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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15107#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 960 fasta sequence
[CAGTTCTTCTCCAAACCCAACCCCCCCAAGAGGCCAAAACCCTCTCCTATATAGCCACACTCATCCTTGCAATTAGCTCAACTCAGCTCAAGTTGGCAATTCATATCAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCCTTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTACCAGTACGCGCTCGTCGGCGAGCCGCGGCGCAA-GGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGACGTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGC-GCCCACCGA-CACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACG-ATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACT-CTTACACGTGCTTAAAAATAAAAAAA]
[+] EMBL AK071108 [CAGTTCTTCTCCAAACCCAACCCCCCCAAGAGGCCAAAACCCTCTCCTATATAGCCACACTCATCCTTGCAATTAGCTCAACTCAGCTCAAGTTGGCAATTCATATCAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCCTTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTACCAGTACGCGCTCGTCGGCGAGCCGCGGCGCAA GGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGACGTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGC GCCCACCGA CACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACG ATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACT CTT ]
[+] EMBL AU070280 [ TCCAAACCCAACCCCCCCAAGAGGCCAAAACCCTCTCCTATATAGCCACACTCATCCTTGCAATTAGCTCAACTCAGCTCAAGTTGGCNATTCATATCAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGNGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAA ]
[+] EMBL AU197823 [ CCAAAACCCTCTCCTATATAGCCACACTCATCCTTGCAATTAGCTCAACTCAGCTCAAGTTGGCAATTCATATCAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCCTTCCTCCC ]
[+] EMBL CF281659 [ aaaAACTCAGCTCAAGTCGGCAATTCATATCAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCATCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCCTTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTACCAGTACGCGCTCGTCGGCGAGCCGCGGCGCAA G ]
[+] EMBL CF278679 [ TCAAGTTGGCAATTCATATCAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCCTTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTACCAGTACGCGCTCGTCGGCGAGCCGCGGCGCAAGGGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACG ]
[+] EMBL CF296599 [ TCAAGTTGGCAACTCATATCAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACTCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCCTTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTACCAGTACGCGCTCGTCGGCGAGCCGCGGCGCAA GGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACG ]
[+] EMBL CF277697 [ TCAAGTTGGCAATTCATATCAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTAC ]
[+] EMBL CF292579 [ TTGGCAATTCATATCAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCCTTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTACCAGTACGCGCTCGTCGGCGAGCCGCGGCGCAA GGACCTGT ]
[+] EMBL AU068167 [ CAAACAGATAACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGNGNGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCNTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGG ACCGCCTACAAGGCCGACCCGGCAAGCNACGAGGCCAAG TTAAAGTCAAGTTTTACCTTCCCCCTTTCTTC ]
[+] EMBL CA754221 [ TCGTCACAGCAACACAATCACCACGACGACGATGGCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGACGTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCCTTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTACCAGTACGCGCTCGTCGGCGAGCCGCGGCGCAA GGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCC AGGAGGAAGGGTACGACGTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGNCGGAGAGCGACGCCGC GCCCACCGA CACCNAGGGGACGTGGTGGTTCAAGTCGCTCTTCG ]
[+] EMBL AU057884 [ TACGAGATCGCTTCGCTGCCCAACTTCTTCCAGCCCCGGGACGGCCGGGACACCCGNNCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGACGTGCTGAACGA ACGTGGACCAGCAGCGGGAAGCGCGACTACATCAAGGGCACCGCCTACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCCTTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTACCAGTACGCGCTCGTCGGCGAGCCGCGGCGCAA GGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGACGTCGAGAA NTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGC GCCCACCGA CACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACG ATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACT CTTACACGTGCTTAATTTTAAAAAAA]
[-] EMBL CF278680 [ GTCGGCGAGCCGCGGCGCAA GGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGACGTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGC GCCCACCGA CACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACG ATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACT CTTACACGTGCTTAATTTTAAAAAAA]
[-] EMBL CF292580 [ GGCGAGCCGCGGCGCAA GGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGACGTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGC GCCCACCGA CACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACG ATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGCGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACT CTTACACGTGCTTAAAAAaa ]
[-] EMBL CF277698 [ GCGAGCCGCGGCGCAA GGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGACGTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGC GCCCACCGA CACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACG ATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACT CTTACACGTGCTTAAAAA ]
[-] EMBL CF296600 [ GCGCAA GGACCTGTGGATCCTGTGCCGGCAGACGAGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGACGTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGCGGCCCACCGANCACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACG ATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACT CTTACACGTGCTTAAAAA ]
[-] EMBL CF295697 [ CGCAGGACGACCCGCCGCCGGAGAGAGACGCCGC GCCCACCGA CACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGAAAAATGGATGGATCAGA GANCACGAATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAAATAATTACACGTGCTTAAAAAa ]
consensusID : consensus_15107#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 819 fasta sequence
[CCAAGTGTTACTTGAGCACTGGTCATCATAGGCNTTCTGCATG-CTTATCTTCTTACCGGTTGTTCTGAGTTTGTGTGGCCCCCCTTCAAAGGTGATG-AACCTCTCGAACAGA-TCAACCTTCAGCTTCGTCCGATTAAAGTTGACAACGGGAGAATTCA-CCCAATTGAACATCAGTACACCAGATAGGGATACATGGAAATCAGCCATTCTGAAACTCGCAGAGCATCCCTGTGGTCATCCATCTCT-CCTGGTGCGAAGTAGCAGTGCAGTGTACAGTATTTCTAGAGGTGCAAGCCATTTTATTCTATACTTAGATTCATAGGAAAAAGGGTTGTGCATTAGTTAAAGCTCAGTTTACAAAACTAGATTAGATAGCGTCTCCACACGGAAAAGGGTA-GCAGCGGGGTGGCTTATTCGCATTAGTAGTTTGAGTTGGTTCGTGCGGTGCATTTGTGACGACGCTTTATTCTAGCATGACGCTCTGCTTTCATGTAACGAGAA-CAAGAGAACGGCGAATGAGTTGACAATGTTTGAGCCTTTTGTGGATTCACACAAAAAAAAAAAAAAAAAAAAGCGACGCCGCGCCCACCGACACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACGATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACTCTTACACGTGC]
[+] EMBL BM037713 [CCAAGTGTTACTTGAGCACTGGTCATCATAGGCNTTCTGCATG CTTATCTTCTTACCGGTTGTTCTGAGTTTGTGTGGCCCCCCTTCAAAGGTGATGAAACCTCTCGAACAGAGTCAACCTTCAGCTTCGTCCGATTAAAGTTGACAACGGGAGAATTCACCCCAATTGAACATCAGTACACCAGATAGGGATACATGGAAATCAGCCATTCTGAAACTCGCAGAGCATCCCTGTGGTCATCCATCTCTCCCTGGTGCGAAGTA CAGTGCAGTGTACAGTATTTCTAGAGGTGCAAGCCATTTTATTCTATACTTAGATTCATAGGAAAAAGGGTTGTGCATTAGTTAAAGCTCAGTTTACAAAACTAGATTAGATAGCGTCTCCACACGGAAAAGGGTATGCAGCGGGGTGGCTTATTCGCATTAGTAGTTTGAGTTGGTTCGTCCGGTGCATTTGTGACGACGCTTTATTCTAGCATGACGCTCTGCTTTCATGTAACGAGAA CAAGAGAACGGCGAATGAGTTGACAATGTTTGAc ]
[+] EMBL BI806867 [ AGCACTTGTCATCATAGGCTTTCTGCATGCCTTATCTTCTTACCGGTTGTTCTGAGTTTGTGTGGCCCCCCTTCAAAGGTGATG AACCTCTCGAACAGA TCAACCTTCAGCTTCGTCCGATTAAAGTTGACAACGGGAGAATTCA CCCAATTGAACATCAGTACACCAGATAGGGATACATGGAAATCAGCCATTCTGAAACTCGCAGAGCATCCCTGTGGTCATCCATCTCT CCTGGTGCGAAGTAGCAGTGCAGTGTACAGTATTTCTAGAGGTGCAAGCCATTTTATTCTATACTTAGATTCATAGGAAAAAGGGTTGTGCATTAGTTAAAGCTCAGTTTACAAAACTAGATTAGATAGCGTCTCCACACGGAAAAGGGTA GCAGCGGGGTGGCTTATTCGCATTAGTAGTTTGAGTTGGTTCGTGCGGTGCATTTGTGACGACGCTTTATTCTAGCATGACGCTCTGCTTTCATGTAACGAGAACCAAGAGAACGGCGAATGAGTTGACAATGTTTGAGCCTTTTGTGGATTCACACAAAAAAAAAA ]
[-] EMBL CB638504 [ GAGCATCCCTGTGGTCATCCATCTCT CCTGGTGCGAAGTAGCAGTGCAGTGTACAGTATTTCTAGAGGTGCAAGCCATTTTATTCTATACTTAGATTCATAGGAAAAAGGGTTGTGCATTAGTTAAAGCTCAGTTTACAAAACTAGATTAGATAGCGTCTCCACACGGAAAAGGGTA GCAGCGGGGTGGCTTATTCGCATTAGTAGTTTGAGTTGGTTCGTGCGGTGCATTTGTGACGACGCTTTATTCTAGCATGACGCTCTGTTTTCATGTAACGAGAA CAAGAGAACGGCGAATGAGTTGACAATGTTTGAGCCTTTTGTGGATTCACACATTCTGTAGCAAAAAAAAAAGCGACGCCGCGCCCACCGACACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACGATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTGTTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACTCTTACACGTGC]
[-] EMBL CF295608 [ TCGGCAAATGATCGAGAAATTCTCAGCGGCCGATGGATGGATCAGAGGACGACGATGTATAGCTATAGTATGAATTTGCCTTCAGTAGCAGTGGAGAATAAAATGGACTTTTGGAGAGAGTGTGTTCTTGAaaaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15107#0 CAGTTCTTCTCCAAACCCAACCCCCCCAAGAG--GCCAAAACCCTCTCCTATATAGCCAC 58
consensus_15107#1 -------------------------CCAAGTGTTACTTGAGCACTGGTCATCATAGGCNT 35
***** * * * * ** * **** *
consensus_15107#0 ACT-CATCCTTGCAATTAGCTCAACTCAGCTCAAGTTG-GCAATTCATATCAAACAGATA 116
consensus_15107#1 TCTGCATGCTTATCTTCTTACCGGTTGTTCTGAGTTTGTGTGGCCCCCCTTCAA-AGGTG 94
** *** *** * * * ** * *** * * * ** ** *
consensus_15107#0 ACATCAGTAGTTCGCAGCTAGATCGATCGTCACAGCAACACAATCACCACGACGACGATG 176
consensus_15107#1 AT----GAACCTCTCGAACAGATCAACCTTCAGCTTCGTCCGATTA--AAGTTGACAACG 148
* * * ** * ***** * * *** * ** * * * *** * *
consensus_15107#0 GCGGCGGCGGCGGTGGAGAAGAAGAGCGGGAGCGAGATGACGGTGGTGCGGGGGCTGGAC 236
consensus_15107#1 GGAGAATTCACCCAATTGAACATCAGTACA--CCAGATAGGGATA-CATGGAAATCAGCC 205
* * * *** * ** * **** * * ** * *
consensus_15107#0 GTGGCGAGGTACATGGGCCGGTGGTACGAGATCGCGTCGCTGCCCAACTTCTTCCAGCCC 296
consensus_15107#1 ATTCTGAAACTCGCAGAGCATC----------CCTGTGGTCATCCATCTC--TCCTGGTG 253
* ** * * * * ** * *** ** *** *
consensus_15107#0 CGGGACGGCCGGGACACGCGGGCGACGTACGCGCTGCGGCCCGACGGCGCGACGGTGGAC 356
consensus_15107#1 CGAAGTAGC-----------AGTGCAGTGTACAGTATTTCTAGA-GGTGCAA-----GCC 296
** ** * * ** * * * ** ** ** * * *
consensus_15107#0 GTGCTGAACGAGACGTGGACCAGCAGCGGGAAGCGCGACTACATCA---AGGGCACCGCC 413
consensus_15107#1 ATTTTATTCTATACTTAGATTCATAGGAAAAAGGGTTG-TGCATTAGTTAAAGCTCAGTT 355
* * * * ** * ** ** *** * * *** * * ** * *
consensus_15107#0 TACAAGGCCGACCCGGCCAGCGACGAGGCCAAGCTCAAGGTCAAGTTCTACCTGCCCCCC 473
consensus_15107#1 TACAAAACTAGATTAGATAGCGTCT---CCACACGGAAAA--GGGTAGCAGCGGGGTGGC 410
***** * * **** * *** * ** ** * * * *
consensus_15107#0 TTCCTCCCCGTCATCCCCGTCGTCGGCGACTACTGGGTGCTCTACGTCGACGACGACTAC 533
consensus_15107#1 TTATTCGC-ATTA-----GTAGTTTG-AGTTGGTTCGTGCGGTGCATTTGTGACGACGCT 463
** ** * * * ** ** * * * **** * * * ******
consensus_15107#0 CAGTACGCGCTCGTCGGCGAGCCGCGGCGCAAGGACCTGTGGATCCTGTGCCGGCAGACG 593
consensus_15107#1 TTATTCTAGCATGACGCTCTGCTTTCATGTAACGA-----GAACAAGAGAACGGCGAATG 518
* * ** * ** ** * ** ** * * **** * *
consensus_15107#0 AGCATGGACGACGAGGTGTACGGGCGGCTGCTGGAGAAGGCCAAGGAGGAAGGGTACGAC 653
consensus_15107#1 AG--TTGACAA-----TGTTTGAGCCTTTTGTGGATTCACACAAAAAAAAAAAAAAAAA- 570
** * *** * *** * ** * **** *** * ** * *
consensus_15107#0 GTCGAGAAGCTGCGCAAGACGCCGCAGGACGACCCGCCGCCGGAGAGCGACGCCGCGCCC 713
consensus_15107#1 -------------------------------------------AAAGCGACGCCGCGCCC 587
* ***************
consensus_15107#0 ACCGACACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCT 773
consensus_15107#1 ACCGACACCAAGGGGACGTGGTGGTTCAAGTCGCTCTTCGGCAAATGATCGAGAAATTCT 647
************************************************************
consensus_15107#0 CAGCGGCCGATGGATGGATCAGAGGACGACGATGTATAGCTATAGTATGAATTTGCCTTC 833
consensus_15107#1 CAGCGGCCGATGGATGGATCAGAGGACGACGATGTATAGCTATAGTATGAATTTGCCTTC 707
************************************************************
consensus_15107#0 AGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTG 893
consensus_15107#1 AGTAGCAGTGGAGAATAAAATGGACTTTTGGTGTGAGTGTGTTCTTGAGGTGATTGTGTG 767
************************************************************
consensus_15107#0 TTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACTCTTACACGTGCTTAAAAAT 953
consensus_15107#1 TTTGTAATGCTGTGCTTTACAGGAATTAATGGAAATGAACTCTTACACGTGC-------- 819
****************************************************
consensus_15107#0 AAAAAAA 960
consensus_15107#1 -------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||