cluster # 14951

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Oryza sativa
cluster # 14951 cluster # 14951 Sequences # 19 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14951#0 length = 1620 sequences # 18

consensus_14951#1 length = 138 sequences # 1

consensusID : consensus_14951#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1620
fasta sequence

                              [GTCGCCGCCCGAGTCAAAAAGAGGGGGAAGCTTCTCCCACCATAGTCCTCCTCCTCCTCCTCCTACTCCCATCAACGACTAGTCGCGGCGACCAAGAGCCAAACCCTACGCCTCCTCCCCTCCCCCTCCACCTCGTCCTCCCCGCGAGCGGCGGCGGCCATGGATTCCTCCTCCGGCGGCGCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCCGCTACGTGCTGTACAACGTGTACGGGAACTTCTTCGAGGTCTCCTCCAAGTACGCCCCTCCCATCCGCCCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGAACGGCGAGGAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCAAGCGGACACTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAGAATATTATTGCCATAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATGTCTTGCACCGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAATTGTGATCTCAAGATTGCTGATTTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATGACAGAGTATGTGGTCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAA-CCCCTGTTTCCTGGAAGGGATTACATTCAGCAACTAAAATTGATCACTGAGCTGATAGGGTCGCCAGATGACTCAAGCCTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATGAAACAGC-TACCACAGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCA-TCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCC-ACCTGCCCAGC-ACCTTTCAGCTTTGATTTTGAGCAACCATCCT-TTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAG-CAATTTATCAATGCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTATTAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGGC-CTGTCTAAAGAAAC-AACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC-GGTTGA-TTGCATAACTGTTCTTATGTATCTAAGCCTGTAATTGTCTTCACAATGGCTTGAACTGCCCGTGTATATCTGAGTTGACATCTTCTCTCTGATATTAAAAAAAAAAAAAA]

[+] EMBL AK111579             [GTCGCCGCCCGAGTCAAAAAGAGGGGGAAGCTTCTCCCACCATAGTCCTCCTCCTCCTCCTCCTACTCCCATCAACGACTAGTCGCGGCGACCAAGAGCCAAACCCTACGCCTCCTCCCCTCCCCCTCCACCTCGTCCTCCCCGCGAGCGGCGGCGGCCATGGATTCCTCCTCCGGCGGCGCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCCGCTACGTGCTGTACAACGTGTACGGGAACTTCTTCGAGGTCTCCTCCAAGTACGCCCCTCCCATCCGCCCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGAACGGCGAGGAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCAAGCGGACACTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAGAATATTATTGCCATAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATGTCTTGCACCGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAATTGTGATCTCAAGATTGCTGATTTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATGACAGAGTATGTGGTCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAA CCCCTGTTTCCTGGAAGGGATTACATTCAGCAACTAAAATTGATCACTGAGCTGATAGGGTCGCCAGATGACTCAAGCCTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATGAAACAGC TACCACAGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCA TCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCC ACCTGCCCAGC ACCTTTCAGCTTTGATTTTGAGCAACCATCCT TTACTGAAGAAC  ATAAAAGAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAG CAATTTATCAATGCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTATTAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGGC CTGTCTAAAGAAAC AACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC GGTTGA TTGCATAACTGTTCTTATGTATCTAAGCCTGT                                                                              ]
[+] EMBL CF333488             [                                                        CTCCTCCTACTCCCATCAACGACTAGTCGCGGCGACCAAGAGCCAAACCCTACGCCTCCTCCCCTCCCCCTCCACCTCGTCCTCCCCGCGAGCGGCGGCGGCCATGGATTCCTCCTCCGGCGGCGCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCCGCTACGTGCTGTACAACGTGTACGGGAACTTCTTCGAGATCTCCTCCAAGTACGCCCCTCCCATCCGCCCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGAACGGCGAGGAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCAAGCGGACACTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAGAATATTATTGCCATAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATGTCTTGCACCGTGATCTGAAG CAAGCAATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB684298             [                                                                                 GTCGCGGCGACCAAGAGCCAAACCCTACGCCTCCTCCCCTCACCCTCCACCTCGTCCTCCCCGCGAGCGGCGGCGGCCATGGATTCCTCCTCCGGCGGCGCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCCGCTACGTGCTGTACAACGTGTACGGGAACTTCTTCGAGGTCTCCTCCAAGTACGCCCCTCCCATCCGCCCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGAACGGCGAGGAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCAAGCGGACACTGAGAGAAATCAAGCTGCTTCGCCACATGGACCATGAGAATATTATTGCCATAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATGTCTTGCACCGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAATTGTGATCTCAAGATTGCTGATTTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATGACAGAGTATGTGGTCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAA CCCCTGTTTCCTGGAAGGGA TACATTCAGCNACTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB639984             [                                                                                               GAGCCAAACCCTACGCCTCCTCCCCTCCCCCTCCACCTCGTCCTCCCCGCGAGCGGCGGCGGCCATGGATTCCTCCTCCGGCGGCGCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCCGCTACGTGCTGTACAACGTGTACGGGAACTTCTTTTTAGTCTCCTCCAAGTACGCCCCTCCCATCCGCCCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGAACGGCGAGGAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCAAGCGGACACTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAGAATATTATTGCCATAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB619228             [                                                                                                                                                            GCCATGGATTCCTCCTCCGGCGGCGCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCCGCTACGTGCTGTACAACGTGTACGGGAACTTCTTCGAGGTCTCCTCCAAGTACGCCCCTCCCATCCGCCCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGAACGGCGAGGAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCAAGCGGACACTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAGAATATTATTGCCATAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATGTCTTGCACCGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAATTGTGATCTCAAGATTGCTGATTTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATGACAGAGTATGTGGTCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAA CCCCTGTTTCCTGGAAGGGATTACATTCAGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB619269             [                                                                                                                                                            GCCCTTGATTCCTCCTCCGGCGGCGCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCCGCTACGTGCTGTACAACGTGTACGGGAACTTCTTCGAGGTCTCCTCCAAGTACGCCCCTCCCATCCGCCCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGAACGGCGAGGAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCAAGCGGACACTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAGAATATTATTGCCATAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATGTCTTGCACCGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAATTGTGATCTCAAGATTGCTGATTTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATGACAGAGTATGTGGTCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGANATTGTGACTCGTCAA CCCCTGTTTCCTGGAAGGGATTACATTCAGCAACTANAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF197143             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCACATGGACCACGAGAATATTATTGCCATAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATGTCTTGCACCGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAATTGTGATCTCAAGATTGCTGATTTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATGACAGAGTATGTGGTCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAACCCCCTGTTTCCTGNNNNNNATNACATTCAGNNACTAAAATTGATCACTGnnnn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB619270             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATGTGGTCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAA CCCCTGTTTCCTGGAAGGGATTACATTCAGCAACTAAAATTGATCACTGAGCTGATAGGGTCGCCAGATGACTCAAGCCTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATGAAACAGC TACCACAGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCA TCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCC ACCTGCCCAGC ACCTTTCAGCTTTGATTTTGAGCAACCATCCT TTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAG CAATTTATCAATGCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTATTAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGGC CTGTCTAAAGAAAC AACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACCNGGTTGA TTGCATAACTGTTCTTATG                                                                                           ]
[-] EMBL CB619229             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTGGTCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAA CCCCTGTTTCCTGGAAGGGATTACATTCAGCAACTAAAATTGATCACTGAGCTGATAGGGTCGCCAGATGACTCAAGCCTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATGAAACAGC TACCACAGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCA TCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCC ACCTGCCCAGC ACCTTTCAGCTTTGATTTTGAGCAACCATCCT TTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAG CAATTTATCAATGCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTATTAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGGC CTGTCTAAAGAAAC AACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC GGTTGA TTGCATAACTG                                                                                                   ]
[+] EMBL CB000802             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAA CCCCTGTTTCCTGGAAGGGATTACATTCAGCAACTAAAATTGATCACTGAGCTGATAGGGTCGCCAGATGACTCAAGCCTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATGAAACAGC TACCACAGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCA TCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCC ACCTGCCCAGC ACCTTTCAGCTTTGATTTTGAGCAACCATCCT TTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGAT                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA999180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AACTGCTCGCAGTATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAA CCCCTGTTTCCTGGAAGGGATTACATTCATCAACTAAGATTGATCACTGAGCTGATAGGGTCGCCAGATGACTCAAGCCTATGGTTTCTTCGGAGTGATAATGCAAGAATATACATGAAACAGC TACCACAGTACCCAAGGCACGACTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB684299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAA CCCCTGTTTCCTGGAAGGGATTACATTCAGCAACTAAAATTGATCACTGAGCTGATAGGGTCGCCAGATGACTCAAGCCTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATGAAACAGC TACCACAGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCA TCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCC ACCTGCCCAGC ACCTTTCAGCTTTGATTTTGAGCAACCATCCT TTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAG CAATTTATCAATGCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTATTAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGGC CTGTCTAAAGAAAC AACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC GGTTGA TTGCATAACTGTTCTTATGTATCTAAGCCTGTAATTGTCTTCACAATGGCTTGAACTGCCCGTGTATATCTGAGTTGACATCTTCTCT                      ]
[-] EMBL CA763089             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               acaagGGGTTTCTTNGGAGTGATAATGCAAGAAGATACATGAANCAGC TNCCCCAGTACCCAAGGCAGGACTTCCGCNTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCA TCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCC ACCTGCCCAGC ACCTTTCAGCTTTGATTTTGAGCAACCATCCT TTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAG CAATTTATCAATGCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTATTAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGGC CTGTCTAAAGAAAC AACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC GGTTGA TTGCATAACTGTTCTTATGTATCTAAGCCTGTAATTGTCTTCACAATGGCTTGAACTGCCCGTGTATATCTGAGTTGACATCTTCTCTCTGATATTAAAAAAAAAAAAAA]
[-] EMBL CF333489             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATGCAAGAAGATACATGAAACAGC TACCACAGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCATTCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCC ACCTGCCCAGCNACCTTTCAGCTTTGATTTTGAGCAACCATCCT TTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAG CAATTTATCAATGCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTATTAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGGC CTGTCTAAAGAAAC AACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC GGTTGA TTGCATAACTGTTCTTATGTATCTAAaaaaaa                                                                              ]
[-] EMBL BU672858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CATGAACCAGCTTACCACAGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCA TCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCC ACCTGCCCAGC ACCTTTCAGCTTTGATTTTGAGCCACCATCCT TTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAG CCATTTATCAATGCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCCAATCCCCTTGCTTTGTGCATCTATTAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACCATTTTTCTTAAGGC CTGTCTAAAGAAAC CACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC GGTTGA TTGCATAACTGTTCTTATGTATCTAAGCCTGTAATTGTCTTCACCATGGCTTGAACTGCCCGTGTATATCTGAGTTGACATCTTCTC                       ]
[+] EMBL BI812393             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACCCAACCTGCCCAGC ACCTTTCAGCTTTGATTTTGAGCAACCATCCTGTTACTGAAGAACATAT AAAGGACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAGCCCATTTATCAATGCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCCAATCCCCTTGCTTTGTGCATCTATTAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACCATTTTTCTTAAGGC CTGTCTAAAGAAAC AACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC GGTTGA TTGCATAACTGTTCTTATGTATCTAAGCCTGTAATTGTCTTCACCATGGCTTGAACTGCCCGTGTATATCTGAGTTGACATCTTCTCTCTGAAA  AAAAAAA       ]
[+] EMBL BI809702             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGGCACTGTCTAAAGAAACAAACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC GGTTGA TTGCAAAAaaaaaa                                                                                                ]
[+] EMBL BI795183             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgGGATTATTGTTATAGTGAC ATTTTTCTTAAGGC CTGTCTAAAGAAAC  ACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTATACC GGTTGATTTGCATAAaaa                                                                                                   ]




>consensus_14951#0
GTCGCCGCCCGAGTCAAAAAGAGGGGGAAGCTTCTCCCACCATAGTCCTCCTCCTCCTCC
TCCTACTCCCATCAACGACTAGTCGCGGCGACCAAGAGCCAAACCCTACGCCTCCTCCCC
TCCCCCTCCACCTCGTCCTCCCCGCGAGCGGCGGCGGCCATGGATTCCTCCTCCGGCGGC
GCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCCGCTACGTG
CTGTACAACGTGTACGGGAACTTCTTCGAGGTCTCCTCCAAGTACGCCCCTCCCATCCGC
CCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGAACGGCGAG
GAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCAAGCGGACA
CTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAGAATATTATTGCCATAAAGGAC
ATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATG
GATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAG
TACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATGTCTTGCAC
CGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAATTGTGATCTCAAGATTGCTGAT
TTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATGACAGAGTATGTGGTCACTCGT
TGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTC
TGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAACCCCTGTTTCCTGGAAGG
GATTACATTCAGCAACTAAAATTGATCACTGAGCTGATAGGGTCGCCAGATGACTCAAGC
CTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATGAAACAGCTACCACAGTACCCA
AGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAG
AAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCATCACCCA
TACTTGGCTTCTCTTCATGACATCAATGAAGAACCCACCTGCCCAGCACCTTTCAGCTTT
GATTTTGAGCAACCATCCTTTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCC
TTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAGCAATTTATCAATGCTGGCAT
CTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTATTAATTTTA
TGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGGC
CTGTCTAAAGAAACAACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATTA
TACCGGTTGATTGCATAACTGTTCTTATGTATCTAAGCCTGTAATTGTCTTCACAATGGC
TTGAACTGCCCGTGTATATCTGAGTTGACATCTTCTCTCTGATATTAAAAAAAAAAAAAA

consensusID : consensus_14951#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 138
fasta sequence

                              [GAGTAGAAAATGGATTATTGTTATAGTGACAATTTTTCTTAAGGCCTGTCTAAAGAAACAACATTTGTATTCCTTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF316693             [GAGTAGAAAATGGATTATTGTTATAGTGACAATTTTTCTTAAGGCCTGTCTAAAGAAACAACATTTGTATTCCTTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14951#1
GAGTAGAAAATGGATTATTGTTATAGTGACAATTTTTCTTAAGGCCTGTCTAAAGAAACA
ACATTTGTATTCCTTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14951#0      GTCGCCGCCCGAGTCAAAAAGAGGGGGAAGCTTCTCCCACCATAGTCCTCCTCCTCCTCC 60
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      TCCTACTCCCATCAACGACTAGTCGCGGCGACCAAGAGCCAAACCCTACGCCTCCTCCCC 120
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      TCCCCCTCCACCTCGTCCTCCCCGCGAGCGGCGGCGGCCATGGATTCCTCCTCCGGCGGC 180
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      GCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCCGCTACGTG 240
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      CTGTACAACGTGTACGGGAACTTCTTCGAGGTCTCCTCCAAGTACGCCCCTCCCATCCGC 300
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      CCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGAACGGCGAG 360
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      GAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCAAGCGGACA 420
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      CTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAGAATATTATTGCCATAAAGGAC 480
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      ATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTGAGTTGATG 540
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      GATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACCACTGCCAG 600
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      TACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATGTCTTGCAC 660
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      CGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAATTGTGATCTCAAGATTGCTGAT 720
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      TTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATGACAGAGTATGTGGTCACTCGT 780
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      TGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTATTGATGTC 840
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      TGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAACCCCTGTTTCCTGGAAGG 900
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      GATTACATTCAGCAACTAAAATTGATCACTGAGCTGATAGGGTCGCCAGATGACTCAAGC 960
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      CTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATGAAACAGCTACCACAGTACCCA 1020
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      AGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATCTGTTAGAG 1080
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      AAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTCATCACCCA 1140
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      TACTTGGCTTCTCTTCATGACATCAATGAAGAACCCACCTGCCCAGCACCTTTCAGCTTT 1200
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      GATTTTGAGCAACCATCCTTTACTGAAGAACATATAAAAGAACTCATCTGGAGGGAATCC 1260
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      TTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAGCAATTTATCAATGCTGGCAT 1320
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      CTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTATTAATTTTA 1380
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      TGCCCACTTGTTGGGCGAAT-GAGCATGGATTATTGTTATAGTGACAATTTTTCTTAAGG 1439
consensus_14951#1      ----------------GAGTAGAAAATGGATTATTGTTATAGTGACAATTTTTCTTAAGG 44
                                       ** * **  ***********************************

consensus_14951#0      CCTGTCTAAAGAAACAACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGCCTGTATT 1499
consensus_14951#1      CCTGTCTAAAGAAACAACATTTGTATTCCTTATCAAAAAAAAAAAAAAAAAAAAAAAAAA 104
                       *********************************** * *     **           *  

consensus_14951#0      ATACCGGTTGATTGCATAACTGTTCTTATGTATCTAAGCCTGTAATTGTCTTCACAATGG 1559
consensus_14951#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------------- 138
                       * *       *    * **        *   *                            

consensus_14951#0      CTTGAACTGCCCGTGTATATCTGAGTTGACATCTTCTCTCTGATATTAAAAAAAAAAAAA 1619
consensus_14951#1      ------------------------------------------------------------
                                                                                   

consensus_14951#0      A 1620
consensus_14951#1      -