|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14927#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 2161 fasta sequence
[TTGCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACG---GGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC-ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTTACCATATGATGGAGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGCCTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGGGATGGCTGACAAAGAAACGGAGCACTCAAAGACGCCATTCATTGCACGGGTTTTCATGAGTATTTCAGGCTCTTCACAGAATACATTTCCTGATATTGATTTTGCAGAAGAGGGCACTTCTGGTGCTGGACCTAGCAGTCCAAAATCGCTAAGGTGTTTGGCGGAGCCAAAGGTTGTAAGGAGGATCAGGGTTGTAGCTGAGAAGACTCCAATTCAGCATGTTCTCCAGCCACCAACCATCGCCTCCTTGCTCGCCATTGTCATCGGCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTGATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCTCGGTGATGTTAATTCTAGGGGGCATGCTTGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC-TTGTCGAGGAAGACCACATGTACCGCTTTG-TGCTG-TCGC-TACAGTACTCCACCCCTA-GT-G-CCATCCTGC-TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT-ACCTGATCGTATATTTCAGGTTGCTTACCA-TTTGAAAGATGATGGCCGGCCGCCT-TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA-TTTTTTTTAGCGATTTATATTTCAGATACA-TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTTCACTTGTGAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK065037 [TTGCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACGCCCCCCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCGCAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTTACCATATGATGGAGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGCCTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGGGATGGCTGACAAAGAAACGGAGCACTCAAAGACGCCATTCATTGCACGGGTTTTCATGAGTATTTCAGGCTCTTCACAGAATACATTTCCTGATATTGATTTTGCAGAAGAGGGCACTTCTGGTGCTGGACCTAGCAGTCCAAAATCGCTAAGGTGTTTGGCGGAGCCAAAGGTTGTAAGGAGGATCAGGGTTGTAGCTGAGAAGACTCCAATTCAGCATGTTCTCCAGCCACCAACCATCGCCTCCTTGCTCGCCATTGTCATCGGCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTGATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCTCGGTGATGTTAATTCTAGGGGGCATGCTTGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGCTTTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTG GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTCTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGTCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGC ]
[+] EMBL CB630417 [ GCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACG GGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTCGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCCNACCGC AGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACC TGGTTTACC ]
[+] EMBL CB630419 [ GCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACG GGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTCGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTT ]
[+] EMBL CB630462 [ GCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACG GGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTCGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTT ]
[+] EMBL AU166671 [ AAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCG ]
[+] EMBL CA997869 [ GAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGGCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCGCAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTTACCATATGATGGAGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGCCTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGG ]
[+] EMBL CB681681 [ AGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGCCTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGGGATGGCTGACAAAGAAACGGAGCACTCAAAGACGCCATTCATTGCACGGGTTTTCATGAGTATTTCAGGCTCTTCACAGAATACATTTCCTGATATTGATTTTGCAGAAGAGGGCACTTCTGGTGCTGGACCTAGCAGTCCAAAATCGCTAAGGTGTTTGGCGGAGCCAAAGGTTGTAAGGAGGATCAGGGTTGTAGCTGAGAAGACTCCAATTCAGCATGTTCTCCAGCCACCAACCATCGCCTCCTTGCTCGCCATTGTCATCGGCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTGATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCTCGGTGATGTTAATTCTAGGGGGCATGCTTGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAAAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAG ]
[-] EMBL CB681682 [ GCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTGATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCTCGGTGATGTTAATTCTAGGGGGCATGCTTGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTTTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTCTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTAAGGGTCGCTTGCACATTTCTTGAT ]
[-] EMBL CB630420 [ TGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTTCACTTGTG ]
[-] EMBL CB630418 [ TGCAGAAGGACCCAAGGATAATGCC TGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCNTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTT ]
[-] EMBL CB630463 [ TGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTT ]
[+] EMBL CF292760 [ TCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTCTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATG ]
[+] EMBL BI807491 [ tccctgTTTGTTCCTGTTCGCTTACAGTACTCCA CCCTAGGT GCCCATCCTGCGTTGGA CGATTGCGAGCCTCAGAGGTTATCTTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGT CGGTGCTATCTC TTCCATCTGACCTGATCGTATATTTCAGGTTGCTTACCAGTTTGAAAGATGACGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACACTGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTC ATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTAC GTTGCTGCTC AAAGTTGTACAAGTACTGCTACATTAGAAGTC ATATATTGCTGTTTGATGCAGTGATGCTTAAAaaaaaaa ]
[+] EMBL BQ908292 [ CAGTACTCCACCCCTA GTGG CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCANCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGACGGCCGGCCGCCTGTCC AAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGNATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTC ATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTAC GTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATCCAGTGATGCTTAAAaa ]
[+] EMBL BI807848 [ gaCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGT CGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGACGGCCGGCCGCCT TCC AAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTC ATATATTGCTGTTTGAT CAGTGATGCTTAAATAaaaa ]
[+] EMBL AU166670 [ TCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTCTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAaaaaaaa ]
[-] EMBL CF292761 [ GTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTTTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTTTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI808178 [ aTGAATGCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATAGTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTC AAAGTTGTACAAGTACTGCTACATTAGAAGTC ATATATTGCTGTTTGATc ]
consensusID : consensus_14927#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 615 fasta sequence
[CATTGGGANATTCTAGCTCAACCCGTTGTACCCCTCGTGATGTGAATTTTAGGGCCATGCCTTGCAGAAGGACCCAAGGATAATCCTTGGGTATCCGGACTATCACTGGGTATAATTTTTGCCAAGGCTTCTGATTCTCCCGNGCATTGGCATCGGTGTCGTCCTGCTGCCAGATCGTTGCATCTGCTTGGTCGAGGAAGACCACATGTACCGCTTTGTGCTGTCGCTGCAGTACTCCACCCCTAGTGCCATCCTGCTTGGAGCGATTGCGAGCCTGAGAGGCTATGCTGTCAAGGAAGCATCAGCACTCCTATTCTGGCAGCACATTTGTGCAGTGCTATCTCTGTGTCCATGCTGACCTGGATGCGTATATTTCAGGTTGCTTACCATTTGAAAGATGATGGCCTGCCGCCTTCCAAAATTGGGTTTATAGCATTCATGCCTCGGAAGTGATTTCTACGGGAGAGGGGTACTTGAATGGATTTTCAACCACATCTGCCTTATGGGTGCAAGTGTATTTATAGTATTTTAAATNTTTNTAGTATTTGTATTTCAGTTACATGTAGAACTGGAGAACAGGATATATATGCTCTTGTTGTTCAATTAAAAAAAAAA]
[+] EMBL BI806374 [CATTGGGANATTCTAGCTCAACCCGTTGTACCCCTCGTGATGTGAATTTTAGGGCCATGCCTTGCAGAAGGACCCAAGGATAATCCTTGGGTATCCGGACTATCACTGGGTATAATTTTTGCCAAGGCTTCTGATTCTCCCGNGCATTGGCATCGGTGTCGTCCTGCTGCCAGATCGTTGCATCTGCTTGGTCGAGGAAGACCACATGTACCGCTTTGTGCTGTCGCTGCAGTACTCCACCCCTAGTGCCATCCTGCTTGGAGCGATTGCGAGCCTGAGAGGCTATGCTGTCAAGGAAGCATCAGCACTCCTATTCTGGCAGCACATTTGTGCAGTGCTATCTCTGTGTCCATGCTGACCTGGATGCGTATATTTCAGGTTGCTTACCATTTGAAAGATGATGGCCTGCCGCCTTCCAAAATTGGGTTTATAGCATTCATGCCTCGGAAGTGATTTCTACGGGAGAGGGGTACTTGAATGGATTTTCAACCACATCTGCCTTATGGGTGCAAGTGTATTTATAGTATTTTAAATNTTTNTAGTATTTGTATTTCAGTTACATGTAGAACTGGAGAACAGGATATATATGCTCTTGTTGTTCAATTAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14927#0 TTGCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGG 60
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 CGCGCGCGTGGACGGGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCG 120
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 CCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTT 180
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 GGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAG 240
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 GGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGG 300
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 CGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGG 360
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 ACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTG 420
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 TGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGC 480
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 TCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAA 540
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 TTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCG 600
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 GGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGT 660
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 TCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGT 720
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 CGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCCACCGCAAGGGTGTCGCTT 780
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 ATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTTACCATATGA 840
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 TGGAGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGC 900
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 CTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGGGATGG 960
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 CTGACAAAGAAACGGAGCACTCAAAGACGCCATTCATTGCACGGGTTTTCATGAGTATTT 1020
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 CAGGCTCTTCACAGAATACATTTCCTGATATTGATTTTGCAGAAGAGGGCACTTCTGGTG 1080
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 CTGGACCTAGCAGTCCAAAATCGCTAAGGTGTTTGGCGGAGCCAAAGGTTGTAAGGAGGA 1140
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 TCAGGGTTGTAGCTGAGAAGACTCCAATTCAGCATGTTCTCCAGCCACCAACCATCGCCT 1200
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 CCTTGCTCGCCATTGTCATCGGCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTG 1260
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 ATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCT 1320
consensus_14927#1 --------------------------CATTGGGANATTCTAGCTCAACCCGTTGTACCCC 34
** *** ************ ***********
consensus_14927#0 CGGTGATGTTAATTCTAGGGGGCATGC-TTGCAGAAGGACCCAAGGATAATGCCTTGGGT 1379
consensus_14927#1 TCGTGATGTGAATTTTAGGGC-CATGCCTTGCAGAAGGACCCAAGGATAAT-CCTTGGGT 92
******* **** ***** ***** *********************** ********
consensus_14927#0 ATCCGGACTATCACTGG-TATAATTGTTGC-AAGGCTCCTGATTCTCCCGTGCATTGGCA 1437
consensus_14927#1 ATCCGGACTATCACTGGGTATAATTTTTGCCAAGGCTTCTGATTCTCCCGNGCATTGGCA 152
***************** ******* **** ****** ************ *********
consensus_14927#0 TCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGCTTG-TCGAGGAAGACCACATGTAC 1496
consensus_14927#1 TCGGTGTCGTCCTGCTGCCAGATCG-TTGCATCTGCTTGGTCGAGGAAGACCACATGTAC 211
***************** ******* ************* ********************
consensus_14927#0 CGCTTTGTGCTGTCGCTACAGTACTCCACCCCTAGTGCCATCCTGCTTGGAGCGATTGCG 1556
consensus_14927#1 CGCTTTGTGCTGTCGCTGCAGTACTCCACCCCTAGTGCCATCCTGCTTGGAGCGATTGCG 271
***************** ******************************************
consensus_14927#0 AGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGT 1616
consensus_14927#1 AGCCTGAGAGGCTATGCTGTCAAGGAAGCATCAGCACTCCTATTCTGGCAGCACATTTGT 331
***** ***** ******************** ***** *********************
consensus_14927#0 GCGGTGCTATCTCTTT--CCATCT--ACCTGAT--CGTATATTTCAGGTTGCTTACCATT 1670
consensus_14927#1 GCAGTGCTATCTCTGTGTCCATGCTGACCTGGATGCGTATATTTCAGGTTGCTTACCATT 391
** *********** * **** ***** *************************
consensus_14927#0 TGAAAGATGATGGCCGGCCGCCTTCCAAAATTGG-TTTGTAGCATTCAT-CCTCGGAAGT 1728
consensus_14927#1 TGAAAGATGATGGCCTGCCGCCTTCCAAAATTGGGTTTATAGCATTCATGCCTCGGAAGT 451
*************** ****************** *** ********** **********
consensus_14927#0 GATTTCTA-GGGAGATGGGTACTTGAATGGATTTTCAACCACGTCT-CCTTATGGT--CA 1784
consensus_14927#1 GATTTCTACGGGAGAGGGGTACTTGAATGGATTTTCAACCACATCTGCCTTATGGGTGCA 511
******** ****** ************************** *** ******** **
consensus_14927#0 AGTGTATTTATAGTATATTTAATTTTTTTTAGCGATTTATATTTCAGATACATGTAGAAC 1844
consensus_14927#1 AGTGTATTTATAGTAT-TTTAAATNTTTNTAGT-ATTTGTATTTCAGTTACATGTAGAAC 569
**************** ***** * *** *** **** ******** ************
consensus_14927#0 TTGAGAACATGAGATATGT--TCTTGTCGTTCA-TTAGTGTCAATATATTGCTGTTCGCT 1901
consensus_14927#1 TGGAGAACAGGATATATATGCTCTTGTTGTTCAATTAAAAAAAAAA-------------- 615
* ******* ** **** * ****** ***** *** ** *
consensus_14927#0 TGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACT 1961
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 GCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCT 2021
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 TATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGA 2081
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 GAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTTCACTTGT 2141
consensus_14927#1 ------------------------------------------------------------
consensus_14927#0 GAAAAAAAAAAAAAAAAAAA 2161
consensus_14927#1 --------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||