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Oryza sativa
cluster # 14906 cluster # 14906       Sequences # 18       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14906#0 length = 705 sequences # 3  
consensus_14906#1 length = 578 sequences # 14  
consensus_14906#2 length = 161 sequences # 1  

consensusID : consensus_14906#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 705
fasta sequence
                              [TCCTCCTTCGCTCAACCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGACGCGCGAGCCATGGGCGTCACCAAGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTAATTCCTCACCCCCAAACTCCAATTGTTCTTCACCTTTGTATAGGAGTATTTAATTTGCTTGCTTCCATTGTTACGAACGAAAGAGAAGAGATCTTGTGTTTGGTGACTGGTTGATCGATTGGTGTGAAGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCACCCCTGCTCAGGCGCAGCCCCGGCCGGAGCCGGCCGCCGATAAGGCGCCCCAGGCTTAAGTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAACCGATGCACTTGGTGTAGCGTTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTTCA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF333109             [TCCTCCTTCGCTCAACCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGACGCGCGAGCCATGGGCGTCACCAAGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTAATTCCTCACCCCCAAACTCCAATTGTTCTTCACCTTTGTATAGGAGTATTTAATTTGCTTGCTTCCATTGTTACGAACGAAAGAGAAGAGATCTTGTGTTTGGTGACTGGTTGATCGATTGGTGTGAAGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCACCCCTGCTCAGGCGCAGCCCCGGCCGGAGCCGGCCGCCGATAAGGCGCCCCAGGCTTAAGTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAACCGATGCACTTGGTGTAGCGTTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTTCA                                         ]
[-] EMBL CF333110             [                                                                                                                                                        CGGGTAATTCCTCACCCCCAAACTCCAATTGTTCTTCACCTTTGTATAGGAGTATTTAATTTGCTTGCTTCCATTGTTACGAACGAAAGAGAAGAGATCTTGTGTTTGGTGACTGGTTGATCGATTGGTGTGAAGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCACCCCTGCTCAGGCGCAGCCCCGGCCGGAGCCGGCCGCCGATAAGGCGCCCCAGGCTTAAGTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAACCGATGCACTTGGTGTAGCGTTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTTCA  AAAAAAAAAAAAAAA                        ]
[+] EMBL AU029307             [                                                                                                                                                                                                                                                                                                                                                                                                                                       CTCACCCCTGCTCAGGCGCAGCCCCAGCCGGAGCCGGCCGCCGATAAGGCNCCCCAGGCTTAAGTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCNCCACGAGTGAACCGATGCACTTGGTGTAGCGTTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTTCAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_14906#0 TCCTCCTTCGCTCAACCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGA CGCGCGAGCCATGGGCGTCACCAAGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGC CCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTAATTCCTCACCCCCAAACTCCAA TTGTTCTTCACCTTTGTATAGGAGTATTTAATTTGCTTGCTTCCATTGTTACGAACGAAA GAGAAGAGATCTTGTGTTTGGTGACTGGTTGATCGATTGGTGTGAAGGTGCGGCGCGAGC TACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGG ATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAG GCGCTCACCCCTGCTCAGGCGCAGCCCCGGCCGGAGCCGGCCGCCGATAAGGCGCCCCAG GCTTAAGTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTG AACCGATGCACTTGGTGTAGCGTTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCT GCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAA ATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14906#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 578
fasta sequence
                              [AGTCGTCTTCCTCCTTCGCTCAA-CCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGACGCGCGA-CCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC-CCCTGC-TCAGGCGCAGCCCCAG-CCGGAG-CCGGCCGCCGATAAGGCGCCCCA-GGC-TTAA-GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA-CCGATGCACTTGGTGTAGCG-TTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTTCAAAAAATTTGCGTGCT---------AAAAAAAAAAAAAAAAAAAAA]

[-] EMBL AU225420             [AGTCGTCTTCCTCCTTCGCTCAACCCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGACGCGCGAGCCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCAGCCCCAG CCGGAG CCGGCCGCCGATAAGGCGCCCCA GGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTagcggc                                                                                                     ]
[+] EMBL CF329301             [  TCGTCTTCCTCCTTCGCTCAA CCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGACGCGCGAGCCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCAGCCCCAG CCGGAG CCGGCCGCCGATAAGGCGCCCCA GGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTAT                                                                   ]
[+] EMBL C73217               [                     AA CCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGACGCGCGA CCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGA CTACGAGATTAAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGCTTAAGGCGCACCCCAAGCCCGGAG CCGGCCGCCGATAAGG GCCCC                                                                                                                                                                                                                                              ]
[+] EMBL AU065582             [                      A CCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGACGCGCGA CCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGANTNACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATNGCGGAGATNCACGCCGTCTCCATCAAGAAGGCGCTCACNCCTTGC TCAGGCG A CCCAAG CCGGAG CCGGCCGCCGATAANG GCCCCA GG  TTTA GTAGTT TTTAA TNA ACTTTCAAAtt                                                                                                                                                                                                       ]
[+] EMBL AU197777             [                          CGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGACGCGCGAGCCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCAGCCCCAG CCGGAG CCGGCCGCCGATAAGGCGCCCCA GGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTG                                                          ]
[+] EMBL BE530946             [                            CAGAAGAACACAGATTCGAAGAGGCAGAGGCGGCGAAGAGACGCGCGAGCCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCAGCCCCAG CCGGAG CCGGCCGCCGATAAGGCGCCCCA NGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATG                                                                                                                                            ]
[+] EMBL C74003               [                                             GAAGAGGCAGAGGCGGCGAAGAGACGCGCGA NCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCA CCNCAG CCGGAG CC GCCGNCGATAAGG GCCCCA GGCTTTAA GTAGTTCTTGAACTCACAACTNCAAACTGTTCGATCACATATGCANCACGAGTGAACCCGATGCANTTGGTGTAGCGTTTTGTNATGGGTGTTTTAGATGTG                                                                                                                             ]
[+] EMBL C97286               [                                                   GCAGAGGCGGCGAAGAGACGCGCGA CCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCNTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGA NTACGAGATTNAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTNTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCA CCNCAG CCGGAG CCGGCCGCCGATAAGGGCCCCCA GGT TTAANTTAGTTTTTGAACTCACACCTNCAAACTTTTCGTTCACATATGCACCACGTTTTTA CCCGTGCACTTGGTG                                                                                                                                                           ]
[+] EMBL AU065978             [                                                       AGGCGGCGAAGAGACGCGCGA NCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCA CCCCAG CCGGAGCCCGGCCGCCGATAAGG GCCCCA GGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATGGGTGTTTGAGATGTGCGTCA NTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAG                                                     ]
[+] EMBL AU057367             [                                                                                                     TCGAGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCAGCCCCAG CCGGAG CCGGCCGCCGATAAGGCGCCCCA GGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTTCAAAAAAaa                                      ]
[+] EMBL AU101858             [                                                                                                        AGGCCGCCATCACCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCAGCCCCAG CCGGAG CCGGCCGCCGATAAGGCGCCCCA GGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTTCAAAAAA                                        ]
[+] EMBL AU182520             [                                                                                                                    CCTCCTCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCAGCCCCAG CCGGAG CCGGCCGCCGATAAGGCGCCCCAGGGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTTCAAAAA                                         ]
[+] EMBL AU029856             [                                                                                                                                                                                                                                                              tnGCGCCGCACATGGCGGAGATCCACGCCGTNTCCATCAAGAAGGCGCTCAC CCCTGC TCAGGCGCAGCCCCAG CCGGAG CCGGCCGCCGATAAGGCGCCCCA GGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCNCCACGNGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTTCAGTNACTTTGCGTGCTTCCCGNGTCAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C97287               [                                                                                                                                                                                                                                                                                                                                            CGGAG CCGGCCGCCGATAAGGCGCCCNA GGC TTAA GTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAA CCGATGCACTTGGTGTAGCG TTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGNTTGACTGCTTAGAAATTTCAGTAACTTTGCGTGCT         AAAAAAAAAAA          ]


>consensus_14906#1 AGTCGTCTTCCTCCTTCGCTCAACCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGG CGAAGAGACGCGCGACCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCCT CCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTGCGGCGCGAGCTACG AGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAGCGGCACCGGATGG TGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCCATCAAGAAGGCGC TCACCCCTGCTCAGGCGCAGCCCCAGCCGGAGCCGGCCGCCGATAAGGCGCCCCAGGCTT AAGTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACATATGCACCACGAGTGAACC GATGCACTTGGTGTAGCGTTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTGCTT GAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGCTTGACTGCTTAGAAATTT CAAAAAATTTGCGTGCTAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14906#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 161
fasta sequence
                              [TGCACATGATGCACCACGATGGAACCAGATGCACTTGGTGTAGCTTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTCGCTTGAATAATGGGCATACATTGGCAGAATTGGAATGATACTATGCATTGACTGCATTAGAAATTTATAAAAAAAAAA]

[+] EMBL BI796281             [TGCACATGATGCACCACGATGGAACCAGATGCACTTGGTGTAGCTTTGTCATGGGTGTTTGAGATGTGCGTCAGCTCTCTCTCGCTTGAATAATGGGCATACATTGGCAGAATTGGAATGATACTATGCATTGACTGCATTAGAAATTTATAAAAAAAAAA]


>consensus_14906#2 TGCACATGATGCACCACGATGGAACCAGATGCACTTGGTGTAGCTTTGTCATGGGTGTTT GAGATGTGCGTCAGCTCTCTCTCGCTTGAATAATGGGCATACATTGGCAGAATTGGAATG ATACTATGCATTGACTGCATTAGAAATTTATAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14906#0      --------TCCTCCTTCGCTCAACCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGG 52
consensus_14906#1      AGTCGTCTTCCTCCTTCGCTCAACCCGCAGAAGAACACAGATTCGAAGAGGCAGAGGCGG 60
consensus_14906#2      ------------------------------------------------------------
                                                                                   

consensus_14906#0      CGAAGAGACGCGCGAGCCATGGGCGTCACCAAG-AGGATGTCGAGGCCGCCATCACCTCC 111
consensus_14906#1      CGAAGAGACGCGCGA-CCATGGGCGTCACCAAGGAGGATGTCGAGGCCGCCATCACCTCC 119
consensus_14906#2      ------------------------------------------------------------
                                                                                   

consensus_14906#0      TCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGTAATTCCTCACCCCC 171
consensus_14906#1      TCCCTCAGCCCTTCCAGCCTCGTGGTGACGGATACTTCCGGCGGGT-------------- 165
consensus_14906#2      ------------------------------------------------------------
                                                                                   

consensus_14906#0      AAACTCCAATTGTTCTTCACCTTTGTATAGGAGTATTTAATTTGCTTGCTTCCATTGTTA 231
consensus_14906#1      ------------------------------------------------------------
consensus_14906#2      ------------------------------------------------------------
                                                                                   

consensus_14906#0      CGAACGAAAGAGAAGAGATCTTGTGTTTGGTGACTGGTTGATCGATTGGTGTGAAGGTGC 291
consensus_14906#1      ----------------------------------------------------------GC 167
consensus_14906#2      ------------------------------------------------------------
                                                                                   

consensus_14906#0      GGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAG 351
consensus_14906#1      GGCGCGAGCTACGAGATTGAGGTGGTGTCGGAGAAGTTCGAGGGGAAGCGGCTGCTGGAG 227
consensus_14906#2      ------------------------------------------------------------
                                                                                   

consensus_14906#0      CGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCC 411
consensus_14906#1      CGGCACCGGATGGTGAACACCGCGCTGGCGCCGCACATGGCGGAGATCCACGCCGTCTCC 287
consensus_14906#2      ------------------------------------------------------------
                                                                                   

consensus_14906#0      ATCAAGAAGGCGCTCACCCCTGCTCAGGCGCAGCCCCGGCCGGAGCCGGCCGCCGATAAG 471
consensus_14906#1      ATCAAGAAGGCGCTCACCCCTGCTCAGGCGCAGCCCCAGCCGGAGCCGGCCGCCGATAAG 347
consensus_14906#2      ------------------------------------------------------------
                                                                                   

consensus_14906#0      GCGCCCCAGGCTTAAGTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACAT-ATGC 530
consensus_14906#1      GCGCCCCAGGCTTAAGTAGTTCTTGAACTCACACCTCCAAACTGTTCGATCACAT-ATGC 406
consensus_14906#2      ------------------------------------------------TGCACATGATGC 12
                                                                         ***** ****

consensus_14906#0      ACCACGAGTGAACC-GATGCACTTGGTGTAGCGTTTGTCATGGGTGTTTGAGATGTGCGT 589
consensus_14906#1      ACCACGAGTGAACC-GATGCACTTGGTGTAGCGTTTGTCATGGGTGTTTGAGATGTGCGT 465
consensus_14906#2      ACCACGATGGAACCAGATGCACTTGGTGTAGC-TTTGTCATGGGTGTTTGAGATGTGCGT 71
                       *******  ***** ***************** ***************************

consensus_14906#0      CAGCTCTCTCT-GCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGC-T 647
consensus_14906#1      CAGCTCTCTCT-GCTTGAATAATGTGCATACAATGGCAGAATTGGAATGATACTATGC-T 523
consensus_14906#2      CAGCTCTCTCTCGCTTGAATAATGGGCATACATTGGCAGAATTGGAATGATACTATGCAT 131
                       *********** ************ ******* ************************* *

consensus_14906#0      TGACTGC-TTAGAAATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 705
consensus_14906#1      TGACTGC-TTAGAAATTTCAAAAAATTTGCGTGCTAAAAAAAAAAAAAAAAAAAAA--- 578
consensus_14906#2      TGACTGCATTAGAAATTTATAAAAAAAAAA----------------------------- 161
                       ******* **********  *****                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)