cluster # 14994

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Oryza sativa
cluster # 14994 cluster # 14994 Sequences # 19 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14994#0 length = 1131 sequences # 12
consensus_14994#1 length = 505 sequences # 1
consensus_14994#2 length = 343 sequences # 1

consensus_14994#3 length = 337 sequences # 1
consensus_14994#4 length = 313 sequences # 2
consensus_14994#5 length = 271 sequences # 1
consensus_14994#6 length = 227 sequences # 1

consensusID : consensus_14994#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1131
fasta sequence

                              [TCCACCTAGCTCTAGAGCCTTCCCTCTCCTCCTCCTCCACATCCACCGGAGAGAGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGG-AGAAGGTGCTGGCGGCGCCGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGCGCCGCGCCGCTGGGGCTCTGCGTCGCCGCCATGGCCATCATGCTCCGCAACTCGGTCACCAACGAGTACGGCACCGTCTCCTACTCCGACCTCGGCGGCTTCAAGTACCT-GGTGTACGCGAACGGGCTCTGCGCCGCCTACTCGCTGGCGTCGGCGTTCTACATCGCCGTGCCGAGGCCGGCGACGTTGTCCCGCTCCTGGGTCGTTTTCCTCCTCGACCAGGTGTTCACGTACCTGATCCTGGCAGCGGGGGCGGCGTCGGCGGAGCTACTGTACCTGGCGTACAACGGCGACAAGGAGGTGACGTGGAGCGAGGCGTGCGGCGTCTTCGGTGGATTCTGC-CGGCAGGCGAGGACGTCGGTGGCCATCACCTTCGCCTCCGTTGCCTGCTACATCCTCCTCTCCCTCATCTCCTCCTACCGCCTCTTCAGCGCCTACGACCCACCCCAGCCTTCCCTCGGCAACAAGGGCGTCGAGATCGCCGCCTTCCCCCGCTGATCGCCGCCGCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCGTCATATACTCATATATCTCTACTCGAACTCGTGGTATGTATGGTTGTTGATTCGATCAGCTGTGGTGAACTGATTGACCCGTTACAAAGGGTGCAAACTGGATATGTATCTCGGTTAGAGAATGGGTGGTCTAATTTGAGATCTTGAATGGGTGTTGCTTAAAAA]

[+] EMBL AK061149             [TCCACCTAGCTCTAGAGCCTTCCCTCTCCTCCTCCTCCACATCCACCGGAGAGAGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGG AGAAGGTGCTGGCGGCGCCGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGCGCCGCGCCGCTGGGGCTCTGCGTCGCCGCCATGGCCATCATGCTCCGCAACTCGGTCACCAACGAGTACGGCACCGTCTCCTACTCCGACCTCGGCGGCTTCAAGTACCT GGTGTACGCGAACGGGCTCTGCGCCGCCTACTCGCTGGCGTCGGCGTTCTACATCGCCGTGCCGAGGCCGGCGACGTTGTCCCGCTCCTGGGTCGTTTTCCTCCTCGACCAGGTGTTCACGTACCTGATCCTGGCAGCGGGGGCGGCGTCGGCGGAGCTACTGTACCTGGCGTACAACGGCGACAAGGAGGTGACGTGGAGCGAGGCGTGCGGCGTCTTCGGTGGATTCTGC CGGCAGGCGAGGACGTCGGTGGCCATCACCTTCGCCTCCGTTGCCTGCTACATCCTCCTCTCCCTCATCTCCTCCTACCGCCTCTTCAGCGCCTACGACCCACCCCAGCCTTCCCTCGGCAACAAGGGCGTCGAGATCGCCGCCTTCCCCCGCTGATCGCCGCCGCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGAT                                                                                                                                                                             ]
[+] EMBL C27009               [               AGCCTTCCCTCTCCTCCTCCTCCACATCCACCGGAGAGAGTGTGTTTATTGTTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGG AGAAGGTGCTGGCGGNG CGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTNGGNGGCGGCGGCGCGTGTGCGGNCCGTCGAGACGCTCCTCCGCGCCGCGACGCTGGGGCTCTGCTTCGCCGACATGGCCATCATGCTCCG AACTCGGTCAACAACGAGTACGGCA CNTNTCCTACTACGACCTCGGCGGCTTCAAGTACCTNGGT TACGC AACGGG TTTTCGCCG CTACTCGTTGG GTCGGCGTTCTAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB646223             [                GCCTTCCCTCTCCTCCTCCTCCACATCCACCGGAGAGAGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGG AGAAGGTGCTGGCGGCGCCGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGCGCCGCGCCGCTGGGGCTCTGCGTCGCCGCCATGGCCATCATGCTCCGCAACTCGGTCACCAACGAGTACGGCACCGTCTCCTACTCCGACCTCGGCGGCTTCAAGTACCT GGTGTACGCGAACGGGCTCTGCGCCGCCTACTCGCTGGCGTCGGCGTTCTACATCGCCGTGCCGAGGCCGGCGACGTTGTCCCGCTCCTGGGTCGTTTTCCTCCTCGACCAGGTGTTCACGTACCTGATCCTGGCAGCGGGGGCGGCGTCNGCGGAGCTACTGTACCTGGCGTACTACGGCGACAAGGAGGTGACTTGGAGCGAGGCGTGCGGAGACTTCGGTGGATTCTGCTCCGCAGGCCATGACTTCCGTGGTCATCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSS0792A             [                                                        GTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGG AGAAGGTGCTGGCGGCGCCGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGCGCCGCGCCGCTGGGGCTCTGCGTCGACGCCATGGCCATCATGCTCCGCAACTCGGTCACCAACGAGTACGGCACCGTCTCCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C93457               [                                                                          AGGAGAGATGTCCAAGATGGCGGAGG AGAAGGTGCTGGCGGCGCCGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGNGGCGGCGGCGCGTNTCCGGCCCGTNGAGACGCTCCTCCGCNCNG GCCGCTGGGGCTCTNCTTCGCCGCCATGGCCATCATGCTCCGCAACTNGGTCACCAACGAGTACGGCACCGTNTCCTACTCCNACCTCGGCGGCTTCAAGTACCT GGTGTACGCAAACGGGCTCTGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C27915               [                                                                                              CGNAGGNAGAAGGTGCTGGCGGCG CGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTNCGGCCCGTCGAGACGCTCCTCCGCGCCG GCCGCTGGGGCTCTNCTTCGCCGCCATGGCCATCATGCTCCGCAACTNGGTCACCAACGAGTACGGCACCGTNTCCTACTCCAACCTCGGCGGCTTCAAGTACCT GGTGTACGCAAACGGGCTCTTCGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB646224             [                                                                                                                                                                                                                                                                                                                                                 CGGGCTCTGCGCCGCCTACTCGCTGGCGTCGGCGTTCTACATCGCCGTGCCGAGGCCGGCGACGTTGTCCCGCTCCTGGGTCGTTTTCCTCCTCGACCAGGTGTTCACGTACCTGATCCTGGCAGCGGGGGCGGCGTCGGCGGAGCTACTGTACCTGGCGTACAACGGCGACAAGGAGGTGACGTGGAGCGAGGCGTGCGGCGTCTTCGGTGGATTCTGC CGGCAGGCGAGGACGTCGGTGGCCATCACCTTCGCCTCCGTTGCCTGCTACATCCTCCTCTCCCTCATCTCCTCCTACCGCCTCTTCAGCGCCTACGACCCACCCCAGCCTTCCCTCGGCAACAAGGGCGTCGAGATCGCCGCCTTCCCCCGCTGATCGCCGCCGCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCGTCATATACTCATATATCTCTACTCGAACTCGTGGTATGTATGGTTGTTGATTCGATCAGCTGTGGTGAACTGATTGACCCGTTTCAAAGGGTGCAAACTGGATATGT                                                          ]
[+] EMBL AU092440             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACGTGGAGCGAGGCGTGCGGCGTCTTCGGTGGATTCTGC CGGCAGGCGAGGACGTCGGTGGCCATCACCTTCGCCTCCGTTGCCTGCTACATCCTCCTCTCCCTCATCTCCTCCTACCGCCTCTTCAGCGCCTACGACCCACCCCAGCCTTCCCTCGGCAACAAGGGCGTCGAGATCGCCGCCTTCCCCCGCTGATCGCCGCCGCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAAaaa                                                                                                                                                                                                                                 ]
[+] EMBL BM420367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTTCAGCGCCTACGACCCACCCCAGCCTTCCCTCGGCAACAAGGGCGTCGAGATC CCGCCTTCCCCCGCTGATCGCCGCCGCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTNACCTGATCATGATCATCGTCGTCATATACTCATATATCTCTACTCGAACTCGTGGTATGTATGGTTGTTGATTCGATCAGCTGTGGTGAACCGATTGACCCGTTACAA  GATTC AACTGGATATGTATCTCGGTTAGAGAATGGGTGGTCTAATTTGAGATCTTGAATGGGTGTTGCTTAAAAA]
[+] EMBL D42699               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCACCCCAGCCTTCCCTCGGCAACAAGGTCGTCGAGATCGCCGCCTTCCCCCGCTGATCGCCGCCGCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAG ATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGC                                                                                                                                                                                                                                           ]
[+] EMBL AU096286             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTCCCTCGGCAACAAGGGCGTCGAGATCGCCGCCTTCCCCCGCTGATCGCCGCCGCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCGTCATATACTCATAaaaaaa                                                                                                                                                  ]
[-] EMBL AU225369             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgctTCGTCATATACTCATATATCTCTACTCGAACTCGTGGTATGTATGGTTGTTGATTCGATCAGCTGTGGTGAACTGATTGACCCGTTAAAAAGcggc                                                                        ]




>consensus_14994#0
TCCACCTAGCTCTAGAGCCTTCCCTCTCCTCCTCCTCCACATCCACCGGAGAGAGTGTGT
TTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGGAGAAGGTGCTGGCGGCGCCG
GCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCG
GCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGCGCCGCGCCGCTGGGGCTCTGCGTCGCC
GCCATGGCCATCATGCTCCGCAACTCGGTCACCAACGAGTACGGCACCGTCTCCTACTCC
GACCTCGGCGGCTTCAAGTACCTGGTGTACGCGAACGGGCTCTGCGCCGCCTACTCGCTG
GCGTCGGCGTTCTACATCGCCGTGCCGAGGCCGGCGACGTTGTCCCGCTCCTGGGTCGTT
TTCCTCCTCGACCAGGTGTTCACGTACCTGATCCTGGCAGCGGGGGCGGCGTCGGCGGAG
CTACTGTACCTGGCGTACAACGGCGACAAGGAGGTGACGTGGAGCGAGGCGTGCGGCGTC
TTCGGTGGATTCTGCCGGCAGGCGAGGACGTCGGTGGCCATCACCTTCGCCTCCGTTGCC
TGCTACATCCTCCTCTCCCTCATCTCCTCCTACCGCCTCTTCAGCGCCTACGACCCACCC
CAGCCTTCCCTCGGCAACAAGGGCGTCGAGATCGCCGCCTTCCCCCGCTGATCGCCGCCG
CCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCA
GCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGAT
TAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTT
TAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCA
TCGTCGTCATATACTCATATATCTCTACTCGAACTCGTGGTATGTATGGTTGTTGATTCG
ATCAGCTGTGGTGAACTGATTGACCCGTTACAAAGGGTGCAAACTGGATATGTATCTCGG
TTAGAGAATGGGTGGTCTAATTTGAGATCTTGAATGGGTGTTGCTTAAAAA

consensusID : consensus_14994#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 505
fasta sequence

                              [CACATCCACCGGAGAGAGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGGAGAAGGTGCTGGCGGCGCCGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGCGCCGCGCCGCTGGGGCTCTGCGTCGCCGCCATGGCCATCATGCTCCGCAACTCGGTCACCAACGAGTACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCGTCATATACTCATATATCTCTACTCG]

[+] EMBL AK060229             [CACATCCACCGGAGAGAGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGGAGAAGGTGCTGGCGGCGCCGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGCGCCGCGCCGCTGGGGCTCTGCGTCGCCGCCATGGCCATCATGCTCCGCAACTCGGTCACCAACGAGTACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCGTCATATACTCATATATCTCTACTCG]




>consensus_14994#1
CACATCCACCGGAGAGAGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGG
AGGAGAAGGTGCTGGCGGCGCCGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACC
TGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGCGCCG
CGCCGCTGGGGCTCTGCGTCGCCGCCATGGCCATCATGCTCCGCAACTCGGTCACCAACG
AGTACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACT
AAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTA
ATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTT
CTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCG
TCATATACTCATATATCTCTACTCG

consensusID : consensus_14994#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 343
fasta sequence

                              [AGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGGAGAAGGTGCTGGCGGCGCGGCCACCGTNGACGGCGGGATGCAGTTCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTNGAGACGCTCCTCCGCGCCGGCCGCTGGGGCTCTGCGTNGCGCATGGCATCATGTCCGAGCTCGNCACAACGATACGNACCGNTCCTACTCCNCCTCGCGCTTAAGACCTGGTNACGCAACGGCTCTCGNGCTACTCGTGCGTGCGTCACATAGCGTCCAGCCGCGCGTGTCCGTCTGGTCGTTTCTCTCACAGTTCACG]

[+] EMBL OSS13332A            [AGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGGAGAAGGTGCTGGCGGCGCGGCCACCGTNGACGGCGGGATGCAGTTCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTNGAGACGCTCCTCCGCGCCGGCCGCTGGGGCTCTGCGTNGCGCATGGCATCATGTCCGAGCTCGNCACAACGATACGNACCGNTCCTACTCCNCCTCGCGCTTAAGACCTGGTNACGCAACGGCTCTCGNGCTACTCGTGCGTGCGTCACATAGCGTCCAGCCGCGCGTGTCCGTCTGGTCGTTTCTCTCACAGTTCACG]




>consensus_14994#2
AGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGGAGAAGGTGCTGGC
GGCGCGGCCACCGTNGACGGCGGGATGCAGTTCTCCGGGGACCTGCAGGCTTCGTCGGCG
GCGGCGGCGCGTGTGCGGCCCGTNGAGACGCTCCTCCGCGCCGGCCGCTGGGGCTCTGCG
TNGCGCATGGCATCATGTCCGAGCTCGNCACAACGATACGNACCGNTCCTACTCCNCCTC
GCGCTTAAGACCTGGTNACGCAACGGCTCTCGNGCTACTCGTGCGTGCGTCACATAGCGT
CCAGCCGCGCGTGTCCGTCTGGTCGTTTCTCTCACAGTTCACG

consensusID : consensus_14994#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 337
fasta sequence

                              [CTCCGCCTNTTCAGCGCTTCGACCCACCCCAGCCTTCCCTCGGCAACAAGGGGGTNGAGATCGCCGCCTTCCCCCGCTGATCGCCNCCNCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCNAAAAAAAAAAAAAA]

[+] EMBL AU222776             [CTCCGCCTNTTCAGCGCTTCGACCCACCCCAGCCTTCCCTCGGCAACAAGGGGGTNGAGATCGCCGCCTTCCCCCGCTGATCGCCNCCNCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCNAAAAAAAAAAAAAA]




>consensus_14994#3
CTCCGCCTNTTCAGCGCTTCGACCCACCCCAGCCTTCCCTCGGCAACAAGGGGGTNGAGA
TCGCCGCCTTCCCCCGCTGATCGCCNCCNCCGCCGGAGACGAAGAAGAAGACGACCACCC
AGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGG
TACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTC
CAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCTGTTATATATATA
TGTGATTATCTCTGACCTGATCNAAAAAAAAAAAAAA

consensusID : consensus_14994#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 313
fasta sequence

                              [GGGCGTCCGAGATNGCCGCCTTCCCCCGCTGANCGCCGCCGCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCNGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTNATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAA-TTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCGTCATATACTCATAAAAAAAAAAAAAA]

[+] EMBL AU161085             [GGGCGTCCGAGATNGCCGCCTTCCCCCGCTGANCGCCGCCGCCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCNGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTNATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAA TTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCGTCATATACTCATAAAAAAAAAAA   ]
[+] EMBL AU069272             [                                                                GACCACCCAGACGACCACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGANATTGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCGTCATATACTCATAAAAAAAAAAAAAA]




>consensus_14994#4
GGGCGTCCGAGATNGCCGCCTTCCCCCGCTGANCGCCGCCGCCGCCGGAGACGAAGAAGA
AGACGACCACCCAGACGACCACCACCACCACGACATCCCCNGCTACTAAGCTTGAGCTGC
TGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTNATAATAATAAGTA
CTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAATTTCTTCTTGTGCTCT
GTTATATATATATGTGATTATCTCTGACCTGATCATGATCATCGTCGTCATATACTCATA
AAAAAAAAAAAAA

consensusID : consensus_14994#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 271
fasta sequence

                              [AGAGNACGTNTGGGCTCTCCTCCTCCTCCACATCCANCAGAAAAANTTTNTTTATNAGTNCTTGGAGGAGAGATGTCCAAAATGGCGGAGGAGAAGGNCCTGGCGGCGCCGGCCACCGTCNACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCNTCGGCGGCGGCGGCNCGTTTNGGGCCCGTCAAAACGCTCCTNCANANNGGCCGCTGGGGCTCTACTTCGCCGCATNGCCATNATACTCCAAAACTNGNTCAACAACGANTAC]

[+] EMBL AU069350             [AGAGNACGTNTGGGCTCTCCTCCTCCTCCACATCCANCAGAAAAANTTTNTTTATNAGTNCTTGGAGGAGAGATGTCCAAAATGGCGGAGGAGAAGGNCCTGGCGGCGCCGGCCACCGTCNACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCNTCGGCGGCGGCGGCNCGTTTNGGGCCCGTCAAAACGCTCCTNCANANNGGCCGCTGGGGCTCTACTTCGCCGCATNGCCATNATACTCCAAAACTNGNTCAACAACGANTAC]




>consensus_14994#5
AGAGNACGTNTGGGCTCTCCTCCTCCTCCACATCCANCAGAAAAANTTTNTTTATNAGTN
CTTGGAGGAGAGATGTCCAAAATGGCGGAGGAGAAGGNCCTGGCGGCGCCGGCCACCGTC
NACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCNTCGGCGGCGGCGGCNCGTTTN
GGGCCCGTCAAAACGCTCCTNCANANNGGCCGCTGGGGCTCTACTTCGCCGCATNGCCAT
NATACTCCAAAACTNGNTCAACAACGANTAC

consensusID : consensus_14994#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 227
fasta sequence

                              [ACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU223458             [ACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAATATATAGTGATGAGTGCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14994#6
ACCACCACCACGACATCCCCAGCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTA
CTAGCTAGGCGAGAGCATGATTAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAA
TATATAGTGATGAGTGCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ------------------------------------------------------------
consensus_14994#0      TCCACCTAGCTCTAGAGCCTTCCCTCTCCTCCTCCTCCACATCCACCGGAGAGAGTGTGT 60
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ------------------------------------------------------------
consensus_14994#0      TTATTGGTTCTTGGAGGAGAGATGTCCAAGATGGCGGAGGAGAAGGTGCTGGCGGCGCCG 120
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ------------------------------------------------------------
consensus_14994#0      GCCACCGTCGACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCTTCGTCGGCGGCGGCG 180
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ------------------------------------------------------------
consensus_14994#0      GCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGCGCCGCGCCGCTGGGGCTCTGCGTCGCC 240
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ------------------------------------------------------------
consensus_14994#0      GCCATGGCCATCATGCTCCGCAACTCGGTCACCAACGAGTACGGCACCGTCTCCTACTCC 300
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ------------------------------------------------------------
consensus_14994#0      GACCTCGGCGGCTTCAAGTACCTGGTGTACGCGAACGGGCTCTGCGCCGCCTACTCGCTG 360
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ------------------------------------------------------------
consensus_14994#0      GCGTCGGCGTTCTACATCGCCGTGCCGAGGCCGGCGACGTTGTCCCGCTCCTGGGTCGTT 420
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ------------------------------------------------------------
consensus_14994#0      TTCCTCCTCGACCAGGTGTTCACGTACCTGATCCTGGCAGCGGGGGCGGCGTCGGCGGAG 480
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ----CACATCCACCGGAGAGAGTGTGTTTATTGGTTCTTGGAGGAGAGATGTCCAAGATG 56
consensus_14994#0      CTACTGTACCTGGCGTACAACGGCGACAAGGAGGTGACGTGGAGCGAGGCGTGCGGCGTC 540
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      GCGGAGGAGAAGGTGCTGGCGGCGCCGGCCACCGTCGACGGCGGGATGCAGTCCTCCGGG 116
consensus_14994#0      TTCGGTGGATTCTGCCGGCAGGCGAGGACGTCGGTGGCCATCACCTTCGCCTCCGTTGCC 600
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      -------------------------------CTCCGCCTNTTCAGCGCTTCGACCCACCC 29
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      GACCTGCAGGCTTCGTCGGCGGCGGCGGCGCGTGTGCGGCCCGTCGAGACGCTCCTCCGC 176
consensus_14994#0      TGCTACATCCTCCTCTCCCTCATCTCCTCCTACCGCCTCTTCAGCGCCTACGACCCACCC 660
consensus_14994#2      ------------------------------------------------------------
consensus_14994#5      ---------------------------------------------------------AGA 3
                                                                                   

consensus_14994#3      CAGCCTTCCCTCGGCAACAAGGGGGTNGAGATCGCCGCCTTCCCCCGCTGATCGCCNCCN 89
consensus_14994#4      -------------------GGGCGTCCGAGATNGCCGCCTTCCCCCGCTGANCGCCGCCG 41
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      GCCGCGCCGCTGGGGCTCTGCGTCGCCGCCATGGCCATCATGCTCCGCAACTCG--GTCA 234
consensus_14994#0      CAGCCTTCCCTCGGCAACAAGGGCGTCGAGATCGCCGCCTTCCCCCGCTGATCGCCGCCG 720
consensus_14994#2      -----------------------------------------AGTGTGTTTATTGGTTCTT 19
consensus_14994#5      GNACGTNTGGGCTCTCCTCCTCCTCCACATCCANCAGAAAAANTTTNTTTATNAGTNCTT 63
                                                                                   

consensus_14994#3      CCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCA 149
consensus_14994#4      CCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCN 101
consensus_14994#6      ---------------------------------------ACCACCACCACGACATCCCCA 21
consensus_14994#1      CCAACGAGTACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCA 294
consensus_14994#0      CCGCCGGAGACGAAGAAGAAGACGACCACCCAGACGACCACCACCACCACGACATCCCCA 780
consensus_14994#2      GGAGGAGAGATGTCCAAGATGGCGGAGGAGAAGGTG-CTGGCGGCGC-G-GCCACCGTNG 76
consensus_14994#5      GGAGGAGAGATGTCCAAAATGGCGGAGGAGAAGGNC-CTGGCGGCGCCG-GCCACCGTCN 121
                                                                *  * *   * ** *    

consensus_14994#3      GCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGAT 209
consensus_14994#4      GCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGAT 161
consensus_14994#6      GCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGAT 81
consensus_14994#1      GCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGAT 354
consensus_14994#0      GCTACTAAGCTTGAGCTGCTGCGTGCTTGGGTACTACTACTAGCTAGGCGAGAGCATGAT 840
consensus_14994#2      ACGGCGGGATGCAGTTCTCCGGGGACCTGCAGGCT-TCGTCGGC--GGCGGCGGCGCGTG 133
consensus_14994#5      ACGGCGGGATGCAGTCCTCCGGGGACCTGCAGGCT-TCNTCGGC--GGCGGCGGCNCGTT 178
                        *  *             * * *  * **    **       **  ****   **  *  

consensus_14994#3      TAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAA--TATATAGTGATGAGTGCTT 267
consensus_14994#4      TAAGTNATAATAATAAGTACTTTTATCTCTCCAGCTAAA--TATATAGTGATGAGTGCTT 219
consensus_14994#6      TAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAA--TATATAGTGATGAGTGCTT 139
consensus_14994#1      TAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAA--TATATAGTGATGAGTGCTT 412
consensus_14994#0      TAAGTAATAATAATAAGTACTTTTATCTCTCCAGCTAAA--TATATAGTGATGAGTGCTT 898
consensus_14994#2      TGCGGCCCGTNGAGACGCTCCTCCGCGCCGGCCGCTGGGGCTCTGCGTNGC-GCATGGC- 191
consensus_14994#5      TNGGGCCCGTCAAAACGCTCCTNCANANNGGCCGCTGGGGCTCTACTTCGCCGCATNGCC 238
                       *  *        * * *  * *         * ***     * *     *  *  *    

consensus_14994#3      TTTAAT-TTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCN--- 323
consensus_14994#4      TTTAAT-TTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGA 278
consensus_14994#6      TTTAAA-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 198
consensus_14994#1      TTTAAT-TTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGA 471
consensus_14994#0      TTTAAT-TTCTTCTTGTGCTCTGTTATATATATATGTGATTATCTCTGACCTGATCATGA 957
consensus_14994#2      ATCATG-TCCGAGCTCGNCACAACGATACGNACCGNTCCTACTCCNCCTCGCGCTTAAGA 250
consensus_14994#5      ATNATACTCCAAAACTNGNTCAACAACGANTAC--------------------------- 271
                        * *                     *     *                            

consensus_14994#3      ---------------------AAAAAAAAAAAAAA------------------------- 337
consensus_14994#4      TCATCGTCGTCATATACTCATAAAAAAAAAAAAAA------------------------- 313
consensus_14994#6      AAAAA------AAAAAAAAAAAAAAAAAAAAAAAA------------------------- 227
consensus_14994#1      TCATCGTCGTCATATACTCATATATCTCTACTCG-------------------------- 505
consensus_14994#0      TCATCGTCGTCATATACTCATATATCTCTACTCGAACTCGTGGTATGTATGGTTGTTGAT 1017
consensus_14994#2      CCTGGTNACGCAACGGCTCTCGNGCTACTCGTGCGTGCGTCACATAGCGTCCAGCCGCGC 310
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------------
consensus_14994#4      ------------------------------------------------------------
consensus_14994#6      ------------------------------------------------------------
consensus_14994#1      ------------------------------------------------------------
consensus_14994#0      TCGATCAGCTGTGGTGAACTGATTGACCCGTTACAAAGGGTGCAAACTGGATATGTATCT 1077
consensus_14994#2      GTGTCCGTCTGGTCGTTTCTCTCACAGTTCACG--------------------------- 343
consensus_14994#5      ------------------------------------------------------------
                                                                                   

consensus_14994#3      ------------------------------------------------------
consensus_14994#4      ------------------------------------------------------
consensus_14994#6      ------------------------------------------------------
consensus_14994#1      ------------------------------------------------------
consensus_14994#0      CGGTTAGAGAATGGGTGGTCTAATTTGAGATCTTGAATGGGTGTTGCTTAAAAA 1131
consensus_14994#2      ------------------------------------------------------
consensus_14994#5      ------------------------------------------------------