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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14987#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1566 fasta sequence
[CGGACTCCTCCGCCGCCGCGTCCCCCGTCTCTCTCGACGACGCCTCGACTGACGAGAGGAGGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGAGGGCGAGGAAGAGGAGGAGGCTTGTGCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCAT-GTTGAAT-CCA-TTGACATGGCAAATGATCTGCACTCTA-TTGGT-GGATTAGA-TCCCCTACTT-GGTT-AC-TTGAAAAATTCACATGC-TGGCATCAGAGCAAAGGCTGCAGAGGTTGTGAGCACGATTGTGCAAAATAACCCCAAGAGCCAGCAACTTGTCATGGAATCTAATGGCCTGGAGCCACTGTTGACAAACTTCAGTTCCGATGCAAGCACGAATTCACGCACAAAAGCTCTTGGAGCAATATCATCTCTAATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTGAGAGACGCTCTTGGTTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCATCTCCTACAGTACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTC-TTCCAAAGCTGATGATG-CACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTG-TTAC-AA-CGA-G-CCGTCGTC-TCT-C-AGGGA-G-AAGGGT-CTT-GTT-GTGCTTCCTGGAGAGGATGCACCTCAACAG-CCA-CCACCGGATGTCGTTGGCAGCATGTTTGAG-CCGCCGCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATACTTATCTCTTCCACGAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK101448 [CGGACTCCTCCGCCGCCGCGTCCCCCGTCTCTCTCGACGACGCCTCGACTGACGAGAGGAGGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGAGGGCGAGGAAGAGGAGGAGGCTTGTGCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGGGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCAT GTTGAAT CCA TTGACATGGCAAATGATCTGCACTCTA TTGGT GGATTAGA TCCCCTACTT GGTT AC TTGAAAAATTCACATGC TGGCATCAGAGCAAAGGCTGCAGAGGTTGTGAGCACGATTGTGCAAAATAACCCCAAGAGCCAGCAACTTGTCATGGAATCTAATGGCCTGGAGCCACTGTTGACAAACTTCAGTTCCGATGCAAGCACGAATTCACGCACAAAAGCTCTTGGAGCAATATCATCTCTAATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTGAGAGACGCTCTTGGTTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCATCTCCTACAGTACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTC TTCCAAAGCTGATGATG CACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTG TTAC AA CGA G CCGTCGTC TCT C AGGGA G AAGGGT CTT GTT GTGCTTCCTGGAGAGGATGCACCTCAACAG CCA CCACCGGATGTCGTTGGCAGCATGTTTGAG CCGCCGCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATACTTAT ]
[+] EMBL CB648677 [ CGACGCCTCTACTGACGAGAGGAGGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGAGGGCGAGGAAGAGGAGGAGGCTTGTGCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCAT GTTGAAT CCA TTGACATGGCAAATGATCTGCACTCTA TTGGT GGATTAGA TCCCCTACTT GGTT AC TTGAAAAATTCACATGC TGGCATCAGAGCAAAGGCTGCAGAGGTTGTGAGCACGATTGTGCAAAATAACCCCAAGAGCCAGCAACTTGTCATGGAATCTAATGGCCTGGAGCCACTGTTGACAAACTTCAGTTCCGATGCAAGCACGAATTCACGCACAAAAGCTCTTGGAGCAATATCATCTCTAATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTGAGAGACGCTCTTGGNTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCATCTCCTAC ]
[+] EMBL CB648679 [ CGACGCCTCGACTGACGAGAGGAGGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGAGGGCGAGGAAGAGGAGGAGGCTTGTGCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCAT GTTGAAT CCA TTGACATGGCAAATGATCTGCACTCTA TTGGT GGATTAGA TCCCCTACTT GGTT AC TTGAAAAATTCACATGC TGGCATCAGAGCAAAGGCTGCAGAGGTTGTGAGCACGATTGTGCAAAATAACCCCAAGAGCCAGCAACTTGTCATGGAATCTAATGGCCTGGAGCCACTGTTGACAAACTTCAGTTCCGATGCAAGCACGAATTCACGCACAAAAGCTCTTGGAGCAATATCATCTCTAATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTGAGAGACGCTCTTGGTTCTGATGATGCTAGACTTCAGAGGAAA ]
[+] EMBL CB649073 [ CGACGCCTCTACTGACGAGAGGAGGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGAGGGCGAGGAAGAGGAGGAGGCTTGTGCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCAT GTTGAAT CCA TTGACATGGCAAATGATCTGCACTCTA TTGGT GGATTAGA TCCCCTACTT GGTT AC TTGAAAAATTCACATGC TGGCATCAGAGCAAAGGCTGCAGAGGTTGTGAGCACGATTGTGCAAAATAACCCCAAGAGCCAGCAACTTGTCATGGAATCTAATGGCCTGGAGCCACTGTTGACAAACTTCAGTTCCGATGCAAGCACGAATTCACGCACAAAAGCTCTTGGAGCAATATCATCTCTAATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTGAGAGACGCTCTTGGTTCT ]
[+] EMBL C28534 [ GCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCATNTTTGAATCCCATTTGACATGGC AATGATCTNCACTCTATTTGGT GGATTAGATTCCCCTACTTGGGTTAAT TTGAAAAATTCCCATNCTTGGCAT ]
[+] EMBL AU068107 [ CGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCAT GTTGAAT CCA TTGACATGGCAAATGATCTGCACTCTA TTGGT GGATTAGA TCCCCTACTT GGTT AC TTGAAAAATT ]
[+] EMBL C72387 [ TGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGG GACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCAT GTTGAAT CCA TTGACATGGCAAATGATCTGCACTCTA TTGGTGGGATTAGA TNCCCTACTTGGGTT ACTTTGAAA ]
[+] EMBL CF303745 [ AAACTTCAGTTCCGATGCAAGCACGAATTCACGCACAAAAGCTCTTGGAGCAATATCATCTCTAATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTGAGAGACGCTCTTGGTTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCATCTCCTACAGTACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTC TTCCAAAGCTGATGATG CACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTG TTAC AA CGA G CC ]
[-] EMBL CB648680 [ TCTTGGTTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCATCTCCTACAGTACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTC TTCCAAAGCTGATGATG CACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTG TTAC AA CGA G CCGTCGTC TCT C AGGGA G AAGGGT CTT GTT GTGCTTCCTGGAGAGGATGCACCTCAACAG CCA CCACCGGATGTCGTTGGCAGCATGTTTGAG CCGCCGCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGGAGATGAAAGATACTTATCTCTTCCACGATTTAAAAAAAAgga ]
[+] EMBL AU082655 [ CAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTC TTCCAAAGCTGATGATGCCACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAANTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTN TTAC AA CGA G CCGTCGTC TCT C AGGGA G AAGGGT CTT GTT GTGCTTCCTGGAGAGGATGCACCTCAACAG CCA CCACCGGATGTCGTTGGCAGCATGTTTGAG CCGCC CTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATAAAAA AAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB648678 [ GGCTGATAGGAGTGTTGCTACAGAGCTTGGTC TTCCAAAGCTGATGATG CACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTG TTAC AA CGA G CCGTCGTC TCT C AGGGA G AAGGGT CTT GTT GTGCTTCCTGGAGAGGATGCACCTCAACAG CCA CCACCGGATGTCGTTGGCAGCATGTTTGAG CCGCCGCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATAAGGAGATGAAAGATACTTATCTCTTCCCCGATTAAAAAAAAAga ]
[+] EMBL AU068108 [ aaGCTGATAGGAGTNTTCCTACAGAGTTTGGTCTTTCCAAAGCTGATGATG CACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTNCCTTAGGTGGTCTTCTCGAG TGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTG TTAC AA CGA G CCGTCGTC TCT C AGGGA G AAGGGT CTT GTT GTGCTTCCTGGAGAGGATGCACNTCAACAG CCA CCACCGGATGTCGTTGGCAGCATGTTTGAN CCGC CTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATACTTATCTCTTCCACGAAAAAAA ]
[-] EMBL CA763306 [ GCTTGGTC TTCCAAAGTTGTTGATG CACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGCCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGCGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCCCAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTG TTAC AA CGA G CCGTCGTC TCT C AGGGA G AAGGGT CTT GTT GTGCCCCCTGGAGAGGATGCCCCTCAACAG CCC CCCCCGGATGTCGTTGGCAGCATGTTTGAG CCCCCGCTTCGCGCTTGGGCAGCATCAAGGCCCCCTCCCAAAGAAGATTCAGAGTCTGAGAGCCCCAAGAAGGATCCCCCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTTGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATACTTATCTCTTCCAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU182266 [ GGACTCCCTCTGGAAGGAGTG TTACAAA CGA G CCGTCGTC TCT C AGGNA G AAGGGT CTT GTT GTGCTTCCTGGANAGGATGCACCTCAACAG CCA CCACCGGATGTCGTTGGCAGCATGTTTGAG CCGCCGCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATACTTATCTCTTCCA AAAAAAAAA ]
[+] EMBL AU165483 [ CCCTCTGGAANGAGTGTTTAC AACCGATGCCCGTCGTCTTCTNCAAGGGACGAAAGGGTCCTTCGTTCGTGCCTCCTGGAGAGGATGCACCTCAACAGCCCA CCACCGGATGTCGTTGGCAGCATGTTTGAG CCGCC TCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATACTTATCTCTTCCA AAAAAAAAcac ]
[+] EMBL AU181268 [ TTAC AA CGA G CCGTCGTC TCT C AGGGA G AAGGGT CTT GTT GTGCTTCCTGGAGAGGATGCACCTCAACAG CCA CCACCGGATGTCGTTGGCAGCATGTTTGAN CCGCCGCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAANAAGATTCAGAGTNTGAGAGCGCCAAGAAGGATCCNCCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATACTTATCTCTTCNA AAAAAAAAAAAAAA ]
[+] EMBL AU031654 [ GAGNGGATGCACCTCAACAN CCACCCACCGGATGTCGTTGGCANCATGTTTGAGCCCGNCCCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATNCAGAGTCTGNGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATACTTATCTCTTCCACGAAAAAA ]
consensusID : consensus_14987#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1305 fasta sequence
[CTCCTCCGCCGCCGCGTCCCCCGTCTCTCTCGACGACGCCTCGACTGACGAGAGGAGGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGGGGGCGAGGAAGAGGAGGAGGCTTGTGCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCATGTTGAATCCATTGACATGGCAAATGCTCTAATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTGAGAGACGCTCTTGGTTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCATCTCCTACAGTACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTCTTCCAAAGCTGATGATGCACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTGTTACAACGAGCCGTCGTCTCTCAGGGAGAAGGGTCTTGTTGTGCTTCCTGGAGAGGATGCACCTCAACAGCCACCACCGGATGTCGTTGGCAGCATGTTTGAGCCGCCGCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATAC]
[+] EMBL AK061682 [CTCCTCCGCCGCCGCGTCCCCCGTCTCTCTCGACGACGCCTCGACTGACGAGAGGAGGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGGGGGCGAGGAAGAGGAGGAGGCTTGTGCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAACCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAACGGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGTGAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAGAGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGTGTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCATGTTGAATCCATTGACATGGCAAATGCTCTAATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTGAGAGACGCTCTTGGTTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCATCTCCTACAGTACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTCTTCCAAAGCTGATGATGCACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTGTTACAACGAGCCGTCGTCTCTCAGGGAGAAGGGTCTTGTTGTGCTTCCTGGAGAGGATGCACCTCAACAGCCACCACCGGATGTCGTTGGCAGCATGTTTGAGCCGCCGCTTCGCGCTTGGGCAGCATCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTGCTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGCAATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTGCATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGTGATGCTATTAAAATACGAAGATGAAAGATAC]
[+] EMBL OSR02731A [ AGACTTCAGAGGAAAGCTCTCCATCTCCTACAGTACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTCTTCCAAAGCTGATGATGCACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGTCTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGACAAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGATCTCTCCGCACATCGTGAGGAGCGACANTTTGTGGACTCCCTCTGGAAGGAGTGTTACAACGAGCCGTCGTCTCTCAGGGAGAAGGGTCTTGTTGTGCTTCCTGGAGAGGTTGCACTTCAACAG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14987#0 CGGACTCCTCCGCCGCCGCGTCCCCCGTCTCTCTCGACGACGCCTCGACTGACGAGAGGA 60
consensus_14987#1 ----CTCCTCCGCCGCCGCGTCCCCCGTCTCTCTCGACGACGCCTCGACTGACGAGAGGA 56
********************************************************
consensus_14987#0 GGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGAGGGCGAGGAAGAGGAGGAGGCTTGT 120
consensus_14987#1 GGAGACCTCTCCCTCCCATAAAAGGGGGAGGACGGGGGCGAGGAAGAGGAGGAGGCTTGT 116
********************************** *************************
consensus_14987#0 GCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAA 180
consensus_14987#1 GCTGCTTCGTCTTTTCCCGCCGCCGCGCACCGACGCCTGAACCAACTGTCTCGCCGTGAA 176
************************************************************
consensus_14987#0 CCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAAC 240
consensus_14987#1 CCCTCGCCGGAGTTGGTAGAGGAGGAGATGGCCAAGGACGGAGGAGGGCCCGACTGGAAC 236
************************************************************
consensus_14987#0 GGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGT 300
consensus_14987#1 GGCCTGCTCAAGTGGAGCCTCGCCCATGGCGACGGCACCGCCAAGCCGCGCTCGCTCAGT 296
************************************************************
consensus_14987#0 GAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAG 360
consensus_14987#1 GAGGAGGACAAGAAATGGTTTATGGAGGCAATGCAAGCTAATACAATGGATGTTGTTAAG 356
************************************************************
consensus_14987#0 AGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGT 420
consensus_14987#1 AGGATGAAGGAGATCACCCAAGTGATGAAAACTCCAGATGATGTACTACAGTCTCAAGGT 416
************************************************************
consensus_14987#0 GTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCATGTTGAATCCATT 480
consensus_14987#1 GTGACTCCAGAGAACATCGAAGATATGTTGGATGAGTTACAGGAGCATGTTGAATCCATT 476
************************************************************
consensus_14987#0 GACATGGCAAATGATCTGCACTCTATTGGTGGATTAGATCCCCTACTTGGTTACTTGAAA 540
consensus_14987#1 GACATGGCAAATG----------------------------------------------- 489
*************
consensus_14987#0 AATTCACATGCTGGCATCAGAGCAAAGGCTGCAGAGGTTGTGAGCACGATTGTGCAAAAT 600
consensus_14987#1 ------------------------------------------------------------
consensus_14987#0 AACCCCAAGAGCCAGCAACTTGTCATGGAATCTAATGGCCTGGAGCCACTGTTGACAAAC 660
consensus_14987#1 ------------------------------------------------------------
consensus_14987#0 TTCAGTTCCGATGCAAGCACGAATTCACGCACAAAAGCTCTTGGAGCAATATCATCTCTA 720
consensus_14987#1 -------------------------------------------------------CTCTA 494
*****
consensus_14987#0 ATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTG 780
consensus_14987#1 ATTCGTCATAACCAGCCAGGAGTTGCTGCATTCCGCCTGGGAAATGGCTACTCTGCACTG 554
************************************************************
consensus_14987#0 AGAGACGCTCTTGGTTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCATCTCCTACAG 840
consensus_14987#1 AGAGACGCTCTTGGTTCTGATGATGCTAGACTTCAGAGGAAAGCTCTCCATCTCCTACAG 614
************************************************************
consensus_14987#0 TACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTCTTCCAAAG 900
consensus_14987#1 TACCTACTGCACGACAACAAGGCTGATAGGAGTGTTGCTACAGAGCTTGGTCTTCCAAAG 674
************************************************************
consensus_14987#0 CTGATGATGCACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGT 960
consensus_14987#1 CTGATGATGCACCTGGCATCGAGTGATGATTCTGGAGTCCGGGAGGCTGCCTTAGGTGGT 734
************************************************************
consensus_14987#0 CTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGAC 1020
consensus_14987#1 CTTCTCGAGCTGGCGCGGGACAATACATCCGGTGCTGGAAACGTGCTACCTGACCAAGAC 794
************************************************************
consensus_14987#0 AAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGAT 1080
consensus_14987#1 AAGCTGAAAGATGTCCTTAAGAGCCGAATCGAAGGCATCAGCACAATGGATGCCGACGAT 854
************************************************************
consensus_14987#0 CTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTGTTACAAC 1140
consensus_14987#1 CTCTCCGCACATCGTGAGGAGCGACAGCTTGTGGACTCCCTCTGGAAGGAGTGTTACAAC 914
************************************************************
consensus_14987#0 GAGCCGTCGTCTCTCAGGGAGAAGGGTCTTGTTGTGCTTCCTGGAGAGGATGCACCTCAA 1200
consensus_14987#1 GAGCCGTCGTCTCTCAGGGAGAAGGGTCTTGTTGTGCTTCCTGGAGAGGATGCACCTCAA 974
************************************************************
consensus_14987#0 CAGCCACCACCGGATGTCGTTGGCAGCATGTTTGAGCCGCCGCTTCGCGCTTGGGCAGCA 1260
consensus_14987#1 CAGCCACCACCGGATGTCGTTGGCAGCATGTTTGAGCCGCCGCTTCGCGCTTGGGCAGCA 1034
************************************************************
consensus_14987#0 TCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTG 1320
consensus_14987#1 TCAAGGCCACCTCCCAAAGAAGATTCAGAGTCTGAGAGCGCCAAGAAGGATCCACCATTG 1094
************************************************************
consensus_14987#0 CTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGC 1380
consensus_14987#1 CTGCTAGGCCCTGGACCGTCTTCCTAGACTTGTTGGGATTGCTTAGTTTTTCGCTTATGC 1154
************************************************************
consensus_14987#0 AATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTG 1440
consensus_14987#1 AATTCTCTAGACTTAACCTTAAAAAGATCCTACATATTTGCAATCTGCTGAAATTCTCTG 1214
************************************************************
consensus_14987#0 CATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGT 1500
consensus_14987#1 CATTTTAATCCTGTCCTGAGCTCTTGGATGTATTGAGGTTTTTGGATATCTGTAATCTGT 1274
************************************************************
consensus_14987#0 GATGCTATTAAAATACGAAGATGAAAGATACTTATCTCTTCCACGAAAAAAAAAAAAAAA 1560
consensus_14987#1 GATGCTATTAAAATACGAAGATGAAAGATAC----------------------------- 1305
*******************************
consensus_14987#0 AAAAAA 1566
consensus_14987#1 ------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||