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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15075#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1555 fasta sequence
[TCACCCCCAAGCTCGGCGCAACCTCTCTCGACGTGCTAATGGCGGCGGCGGCGGCGGACTTCGCGGCGAGCAAGCGGGCCATGGCCTACGCGCTCTGCAAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTGTGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAAAATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAGTTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATACAAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCGATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT-TCAGGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAGAGAATAAAGCTCCTGAGAATAAGGCAAATCCTACTCCAGCAAAAAATAAC-AAACCTTCTGGGGATAAAAAGAAAGCCCAGGAGAAATCTGCAGGAAAACCAAATGAGGGAGTTGCGGATAAAGCTCCACAGAAAACTGCAGAAAAGGACTCAGAATGCAATGTCAGTATCCTGAATATACAGGTTGGCCTTATTCGCAAAGCATGGAAGCACCCATCTGCTGACAGCCTCTTGGTTGAGGAGATAGATTTGGGAGATGGCAATGTGCATCAAGTTGTTAGTGGGCTTGCCAAGTTC-TTCAG-CCCAGAGGAACTTG-TTAATCGGCATGTTGTATTAATCACGAATGTGAAGCCTGGGAAGCTGCGAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTCAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCAGAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGAAATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCATTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACA-CATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCGTCCATCTA-CTGTGATATCTAATAGAAAATTTTGACTAGCCAATGTGAAGAACATTTGTATTACCTTGCACCAAATGCAAAATCCTTCATGAACCCGGTTGTTTTCAGGCAGGATTTTTGATGAATCAATTTCTCTTTACCCTTTAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK119168 [TCACCCCCAAGCTCGGCGCAACCTCTCTCGACGTGCTAATGGCGGCGGCGGCGGCGGACTTCGCGGCGAGCAAGCGGGCCATGGCCTACGCGCTCTGCAAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTGTGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAAAATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAGTTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATACAAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCGATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT TCAGGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAGAGAATAAAGCTCCTGAGAATAAGGCAAATCCTACTCCAGCAAAAAATAAC AAACCTTCTGGGGATAAAAAGAAAGCCCAGGAGAAATCTGCAGGAAAACCAAATGAGGGAGTTGCGGATAAAGCTCCACAGAAAACTGCAGAAAAGGACTCAGAATGCAATGTCAGTATCCTGAATATACAGGTTGGCCTTATTCGCAAAGCATGGAAGCACCCATCTGCTGACAGCCTCTTGGTTGAGGAGATAGATTTGGGAGATGGCAATGTGCATCAAGTTGTTAGTGGGCTTGCCAAGTTC TTCAG CCCAGAGGAACTTG TTAATCGGCATGTTGTATTAATCACGAATGTGAAGCCTGGGAAGCTGCGAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTCAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCAGAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGAAATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCATTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACA CATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCGTCCATCTA CTGTGATATCTAATAGAAAATTTTGACTAGCCAATGTGAAGAACATTTGTATTACCTTGCACCAAATGCAAAATCCTTCATGAACACGGTTGTT ]
[+] EMBL AK073951 [ CCCCAAGCTCGGCGCAACCTCTCTCGACGTGCTAATGGCGGCGGCGGCGGCGGACTTCGCGGCGAGCAAGCGGGCCATGGCCTACGCGCTCTGCAAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTGTGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAAAATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAGTTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATACAAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCGATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT TCAGGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAGAGAAT ]
[+] EMBL CB679917 [ AAGCTCGGCGCAACCTCTCTCGACGTGCTAATGGCGGCGGCGGCGGCGGACTTCGCGGCGAGCAAGCGGGCCATGGCCTACGCGCTCTGCAAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTGTGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAAAATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAGTTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATACAAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCGATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT TCAGGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAGAGAATAAAGCTCCTGAGAATAAGGCAAATCCTACTCCAGCAAAAAATAAC AAACCTTCTGGGGATAAAAAGAGAGCCCAGGAGAAATCTGCAGGAAAACCAAATGAGGGAGTTGCGGATAAAGCTCCACAGAAAACTGCAGAAAAGGACTCAGAATGCAATGTCAGTATCCTGAATATACAAGTTGGCCTTATTCGCAAAGCATGGAAGCAC ]
[+] EMBL CB647114 [ AAGCTCGGCGCAACCTCTCTCGACGTGCTAATGGCGGCGGCGGCGGCGGACTTCGCGGCGAGCAAGCGGGCCATGGCCTACGCGCTCTGCAAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTGTGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAAAATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAGTTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATACAAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCGATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT TCAGGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAGAGAATAAAGCTCCTGAGAATAAGGCAAATCCTACTCCAGCAAAAAATAAC AAACCTTCTGGGGATAAAAAGACAGCCCAGGAGAAATCTGCAGGAAAACCAAATGAGGGAGTTGCGGATAAAGCTCCA ]
[+] EMBL CB647070 [ AAGCTCCTTGCAACCTCTCTCGACTTGCTAATGGCGGCGGCGGCGGCGGACTTCGCGGCGAGCAAGCGGGCCATGGCCTACGCGCTCTGCAAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTGTGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAAAATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAGTTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATACAAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCGATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT TCAGGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAGAGAATAAAGCTCCTGAGAATAAGGCAAATCCTACTCCAGCAAAAAATAAC AAACCTTCTGGGGATAAAAAGAAAGCCCAGGAGAAATCTGCAGGAAAACCAAATGAGGGAGTTG ]
[+] EMBL CB669098 [ GCGCAACCCCTCTCGACGTGCTAATGGCGGCGGCGGCGGCGGACTTCTCGGCGAGCAAACGGGCCATGGCCTACGCGCTCTGCGAGCACCTCAGCCTCGATCCGAATACAATATCCAGAACAAGTATTGAATAGAGTGATATTGCCACCCTGTACTCACATATTGGGAAATCGAGTGAAGATGAGGGACTGAAATGGGATGAATTTTCCAGCAATTTTGTTGGAAAATGAGGAGAACAGCATGCATTGCTTGGTAATCTGAATCGAGACTTGACCCATAAATCCGTTCTGTTGGGTACTGGTTTTAAACCATCAGCTGCTGATATTGTTGTGTTTGCAACCATACAAGGTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCTCCTGCATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACGAAAGGTTAACTTGACCAAATCTGTCTTCAATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT TCACGACAGAAGAATGTGGGCTAATCGGATGCAAATGTTGATTCCAA ]
[+] EMBL CB669137 [ cctCAACCTCTCTCGACGTGCTAATGGCGGCGGCGGCGGCGGACTTCGCGGAGAGCAAACGGGCCATGGCCTACGCGCTCTGCGAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGGGATATTGCCACCCTGTTCTCACATATTGGGAAATCGAATGAAGATGAGGGACTGAAATGGGTTGAATTTTCCACCAATTTTGTTGGAAAATGAGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGACCCATAAATCATTTCTGTTGGGTAATGGTTTTAAACCATCAGCTGCTGATATTGCTGCGTTTGCAACCATACAAGGTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCACAAATATCCACATGTATTGCGGAGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCAATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTTATCGTGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAAAGAATAAAGCTCCTGAGAATAACGCAA ]
[+] EMBL AK103171 [ CTCTCTCGACGTGCTAATGGCGGCGGCGGCGGCGGACTTCGCGGCGAGCAAGCGGGCCATGGCCTACGCGCTCTGCAAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTGTGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAAAATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAGTTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATACAAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCGATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT TCAGGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAGAGAATAAAGCTCCTGAGAATAAGGCAAATCCTACTCCAGCAAAAAATAAC AAACCTTCTGGGGATAAAAAGAAAGCCCAGGAGAAATCTGCAGGAAAACCAAATGAGGGAGTTGCGGATAAAGCTCCACAGAAAACTGCAGAAAAGGACTCAGAATGCAATGTCAGTATCCTGAATATACAGGTTGGCCTTATTCGCAAAGCATGGAAGCACCCATCTGCTGACAGCCTCTTGGTTGAGGAGATAGATTTGGGAGATGGCAATGTGCATCAAGTTGTTAGTGGGCTTGCCAAGTTC TTCAG CCCAGAGGAACTTG TTAATCGGCATGTTGTATTAATCACGAATGTGAAGCCTGGGAAGCTGCGAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTCAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCAGAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGAAATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCATTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACA CATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCGTCCATCTA CTGTGATATCTAATAGAAAATTTTGACTAGCCAATGTGAAGAACATTTGTATTACCTTGCACCAAATGCAAAATCCTTCATGAACACGGTTGTTTTCAGGCAGGATTT ]
[+] EMBL CB669096 [ GCGAGCAAGCGGGCCATGGCCTACGCGCTCTGCCAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTGTGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAAAATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAGTTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATACAAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCGATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT TCATGACAGAAGAATGTGGGCCAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAGAAAATAAAGCTCCTGAAAATAAGGCAAATCCTACTCCAGCAAAAAATAACAAAACCCTCTG ]
[+] EMBL CA756351 [ GCGGGCCATGGCCTACGCGCTCTGCAAGCACCTCAGCCTCGATCCGAATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTGTGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAAAATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAGTTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATACAAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGTGGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGACCAAATCTGTCTTCGATCCACCTTCTCATCNCAAGAAGGCAGATAAAGGTGACACTGATCCAAGTTCAAAGAAAGTTGTT TCAGGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTGATTCCAAGAAAGCTGCACCAGAGAATAAAGCTCCTGAGAATAAGGNCAATCCTACTCCAGC AAAAATAAC AAACC ]
[-] EMBL CB647071 [ AAC AAACCTTCTGGGGATAAAAAGAAAGCCCAGGAGAAATCTGCAGGAAAACCAAATGAGGGAGTTGCGGATAAAGCTCCACAGAAAACTGCAGAAAAGGACTCAGAATGCAATGTCAGTATCCTGAATATACAGGTTGGCCTTATTCGCAAAGCATGGAAGCACCCATCTGCTGACAGCCTCTTGGTTGAGGAGATAGATTTGGGAGATGGCAATGTGCATCAAGTTGTTAGTGGGCTTGCCAAGTTC TTCAG CCCAGAGGAACTTG TTAATCGGCATGTTGTATTAATCACGAATGTGAAGCCTGGGAAGCTGCGAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTCAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCAGAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGAAATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCATTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACA CATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCGTCCATCTA CTGTGATATCTAATAGAAAATTTTGACTAGCCAATGTGAAGAACATTTGTATTACCTTGCACCAAATGCAAAATCCTTCATGA ]
[-] EMBL CB669097 [ TTGCGGATAAAGCTCCACAGAAAACTGCAGAAAAGGACTCAGAATGCAATGTCAGTATCCTGAATATACAGGTTGGCCTTATTCGCAAAGCATGGAAGCACCCATCTGCTGACAGCCTCTTGGTTGAGGAGATAGATTTGGGAGATGGCAATGTGCATCAAGTTGTTAGTGGGCTTGCCAAGTTC TTCAG CCCAGAGGAACTTG TTAATCGGCATGTTGTATTAATCACGAATGTGAAGCCTGGGAAGCTGCGAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTCAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCAGAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGAAATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCATTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACA CATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCGTCCAT TAGGTGTGATATCTAATA ]
[+] EMBL BM422044 [ GTTCTTTCAGCCCCAGAGGAACTTGTTTAATCGGCATGTTGTATTAATCACGAATGTGAAGCCTGGGAAGCTGCGAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTCAAATCAAGATCATACAGTTGTAGAGCCCTTGATTCCTCCAGAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGAAATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCATTAAGTGAGCAGTTATTTTAACAGATTCCCAACATTGTTGTGCTATAACACCATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCGTCCATCTA CTGTGATATCTAATAGAAAATTTTGACTAGCC ATGTGAAGAACATTTGTATTA CTTGCNCC AATGC AAATCCTTCANGAACCCGGTTGTTTTCA GCAGGAaaaaaa ]
[-] EMBL CA763221 [ AATGCGAGCATTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACC CCTGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTTAGCGTAGCGTCCATCTA CTGTGATATTTAATAGAAAATTTTGGCTAGCCAATGTGAAGAACATTTGTATTACCTTGCCCCAAATGCAAAATCCTTCATGAACCCGGTTGTTTTCAGGCAGGATTTTTGATGAATCAATTTCTCTTTACCCTTTAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA763222 [ AATGCGAGCATTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACC CCTGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTTAGCGTAGCGTCCATCTA CTGTGATATTTAATAGAAAATTTTGGCTAGCCAATGTGAAGAACATTTGTATTACCTTGCCCCAAATGCAAAATCCTTCATGAACCCGGTTGTTTTCAGGCAGGATTTTTGATGAATCAATTTCTCTTTACCCTTTAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15075#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 706 fasta sequence
[GCAATGTCAGTATCCTGAATATACAGGTTGGCCTTATTCGCAAAGCATGGAAGCACCCATCTGCTGACAGCCTCTTGGTTGAGGAGATAGATTTGGGAGATGGCAATGTGCATCAAGTTGTTAGTGGGCTTGCCAAGTTCTTCAGCCCAGAGGAACTTGTTAATCGGCATGTTGTATTAATCACGAATGTGAAGCCTGGGAAGCTGC-GAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTCAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCA-GAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGA-AATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCA-TTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACACATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCGTCCATCTACTGTGATATCTAATAGAAAATTTTGACTAGCCAATGTGAAGAACATTTGTATTACCTTGCACC-AATGCAAAATCCTTCATGAAAAAAAAAAAGGG]
[-] EMBL CB647115 [GCAATGTCAGTATCCTGAATATACAGGTTGGCCTTATTCGCAAAGCATGGAAGCACCCATCTGCTGACAGCCTCTTGGTTGAGGAGATAGATTTGGGAGATGGCAATGTGCATCAAGTTGTTAGTGGGCTTGCCAAGTTCTTCAGCCCAGAGGAACTTGTTAATCGGCATGTTGTATTAATCACGAATGTGAAGCCTGGGAAGCTGC GAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTCAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCA GAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGA AATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCA TTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACACATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCGTCCATCTACTGTGATATCTAATAGAAAATTTTGACTAGCCAATGTGAAGAACATTTGTATTACCTTGCACCAAATGCAAAATCCTTCATGAACAAAAAAAAGGG]
[+] EMBL BI805273 [ GAGGAGATAGATTT GGAGAT GCATGGTGCATCAAGTTGTTAGTGGGCTTGCCAAGTTCTTCAGCCCAGAGGAACTTGTTAATCGGCATGTTGTATTAATCACGAATGTGAAGCCTGGGAAGCTGC GAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTC AATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCA GAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGACCATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCA TTAAGTGAGCAGTTATTTTAACAGATTCC AACATTGTTGTGCTATAACACATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATC ACTGTTGTCAGCGTAGCGTCCATCTACTGTGATATCTAATAGAAAATTTTGACTAGCC ATGTGAAGAACATTTGTATTACCTTGCACC AATGC AAATCCTTCATGAAAAAA ]
[+] EMBL BE229579 [ cgaGAAGCTGCSGAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTTCAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCA GAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGGAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGA AATGGAATTGCAACATACCGAGGGGTACCYTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCA TTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACACATGCTAGGKGGRTGYACTATTACATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAG ACACATCTACTGTGATATCTAATAG AAATTTTGACTAGCCAATGTGAA ]
[+] EMBL BI805048 [ TGTGCTTCAAATCAAGATCATACA TTGTAGA CCATTGATTCCTCCACGAAGGAGCTAAGCCTGGAGAGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGAAACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGA AATGGAATTGCAACATACCGAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCACTTAAGTGAGCAGTTATTTTAACAGATTCCCAACATTGTTGTGCTATAACACATGCTAGGTGGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCGTCCATCTACTGTGATATCTAATAGAAAATTTTGACTAGCC ATGTGAAGAACATTTGTATTACCTTGCACC AATGCAAAATCCTTCATGAAAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15075#0 TCACCCCCAAGCTCGGCGCAACCTCTCTCGACGTGCTAATGGCGGCGGCGGCGGCGGACT 60
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 TCGCGGCGAGCAAGCGGGCCATGGCCTACGCGCTCTGCAAGCACCTCAGCCTCGATCCGA 120
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 ATACAATATCCAGTACAAGTATTGAAGAGAGTGATATTGCCACCCTGTTCTCACATATTG 180
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 TGAAATCGAGTGAAGATGAGGTACTGAAATGGGTTGAATTTTCCAGCAATTTTGTTGGAA 240
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 AATGTGGAGAACAGCATGCATTGCTTGGTAATCTGAATCAAGACTTGTCCCAGAAATCAG 300
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 TTCTGTTGGGTAATGGTTTTAAACCATCAGTTGCTGATATTGTTGTGTTTGCAACCATAC 360
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 AAGTTTTTGTGAGTCATCTTGGTGAAAACGAGTTGCAGAAATATCCACATGTATTGCGGT 420
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 GGATGGACTATATCCAGAACATCGTTGATTTTGGCACAACAGTACAAAAGGTTAACTTGA 480
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 CCAAATCTGTCTTCGATCCACCTTCTCATCCAAAGAAGGCAGATAAAGGTGACACTGATC 540
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 CAAGTTCAAAGAAAGTTGTTTCAGGACAGAAGAATGTGGGCAAATCGGATGCAAATGTTG 600
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 ATTCCAAGAAAGCTGCACCAGAGAATAAAGCTCCTGAGAATAAGGCAAATCCTACTCCAG 660
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 CAAAAAATAACAAACCTTCTGGGGATAAAAAGAAAGCCCAGGAGAAATCTGCAGGAAAAC 720
consensus_15075#1 ------------------------------------------------------------
consensus_15075#0 CAAATGAGGGAGTTGCGGATAAAGCTCCACAGAAAACTGCAGAAAAGGACTCAGAATGCA 780
consensus_15075#1 ---------------------------------------------------------GCA 3
***
consensus_15075#0 ATGTCAGTATCCTGAATATACAGGTTGGCCTTATTCGCAAAGCATGGAAGCACCCATCTG 840
consensus_15075#1 ATGTCAGTATCCTGAATATACAGGTTGGCCTTATTCGCAAAGCATGGAAGCACCCATCTG 63
************************************************************
consensus_15075#0 CTGACAGCCTCTTGGTTGAGGAGATAGATTTGGGAGATGGCAATGTGCATCAAGTTGTTA 900
consensus_15075#1 CTGACAGCCTCTTGGTTGAGGAGATAGATTTGGGAGATGGCAATGTGCATCAAGTTGTTA 123
************************************************************
consensus_15075#0 GTGGGCTTGCCAAGTTCTTCAGCCCAGAGGAACTTGTTAATCGGCATGTTGTATTAATCA 960
consensus_15075#1 GTGGGCTTGCCAAGTTCTTCAGCCCAGAGGAACTTGTTAATCGGCATGTTGTATTAATCA 183
************************************************************
consensus_15075#0 CGAATGTGAAGCCTGGGAAGCTGCGAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTT 1020
consensus_15075#1 CGAATGTGAAGCCTGGGAAGCTGCGAGACGTAATGTCTGCCGGATTGGTCTTGTGTGCTT 243
************************************************************
consensus_15075#0 CAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCAGAAGGAGCTAAGCCTGGAG 1080
consensus_15075#1 CAAATCAAGATCATACAGTTGTAGAGCCATTGATTCCTCCAGAAGGAGCTAAGCCTGGAG 303
************************************************************
consensus_15075#0 AGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGA 1140
consensus_15075#1 AGCGTATTTCATTTGCAGGGTTTGATGGGAAGCCAGAAGATGTTCTTAATCCGAAGAAGA 363
************************************************************
consensus_15075#0 AACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGAAATGGAATTGCAACATACC 1200
consensus_15075#1 AACAGCTCGACAAGATCACACCGGATCTTCACACTGATGGAAATGGAATTGCAACATACC 423
************************************************************
consensus_15075#0 GAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCA 1260
consensus_15075#1 GAGGGGTACCCTTCACTACATCTGCTGGTCCATGTAGATCTTCTGTTCCTAATGCGAGCA 483
************************************************************
consensus_15075#0 TTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACACATGCTAGGT 1320
consensus_15075#1 TTAAGTGAGCAGTTATTTTAACAGATTCCAAACATTGTTGTGCTATAACACATGCTAGGT 543
************************************************************
consensus_15075#0 GGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCG 1380
consensus_15075#1 GGATGTACTATTTCATCTTGCATCTTATTACATGCCCTATCAACTGTTGTCAGCGTAGCG 603
************************************************************
consensus_15075#0 TCCATCTACTGTGATATCTAATAGAAAATTTTGACTAGCCAATGTGAAGAACATTTGTAT 1440
consensus_15075#1 TCCATCTACTGTGATATCTAATAGAAAATTTTGACTAGCCAATGTGAAGAACATTTGTAT 663
************************************************************
consensus_15075#0 TACCTTGCACCAAATGCAAAATCCTTCATGAACCCGGTTGTTTTCAGGCAGGATTTTTGA 1500
consensus_15075#1 TACCTTGCACCAA-TGCAAAATCCTTCATGAAAAAAAAAAAGGG---------------- 706
************* ******************
consensus_15075#0 TGAATCAATTTCTCTTTACCCTTTAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA 1555
consensus_15075#1 -------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||