These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14899#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1941 fasta sequence [ATCCGCCAACCCCTCCTCGCCTTCTTCTTCTCCAGTAATAAATCCACGCAAAAGCCTCGCCGCGCACCACCACCCAGCTCTCTCCACTCCACTCTCGCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG-GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA-GGGTGCCATTTTGTTTCTGATTCCAGATGAAAAGGAAAAA] [+] EMBL AK068343 [ATCCGCCAACCCCTCCTCGCCTTCTTCTTCTCCAGTAATAAATCCACGCAAAAGCCTCGCCGCGCACCACCACCCAGCTCTCTCCACTCCACTCTCGCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA GGGTGCC ] [+] EMBL CB618886 [ CTCTCGCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGACAATCACATCTG ] [+] EMBL CB618882 [ CTCTCTCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCTATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCT ] [+] EMBL CB618842 [ CTCTCGCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCATAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAAGTCTCG GGTTCCCTAATCAGTCTATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCTCAAATGTTC ] [+] EMBL CB618884 [ CTCTCTCGTTCTTGTGGAGTCGTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCACAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCACTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATAC ] [+] EMBL CB618655 [ GCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAG ] [+] EMBL CB674165 [ TGTGACCTTTATGGACTCGTTTCTGAAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGG ] [+] EMBL CB621147 [ tAATAGGTCTCG GGTTCACTAATCAGTCAATCCCACTCCTCCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCAAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGATTGGGCGTAGAAAGCTCTTCCTTG ] [+] EMBL CB621183 [ TCTCC GGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGA ] [+] EMBL CB621146 [ TCTCGCGGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGA ] [+] EMBL CB621145 [ TCTCC TGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGT CCAACTGAGATA ] [-] EMBL CF326459 [ CCAATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTAATTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGA ] [-] EMBL CB618656 [ ATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTGATGTTGTAACAAGGGGTGCCATTTTGTTTCTGA ] [-] EMBL CB618883 [ GCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA GGGTGCCATTTTGTTTCTGATTCCAGATGAAAAGGAAAAA] [-] EMBL CB618887 [ GTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTTTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAAGGGGTGCCATTTTGTTTCTGATTCCAGATGAAAAGGAAAAA] [-] EMBL CB618843 [ ATTCAGATGATCCTTTCCCAGCTTGCTGGGGGGGCAATCCTGGGTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA GGGTGCCATTTTGTTTTTGATTCCAGATGAAAAGGAA ] [-] EMBL CB618885 [ GATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTTTTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTTTGGAAGAAGATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAA GGGTGCCATTTTGTTTCTGATTCCAGATGAAAAGGAAAAA] consensusID : consensus_14899#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 538 fasta sequence [TCGCCGGCAGCGGCGGGATTCTCTTCGGCTACGACCTCGGCATCTCCGGTTCGTGCCGCTTCCGCCGCCGCCGCCGCCTCGCGCGGTTGATTACTTCCTCGCTGTAGTAAATCTATCTCATCTGTTCATCTCGTCTACTGCTTGTGAGTTGTGACTGTGTCGTGCTGGCTCGTGGTTGGGCCTGTCTGCATCTGCATGGGCCGGTGTTAATGGCTGGCTCGGGCCCAGTCTACGTACAAGAAAAGGTTTGCAAGCTTTTTTGTCATGAGGAATTAAAAAGCTGCATTTCCAGCTCAAAAGATCTCATCTTCCAGCAGTAATGCAGCTTCTCATCAATGTTGCCAACACTTTACTCTTTGTATTCCTTTTTTTTTTTGTTTTTTGTGTGTGTGTGTGTGAGATGGAAGACGAGGCTTCTTGTTTTGTGTGGAGAGTATAGATAAAGATAAGTAATGTAGTTTGGATGATCACGCAAACATTGTTCAAGTTCTCCTGCTTAAAAAAAAAAAAAAAAAAAAAAAANANAAAAAAAAAAAAA] [+] EMBL CA757036 [TCGCCGGCAGCGGCGGGATTCTCTTCGGCTACGACCTCGGCATCTCCGGTTCGTGCCGCTTCCGCCGCCGCCGCCGCCTCGCGCGGTTGATTACTTCCTCGCTGTAGTAAATCTATCTCATCTGTTCATCTCGTCTACTGCTTGTGAGTTGTGACTGTGTCGTGCTGGCTCGTGGTTGGGCCTGTCTGCATCTGCATGGGCCGGTGTTAATGGCTGGCTCGGGCCCAGTCTACGTACAAGAAAAGGTTTGCAAGCTTTTTTGTCATGAGGAATTAAAAAGCTGCATTTCCAGCTCAAAAGATCTCATCTTCCAGCAGTAATGCAGCTTCTCATCAATGTTGCCAACACTTTACTCTTTGTATTCCTTTTTTTTTTTGTTTTTTGTGTGTGTGTGTGTGAGATGGAAGACGAGGCTTCTTGTTTTGTGTGGAGAGTATAGATAAAGATAAGTAATGTAGTTTGGATGATCACGCAAACATTGTTCAAGTTCTCCTGCTTAAAAAAAAAAAAAAAAAAAAAAAANANAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14899#0 ATCCGCCAACCCCTCCTCGCCTTCTTCTTCTCCAGTAATAAATCCACGCAAAAGCCTCGC 60 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 CGCGCACCACCACCCAGCTCTCTCCACTCCACTCTCGCGTTCTTGTGGAGTCGTGCTCCA 120 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 CTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGATTGGGGCG 180 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 TTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCGGGCGGGTG 240 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 ACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCTTCGGCTAC 300 consensus_14899#1 ----------------------------TCGCCGGCAGCGGCGGGATTCTCTTCGGCTAC 32 ******************* ************ consensus_14899#0 GACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGATTCTTCCCG 360 consensus_14899#1 GACCTCGGCATCTCCGGT-------------TCGTGCCGCTTCCGCCGCCGCCGCCGCCT 79 ****************** * * ** *** * * ** consensus_14899#0 GATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCGACAGCGAG 420 consensus_14899#1 CGCGCG------------------------GTTGATTACTTCCTCGCTGTAGTAAATCTA 115 * * ** *** * *** * * * consensus_14899#0 CTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCCTCTTCGCG 480 consensus_14899#1 --TCTCATC-TGTTCATCTCGTC------TACTGCTTGTGA-GTTGTGACTGTGT-CGTG 164 **** * ****** ****** * ** * ** * *** * * ** * consensus_14899#0 TCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCACCGTCTTC 540 consensus_14899#1 CTGGC--TCGTGGTTGGGCCTGTCTGC-----ATCTGCATGGGCCGGTG--------TTA 209 * * ** ** ** * ** ** * *** * ** consensus_14899#0 ATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCATCAACCGG 600 consensus_14899#1 ATGGCTGGCTCGGGCCCAGTCTACGTACAAGAAAAGGTTTGCAAGCTTTTTTGTCATGAG 269 ** ** ******* * * ** * ** ** * ** *** * * * consensus_14899#0 ATCCTACTGGGAATAGGTCTCGGGTTCACTAATCAGTCAATCCCACTGTACCTGTCAGAA 660 consensus_14899#1 GAATTA-----AAAAGCT---GCATTTCCAGCTCAAAAGATCTCATCTT--CCAGCAGTA 319 ** ** ** * * ** * *** *** ** * * *** * consensus_14899#0 ATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCATCAGCCTC 720 consensus_14899#1 ATG-CAGCTTCTCATCAATGTTG-----CCAACA----CTTTACTCTTTGTATT--CCTT 367 *** * ** * * * ** * *** * *** ** ** ** *** consensus_14899#0 GGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTGGATGGGGC 780 consensus_14899#1 TTTTTTTTTGTTTTTTGTGTGTGTGTGTGTGAGATGGAAGACGAGGCTTCTTGTTTTGTG 427 ** * * *** * * * * * * * ** * * * consensus_14899#0 TGGAGGATATCCCTATCCATGGCTGCAGT--TCCTGCTGCATTCCTAACCATCGGTGCGG 838 consensus_14899#1 TGGAGAGTATAGATAAAGATAAGTAATGTAGTTTGGATGATCACGCAAACATTGTTCAAG 487 ***** *** ** ** * ** * * ** * ** *** * * * consensus_14899#0 TCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACAAGGCAA 898 consensus_14899#1 TTCTCCTGCTTAAAAAAAAAAAAAAAAAAAAAAAANANAAAAAAAAAAAAA--------- 538 * **** * * * * * * ** ** * * * consensus_14899#0 GGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATGACTTAG 958 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 TTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCAAGAGGA 1018 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 AATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTACTGGAA 1078 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 TCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGGAGAGCG 1138 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 CGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCATGGCGA 1198 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 TGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTCAGATGA 1258 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 TCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATGGATCCA 1318 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 TGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTGGCTTTG 1378 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 CATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTGAGATCA 1438 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 GATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGATTGGAC 1498 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 AGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTGCAGGAT 1558 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 GGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGCTGCCCA 1618 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 TGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAGGGGAGG 1678 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 AGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGAATTGGA 1738 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 ATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATGTAAGTT 1798 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 TGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGGCTCTTT 1858 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 CAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAAGGGTGCCATTTTGTTTC 1918 consensus_14899#1 ------------------------------------------------------------ consensus_14899#0 TGATTCCAGATGAAAAGGAAAAA 1941 consensus_14899#1 ----------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||