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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14899#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1941 fasta sequence
[ATCCGCCAACCCCTCCTCGCCTTCTTCTTCTCCAGTAATAAATCCACGCAAAAGCCTCGCCGCGCACCACCACCCAGCTCTCTCCACTCCACTCTCGCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG-GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA-GGGTGCCATTTTGTTTCTGATTCCAGATGAAAAGGAAAAA]
[+] EMBL AK068343 [ATCCGCCAACCCCTCCTCGCCTTCTTCTTCTCCAGTAATAAATCCACGCAAAAGCCTCGCCGCGCACCACCACCCAGCTCTCTCCACTCCACTCTCGCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA GGGTGCC ]
[+] EMBL CB618886 [ CTCTCGCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGACAATCACATCTG ]
[+] EMBL CB618882 [ CTCTCTCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCTATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCT ]
[+] EMBL CB618842 [ CTCTCGCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCATAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAAGTCTCG GGTTCCCTAATCAGTCTATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCTCAAATGTTC ]
[+] EMBL CB618884 [ CTCTCTCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCACAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCACTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATAC ]
[+] EMBL CB618655 [ GCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAG ]
[+] EMBL CB674165 [ TGTGACCTTTATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGG ]
[+] EMBL CB621147 [ tAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTCCTCCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCAAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGATTGGGCGTAGAAAGCTCTTCCTTG ]
[+] EMBL CB621183 [ TCTCC GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGA ]
[+] EMBL CB621146 [ TCTCGCGGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGA ]
[+] EMBL CB621145 [ TCTCC TGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGT CCAACTGAGATA ]
[-] EMBL CF326459 [ CCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTAATTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGA ]
[-] EMBL CB618656 [ ATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTGATGTTGTAACAAGGGGTGCCATTTTGTTTCTGA ]
[-] EMBL CB618883 [ GCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA GGGTGCCATTTTGTTTCTGATTCCAGATGAAAAGGAAAAA]
[-] EMBL CB618887 [ GTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTTTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAAGGGGTGCCATTTTGTTTCTGATTCCAGATGAAAAGGAAAAA]
[-] EMBL CB618843 [ ATTCAGATGATCCTTTCCCAGCTTGCTGGGGGGGCAATCCTGGGTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA GGGTGCCATTTTGTTTTTGATTCCAGATGAAAAGGAA ]
[-] EMBL CB618885 [ GATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTTTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTTTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA GGGTGCCATTTTGTTTCTGATTCCAGATGAAAAGGAAAAA]
consensusID : consensus_14899#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 538 fasta sequence
[TCGCCGGCAGCGGCGGGATTCTCTTCGGCTACGACCTCGGCATCTCCGGTTCGTGCCGCTTCCGCCGCCGCCGCCGCCTCGCGCGGTTGATTACTTCCTCGCTGTAGTAAATCTATCTCATCTGTTCATCTCGTCTACTGCTTGTGAGTTGTGACTGTGTCGTGCTGGCTCGTGGTTGGGCCTGTCTGCATCTGCATGGGCCGGTGTTAATGGCTGGCTCGGGCCCAGTCTACGTACAAGAAAAGGTTTGCAAGCTTTTTTGTCATGAGGAATTAAAAAGCTGCATTTCCAGCTCAAAAGATCTCATCTTCCAGCAGTAATGCAGCTTCTCATCAATGTTGCCAACACTTTACTCTTTGTATTCCTTTTTTTTTTTGTTTTTTGTGTGTGTGTGTGTGAGATGGAAGACGAGGCTTCTTGTTTTGTGTGGAGAGTATAGATAAAGATAAGTAATGTAGTTTGGATGATCACGCAAACATTGTTCAAGTTCTCCTGCTTAAAAAAAAAAAAAAAAAAAAAAAANANAAAAAAAAAAAAA]
[+] EMBL CA757036 [TCGCCGGCAGCGGCGGGATTCTCTTCGGCTACGACCTCGGCATCTCCGGTTCGTGCCGCTTCCGCCGCCGCCGCCGCCTCGCGCGGTTGATTACTTCCTCGCTGTAGTAAATCTATCTCATCTGTTCATCTCGTCTACTGCTTGTGAGTTGTGACTGTGTCGTGCTGGCTCGTGGTTGGGCCTGTCTGCATCTGCATGGGCCGGTGTTAATGGCTGGCTCGGGCCCAGTCTACGTACAAGAAAAGGTTTGCAAGCTTTTTTGTCATGAGGAATTAAAAAGCTGCATTTCCAGCTCAAAAGATCTCATCTTCCAGCAGTAATGCAGCTTCTCATCAATGTTGCCAACACTTTACTCTTTGTATTCCTTTTTTTTTTTGTTTTTTGTGTGTGTGTGTGTGAGATGGAAGACGAGGCTTCTTGTTTTGTGTGGAGAGTATAGATAAAGATAAGTAATGTAGTTTGGATGATCACGCAAACATTGTTCAAGTTCTCCTGCTTAAAAAAAAAAAAAAAAAAAAAAAANANAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14899#0 ATCCGCCAACCCCTCCTCGCCTTCTTCTTCTCCAGTAATAAATCCACGCAAAAGCCTCGC 60
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 CGCGCACCACCACCCAGCTCTCTCCACTCCACTCTCGCGTTCTTGTGGAGTCGTGCTCCA 120
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 CTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCG 180
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 TTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTG 240
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 ACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTAC 300
consensus_14899#1 ----------------------------TCGCCGGCAGCGGCGGGATTCTCTTCGGCTAC 32
******************* ************
consensus_14899#0 GACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCG 360
consensus_14899#1 GACCTCGGCATCTCCGGT-------------TCGTGCCGCTTCCGCCGCCGCCGCCGCCT 79
****************** * * ** *** * * **
consensus_14899#0 GATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAG 420
consensus_14899#1 CGCGCG------------------------GTTGATTACTTCCTCGCTGTAGTAAATCTA 115
* * ** *** * *** * * *
consensus_14899#0 CTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCG 480
consensus_14899#1 --TCTCATC-TGTTCATCTCGTC------TACTGCTTGTGA-GTTGTGACTGTGT-CGTG 164
**** * ****** ****** * ** * ** * *** * * ** *
consensus_14899#0 TCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTC 540
consensus_14899#1 CTGGC--TCGTGGTTGGGCCTGTCTGC-----ATCTGCATGGGCCGGTG--------TTA 209
* * ** ** ** * ** ** * *** * **
consensus_14899#0 ATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGG 600
consensus_14899#1 ATGGCTGGCTCGGGCCCAGTCTACGTACAAGAAAAGGTTTGCAAGCTTTTTTGTCATGAG 269
** ** ******* * * ** * ** ** * ** *** * * *
consensus_14899#0 ATCCTACTGGGAATAGGTCTCGGGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAA 660
consensus_14899#1 GAATTA-----AAAAGCT---GCATTTCCAGCTCAAAAGATCTCATCTT--CCAGCAGTA 319
** ** ** * * ** * *** *** ** * * *** *
consensus_14899#0 ATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTC 720
consensus_14899#1 ATG-CAGCTTCTCATCAATGTTG-----CCAACA----CTTTACTCTTTGTATT--CCTT 367
*** * ** * * * ** * *** * *** ** ** ** ***
consensus_14899#0 GGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGC 780
consensus_14899#1 TTTTTTTTTGTTTTTTGTGTGTGTGTGTGTGAGATGGAAGACGAGGCTTCTTGTTTTGTG 427
** * * *** * * * * * * * ** * * *
consensus_14899#0 TGGAGGATATCCCTATCCATGGCTGCAGT--TCCTGCTGCATTCCTAACCATCGGTGCGG 838
consensus_14899#1 TGGAGAGTATAGATAAAGATAAGTAATGTAGTTTGGATGATCACGCAAACATTGTTCAAG 487
***** *** ** ** * ** * * ** * ** *** * * *
consensus_14899#0 TCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAA 898
consensus_14899#1 TTCTCCTGCTTAAAAAAAAAAAAAAAAAAAAAAAANANAAAAAAAAAAAAA--------- 538
* **** * * * * * * ** ** * * *
consensus_14899#0 GGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAG 958
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 TTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGA 1018
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 AATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAA 1078
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 TCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCG 1138
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 CGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGA 1198
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 TGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGA 1258
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 TCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCA 1318
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 TGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTG 1378
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 CATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCA 1438
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 GATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGAC 1498
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 AGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGAT 1558
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 GGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCA 1618
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 TGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGG 1678
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 AGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGA 1738
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 ATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTT 1798
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 TGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTT 1858
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 CAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAAGGGTGCCATTTTGTTTC 1918
consensus_14899#1 ------------------------------------------------------------
consensus_14899#0 TGATTCCAGATGAAAAGGAAAAA 1941
consensus_14899#1 -----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||