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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15035#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 2848 fasta sequence
[GTCCTCGTCGTCTTCCTCCCATTTTTTTTTCCTCCTCCTCCTCCTCTCATCCCTCGCCGCGAGCCAAAGCCCCTGGTTTCCTCGCAACTGCCTCCCCGCGATTCCGTTTGACCCCCACTGTTCTTCTCCCCTACCACCACCAGGTCGCAGTCGCTTCCAATTTCCAAATAATTCCCTCCACTCCGGCCGCTCGCGAGGAAAGAAAAGGATTTCTTTTTCTCTCTCTCTCTCTCTCCCTCTCTCCGAGATCCGTTTCCCAAACAGGCGGGGGGTCGAAAGTGTTTGGTACTTTGGTTTGGGGAGGCTTGTTTGCCGACGCGGATCTGCGTGGAGACGAGCAGAGGGGGGAGCGCCGGAATTGGGTGGTTTGGCCCGGGAGGCGCCGGAAAGTGGGGGAGCCTTTGGATTCCCCGAACCCGCCATGGTGATCCGGCACGAGTAGTAGTGGTGGTGGTGGTATTAGTAGCAGTGAGATGCCGGCGCGTAGCGCGGTGGTGGTAATAGCCATGGAGCCCTCGTCGTCCATCACCATCGCGTCGTCGTCCTCGTACCTCTCGAACGGGTCTAGCCCGTGCTCGGTCTCTCTTGCGCCGCCGGGGGCAGGGGCGGTGGCGGCGCAGGCGGCGCCGGTTGCCGCCGGGGAGGGCGGCGGCGGCGGAGGAGGAGG-AGGAGGAGGAGGGAGTAGTAGCGTGGAGGTGGTGAGCCTGAATCGGCTTAGCGCTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACGTGGCCGACGGTGGCCCGCCC-GTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT-GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG-TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT-TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTGTTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACACGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACAAAGGAGCAGCTGTATCACAATTGACTGCTGATGGCCAGAGTGCAATGAGTATCTGCCGGAGGTTAACAAGGATGAAAGACTACAATACAAAGATGGAGCAAGGCCAAGAGTCAAACAAAGACAGATTATGTATTGATATATTAGATAGGGAGATGATAAGGAAACCTATGGCAGTGGAAGATTCTGTCACCTCGCCTTTGTTGGCTGACGATCTTCACATGAAGCTTCTCTACCTTGAAAACAGAGTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG-TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG-CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT-TCTGTTTTGTTCAGGATGGCTGTAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTCTCGTAAGCATACTGCCATTATTGAGATTGTAGAAGCTGCAAGTTTTGTAAGAAAA-AGACGGCGTTGCTTATCGCCAACGCTATGTATCGGAGAACAAGT-TTTTTTTTGGCTGTGAGACACA-GGAAATGGATATGCAAAAAAGAAAAATCTTGTGTAAATAAAAGG]
[+] EMBL AK067198 [GTCCTCGTCGTCTTCCTCCCATTTTTTTTTCCTCCTCCTCCTCCTCTCATCCCTCGCCGCGAGCCAAAGCCCCTGGTTTCCTCGCAACTGCCTCCCCGCGATTCCGTTTGACCCCCACTGTTCTTCTCCCCTACCACCACCAGGTCGCAGTCGCTTCCAATTTCCAAATAATTCCCTCCACTCCGGCCGCTCGCGAGGAAAGAAAAGGATTTCTTTTTCTCTCTCTCTCTCTCTCCCTCTCTCCGAGATCCGTTTCCCAAACAGGCGGGGGGTCGAAAGTGTTTGGTACTTTGGTTTGGGGAGGCTTGTTTGCCGACGCGGATCTGCGTGGAGACGAGCAGAGGGGGGAGCGCCGGAATTGGGTGGTTTGGCCCGGGAGGCGCCGGAAAGTGGGGGAGCCTTTGGATTCCCCGAACCCGCCATGGTGATCCGGCACGAGTAGTAGTGGTGGTGGTGGTATTAGTAGCAGTGAGATGCCGGCGCGTAGCGCGGTGGTGGTAATAGCCATGGAGCCCTCGTCGTCCATCACCATCGCGTCGTCGTCCTCGTACCTCTCGAACGGGTCTAGCCCGTGCTCGGTCTCTCTTGCGCCGCCGGGGGCAGGGGCGGTGGCGGCGCAGGCGGCGCCGGTTGCCGCCGGGGAGGGCGGCGGCGGCGGAGGAGGAGG AGGAGGAGGAGGGAGTAGTAGCGTGGAGGTGGTGAGCCTGAATCGGCTTAGCGCTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACGTGGCCGACGGTGGCCCGCCC GTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTGTTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACACGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACAAAGGAGCAGCTGTATCACAATTGACTGCTGATGGCCAGAGTGCAATGAGTATCTGCCGGAGGTTAACAAGGATGAAAGACTACAATACAAAGATGGAGCAAGGCCAAGAGTCAAACAAAGACAGATTATGTATTGATATATTAGATAGGGAGATGATAAGGAAACCTATGGCAGTGGAAGATTCTGTCACCTCGCCTTTGTTGGCTGACGATCTTCACATGAAGCTTCTCTACCTTGAAAACAGAGTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCATCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGCAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTATAATGATAAAATCTTTT ]
[+] EMBL CB639247 [ TCTCCCCCTCTCTCCGAGATCCGTTTCCCAAACAGGCGGGGGGTCGAAAGTGTTTGGTACTTTGGTTTGGGGA GCTTGTTTGCCGACGCGGATCTGCGTGGAGACGAGCAGAGGGGGGAGCGCCGGAATTGGGTGGTTTGGCCCGGGAGGCGCCGGAAAGTGGGGGAGCCTTTGGATTCCCCGAACCCGCCATGGTGATCCGGCACGAGTAGTAGTGGTGGTGGTGGTATTAGTAGCAGTGAGATGCCGGCGCGTAGCGCGGTGGTGGTAATAGCCATGGAGCCCTCGTCGTCCATCACCATCGCGTCGTCGTCCTCGTACCTCTCGAACGGGTCTAGCCCGTGCTCGGTCTCTCTTGCGCCGCCGGGGGCAGGGGCGGTGGCGGCGCAAGCGGCGCCGGTTGCCGCCGGGGAGGGCGGCGGCGGCGGAGG ]
[+] EMBL CB635292 [ GGAGGCACGAGGAGGAGGGAGTAGTAGCGTGGAGGTGGTGAGCCTGAATCGGCTTAGCGCTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACGTGGCCGACGGTGGCCCGCCC GTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGCACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGAGCGACGCCTTCCTGTCTCTGCTGGGTTACCTGTACTCGGGCAGGCTCCGGCCGGAGCCGGATGACGCGGTGTCCTGCGCCAACCCCATGTGCCCGCACGACTCGTGCCCTCCGGCGATCACGTTCAACGGCGAGCAAATGGACGCag ]
[+] EMBL CB635872 [ GAGGTGGTGAGCCTGAATCGGCTTAGCGCTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACGTGGCCGACGGTGGCCCGCCC GTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGACGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCTAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAACACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAA ]
[+] EMBL CB652223 [ CGCCCAGTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCTTCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCTAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGGAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGCTGGATAAGGAACTTCCTCCAGAAGTTGCTGATCAGATAAAAGAGATTCGCCAAAAATCTCAACCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGA ]
[-] EMBL BI809237 [ GGGGCTGCCGGCGGCGGCGGCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGACGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGG TTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTG TTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTG AAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAA TTCCTCCAGAAGTTG TGTTCAGATAAAAGAGA TCG CAAAAATCTCAG CAAATGAGGGTGACATTGTTCATTTCAGA CCTGTACTTGAG AAAGGGTC GAAGA ]
[+] EMBL CB662984 [ AGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTGTTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACACGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACAAAGGAGCAGCTGTATCANCATTGACT ]
[+] EMBL CB662786 [ AGGACTGGGGGGAGGCCGCGGTACAAGATGGAGGAGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTGTTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACACGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACAAAGGAGCAGCTGTATCACAATT ]
[+] EMBL CF325841 [ GCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGG ]
[+] EMBL CF324017 [ ATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAATGGTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCTNTGGATGATGCCAATGCATTGCACTATGCT ]
[+] EMBL CF323144 [ ATGCCTTCCTGTCGCTGCTGGGTTACCTGTACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCCCGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGGCGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCCAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAAT GTATCGTTGGATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGCCAAATGAGGGTGACACCG TCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCCACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGATCACCT TGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGAT ]
[+] EMBL CA764274 [ aaggggTAGATAGGGAGATGATAAGGAAACCTATGGCAGTGGAAGATTCTGTCACCTCGCCTTTGTTGGCTGACGATCTTCACATGAAGCTTCTCTACCTTGAAAACAGAGTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCGGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTCAGTAACAAATTTCCGCTCGTGATGNTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTANAAAGTGCTGNTCTGGGCTGCACTCAGCTGGNTTATGGGANCCATGCCGGGGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTNCNAAGTAGNGNCTCTCGNAAANATGGTTGTAGCAT TCTGNTTTGTT AAGATGGCTGGAATGA NAAANCTTTT AANANA ATATAGC ]
[-] EMBL CB635873 [ GTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTGTAATGATAAAAGCTTTTCAATAGATATATAGCTAATTGTCTCGTAAaaaaaaga ]
[-] EMBL CB662985 [ GCATTTGCAAGATTATTTTCTCTTGCAGAAGCAAAGGTTGCAATGCAAATTGCACAAGCAGACACCTCTCCAGAATTTGGCATTGTTCTTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGTTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTTTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCCACCTCCAAAATGGCACTTTTGATGAGCAAAATGTTAAAAGGATGCGGTTTTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTTTATCTTGTCATCTTCATCGTCATCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAAC AATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTCCAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTCCTGTTTTGGGCTGCACTCAGCTGGTTTATGGGACCCACG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGCAGTGTCTCTCGTGAATATGTTCGTAGCGTGTCTGTTT ]
[-] EMBL CB633531 [ AATGCAAATTGCACAAGCAGACACCACACCAGAATTTGGCA TGTTCCTGCAGCTAGCACTTCTGGAAAATTGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGGTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTGTAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTCTCGTAAGCATACTGCCATTATTGAGATTGTAGAAGCTGCAAGTTTTGTAAGAAAAGGGACGGCGTTGCTTATCGCCAACGCTATGTATCGGAGAACAAGTGTTTTTTTTGGCTGTGAGACCTT TGAAGTGGATATGCAAAAAA ]
[-] EMBL CB635293 [ GTGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGGTGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAAATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAG TTAAAGGAGGATGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTGTAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTCTCGTAAGCATACTGCCATTATTGAGATTGTAGAAGCTGCAAGTTTTGTAAGAAAA AGACGGCGTTGCTTATCGCCAACGCTATGTATCGGAGAACAAGTGTTTTTTTTGGCTGTGAGACACAGGGAGATGGATATGCAAAAAAGAAAAATCTTGTGTAAATAAAAGG]
[+] EMBL BI810390 [ CCGGA GCACTCGACCTCC AAATGGCACTTCTGATGA CCAAATGTTAAAAGAAT C GTTCTGTGAGTTTAAAGGAGGATGTGCGCAA GCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTTCATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAAC AATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATC ATAGACCTGTATAGTCTTACAGTGGTATAAC ATTAGATATCGAAGCTTCTTCGAATATTAGCAAGTGCTGTTCTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGC AAAGAAAACCAGCTGATTAGAGGCTCC AAGTAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTGTAATGATAACATCTTTTCAATAGATAaaaaaaaa ]
[-] EMBL CB639248 [ TGTGCGCAAGGCATTCAGCAAAGACAGAGCTGATAANAGCATGTTTTCTATCTTGTCATCTTCATCGTCATCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAATTTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACAGTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTTTGGGCTGCACTCAGCTGGTTTATGGGACCCATG CGGTGAAACTGGCAAAAGAAAACCAGCTGATTAGAGGCTCCAAAGCAGTGTCTCTCGTGAATATGTTTGTAGCAT TCTGTTTTGTTCAGGATGGCTATAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTTTCGTAAGCATACTGCCATTATTGAGATCGTAGAAGCTGCAAGTTTTGTAAGAAAA AGACGGCGTTGCTTATCGCCAACGCTATGTATCGGAGAACAAGT TTTTTTTTGGTTGTGAGACACA GGTAATGGATAT ]
consensusID : consensus_15035#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 199 fasta sequence
[TCAAGATCATTGAGCTCATCTCGCTGTTCCACGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCAGTGCTTGAAAATGTATTCGGAGATTGCAAGATCAAATCTTGATATGTATCGTGATAGACTCTCAGAGTGCTGTCAGATAAGG]
[+] EMBL D42201 [TCAAGATCATTGAGCTCATCTCGCTGTTCCACGACGGCTTCTTAACTTCGTCGATAAGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTCAGTGCTTGAAAATGTATTCGGAGATTGCAAGATCAAATCTTGATATGTATCGTGATAGACTCTCAGAGTGCTGTCAGATAAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15035#0 GTCCTCGTCGTCTTCCTCCCATTTTTTTTTCCTCCTCCTCCTCCTCTCATCCCTCGCCGC 60
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 GAGCCAAAGCCCCTGGTTTCCTCGCAACTGCCTCCCCGCGATTCCGTTTGACCCCCACTG 120
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TTCTTCTCCCCTACCACCACCAGGTCGCAGTCGCTTCCAATTTCCAAATAATTCCCTCCA 180
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CTCCGGCCGCTCGCGAGGAAAGAAAAGGATTTCTTTTTCTCTCTCTCTCTCTCTCCCTCT 240
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CTCCGAGATCCGTTTCCCAAACAGGCGGGGGGTCGAAAGTGTTTGGTACTTTGGTTTGGG 300
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 GAGGCTTGTTTGCCGACGCGGATCTGCGTGGAGACGAGCAGAGGGGGGAGCGCCGGAATT 360
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 GGGTGGTTTGGCCCGGGAGGCGCCGGAAAGTGGGGGAGCCTTTGGATTCCCCGAACCCGC 420
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CATGGTGATCCGGCACGAGTAGTAGTGGTGGTGGTGGTATTAGTAGCAGTGAGATGCCGG 480
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CGCGTAGCGCGGTGGTGGTAATAGCCATGGAGCCCTCGTCGTCCATCACCATCGCGTCGT 540
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CGTCCTCGTACCTCTCGAACGGGTCTAGCCCGTGCTCGGTCTCTCTTGCGCCGCCGGGGG 600
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CAGGGGCGGTGGCGGCGCAGGCGGCGCCGGTTGCCGCCGGGGAGGGCGGCGGCGGCGGAG 660
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 GAGGAGGAGGAGGAGGAGGGAGTAGTAGCGTGGAGGTGGTGAGCCTGAATCGGCTTAGCG 720
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CTAACCTCGAGCGGCTCCTCCTCGATTCCGACCTCGACTGCAGCGACGCCGACGTCGACG 780
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TGGCCGACGGTGGCCCGCCCGTGCCAGTCCACCGCTGCATCCTCGCCGCCCGCAGCACCT 840
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TCTTCTACAACCTCTTCGCGGCGCGCGGCCGCGGCGGCGATGGGGCTGCCGGCGGCGGCG 900
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 GCGGCGGCGGTGGTGGGGGAGGGGAGAGGACTGGGGGGAGGCCGCGGTACAAGATGGAGG 960
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 AGCTCGTGCCGGGAGGCCGCGTGGGGCGCGATGCCTTCCTGTCGCTGCTGGGTTACCTGT 1020
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 ACACGGGCAAGCTCCGGCCGGCGCCGGATGACGTGGTGTCCTGCGCCGACCCCATGTGCC 1080
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CGCACGACTCGTGCCCGCCGGCGATCAGGTTCAACGTCGAGCAAATGTACGCGGCGTGGG 1140
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CGTTCAAGATCACCGAGCTCATCTCGCTGTTCCAGCGACGGCTTCTTAACTTCGTCGATA 1200
consensus_15035#1 ---TCAAGATCATTGAGCTCATCTCGCTGTTCCA-CGACGGCTTCTTAACTTCGTCGATA 56
********* ******************** *************************
consensus_15035#0 AGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTC 1260
consensus_15035#1 AGACTCTAGTAGAAGATGTTCTTCCAATTCTGCAAGTTGCTTTTCATTCAGAGCTGACTC 116
************************************************************
consensus_15035#0 CAGTGCTTGAAAAATGTATTCGGAGAATTGCAAGATCAAATCTTGATAATGTATCGTTGG 1320
consensus_15035#1 -AGTGCTTGAAAA-TGTATTCGGAGA-TTGCAAGATCAAATCTTGATA-TGTATCGT--G 170
************ ************ ********************* ******** *
consensus_15035#0 ATAAGGAACTTCCTCCAGAAGTTGCTGTTCAGATAAAAGAGATTCGCCAAAAATCTCAGC 1380
consensus_15035#1 ATAGA------CTCTCAGAG--TGCTGT-CAGATAAGG---------------------- 199
*** * **** ****** *******
consensus_15035#0 CAAATGAGGGTGACACCGTCATTTCAGACCCTGTACATGAGAAAAGGGTCAGAAGAATCC 1440
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 ACAGGGCACTGGATTCTGATGATGTTGAGCTTGTGAAGTTGCTTCTTAACGAATCTGAGA 1500
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TCACCTTGGATGATGCCAATGCATTGCACTATGCTGCTGCTTACTGTGATTCGAAAGTTG 1560
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TTTCGGAGTTGTTAGACTTGAGACTTGCCAACTTGAATTTGAAGAATTCGCGTGGATACA 1620
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CGGCACTCCATCTGGCTGCTATGAGGAGAGAGCCAGCTATTATCATGTGTCTCCTAAACA 1680
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 AAGGAGCAGCTGTATCACAATTGACTGCTGATGGCCAGAGTGCAATGAGTATCTGCCGGA 1740
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 GGTTAACAAGGATGAAAGACTACAATACAAAGATGGAGCAAGGCCAAGAGTCAAACAAAG 1800
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 ACAGATTATGTATTGATATATTAGATAGGGAGATGATAAGGAAACCTATGGCAGTGGAAG 1860
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 ATTCTGTCACCTCGCCTTTGTTGGCTGACGATCTTCACATGAAGCTTCTCTACCTTGAAA 1920
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 ACAGAGTTGCATTTGCAAGATTATTTTTTCCTGCAGAAGCAAAGGTTGCAATGCAAATTG 1980
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CACAAGCAGACACCACACCAGAATTTGGCATTGTTCCTGCAGCTAGCACTTCTGGAAAAT 2040
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TGAAGGAAGTCGATCTGAACGAGACACCAGTAACACAAAACAAAAGGCTCCGTTCAAGGG 2100
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TGGATGCACTCATGAAAACAGTTGAGCTGGGACGTCGCTACTTCCCTAACTGCTCGCAGG 2160
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TGCTCGACAAATTTCTGGAGGATGATTTGCCCGATAGTCCTGATGCACTCGACCTCCAAA 2220
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 ATGGCACTTCTGATGAGCAAAATGTTAAAAGGATGCGGTTCTGTGAGTTAAAGGAGGATG 2280
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TGCGCAAGGCATTCAGCAAAGACAGAGCTGATAATAGCATGTTTTCTATCTTGTCATCTT 2340
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CATCGTCCTCTTCGCCACCTCCCAAGGTTGCAAAGAAATGACAGAAGTTTTGTAACAAAT 2400
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TTCCGCTCGTGATGTTACTGGGACAAGAGATATCGATCAATAGACCTGTATAGTCTTACA 2460
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 GTGGTATAACAATTAGATATCGAAGCTTCTTCGAATATTAGAAAGTGCTGTTCTGGGCTG 2520
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CACTCAGCTGGTTTATGGGACCCATGCGGTGAAACTGGCAAAAGAAAACCAGCTGATTAG 2580
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 AGGCTCCAAAGTAGTGTCTCTCGTGAATATGTTTGTAGCATTCTGTTTTGTTCAGGATGG 2640
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CTGTAATGATAAAATCTTTTCAATAGATATATAGCTAATTGTCTCGTAAGCATACTGCCA 2700
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 TTATTGAGATTGTAGAAGCTGCAAGTTTTGTAAGAAAAAGACGGCGTTGCTTATCGCCAA 2760
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 CGCTATGTATCGGAGAACAAGTTTTTTTTTGGCTGTGAGACACAGGAAATGGATATGCAA 2820
consensus_15035#1 ------------------------------------------------------------
consensus_15035#0 AAAAGAAAAATCTTGTGTAAATAAAAGG 2848
consensus_15035#1 ----------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||