGTTGGCCTTGGTCCATGGAAAGATACGGTTGTTCCAGCAGCCAAAAACTATACG 1080
consensus_14869#1 TATGTTGTTGGCCTTGGTCCATGGAAAGATACGGTTGTTCCAGCAGCCAAAAACTATACG 178
************************************************************
consensus_14869#0 ATGGCACCGACTGATCTTGTTGCAAGAGCACATGCTCATAATCTTCAGGTACACCCGTAC 1140
consensus_14869#1 ATGGCACCGACTGATCTTGTTGCAAGAGCACATGCTCATAATCTTCAGGTACACCCGTAC 238
************************************************************
consensus_14869#0 ACATACAGGAACGAGAACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAG 1200
consensus_14869#1 ACATACAGGAACGAGAACCAATTCCTGCACCTCAACTTCCATCAGGACCCTTATGCTGAG 298
************************************************************
consensus_14869#0 TATGATTTCTGGATAAACAGCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCC 1260
consensus_14869#1 TATGATTTCTGGATAAACAGCATGGGGGTCGATGGATTGTTCACTGATTTCACTGGATCC 358
************************************************************
consensus_14869#0 CTGCACCGTTACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACTGCAAACAGCCTC 1320
consensus_14869#1 AAGCACAAT-ACCAGGAACTGGTAGCTCCACATGCGAAGGATGAAACAAAAAACAGCCTC 417
**** * ************************************* **********
consensus_14869#0 CTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTT 1380
consensus_14869#1 CTAGTAAAAATTGCTCAAATGATCTCCCAATATGAAGGTTTCTGATCATGTTTTCCATTT 477
************************************************************
consensus_14869#0 TTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTA 1440
consensus_14869#1 TTCCGTTAATCGACATGCTTATATACACGCATTAGTGATCAAGGGTGACCTTGAATGTTG 537
***********************************************************
consensus_14869#0 CAGAACAAAAAAAAAAAGAAAAAAATACTTGTTTTCTGGTGGCTAGCAGTTAGAACGGAT 1500
consensus_14869#1 CGTTTTAAAAAAAAAAAAAAAAAAAAAGTCATG--CCGTTACGTAGCGTATC-------- 587
* *********** ******* * * * * * * **** *
consensus_14869#0 TGTAGACACCTCTATAACTATAAATCCCTGAATTGCGGGGAGAAATTTCTACAGTTGTAA 1560
consensus_14869#1 ------------------------------------------------------------
consensus_14869#0 TAATTGTCTTTAAAACAGTTGTATCTGATTAGTTCCTTGAAACAAAGTTC 1610
consensus_14869#1 --------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||