These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15101#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1018 fasta sequence [GAAGGAGTAGAAACTTTCTCTCCACTTTTTACGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATC-GGCGTGC-GGCTTCGGCAGC-GGCAGC-GGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGC-GGATCCAGCGACGGCTCGGAGACGAGGAGGTTCGGGCGGTGG-ATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGGAGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGT-GG-GGATGCATCCAGCGCCCCGACTGCTCCTTGCCGACGACAGCCGCTGCCCTGACCGCTTCCTCGCCGTGCAGGTCATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTTTGAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCTGCCCTGAAGCGGTTGGTGTATGAAGTAGAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATACTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATAAAAAATCTCCCGTGTGTAATTTTCTTTAAAAAAAAAATTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF334990 [GAAGGAGTAGAAACTTTCTCTCCACTTTTTACGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATC GGCGTGC GGCTTCGGCAGC GGCAGC GGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGC GGATCCAGCGACGGCTCGGAGACGAGGAGGTTCGGGCGGTGG ATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGGAGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGT GG GGATGCATCCAGCGCCCCGACTGCTCCTTGCCGACGACAGCCGCTGCCCTGA ] [+] EMBL CF296024 [ TTCTCTCCACTTTTTATGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATC GGCGTGC GGCTTCGGCAGC GGCAGC GGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGC GGATCCAGCGACGGCTCtg ] [+] EMBL CF279767 [ CTCTCCACTTTTTACGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATC GGCGTGC GGCTTCGGCAGC GGCAGC GGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGC GGATCCAGCGACGGCTCGGAGACGAGGAGGTTCGGGCGGTGG ATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGGAGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGTGGG GGATGCATCCAGCGCCCCGACTGCTCCTTGCCGACGACAGCCGCTGCCCTGACCGCTTCCTCGCCGTGCAGGTCATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTTTGAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCTGCCCTGAAGCGGTTG ] [+] EMBL CF279089 [ TCTCCACTTTTTACGGATCTTCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATC GGCGTGC GGCTTCGGCAGC GGCAGC GGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGC GGATCCAGCGACGGCTTTTTTACTAGGAGGTTCGGGCGGTGGTATCCGGTGATGCCGAGGCGCGTTGGNGCCGGATCTAGTATCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGGAGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGT GG GGATGCATCCAGCGCCCCGACTGCTCCTTGCCGACGACAGCCGCTGCCCTGACCGCTTCCTCGCCGTGCAGGTCATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTTTGAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTC ] [+] EMBL CF312654 [ TCTCCACTTTTTACGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATC GGCGTGC GGCTTCGGCAGC GGCAGC GGCAGTTCAGGGATGAGGAGGAGTGGCAGCAAGGC GGATCCAGCGACGGCTCGGAGACGAGGAGGTTCGGGCGGTGG ATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGGAGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGT GG GGATGCATCCAGCGCCCCGACTGCTCCTTGCCGACGACAGCCGCTGCCCTGACCGCTTCCTCGCCGTGCAGGTCATGCCGGCGGCCGCCC ] [+] EMBL CF333731 [ CTCCACTTTTTACGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATC GGCGTGC GGCTTCGGCAGC GGCAGC GGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGC GGATCCAGCGACGGCTCGGAGACGAGGAGGTTCGGGCGGTGG ATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGGAGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGT GGNGGATGCATCCAGCGCCCCGACTGCTCCTTGCCGACGACAGCCGCTGCCCTGACCGCCTCCTCGCCGTGCAGGTCATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTNTGAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCTGCCCTGAAGCGGTTGG ] [+] EMBL AU174408 [ TTACGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATCAGGCGTGCAGGCTTCGGCAGCAGGCAGCAGGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGCAGGATCCAGCGACGGCTCGGAGACGAGGAGGTTCGGGCGGTGG ATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGGAGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGT GG GGATGCATCCAGCGCCCCGACTGCTCCTTGCCGACGACAGCCGCTGCCCTGACCGCTTCCTCGCCGTGCA ] [+] EMBL AU033300 [ TTACGGATCTGCCGTTCCCCTCCCCCCGCNTCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATC GGCGTGC GGCTTCGGCAGC GGCAG GCCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGC GGATCCAGCGACGCCTCGGAGACGAGGAGGTTCGGGCGGTGG ATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCT ] [-] EMBL CF312655 [ GGT GG GGATGCATCCAGCGCCCCGACTGCTCC TGCCGACGACAGCCGCTGCCCTGACCGCTTCCTCGCCGTGCAGGTCATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTTTGAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCTGCCCTGAAGCGGTTGGTGTATGAAGTAGAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATACTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATAAAAAA ] [+] EMBL CF329702 [ ACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTCCCGTGTGTAATTTTCTTTAAAAAAAAAATTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_15101#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 988 fasta sequence [TGGACTGAAGGAGTAGAAACTCTCCACTTTTTACGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATCGGCGTGCGGCTTCGGCAGCGGCAGCGGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGCGGATCCAGCGACGGCTCGGAGACGAGGAGGTTCGGGCGGTGGATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGGNAGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGTCATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTTTGAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCTGCCCTGAAGCGGTTGGTGTATGAAGTANAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATACTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTCCCGTGTGTAATTTTCTTTACTGGTCATGTGATAGAACCAAAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTATTCGTAAAGATATTACTGAAGAGATTAAAATTATAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF281870 [TGGACTGAAGGAGTAGAAACTCTCCACTTTTTACGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATCGGCGTGCGGCTTCGGCAGCGGCAGCGGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGCGGATCCAGCGACGGCTCGGAGACGAGGAGGTTCGGGCGGTGGATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGGNAGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGTCATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTTTGAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCTGCCCTGAAGCGGTTGGTGTATGAAGTANAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATACTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTC ] [+] EMBL AK071086 [ ACGGATCTGCCGTTCCCCTCCCCCCGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATCGGCGTGCGGCTTCGGCAGCGGCAGCGGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGCGGATCCAGCGACGGCTCGGAGACGAGGAGGTTCGGGCGGTGGATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGCGTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATGTCACAGAGGATCCCCTCTCCAGCTAGAGGG AGGATGGGCGCCACCCATGAACCGGCGACGGGATGGGTCATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTTTGAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCTGCCCTGAAGCGGTTGGTGTATGAAGTAGAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATACTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTCCCGTGTGTAATTTTCTTTACTGGTCATGTGATAGAACCAAAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTATTCGTAAA ] [+] EMBL CB682544 [ TGCATGAAAGTTCTAAGGTTTTGTGGATCATACTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTCCCGTGTGTAATTTTCTTTACTGGTCATGTGATAGAACCAAAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTATTCGTAAAGATATTAC ] [-] EMBL CF279088 [ ATGAAAGTTTTAAGGTTTTGTGGATCATACTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGCTCCGAATATCAACTGATCGTCATCCTTGACACGGCCATTGTCAACGTTTGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAAAAATGTCGACTTGGGATGAGCGCCCCGCAAATAACGACTGGCTCCGGTGGCAGGAGGTTTGAAGAATTTTGGCGGCTGATGTCCTCTGCCCTGTAATTTTTTTGGAAAGAACCCATTTTTACTTCGTTGATGCCCCCGTTTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTCCCGTGGGTAATTTTCTTTACTGGTCATGTGATAGAACCAAAATACAATTGTCCTGATATCCCCATGTTTTTGGTGATTTTAATACTATTCGTAAAGATATTACTGAAGAGATTAAAATTATAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF279768 [ GTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATCTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTCCCGTGTGTAATTTTCTTTACTGGTCATGTGATAGAACCAAAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTATTCGTAAAGATATTACTGAAGAGATTAAAATTATAAAAAAAA ] [-] EMBL CF296025 [ TGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTCCCGTGTGTAATTTTCTTTACTGGTCATGTGATAGAACCAAAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTATTCGTAAAGATATTACTGAAGAGATTAAAATTATAAAAAA ] [-] EMBL CF334991 [ TTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTCCCGTGTGTAATTTTCTTTACTGGTCATGTGATAGAACCAAAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTATTCGTAAAGATATTACTGAAGAGATTAAAAaaaaa ] consensusID : consensus_15101#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 540 fasta sequence [GAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCCTGCCCTGAAGCGGTTGGTGTATGAAGTAGAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATACTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTC-CCGTGTGTAATTTTCTTTAAAAATCATGTGATAGAACCAAAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTAAAAAAAAAAAA] [-] EMBL CF333732 [GAAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCCTGCCCTGAAGCGGTTGGTGTATGAAGTAGAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATACTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTC CCGTGTGTAATTTTCTTTACTGGTCATGTGATAGAACCAAAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTAAAAAAAAAAAA] [+] EMBL CF331856 [ TGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTC CCGTGTGTAATTTTCTTTAAAAA ] [-] EMBL CF331855 [ GATATTAAGAAATTGTTCCGAATATCAACTGATCGTCATCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGATGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGAGATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCATTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGATGAATGTCTATATATTGTCTCNCCGTGTGTAATTTTCTTTAAAAAa ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15101#1 TGGACTGAAGGAGTAGAAACT----CTCCACTTTTTACGGATCTGCCGTTCCCCTCCCCC 56 consensus_15101#2 ------------------------------------------------------------ consensus_15101#0 ------GAAGGAGTAGAAACTTTCTCTCCACTTTTTACGGATCTGCCGTTCCCCTCCCCC 54 consensus_15101#1 CGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATCGGCGTGCGGCTTCGGCAGCGGCA 116 consensus_15101#2 ------------------------------------------------------------ consensus_15101#0 CGCGCCGCCGCCGCCGCCGTCGAGTCGTGCCCGTATCGGCGTGCGGCTTCGGCAGCGGCA 114 consensus_15101#1 GCGGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGCGGATCCAGCGACGGCTCGGAGAC 176 consensus_15101#2 ------------------------------------------------------------ consensus_15101#0 GCGGCAGTTCAGGGATGAGGAGGAGTGGCGGCAAGGCGGATCCAGCGACGGCTCGGAGAC 174 consensus_15101#1 GAGGAGGTTCGGGCGGTGGATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGC 236 consensus_15101#2 ------------------------------------------------------------ consensus_15101#0 GAGGAGGTTCGGGCGGTGGATCCGGTGATGCCGAGGCGCGTGGGTGCCGGATCTAGTAGC 234 consensus_15101#1 GTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATG 296 consensus_15101#2 ------------------------------------------------------------ consensus_15101#0 GTCGGCGTCGTCCTTCGCTCTGCCTCTGCTTCGTCAACTACTCGGCCGGCAGTGGCGATG 294 consensus_15101#1 TCACAGAGGATCCCCTCTCCAGCTAGAGGGNAGGATGGGCGCCACCCATGAACCGGCGAC 356 consensus_15101#2 ------------------------------------------------------------ consensus_15101#0 TCACAGAGGATCCCCTCTCCAGCTAGAGGGA-GGATGGGCGCCACCCATGAACCGGCGAC 353 consensus_15101#1 GGGATGGGT--------------------------------------------------- 365 consensus_15101#2 ------------------------------------------------------------ consensus_15101#0 GGGATGGGTGGGGATGCATCCAGCGCCCCGACTGCTCCTTGCCGACGACAGCCGCTGCCC 413 consensus_15101#1 ------------------------CATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTTTG 401 consensus_15101#2 -----------------------------------------------------------G 1 consensus_15101#0 TGACCGCTTCCTCGCCGTGCAGGTCATGCCGGCGGCCGCCCCCACTGTTCCCTCGCTTTG 473 * consensus_15101#1 AAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCC-TGCCCTGAA 460 consensus_15101#2 AAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCCCTGCCCTGAA 61 consensus_15101#0 AAGAGTTGGACCAAATTTCCGGAAGCTGCCGTTGATGGAGGTCAACGCCC-TGCCCTGAA 532 ************************************************** ********* consensus_15101#1 GCGGTTGGTGTATGAAGTANAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATA 520 consensus_15101#2 GCGGTTGGTGTATGAAGTAGAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATA 121 consensus_15101#0 GCGGTTGGTGTATGAAGTAGAGAAGGACTGCATGAAAGTTCTAAGGTTTTGTGGATCATA 592 ******************* **************************************** consensus_15101#1 CTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCA 580 consensus_15101#2 CTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCA 181 consensus_15101#0 CTGTGACCATGGCCCGGCGGCTGATATTAAGAAATTGTTCCGAATATCAACTGATCGTCA 652 ************************************************************ consensus_15101#1 TCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGA 640 consensus_15101#2 TCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGA 241 consensus_15101#0 TCCTCGACACGGCCATCGTCAACGCTCGTCGCCGGCGGCCAACATGAAGGGCAGGGGTGA 712 ************************************************************ consensus_15101#1 TGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGA 700 consensus_15101#2 TGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGA 301 consensus_15101#0 TGCAGAGATGTCGACTTGGGATGAGCGCGCCGCAAATAACGACTGGCTCCGGTGGCAGGA 772 ************************************************************ consensus_15101#1 GATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCA 760 consensus_15101#2 GATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCA 361 consensus_15101#0 GATTTGAAGAATCTTGGCGGCTGATGTCCTCTGCACTGTAATTTTTTTGGAAAGAACCCA 832 ************************************************************ consensus_15101#1 TTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGA 820 consensus_15101#2 TTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGA 421 consensus_15101#0 TTTCTACTTCGTTGATGCCACCGTCTGGCATTCACAGTCATGTAATACTAGTGTTCAAGA 892 ************************************************************ consensus_15101#1 TGAATGTCTATATATTGTCTCCCGTGTGTAATTTTCTTTACTGGTCATGTGATAGAACCA 880 consensus_15101#2 TGAATGTCTATATATTGTCTCCCGTGTGTAATTTTCTTTAAAAATCATGTGATAGAACCA 481 consensus_15101#0 TGAATGTCTATAAAAAATCTCCCGTGTGTAATTTTCTTTAAAAAAAAAATTTTTTAAAAA 952 ************ * *********************** * * * ** * consensus_15101#1 AAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTATTCGTAAAGATA 940 consensus_15101#2 AAATACAATTGTCCTGATATCACCATGTTTTTGGTGATCTTAATACTAAAAAAAAAAAA- 540 consensus_15101#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1012 *** * ** * * * * * ** * * *** * consensus_15101#1 TTACTGAAGAGATTAAAATTATAAAAAAAAAAAAAAAAAAAAAAAAAA 988 consensus_15101#2 ------------------------------------------------ consensus_15101#0 AAAAAA------------------------------------------ 1018 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||