These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15092#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1908 fasta sequence [CCAATCACCACCGGCGGCCACCACCACCACCACCACCACCATCGCCTCGCCGCCAGCCAGATCCTCCCCCTCCCCCGCGCCAATCACATCGCCTCCTCCGATTCCCAAGGATTCTTCCCGCTCTCTTTCCTTCCTTCCCCATTCATCCGCTTCTTCTTCTTCTTCTTATTCTTCTTTCTTGTTCCGATCGGGGATTCGGATTTGGGGATTCCGAGGCAGCGGCCGCGGCGGAGGCGGAGAGAGGGAGAGGATGGGGTACGTGGGGCAGCACGGGGTGGCGACGCTGCGGAGGTACAAGTACAGCGGCGTCGACCACTCGCTCGTCGCCAAGTACATCCTCCAGCCCTTCTGGTCACGATTCGTCAACCTCTTCCCGCTCTGGTTCCCGCCAAATATGATTACACTGACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGC-TTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTCATCAAGTCC-TTTAGGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGAGGCCTTGGCTTTTGGAAGCACGGCAATGTGTGGAAAAGCTACCTTCTGGTATTGGTTCATTGCTGCTGTCCCATTTTACTGCGCAACCTGGGAACACTTTTTCACAAACACA-CTAATTC-TTCCTATAGTCAAC-GGACCGACTGAAGGCCTTATGCTAATCTATTTGTGCCATTTTTTCACCTTCTTCACAGGAGCTGAATGGTGGGCACAAGATTTCCGGAAGTCAATACCCCTACTAAACTGGGTACCTCTTGTTCCTG-AGGTCCCAGTATAT-GGAATTGCACTGTTTCTAATGATAGCTTTTGCTGTAATTCCGACGATTGGATCTAACATTCACAATGTGTACAAAGTGGTCGAGGCAAGAAAAGGAAGCATGCTGCTGGCACTAGCAATGCTCTTTCCTTTTGGTTTGCTGTTGGCCGGAGTTCTTGTCTGGTCCTACCTATCTCCTTCAGATATAATGAGAAACCAGCCACATCTTCTAGTTATTGGAACTGGTTTTGCATTTGGCTTTCTTGTGGGCAGAATGATTCTGGCTCACTTATGTGATGAGCCCAAAGGTCTGAAGACAGGGATGTGCATGTCCCTAGCATATTTCCCATTTGCAATTGCA-AATGCGCTGACTGCA-CGGCTTGATGATGGAAA-CCCCC-TTGTTGAT-GAGCAGCT-AGTTCTCCT-AATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTAT-CCATGAAATCACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAACCATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTA-TTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTATCACCTAGAACTTCAATTCAGTGATGCTCGGCAAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCACCTGAGATGCAGGTGTACAATTTATGCTAAAAATGATGCTCATTATGCCTTACATATTATTCATGCTCTTTTTTTTGAGAGAGAGAGTAAACTTATATATACATACTATTATATTCTAATAGATTATTGTTCCTCTCTCCGGGTGAGCTGAAAAAAAAA] [+] EMBL AK099224 [CCAATCACCACCGGCGGCCACCACCACCACCACCACCACCATCGCCTCGCCGCCAGCCAGATCCTCCCCCTCCCCCGCGCCAATCACATCGCCTCCTCCGATTCCCAAGGATTCTTCCCGCTCTCTTTCCTTCCTTCCCCATTCATCCGCTTCTTCTTCTTCTTCTTATTCTTCTTTCTTGTTCCGATCGGGGATTCGGATTTGGGGATTCCGAGGCAGCGGCCGCGGCGGAGGCGGAGAGAGGGAGAGGATGGGGTACGTGGGGCAGCACGGGGTGGCGACGCTGCGGAGGTACAAGTACAGCGGCGTCGACCACTCGCTCGTCGCCAAGTACATCCTCCAGCCCTTCTGGTCACGATTCGTCAACCTCTTCCCGCTCTGGTTCCCGCCAAATATGATTACACTGACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGC TTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTCATCAAGTCC TTTAGGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGAGGCCTTGGCTTTTGGAAGCACGGCAATGTGTGGAAAAGCTACCTTCTGGTATTGGTTCATTGCTGCTGTCCCATTTTACTGCGCAACCTGGGAACACTTTTTCACAAACACA CTAATTC TTCCTATAGTCAAC GGACCGACTGAAGGCCTTATGCTAATCTATTTGTGCCATTTTTTCACCTTCTTCACAGGAGCTGAATGGTGGGCACAAGATTTCCGGAAGTCAATACCCCTACTAAACTGGGTACCTCTTGTTCCTG AGGTCCCAGTATAT GGAATTGCACTGTTTCTAATGATAGCTTTTGCTGTAATTCCGACGATTGGATCTAACATTCACAATGTGTACAAAGTGGTCGAGGCAAGAAAAGGAAGCATGCTGCTGGCACTAGCAATGCTCTTTCCTTTTGGTTTGCTGTTGGCCGGAGTTCTTGTCTGGTCCTACCTATCTCCTTCAGATATAATGAGAAACCAGCCACATCTTCTAGTTATTGGAACTGGTTTTGCATTTGGCTTTCTTGTGGGCAGAATGATTCTGGCTCACTTATGTGATGAGCCCAAAGGTCTGAAGACAGGGATGTGCATGTCCCTAGCATATTTCCCATTTGCAATTGCA AATGCGCTGACTGCA CGGCTTGATGATGGAAA CCCCC TTGTTGAT GAGCAGCT AGTTCTCCT AATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTAT CCATGAAATCACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAACCATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTA TTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTATCACCTAGAACTTCAATTCAGTGATGCTCGGCAAAACTTTTTTTTTGGGGGTACATATTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCACCTGAGATGCAGGTGTACAATTTATGCTAAAAATGATGCTCATTATGCCTTACATATTATTCATGCTCTTTTTTTTGAGAGAGAGAGTAAACTTATATATACATACTATTATATTCTAATAGATTA ] [+] EMBL AK068133 [CCAATCACCACCGGCGGCCACCACCACCACCACCACCACCATCGCCTCGCCGCCAGCCAGATCCTCCCCCTCCCCCGCGCCAATCACATCGCCTCCTCCGATTCCCAAGGATTCTTCCCGCTCTCTTTCCTTCCTTCCCCATTCATCCGCTTCTTCTTCTTCTTCTTATTCTTCTTTCTTGTTCCGATCGGGGATTCGGATTTGGGGATTCCGAGGCAGCGGCCGCGGCGGAGGCGGAGAGAGGGAGAGGATGGGGTACGTGGGGCAGCACGGGGTGGCGACGCTGCGGAGGTACAAGTACAGCGGCGTCGACCACTCGCTCGTCGCCAAGTACATCCTCCAGCCCTTCTGGTCACGATTCGTCAACCTCTTCCCGCTCTGGTTCCCGCCAAATATGATTACACTGACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGC TTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTCATCAAGTCC TTTAGGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGAGGCCTTGGCTTTTGGAAGCACGGCAATGTGTGGAAAAGCTACCTTCTGGTATTGGTTCATTGCTGCTGTCCCATTTTACTGCGCAACCTGGGAACACTTTTTCACAAACACA CTAATTC TTCCTATAGTCAAC GGACCGACTGAAGGCCTTATGCTAATCTATTTGTGCCATTTTTTCACCTTCTTCACAGGAGCTGAATGGTGGGCACAAGATTTCCGGAAGTCAATACCCCTACTAAACTGGGTACCTCTTGTTCCTG AGGTCCCAGTATAT GGAATTGCACTGTTTCTAATGATAGCTTTTGCTGTAATTCCGACGATTGGATCTAACATTCACAATGTGTACAAAGTGGTCGAGGCAAGAAAAGGAAGCATGCTGCTGGCACTAGCAATGCTCTTTCCTTTTGGTTTGCTGTTGGCCGGAGTTCTTGTCTGGTCCTACCTATCTCCTTCAGATATAATGAGAAACCAGCCACATCTTCTAGTTATTGGAACTGGTTTTGCATTTGGCTTTCTTGTGGGCAGAATGATTCTGGCTCACTTATGTGATGAGCCCAAAGGTCTGAAGACAGGGATGTGCATGTCCCTAGCATATTTCCCATTTGCAATTGCA AATGCGCTGACTGCA CGGCTTGATGATGGAAA CCCCC TTGTTGAT GAGCAGCT AGTTCTCCT AATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTAT CCATGAAATCACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAACCATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTA TTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTATCACCTAGAACTTCAATTCAGTGATGCTCGGCAAAACTTTTTTTTTGGGGGTACATATTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCACCTGAGATGCAGGTGTACAATTTATGCTAAAAATGATGCTCATTATGCCTTACATATTATTCATGCTCTTTTTTTTGAGAGAGAGAGTAAACTTATATATACATACTATTATATTCTAATAGATTA ] [+] EMBL CA756096 [ CAATCACATCGCCTCCTCCGATTCCCAAGGATTCTTCCCGCTCTCTTTCCTTCCTTCCCCATTCATCCGCTTCTTCTTCTTCTTCTTATTCTTCTTTCTTGTTCCGATCGGGGATTCGGATTTGGGGATTCCGAGGCAGCGGCCGCGGCGGAGGCGGAGAGAGGGAGAGGATGGGGTACGTGGGGCAGCACGGGGTGGCGACGCTGCGGAGGTACAAGTACAGCGGCGTCGACCACTCGCTCGTCGCCAAGTACATCCTCCAGCCCTTCTGGTCACGATTCGTCAACCTCTTCCCGCTCTGGTTCCCGCCAAATATGATTACACTGACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGC TTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTCATCCAGTCC TTTAGGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGAGGGCTTGGCTTTTGGAAGCACGGCAATGTGTGGGAAAGCTACCTTCTGGNATTGGGTCATTGCT ] [+] EMBL CB651395 [ GGATTTCGAGGCAGCGGCCGCGGCGGAGGCGGAGAGAGGGAGAGGATGGGGTACGTGGGGCAGCACGGGGTGGCGACGCTGCGGAGGTACAAGTACAGCGGCGTCGACCACTCGCTCGTCGCCAAGTACATCCTCCAGCCCTTCTGGTCACGATTCGTCAACCTCTTCCCGCTCTGGTTCCCGCCAAATATGATTACACTGACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGC TTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTCATCAAGTCC TTTAGGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGAGGCCTTGGCTTTTGGAAGCACGGCAATGTGTGGAAAAGCTACCTTCTGGTATTGGTTCATTGCTGCTGTCCCATTTTACTGCGCAACCTGGGAACACTTTTTCACAAACACA CTAATTC TTCCTATAGTCAAC GGACCGACTGAAGGCCTTATGCTAATCTATTTGTGCCATTTTTTCACCTTCTTCACAGGAGCTGAATGGTGGGCACAAGATTTCCGGAAGTCAATACCCCTACTAAACTGGGTACCTCTTGTTCCTG AGGTCCCAGTATAT GGAATTGCACTGTTTCTAATGATAGCTTTTGCTGTAATTCCGACGATTGG ] [-] EMBL AU164099 [ GAGGCGGAGAGAGGGAGAGGATGGGGTACGTGGGGCAGCACGGGGTGGCGACGCTGCGGAGGTACAAGTACAGCGGCGTCGACCACTCGCTCGTCGCCAAGTACATCCTCCAGCCCTTCTGGTCACGATTCGTCAACCTCTTCCCGCTCTGGTTCCCGCCAAATATGATTACACTGACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGC TTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTCATCAAGTCC TTTAGGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGAGGCCTTGG ] [-] EMBL AU095896 [ GAGAGANGGAGAGGATGGGGTACGTGGGGCAGCACGGGGTGGCGACGCTGCGGAGGTACAAGTACAGCGGCGTCGACCACTCGCTCGTCGCCAAGTACATCCTCCAGCCCTTCTGGTCACGATTCGTCAACCTCTTCCCGCTCTGGTTCCCGCCAAATATGATTACACTGACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGCTTTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTCATCAAGTCC TTTAGGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGANGCCTTGGCTTTTGGAAGCACGGCAATGTGTGGAAAAGCTACCTTCTGGTATTGGTTCATTGCTGCTGTCCCATTTTACTGCGCAACCTGGGAACACTTTTTCACAAACACA CTAATTC TTCCTATAGTCAAC GGACCGACTGAAGGCCTTATGCTAATCTATTTGTGCCATTTTTTCA CTTCTTCACAGGAGCTGAATGGTGGGCACAAGA TTCCGGNAGTCAATACCCCTACTAAACTGGGTA CTCTTGTTCCTGAAGGTCCCAGTATATGGGAATTGCACTGNTTCT ] [+] EMBL CB668945 [ GCACGGGGAGGCGACGCTGCGGAGGCACAAGTCCAGCGGCGTCGACCACTCGCTCGTCGCCAAGTACATCCTCCAGCCCTTCTGGTCACGATTCATCAACCTCTTCCCGCTCTGGTTCCCGCCAAATATGATTACACTGACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGC TTTTTTTATTCCCCTCATCTCGATACAGCACCACCTACATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTCATCAGGTCC TTTACGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGAGGCCTTGGCTTTTGGAAGCACGGCAATGTGTGGAAAAGCTACCTTCTGGTATTGGTTCATTGCTGCTGTCCCATTTTACTGCGCAACCTGGGAACACTTTTTCACAAACACATCTAATTCTTTCCTATAGTCAACAGGACCCACTGAATGCCTTATGCTAATCTATTTGTGCCATTTTTTtcc ] [+] EMBL AK059405 [ GACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGC TTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGTGGATGGTAAACAAGCAAGACGTACCAACTCATCGAGTCC TTTAGGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGAGGCCTTGGCTTTTGGAAGCACGGCAATGTGTGGAAAAGCTACCTTCTGGTATTGGTTCATTGCTGCTGTCCCATTTTACTGCGCAACCTGGGAACACTTTTTCACAAACACA CTAATTC TTCCTATAGTCAAC GGACCGACTGAAGGCCTTATGCTAATCTATTTGTGCCATTTTTTCACCTTCTTCACAGGAGCTGAATGGTGGGCACAAGATTTCCGGAAGTCAATACCCCTACTAAACTAGGTACCTCTTGTTCCTG AGGTCCCAGTATAT GGAATTGCACTGTTTCTAATGATAGCTTTTGCTGTAATTCCGACGATTGGATCTAACATTCACAATGTGTACAAAGTGGTCGAGGCAAGAAAAGGAAGCATGCTGCTGGCACTAGCAATGCTCTTTCCTTTTGGTTTGCTGTTGGCCGGAGTTCTTGTCTGGTCCTACCTATCTCCTTCAGATATAATGAGAAACCAGCCACATCCTCTAGTTATTGGAACTGGTTTTGCATTTGGCTTTCTTGTGGGCAGAATGATTCTGGCTCACTTATGTGATGAGCCCAAAGGTCTGAAGACAGGGATGTGCATGTCCCTAGCATATTTCCCATTTGCAATTGCA AATGCGCTGACTGCA CGGCTTGATGATGGAAA CCCCC TTGTTGAT GAGCAGCT AGTTCTCCT AATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTAT CCATGAAATCACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAACCATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTA TTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTATCACCTAGAACTTCAATTCAGTGATGCTCGGCAAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCACCTGAGATGCAGGTGTACAATTTATGCTAAAAATGATGCTC ] [-] EMBL C73669 [ AAGCAAGACGTCCNAACTCATCAAGTCCTTTTAGGCGAGCTATTTGACCACGGATGTGATGCGCTTGCATGTGCTTTTGAGGCCTTGGCTTTTGGAAGCACGGCAATGTGTGGAAAAGCTACCTTCTGGTATTGGTTCATTGCTGCTGTCCCATTTTACTGCGCAACCTGGGAACACTTTTTCACAAACACA CTAATTC TTCCTATAGTCAAC GGACCGACTGAAGGCCTTATGCTAATCTATTTGTGCCATTTTTTCACCTTCTTCACAGGAGCTGAATGGTGGGCACAAGATTTCCGGAAGTCAATACCCCTACTAAACTGGGTACCTCTTGTTCCTG AGGTCCCAGTATAT GGAATTGCACTGTTTCTAATGATAGCTTTTGCTGTAATTCCGACGATTGGATCTAACATTCACAATGTGTACAAAGTGGTCGAGGC ] [+] EMBL CF327650 [ TATTTGTGCCATTTTTTCACCTTCTTCACAGGAGCTGAATGGTGGGCACAAGATTTCCGGAAGTCAATACCCCTACTAAACTGGGTACCTCTTGTTCCTG AGGTCCCAGTATAT GGAATTGCACTGTTTCTAATGATAGCTTTTGCTGTAATTCCGACGATTGGATCTAACATTCACAATGTGTACAAAGTGGTCGAGGCAAGAAAAGGAAGCATGCTGCTGGCACTAGCAATGCTCTTTCCTTTTGGTTTGCTGTTGGCCGGAGTTCTTGTCTGGTCCTACCTATCTCCTTCAGATATAATGAGAAACCAGCCACATCTTCTAGTTATTGGAACTGGTTTTGCATTTGGCTTTCTTGTGGGCAGAATGATTCTGGCTCACTTATGTGATGAGCCCAAAGGTCTGAAGACAGGGATGTGCATGTCCCTAGCATATTTCCCATTTGCAATTGCA AATGCGCTGACTGCA CGGCTTGATGATGGAAA CCCCC TTGTTGAT GAGCAGCT AGTTCTCCT AATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTAT CCATGAAATCACCAATGCTCTCGGGAT ] [+] EMBL OSS13074A [ GTGTACAAAGTGGTCGAGGCAAGAAAAGGAAGCATNCTGCTGGCACTAGCAATGCTCTTTCCTTTTGGTTTGCTGTTGGCCGGAGTTCTTGTCTGGTCCTACCTATCTCCTTCAGATATAATGAGAAACCAGCCACATCTTCTAGTTATTGGAACTGGTTTTGCATTTGGCTTTCTTGT GAATGATTCTGGCTCACTTATGTGATGAGCCCAAAGGTCTGAAGACAGGGATGTGCATGTACCTAGCATATTTCCCATTTGCAATTGCANAATGCGCTGACTGCA CGGCTTGATGATGGAAA CCCCCTTTGTTGAT GAGCAGCTAAGTTCTCCTAAATGGACTGCTTATTTtac ] [+] EMBL OSS12972A [ GTGTACAAAGTGGTCGAGGCAAGAAAAGGAAGCATGCTGCTGGCACTAGCAATGCTCTTTCCTTTTGGTTTGCTGTTGGCCGGAGTTCTTGTCTGGTCCTACCTATCTCCTTCAGATATAATGAGAAACCAGCCACATCTTCTAGTTATTGGAACTGGTTTTGCATTTGGCTTTCTTGT GAATGATTCTGGCTCACTTATGTGATGAGCCCAAAGGTCTGAAGACAGGGATGTGCATGTCCCTAGCATATTTCCCATTTGCAATTGCA AATGCGCTGACTGCA CGGCTTGATGATGGAAA CCCCC TTGTTGAT GGGCAagc ] [-] EMBL CF327651 [ GATGAGCCCAAAGGTCTGAAGACAGGGATGTGCATGTCCCTAGCATATTTCCCATTTGCAATTGCA AATGCGCTGACTGCA CGGCTTGATGATGGAAACCCCCC TTGTTGAT GAGCAGCT AGTTCTCCT AATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTAT CCATGAAATCACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAACCATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTA TTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTATCACCTAGAACTTCAATTCAGTGATGCTCGGCAAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCACCTGAGATGCAGGTGTACAATTTATGCTAAAAATGATGCTCATTATGCCTTACAaaaaa ] [+] EMBL CA756019 [ GCATGTCCCTAGCATATTTCCCATTTGCAATTGCA AATGCGCTGACTGCA CGGCTTGATGATGGAAA CCCCC TTGTTGAT GAGCAGCT AGTTCTCCT AATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTAT CCATGAAATCACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAACCATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTA TTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTATCACCTAGAACTTCAATTCAGTGATGCTCGGCNAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCACCTGAGATGCAGGTGTACAATTTATGCNTANAATGATGCTCATTATGCCTTACATAT ] [+] EMBL AU096254 [ agGCATATTTCCCATTTGCAATTGCA AATGCGCTGACTGCACCGGCTTGATGATGG AA CCCCC TTGTTGATGGAGCAGCT AGTTCTCCT AATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTATCCCATGAAATCACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAACCATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTA TTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTATCACCTAGAACTTCAATTCAGTGATGCTCGGCAAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCNCCTGAGATGCAGGTGTACAATTTATGCTAAAAATGATGCTCATTATGCCTTACATATTATTCATGCTCTTTTTTTTGAGAGAGAGAGTAAACTTATATATACATACTATTATATTCTAATAGATTATTGTTCCTCTCTCCGGGTGAGCTGAAAAAAAAA] [-] EMBL OSS11444A [ tgcCTATTTACCCGAGATTGAAATTANCATCAGAACTTGTGCTGATAAGGAANCGNCGNCCTTGGAANAGTTGGATTTTGTTTGTTGTATCACCTAGANCTTCAATTCAGTGATGCNCGGCAAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCACCTGAGATGCAGGTGTACAATTTATGCTAAAAATGATGCTCATTATGCCTTACATATTATTCATGCTCTTTTTTTTGAGAGAGAGAGTAAACTTATATATACATACTATTATAT ] consensusID : consensus_15092#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 694 fasta sequence [TTTTTTTTTTTTTTTTTCCTACAGGGACAGTAGCATTTCGAGTTTTTTCTTTGATTCGTTCAACTGGGTTAGCAGTTATCGCATATGCTTATGGCGCTCACAGTTACATAGCAGGGGCATGAGGAATCCCAAGCTTTTCTTTAGCAGGGGGAGTCATTTTTTAGTTTAAAGAGCATCTTCCAGGGGGCTGCAAACAGGGGACATCAAAAGGTCAGCTTTTGTTCTCCTTGCTGGACACTGAAAAGCATCCTATTCCATACTCCTATTCAATACAGTAGTATTAGTTAATCCTTTTCTCTAACATGCTAAAGTTAGGTTCATTACAAAAATTAGGGCTATGGCTTCATTTTTACATCTCTGGCCATTTTTGCTTCCTACAGGAGGGGGTAATCTGAAACAATGGTTACTGTAATATCAGTACATAATCATTAGCTGTTTATCATCCAAACTAACTAGTTAAGCACTTATGGAGCATTTACATTATGAATTCATGCTAGGGCAATACATTATGTTGATTTCTTTGCCCAAATGTATTTGTTAAAATACTAACTTTATTCTTCTTTTCCCATGTTGGAATCAACCGCAGGCCAAATATGATTACACTGACGGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGCTTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCT] [+] EMBL CA763556 [TTTTTTTTTTTTTTTTTCCTACAGGGACAGTAGCATTTCGAGTTTTTTCTTTGATTCGTTCAACTGGGTTAGCAGTTATCGCATATGCTTATGGCGCTCACAGTTACATAGCAGGGGCATGAGGAATCCCAAGCTTTTCTTTAGCAGGGGGAGTCATTTTTTAGTTTAAAGAGCATCTTCCAGGGGGCTGCAAACAGGGGACATCAAAAGGTCAGCTTTTGTTCTCCTTGCTGGACACTGAAAAGCATCCTATTCCATACTCCTATTCAATACAGTAGTATTAGTTAATCCTTTTCTCTAACATGCTAAAGTTAGGTTCATTACAAAAATTAGGGCTATGGCTTCATTTTTACATCTCTGGCCATTTTTGCTTCCTACAGGAGGGGGTAATCTGAAACAATGGTTACTGTAATATCAGTACATAATCATTAGCTGTTTATCATCCAAACTAACTAGTTAAGCACTTATGGAGCATTTACATTATGAATTCATGCTAGGGCAATACATTATGTTGATTTCTTTGCCCAAATGTATTTGTTAAAATACTAACTTTATTCTTCTTTTCCCATGTTGGAATCAACCGCAGGCCAAATATGATTACACTGACGGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGCTTTTTTTATTCCCCTCATCTCGATACAGCACCACCTAGATGGGTGCACCT] [-] EMBL CA767504 [ TTTTCCCTACAGGGACAGTAGCATTTCGAGTTTTTTCTTTGATTCGTTCANCTGGGTTAGCAGTTATCGCATATGCTTATGGCGCTCACAGTTACATAGCATGGGCATGAGGAATCCCAAGCTTTTCTTTAGCTTGTGGAGTCATTTTTTAGTTTAGAGAGCATCTTCCAGTGGGCTGCAGACAGTGGACATCAAAATGTCAGCTTTTGTTCTCCTTGCTGGACACTGAAAAGCATCCTATTCCATACTCCTATTCAATACAGTAGTATTAGTTAATCCTTTTCTCTAACATGCTAAAGTTAGGTTCATTACAAAAGTTAGTGCTATGGCTTCATTTTTACATCTCTGGTCATTTTTGCTTCCTACAGGAGGGTGTAATCTGAAACAATGGTTACTGTAATATCAGTACATAATCATTTGCTGTTTATCATCCAAACTAACTAGTTAAGCACTTATGGAGCATTTACATTATGAATTCATGCTAGTGCAATACATTATGTTGATTTCTTTGTCCAAATGTATTTGTTAAAATACTAACTTTATTCTTCTTTTCCCATGTTGGAATCGACCGCAGGCCAAATATGATTACACTGACAGGCTTCATGTTTCTATTGACATCGGCATTCCTTGGCTT ] consensusID : consensus_15092#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 573 fasta sequence [GAGCTTGWVSAATTCGGCACGAGGGTTGATTGAGCAGCTAGTKCKSCTAATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTATCCATGAAATCACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAACCATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTATTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTATCACCTAGAACTTCAATTCAGTGATGCTCGGVAAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCNCCTNAGATGCAGGTGTACAATTTATGCTAAAAATGATGCTCATTATGCCTTACATATTATTCCAAAAAAAAAAAAAAAAAA] [+] EMBL BE229541 [GAGCTTGWVSAATTCGGCACGAGGGTTGATTGAGCAGCTAGTKCKSCTAATGTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTATCCATGAAATCACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAACCATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTATTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTATCACCTAGAACTTCAATTCAGTGATGCTCGGVAAAACTTTT ] [+] EMBL AU173268 [ AGGATCCCTAGGAAAAAGGCATAATTGTGAACCATCCNCAATTGCCTTGCTNTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAATATTTTCAATTATTTTTCATGAANATTNTGCTNTTCAGATCATATTTGCATTTGTTATTCCCAGGATTGCTATTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACGACGTCCTTGGAANAGTTGGATTTTGTTTGTTGTATCNCCTANAACTTCAATTCAGTGATGCTCGGCAAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTGTAATTTTTACATTGTAGCATCNCCTNAGATGCAGGTGTACAATTTATGCTAAAAATGATGCTCATTATGCCTTACATATTATTCCAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15092#0 CCAATCACCACCGGCGGCCACCACCACCACCACCACCACCATCGCCTCGCCGCCAGCCAG 60 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 ATCCTCCCCCTCCCCCGCGCCAATCACATCGCCTCCTCCGATTCCCAAGGATTCTTCCCG 120 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 CTCTCTTTCCTTCCTTCCCCATTCATCCGCTTCTTCTTCTTCTTCTTATTCTTCTTTCTT 180 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 GTTCCGATCGGGGATTCGGATTTGGGGATTCCGAGGCAGCGGCCGCGGCGGAGGCGGAGA 240 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 GAGGGAGAGGATGGGGTACGTGGGGCAGCACGGGGTGGCGACGCTGCGGAGGTACAAGTA 300 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 CAGCGGCGTCGACCACTCGCTCGTCGCCAAGTACATCCTCCAGCCCTTCTGGTCACGATT 360 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 CGTCAACCTCTTCCCGCTCTGGTTCCCGCCAAATATGATTACACTGACAGGCTTCATGTT 420 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 TCTATTGACATCGGCATTCCTTGGCTTTTTTTATTCCCCTCATCTCGATACAGCACCACC 480 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 TAGATGGGTGCACCTTGCACATGGAATGCTTCTCTTCCTTTACCAGACTTTTGATGCTGT 540 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 GGATGGTAAACAAGCAAGACGTACCAACTCATCAAGTCCTTTAGGCGAGCTATTTGACCA 600 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 CGGATGTGATGCGCTTGCATGTGCTTTTGAGGCCTTGGCTTTTGGAAGCACGGCAATGTG 660 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 TGGAAAAGCTACCTTCTGGTATTGGTTCATTGCTGCTGTCCCATTTTACTGCGCAACCTG 720 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 GGAACACTTTTTCACAAACACACTAATTCTTCCTATAGTCAACGGACCGACTGAAGGCCT 780 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 TATGCTAATCTATTTGTGCCATTTTTTCACCTTCTTCACAGGAGCTGAATGGTGGGCACA 840 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 AGATTTCCGGAAGTCAATACCCCTACTAAACTGGGTACCTCTTGTTCCTGAGGTCCCAGT 900 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 ATATGGAATTGCACTGTTTCTAATGATAGCTTTTGCTGTAATTCCGACGATTGGATCTAA 960 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 CATTCACAATGTGTACAAAGTGGTCGAGGCAAGAAAAGGAAGCATGCTGCTGGCACTAGC 1020 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 AATGCTCTTTCCTTTTGGTTTGCTGTTGGCCGGAGTTCTTGTCTGGTCCTACCTATCTCC 1080 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 -----------------------------------------TTTTTTTTTTTTTTTTTCC 19 consensus_15092#0 TTCAGATATAATGAGAAACCAGCCACATCTTCTAGTTATTGGAACTGGTTTTGCATTTGG 1140 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 TACAGGGACAGTAGCATTTCGAGTTTTTTCTTTGATTCGTTCAACTGGGTTAGCAGTTAT 79 consensus_15092#0 CT----TTCTTGTGGGCAGAATGATTCTGGCTCACTTATGTGATGAGCCCAAAGGTCT-- 1194 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 CGCATATGCTTATGGCGCTCACAGTTACATAGCAGGGGCATGAGGAATCCCAAGCTTTTC 139 consensus_15092#0 ----GAAGACAGGGATGTGCATGTCCCTAGCATATTTCCCATTTGCAATTGCAAATGCGC 1250 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 TTTAGCAGGGGGAGTCATTTTTTAGTTTAAAGAGCATCTTCCAGGGGGCTGCAAACAGGG 199 consensus_15092#0 TG-ACTGCACGGCTTGATGATGGAAACCCCCTTGTTGAT-GAGCAGCTAGTTCTCCTAAT 1308 consensus_15092#2 ---------GAGCTTGWVSAATTCGGCACGAGGGTTGATTGAGCAGCTAGTKCKSCTAAT 51 consensus_15092#1 GACATCAAAAGGTCAGCTTTTGTTCTCCTTGCTGGACACTGAAAAGCATCCTATTCCATA 259 * * * * * ** *** * * consensus_15092#0 GTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTATCCATGAAAT 1368 consensus_15092#2 GTACTGCTTATTTACCGTGGCTCTCTACATGCATTTTGCTACATCTGTTATCCATGAAAT 111 consensus_15092#1 CTCCTATTCAAT-ACAGTAGTATTAGTTAATCCTTTTCTCTAACATGCTAAAGTTAGGTT 318 * ** * * * ** ** * * * * **** * ** ** * * consensus_15092#0 CACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAAC 1428 consensus_15092#2 CACCAATGCTCTCGGGATTCATTGCTTCAGGATCACTAGGAAAAAGGCATAATTGTGAAC 171 consensus_15092#1 CATTACAAAAATTAGGGCT-ATGGCTTCA---TTTTTACATCTCTGGC-CATTTTTGCTT 373 ** * * ** * ** ****** * ** *** * ** ** consensus_15092#0 CATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAA 1488 consensus_15092#2 CATCCACAATTGCCTTGCTCTGGTTGGCAATCATATGTTATATTTGCGCAAAAAGGCAAA 231 consensus_15092#1 CCTACAGGAGGGGGTAATCTGAAACAATGGTTAC-TGTAATATCAGTACATAATCATTAG 432 * * ** * * * * * *** **** * ** ** * consensus_15092#0 TATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTC 1548 consensus_15092#2 TATTTTCAATTATTCTTCATGAAGATTCTGCTCTTCAGATCATATTTGCATTTGTTATTC 291 consensus_15092#1 CTGTTT--ATCATCCAAACTAACTAGTTAAGCACTTATGGAGCATTTACATTATGAATTC 490 *** ** ** * * * * * * * **** **** **** consensus_15092#0 CCAGGATTGCTATTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACG 1608 consensus_15092#2 CCAGGATTGCTATTATCCGAGATTGAAATTATCATCAGAACTTGTGCTGATAAGGAAACG 351 consensus_15092#1 ATGCTAGGGCAAT-ACATTATGTTGATTTCTTTGCCCAAATGTAT-TTGTTAAAATACTA 548 * ** ** * * **** * * * ** * * ** *** * consensus_15092#0 ACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTA-TCACCTAGAACTTCAATTCAGTGAT 1667 consensus_15092#2 ACGTCCTTGGAAGAGTTGGATTTTGTTTGTTGTA-TCACCTAGAACTTCAATTCAGTGAT 410 consensus_15092#1 ACTTTATT-------CTTCTTTTCCCATGTTGGAATCAACCGCAGGCCAAATATGATTAC 601 ** * ** * *** ***** * *** * * *** * * consensus_15092#0 GCTCGGCAAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTG 1727 consensus_15092#2 GCTCGGVAAAACTTTTTTTTTGGGGGTACATGTTGAGCAGATTGGCAGATGATACATTTG 470 consensus_15092#1 ACT--GACGGGCTTCATGTTTCTATTGACAT-CGGCATTCCTTGGCTTTTTTTATTCCCC 658 ** * *** * *** **** * ***** * ** consensus_15092#0 TAATTTTTACATTGTAGCATCACCTGAGATGCAGGTGTACAATTTATGCTAAAAATGATG 1787 consensus_15092#2 TAATTTTTACATTGTAGCATCNCCTNAGATGCAGGTGTACAATTTATGCTAAAAATGATG 530 consensus_15092#1 TCATCTCGATAC---AGCACCACCT-AGATG--GGTGCACCT------------------ 694 * ** * * * **** * *** ***** **** ** consensus_15092#0 CTCATTATGCCTTACATATTATTCATGCTCTTTTTTTTGAGAGAGAGAGTAAACTTATAT 1847 consensus_15092#2 CTCATTATGCCTTACATATTATTCCAAA----------AAAAAAAAAAAAAAA------- 573 consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 ATACATACTATTATATTCTAATAGATTATTGTTCCTCTCTCCGGGTGAGCTGAAAAAAAA 1907 consensus_15092#2 ------------------------------------------------------------ consensus_15092#1 ------------------------------------------------------------ consensus_15092#0 A 1908 consensus_15092#2 - consensus_15092#1 - |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||