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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14874#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1915 fasta sequence
[CTCCTCCCTACACCGCTCGCCGTCGGTGGCCGCACCGTTATGCCATGGCCGCCACCACCACCATCCTCTCCTCCGCCGCGCCCACGCCGCTGACCGCCCCGCCTCGCGCCCGCGCGCGCGCTCCCGCCGCCCGGAGGCGGCGGCTAAGAGCCCGTGACATCCTCGGCGCCGCGCTCGGCCTCGCCAATGGCGGCGCCAGCGCCGCGCTCGCCGCGCCGCTGTCCTACGAGGAGACGCTGCGTCTCTCGACGGACTCCGGCGGCGGCGGAGGCGGAGGCGGAGGCGGGGAGTTCGCGCTCCCGGACCTCGGCCTCGGCGGGGTGCTCGACTTCGTGGCGCAGAACCCGCTGGCGGCGGCGGCGGGGGTCGCCGCGGTGGCGCTGCCGCTGGTGCTCGCGCAGGTGCTGGGCGGGGCGTCGAAGCCGTACGGCGTGGTGTCGGCGGCCGCCGCGTACCGGGCGCTGGTGGAGGAGCCCGGCGCGCAGCTGGTGGACATCAGGCCGCCCGGCGACGCCCGGCAGAGCGGCGCGCCCGACCTCCGCGAGGCCAAGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCCTCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAGCTGCTTTTGCAGTGAAGGATGGTGCAGAGGGACGCCGAGGATGGCTGAGCAGTAGTCTTCCCTGGACAGCTCCCAAGAAGGGATTCAGCTTGAGCGATCTAATCGGGGATGGCACAGATGGTTTGCCTGTCACACTTGGGCTTGCTGCAGCTACTGGTTTGGGAATACTTGCCTACACAGAGATAGAGACTGTGCTTCAGTTTTT-GGGGTCAGCTGCCATTGTCCAGCTAGTTGCAAGCAAACTCATATATGCTGAGGACCGAAAGAGAACCCTTAAACAGATCGATGATTTCTTCAACAAAAAGGTTGCTCCAAAGGAGCTTGTTGATGAAATAAAGGAAATCGGTCAGGCTCTGCTGCCTTCTACTGGTACCAAGAGCCAACCAGCAATCACAGAAGCTGCTCCAGCAACAGCAGAAGCTGCTCCAGCTGCCGCCACAGCTACCGCTGCACCACCGGCAGCACCGGTAGAAGAGACCAGTACAGAGGCAGCTCCTGCAGAGCCGACACCTCTTTCACCATATACAAATTATCCGGATCTCAAACCACCATCCTCCCCTTCGCCACTGGCACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATCTGCACCTGCAGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTACCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACAAGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTTGTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCATCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTATACTTGACATGCTTGACGTGTAAATCATCAGCTCAAATGGATGACAAAACATGATCTGGATAGAGTCCAGTTG-GAAGCAAAAGTATGTTTTTCAAGGATTTCAAAATTTTCAAAAAAAAGATGTATCAT]
[+] EMBL CB674830 [CTCCTCCCTACACCGCTCGCCGTCGGTGGCCGCACCGTTATGCCATGGCCGCCACCACCACCATCCTCTCCTCCGCCGCGCCCACGCCGCTGACCGCCCCGCCTCGCGCCCGCGCGCGCGCTCCCGCCGCCCGGAGGCGGCGGCTAAGAGCCCGTGACATCCTCGGCGCCGCGCTCGGCCTCGCCAATGGCGGCGCCAGCGCCGCGCTCGCCGCGCCGCTGTCCTACGAGGAGACGCTGCGTCTCTCGACGGACTCCGGCGGCGGCGGAGGCGGAGGCGGAGGCGGGGAGTTCGCGCTCCCGGACCTCGGCCTCGGCGGGGTGCTCGACTTCGTGGCGCAGAACCCGCTGGCGGCGGCGGCGGGGGTCGCCGCGGTGGCGCTGCCGCTGGTGCTCGCGCAGGTGCTGGGCGGGGCGTCGAAGCCGTACGGCGTGGTGTCGGCGGCCGCCGCGTACCGGGCGCTGGTGGAGGAGCCCGGCGCGCAGCTGGTGGACATCAGGCCGCCCGGCGACGCCCGGCAGAGCGGCGCGCCCGACCTCCGCGAGGCCAAGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCCTCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAA ]
[+] EMBL CB673968 [ CTCGCCGTCGGTGGCCGCACCGTTATGCCATGGCCGCCACCACCACCATCCTCTCCTCCGCCGCGCCCACGCCGCTGACCGCCCCGCCTCGCGCCCGCGCGCGCGCTCCCGCCGCCCGGAGGCGGCGGCTAAGAGCCCGTGACATCCTCGGCGCCGCGCTCGGCCTCGCCAATGGCGGCGCCAGCGCCGCGCTCGCCGCGCCGCTGTCCTACGAGGAGACGCTGCGTCTCTCGACGGACTCCGGCGGCGGCGGAGGCGGAGGCGGAGGCGGGGAGTTCGCGCTCCCGGACCTCGGCCTCGGCGGGGTGCTCGACTTCGTGGCGCAGAACCCGCTGGCGGCGGCGGCGGGGGTCGCCGCGGTGGCGCTGCCGCTGGTGCTCGCGCAGGTGCTGGGCGGGGCGTCGAAGCCGTACGGCGTGGTGTCGGCGGCCGCCGCGTACCGGGCGCTGGTGGAGGAGCCCGGCGCGCAGCTGGTGGACATCAGGCCGCCCGGCGACGCCCGGCAGAGCGGCGCGCCCGACCTCCGCGAGGCCAAGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCCTCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAGCTGCTTTTGCAGTGAAGGATGGTGCAGAGGGACGCCGAGGATGGCTGAGCAGTAGTCTTCCCTGGACAGCTCCCAAGAAAGGATTCAGCT ]
[+] EMBL CB645494 [ aGGCCGCACCGNTATGCCATGGCCGCCACCACCACCATCCTCTCCTCCGCCGCGCCCACGCCGCTGACCGCCCCGCCTCGCGCCCGCGCGCGCGCTCCCGCCGCCCGGAGGCGGCGGCTAAGAGCCCGTGACATCCTCGGCGCCGCGCTCGGCCTCGCCAATGGCGGCGCCAGCGCCGCGCTCGCCGCGCCGCTGTCCTACGAGGAGACGCTGCGTCTCTCGACGGACTCCGGCGGCGGCGGAGGCGGAGGCGGAGGCGGGGAGTTCGCGCTCCCGGACCTCGGCCTCGGCGGGGTGCTCGACTTCGTGGCGCAGAACCCGCTGGCGGCGGCGGCGGGGGTCGCCGCGGTGGCGCTGCCGCTGGTGCTCGCGCAGGTGCTGGGCGGGGCGTCGAAGCCGTACGGCGTGGTGTCGGCGGCCGCCGCGTACCGGGCGCTGGTGGAGGAGCCCGGCGCGCAGCTGGTGGACATCAGGCCGCCCGGCGACGCCCGGCAGAGCGGCGCGCCCGACCTCCGCGAGGCCAAGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCCTCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAG ]
[+] EMBL CB618796 [ GGGTGCTCTACTTCGTGGCGCACAACCCGCTGGTGGCGGCGGCGGGGGTCGCCGCGGTGGCGCTGCCGCTGGTGCTCGCGCAGGTGCTGGGCGGGGCGTCGAAGCCGTACGGCGTGGTGTCGGCGGCCGCCGCGTACCGGGCGCTGGTGGAGGAGCCCGGCGCGCAGCTGGTGGACATCAGGCCGCCCGGCGACGCCCGGCAGAGCGGCGCGCCCGACCTCCGCGAGGCCAAGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCCTCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAGCTGCTTTTGCAGTGAAGGATGGTGCAGAGGGACGCCGAGGATGGCTGAGCAGTAGTCTTCCCTGGACAGCTCCCAAGAAGGGATTCAGCTTGAGCGATCTAATCGGGGATGGCACAGATGGTTTGCCTGTCACACTTGGGCTTGCTGCAGCTACTGGTTTGGGAATACTTGCCTACACAGAGATAGAGACTGTGCTTCAGTTTTT GGGGTCAGCTGCCATTGTCCAGCTAGTTGCAAGCAAACTCATATATGCTGAAGACCGAAAGAGAACCCTTAAACAGATCGA ]
[+] EMBL CB684714 [ TGGACATCAGGCCGCCCGGCGACGCCCGGCAGAGCGGCGCGCCCGACCTCCGCGAGGCCAAGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCCTCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAGCTGCTTTTGCAGTGAAGGATGGTGCAGAGGGACGCCGAGGATGGCTGAGCAGTAGTCTTCCCTGGACAGCTCCCAAGAAGGGATTCAGCTTGAGCGATCTAATCGGGGATGGCACAGATGGTTTGCCTGTCACACTTGGGCTTGCTGCAGCTACTGGTTTGGGAATACTTGCCTACACAGAGATAGAGACTGTGCTTCAGTTTTT GGGGTCAGCTGCCATTGTCCAGCTAGTTGCAAGCAAACTCATATATGCTGAGGACCGAAAGAGAACCCTTAAACAGATCGATGATTTCTTCAACAAAAAGGTTGCTCCAAAGGAGCTTGTTGATGAAATAAAGGAAATCGGTCAGGCTCTGCTGCCTTCTACTGGTACCAAGAGCCAACCAGCAATCACAGAAGCTGCTCCAGCAACAGCAGAAGCTGCTCCAGCTGCCGCCACAGCTACCGCTGCACCACCGGCAGCACCGGTAGAAGAGACCAGTACAGAGGCAGCTCCTGCAGAGCCGACACCTCTTTCACCATATACAAATTATCCGGATCTCGAACCACCATCCTCCC ]
[+] EMBL CF312584 [ AGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCCTCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAGCTGCTTTTGCAGTGAAGGATGGTGCAGAGGGACGCCGAGGATGGCTGAGCAGTAGTCTTCCCTGGACAGCTCCCAAGAAGGGATTCAGCTTGAGCGATCTAATCGGGGATGGCACAGATGGTTTGCCTGTCACACTTGGGCTTGCTGCAGCTACTGGTTTAGGAATACTTGCCTACACAGAGATAGAGACTGTGCTTCAGTTTTTGGGGGTCAGCTGCCATTGTCCAGCTAGTTGCAAGCAAACTCATATATGCTGAGGACCGAAAGAGAACCCTTAAACAGATC ]
[+] EMBL CF196681 [ GAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACAAGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAGCTGCTTTTGCAGTGAAGGATGGTGCAGAGGGACGCCGAGGATGGCTGAGCAGTAGTCTTCCCTGGACAGCTCCCAAGAAGGGATTCAGCTTGAGCGATCTAATCGGGGATGGCACAGATGGTTTGCCTGTCACACTTGGGCTTGCTGCAGCTACTGGTTTGGGAATACTTGCCTACACAGAGATAGAGACTGTGCTTCAGTTTTT GGGGTCAGCTGCCATTGTCCAGCTAGTTGCAAGCAAACTCATATATGCTGAGGACCGAAAGAGNACCCTTAAACAGATCGATGATTTCTTCNNCNNAAAGGTTGCTCNNNNNNAGCTTGTTGANNNAATAAAGGAAATCGGNNANNCTCTGCTGnn ]
[+] EMBL CB685452 [ GTACTCTTCCCTGGACAGCTCCCAAGAAGGGATTCAGCTTGAGCGATCTAATCGGGGATGGCACAGATGGTTTGCCTGTCACACTTGGGCTTGCTGCAGCTACTGGTTTGGGAATACTTGCCTACACAGAGATAGAGACTGTGCTTCAGTTTTT GGGGTCAGCTGCCATTGTCCAGCTAGTTGCAAGCAAACTCATATATGCTGAGGACCGAAAGAGAACCCTTAAACAGATCGATGATTTCTTCAACAAAAAGGTTGCTCCAAAGGAGCTTGTTGATGAAATAAAGGAAATCGGTCAGGCTCTGCTGCCTTCTACTGGTACCAAGAGCCAACCAGCAATCACAGAAGCTGCTCCAGCAACAGCAGAAGCTGCTCCAGCTGCCGCCACAGCTACCGCTGCACCACCGGCAGCACCGGTAGAAGAGACCAGTACAGAGGCAGCTCCTGCAGAGCCGACACCTCTTTCACCATATACAAATTATCCGGATCTCAAACCACCATCCTCCCCTTCGCCACTGGCACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATCTGCACCTGCAGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTACCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCCACGGCA ]
[-] EMBL CB673969 [ AGCAATCACAGAAGCTGCTCCAGCAACAGCAGAAGCTGCTCCAGCTGCCGCCACAGCTACCGCTGCACCACCGGCAGCACCGGTAGAAGAGACCAGTACAGAGGCAGCTCCTGCAGAGCCGACACCTCTTTCACCATATACAAATTATCCGGATCTCAAACCACCATCCTCCCCTTCGCCACTGGCACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATCTGCACCTGCAGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTACCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACAAGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTTGTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCATCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTATACTTGACATGCTTGACGTGTAAATCATCAGCTCAAATGGATGACAAAACATGATCTGGATAGAGTCCAGTTG GAAG ]
[-] EMBL CB674831 [ CAATCACAGAAGCTGCTCCAGCAACAGCAGAAGCTGCTCCAGCTGCCGCCACAGCTACCGCTGCACCACCGGCAGCACCGGTAGAAGAGACCAGTACAGAGGCAGCTCCTGCAGAGCCGACACCTCTTTCACCATATACAAATTATCCGGATCTCAAACCACCATCCTCCCCTTCGCCACTGGCACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATCTGCACCTGCAGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTACCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACAAGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTTGTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCATCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTATACTTGACATGCTTGACGTGTAAATCATCAGCTCAAATGGATTAAAAGACA ]
[-] EMBL CB618797 [ GCCACAGGTACCGTTGCACCACCGGCAGCACCGGTAGAAGAGACCAGTACAGAGGCAGCTCCTGCAGAGCCGACACCTCTTTCACCATATACAAATTATCCGGATCTCAAACCACCATCCTCCCCTTCGCCACTGGCACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATCTGCACCTGCAGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTACCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACAAGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGA AGTGTTTTGTTGTATCAATATGTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCATCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTATACTTGACATGCTTGACGTGTAAATCATCAGCTCAAATGGATGACAAAACATGATCTGGATAGAGTCCAGTTGTGAAGCAAAAGTATGTTTTTCAAGGATTTCAAAATTTTCAAAAAAAAGA ]
[-] EMBL BF889464 [ AGCTCTTGCAGAGCCGACACCTCTTTCACCATATACAAATTATCCGGATCTCAAACCACCATCCTCCCCTTCGCCACTGGCACCGGCTGAGGCGGCTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATGTGCACCTGCAGTTAACTCAGCGCCAGTAGCAGAAGCCGCCCCAGAGGTGGCGCCACCTGCAGCTCCGAGACCTTTTTCGCCTTACCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCA ]
[+] EMBL CB681668 [ CCGAACCTGCACCTGCAGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTACCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACAAGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTTGTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCCAGTTGATGCGT ]
[+] EMBL AK058619 [ TGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCATCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTATACTTGACATGCTTGACGTGTAAATCATCAGCTCAAATGGATGACAAAACATGATCTGGATAGAGTCCAGTTGTGAAGCAAAAGTATGTTTTTCAAGGATTTCAAAATTTTCAATACAAAGTTGTATCAT]
consensusID : consensus_14874#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 935 fasta sequence
[CACTCTCTGTTCGAGGGATNGGNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAAGATCCTAAACAACAAAAAAAAATTGTCGTCGTTCCTCCCCCTTCCCCTTCATCCNTGAGCGACACACCTCCTCTTTTCTTATATTTTCAACAGTGTCCAAAGATAAGTATAAAAAGAATGGCTGTTTTTCTCTTTAGGCCCAACCACCCCATTTCAAAGGGTCCCAACACAAAAGGGTCCTCGTTCGCCAAATTCCTTTCCCCCCGCGAGCCGGATAAAAACCCATAAAGAGACGTTCCTTAAAGCCGACCTCTTTTTCCCAATACAAA-AATTCGGTTC-CTAACCCCCATCCCTCCCCTTCG-CAATGGGACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAA-TTTGCACCTGC-AGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCG-CCACCTGCAGCTCCGAGACCTCT-TTCGCCTTACCCGAATTATCCAGACCTCAA-ACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACA-AGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTTGTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCATCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTATACTTGACATGCTTGACGTGTAAAAAAAAAAAAAAAAAACTAAGGA]
[-] EMBL AW155597 [CACTCTCTGTTCGAGGGATNGGNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAAGATCCTAAACAACAAAAAAAAATTGTCGTCGTTCCTCCCCCTTCCCCTTCATCCNTGAGCGACACACCTCCTCTTTTCTTATATTTTCAACAGTGTCCAAAGATAAGTATAAAAAGAATGGCTGTTTTTCTCTTTAGGCCCAACCACCCCATTTCAAAGGGTCCCAACACAAAAGGGTCCTCGTTCGCCAAATTCCTTTCCCCCCGCGAGCCGGATAAAAACCCATAAAGAGACGTTCCTTAAAGCCGACCTCTTTTTCCCAATACAAA AATTCGGTTC CTAACCCCCATCCCTCCCCTTCG CAATGGGACCGGGTGAGGGGACT AAAATTAGTTGGATTCC AGAAGGCAGCGACCGAT TNGGCACCTCA AGTTAACTCAGCACCAGTAGAAGAACCCGCCCCAGAGGCGGCG CCACCTCAAGTTCCGAGACCTCTNTTTGCCTTACCCGAATTATCCAGACCTCAA ACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACA AGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTTGTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCATCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTACAAAGAGTTCATGTCCTGTACTATACTTGACATGCTTGACGTGTAAAAAAAAAAAAAAAAAACT ]
[-] EMBL CB684715 [ ACAAATTATCCGGATCTCAAACCACCAT CCTCCCCTTGGCCACTGGCACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAA TTTGCACCTGC AGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCG CCACCTGCAGCTCCGAGACCTCT TTCGCCTTACCCGAATTATCCAGACCTCAA ACCACCATGGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTGGACGGCATATCTGTACA AGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTTGTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTGGTTTTTCATCTTTTTGCCCCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTATAGGGGACATGCTTGACGTGTAAAAAAAAAAAAAAAATAAAAAGGA]
[+] EMBL BI804173 [ ACCGGCTGAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAA TCTGCACCTGCAAGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCG CCACCTGCAGCTCCGAGACCTCT TTCGCCTTACCCGAATTATCCAGACCTCAA ACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACACAGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTTGTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCC GTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCATCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTATACTTGACATGCTTGACGTGTAAAAAAA ]
[-] EMBL CF312585 [ GAGGCGACTAAAAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATTTTGC CCTGC AGTTAACTCAGCACCAGTAGCAGAAGCCGCCCCAGAGGCGGCGCCCACCTGCAGCTCCGAGACCTCT TTCGCCTTACCCGAATTATCCAGACCTCAANACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATAAGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACA AGATATATATTACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTTGTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAAGTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCATCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTATACTTGAaaaaaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14874#0 CTCCTCCCTACACCGCTCGCCGTCGGTGGCCGCACCGTTATGCCATGGCCGCCACCACCA 60
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 CCATCCTCTCCTCCGCCGCGCCCACGCCGCTGACCGCCCCGCCTCGCGCCCGCGCGCGCG 120
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 CTCCCGCCGCCCGGAGGCGGCGGCTAAGAGCCCGTGACATCCTCGGCGCCGCGCTCGGCC 180
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 TCGCCAATGGCGGCGCCAGCGCCGCGCTCGCCGCGCCGCTGTCCTACGAGGAGACGCTGC 240
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 GTCTCTCGACGGACTCCGGCGGCGGCGGAGGCGGAGGCGGAGGCGGGGAGTTCGCGCTCC 300
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 CGGACCTCGGCCTCGGCGGGGTGCTCGACTTCGTGGCGCAGAACCCGCTGGCGGCGGCGG 360
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 CGGGGGTCGCCGCGGTGGCGCTGCCGCTGGTGCTCGCGCAGGTGCTGGGCGGGGCGTCGA 420
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 AGCCGTACGGCGTGGTGTCGGCGGCCGCCGCGTACCGGGCGCTGGTGGAGGAGCCCGGCG 480
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 CGCAGCTGGTGGACATCAGGCCGCCCGGCGACGCCCGGCAGAGCGGCGCGCCCGACCTCC 540
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 GCGAGGCCAAGAAGAAGGCGGCCGCCGTGCCCTACGACGGGGAGGACAAGAACGGATTCC 600
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 TCAAGAAGCTGTCGCTGAGGTTCAAGGACCCCGAGAACACCACATTGGTCATCCTTGACA 660
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 AGTTTGATGGGAACTCCGAGCTGGTTGCTGAGCTTGTAACAGCGAATGGTTACAAAGCTG 720
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 CTTTTGCAGTGAAGGATGGTGCAGAGGGACGCCGAGGATGGCTGAGCAGTAGTCTTCCCT 780
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 GGACAGCTCCCAAGAAGGGATTCAGCTTGAGCGATCTAATCGGGGATGGCACAGATGGTT 840
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 TGCCTGTCACACTTGGGCTTGCTGCAGCTACTGGTTTGGGAATACTTGCCTACACAGAGA 900
consensus_14874#1 ------------------------------------------CACTCTCTGTTCGAGGGA 18
*** * ** **
consensus_14874#0 TAGAGACTGTGCTTCAGTTTTTGGGGTCAGCTGCCATTGTCCAGCTAGTTGCAAGCAAAC 960
consensus_14874#1 TNGGNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC 78
* * *
consensus_14874#0 TCATATATGCTGAGGACCGAAAGAGAACC---------CTTAAACAGATCGATGATTTCT 1011
consensus_14874#1 CCA-AGATCCTAAACAACAAAAAAAAATTGTCGTCGTTCCTCCCCCTTCCCCTTCATCCN 137
** * ** ** * * * *** * ** * * * * * * *
consensus_14874#0 TCAACAAAAAGGTTGCTC----CAAAGGAGCTTGTTGATGAAATAAAGGAAATCGGTCAG 1067
consensus_14874#1 TGAGCGACACACCTCCTCTTTTCTTATATTTTCAACAGTGTCCAAAGATAAGTATAAAAA 197
* * * * * * *** * * * ** ** ** * *
consensus_14874#0 GCTCTGCTGCCTTCTACTGGTACCAAGAGCCAACCAGCA-ATCACAGAAGCTGCTCCAGC 1126
consensus_14874#1 GAATGGCTGTTTTTCTCT-----TTAGGCCCAACCACCCCATTTCAAAGG--GTCCCAAC 250
* **** ** ** ** ******* * ** ** * * * *** *
consensus_14874#0 AACAGCAGAAGCTGCTCCAGCTGCCGCCACAGCTACCGCTGCACCACCGGCAGCACCGGT 1186
consensus_14874#1 A----CAAAAGGGTCCTCGTTCGCCA----AATTCCTTTCCCCCCGCGAGCCGGAT---- 298
* ** *** * * *** * * * * ** * ** * *
consensus_14874#0 AGAAGAGACCAGTACAGAGGCAGCTCCTGCAGAGCCGACACCTCTTTCACCATATACAAA 1246
consensus_14874#1 ---AAAAACCCATAAAGAGAC-GTTCCT-TAAAGCCGACCTCTTTTTCCCAATACAAAAA 353
* * *** ** **** * * **** * ******* ** **** * *** * ***
consensus_14874#0 TTATCCGGATCTCAAACCACCATCCTCCCCTTCGCCACTGGCACCGGCTGAGGCGACTAA 1306
consensus_14874#1 TT---CGGTTCCTAACCCCCATCCCTCCCCTTCGC-AATGGGACCGGCTGAGGCGACTAA 409
** *** ** ** ** * ************ * *** ******************
consensus_14874#0 AAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATCTGCACCTGCAGTTAACTCAGCACC 1366
consensus_14874#1 AAATGAGTCGGAATCCGAGAGCGCAGCGACCGAATTTGCACCTGCAGTTAACTCAGCACC 469
*********************************** ************************
consensus_14874#0 AGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTA 1426
consensus_14874#1 AGTAGCAGAAGCCGCCCCAGAGGCGGCGCCACCTGCAGCTCCGAGACCTCTTTCGCCTTA 529
************************************************************
consensus_14874#0 CCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATA 1486
consensus_14874#1 CCCGAATTATCCAGACCTCAAACCACCATCGTCGCCTTCACCATCGGCACCATAGGCATA 589
************************************************************
consensus_14874#0 AGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACAAGATATATATT 1546
consensus_14874#1 AGTTGCTGAAGACCGAGTTCATCGTTGATCTCGACGGCATATCTGTACAAGATATATATT 649
************************************************************
consensus_14874#0 ACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTT 1606
consensus_14874#1 ACCAGGCCTAGAGGAGATGGAATCGAGCTGTTTATATGATATCAAAAGGAAGAGTGTTTT 709
************************************************************
consensus_14874#0 GTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAA 1666
consensus_14874#1 GTTGTATCAATATTTAGTCCGATCCTTATATTATCTCATTGGGGGGCAAGTTTTTTTTAA 769
************************************************************
consensus_14874#0 GTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCA 1726
consensus_14874#1 GTACATCTTTGGGTATGGTGTATCCAGTTGATGCGTTCTGATTTTTCGTTTTGTTTTTCA 829
************************************************************
consensus_14874#0 TCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTA 1786
consensus_14874#1 TCTTTTTGCACCTGTAAATGTGGGATCACTAGCACTAAAAAGAGTTCATGTCCTGTACTA 889
************************************************************
consensus_14874#0 TACTTGACATGCTTGACGTGTAAATCATCAGCTCAAATGGATGACAAAACATGATCTGGA 1846
consensus_14874#1 TACTTGACATGCTTGACGTGTAAA-----AAAAAAAAAAAAAAACTAAGGA--------- 935
************************ * *** * ** ** *
consensus_14874#0 TAGAGTCCAGTTGGAAGCAAAAGTATGTTTTTCAAGGATTTCAAAATTTTCAAAAAAAAG 1906
consensus_14874#1 ------------------------------------------------------------
consensus_14874#0 ATGTATCAT 1915
consensus_14874#1 ---------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||