These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15121#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1918 fasta sequence [GCATGGAGGAGGAGGAGGAGGAGCATAAAATTCCCCAACCTGGCAATCGCCTGGAGCCTTCGAACCCTAGCGGGGTAGCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC-GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAACCCCATCACCACCACGGAGATCGTCCTCCCTCCCC-TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATCAGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGCGCAGTTGCAATTCGAGCTAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTGCTATGACCATCTTGGACCAAGGGATCAGATGATGCCGATGAAGCTCACTGTCTGTTCAGAGACACTCATCCCTTTCAATTATAGGAGGTTCGCGATCGGACCTCTCGAACCGGACCTAAATGCGCCGGCGACGGTCGAGCCATTGTTGCCAGAGGGGAACCTCCCGTTTGATCCTGCCACCAGTTTCGCTCCGCCATACAACACCGTGTCTGCTTTTACCAATGCCAAGAACATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAATGGATTCTTGAATATAATAAAAACAAAAATATAA] [+] EMBL CB666087 [GCATGGAGGAGGAGGAGGAGGAGCATAAAATTCCCCAACCTGGCAATCGCCTGGAGCCTTCGAACCCTAGCGGGGTAGCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGCGCTTCGAACTCGCGGCGATACTGACGG ] [+] EMBL CB665997 [GCATGGAGGAGGAGGAGGAGGAGCATAAAATTCCCCAACCTGGCAATCGCCTGGAGCCTTCGAACCCTAGCGGGGTAGCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTCTTCAACCCCATCACCACCACGGAGATCGTCCTCCCGCCCC TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGC ] [+] EMBL CB640424 [ CGGGGTACCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACtgttttttc ] [+] EMBL CB642358 [ GATCACCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTCTTCAACCCCATCACCACCACGGAGATCGTCCTCCCGCCCC TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGC ] [+] EMBL CB624896 [ TCAGCCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAACCCCATCACCACCACGGAGATCGTCCTCCCTCCCC TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATCAGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGCGCAGTTGCAATTCGAGCTAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTGCTATGACCATCTTG ] [+] EMBL CB637264 [ CCGCCGGCGCCGCCCATCGCCGACGCAGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTC TTTGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAAAGCGC ] [+] EMBL CB635587 [ AGCCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGC GTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAACCCCATCACCACCACGGAGATCGTCCTCCCTCCCC TGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCCCGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCACCGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCTCACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATCAGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGCGCAGTTGCAATTCGAGCTAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTG ] [-] EMBL BI810114 [ CCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCGCGGGGCTGTGCACGGCGTGGCGGTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGACGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGCGATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAA GGGTGG TCGTCCTGTCCATCGCGCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAA CCCATCA CACCACGGAGATCGTCCTCCCTCCCCGTGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAAGCCCG CAAGGACGACTACGCCGC ] [+] EMBL CF326185 [ gGGTAAGGTCTACTGCCTCACGAGGTGCGGATACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGC ] [+] EMBL CF326728 [ TAAGGTCTACTGCCTCACGAGGTGCGGAGACGTGCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATCAGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGTGTTTTTGCAATTCGAGCTAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTGCTATGACCATCTTGGACCAAGGGATCAGATGATGCCGATGAAGCTCACTGTCTGTTCAGAGACACTCATCCCTTTCAATTATAGGAGGTTCGCGATCGGACCTCTCGAACCGGACCTAAATGCGCCGGCGACGGTCGAGCCATTGTTGCCAGAGGGGAACCTCCCGTTTGATCCTGCCACCAGTTTCGCTCCGCCATACAACACCGTGTCTGCTTTTACCAATGCCAAGAACATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGG ] [-] EMBL CB666088 [ TGCCAAGAACATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAA ] [-] EMBL CB679010 [ ATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCCCCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTAGAAGGAAACAATCGCTGTCATCTTGTTGAGC TGTAaaaaaagga ] [-] EMBL CB665998 [ ATTGTGCTGTGTGAGGGCAACTTGTACCAGATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCGTCATATTATGATGGAATAAGAAAATGGATTCT ] [-] EMBL CB635588 [ AAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCGTGTATCAGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAA ] [-] EMBL CB664125 [ CCGGAGGCGGTCACCGTCGTGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGATGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTTGACATGGAAACCGGGAGGTTTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATTTGCTGGTTTTTTTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCCCAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCCCCGATCCCGATGATAGAAGTTTGAGCTTATGTTCCATAGCAAAAGTGTGATTTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTTTCTGTTTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAA ] [-] EMBL CB642359 [ CTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGATGTATGCTGAGGGTGTGCATGGTTTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTTGACATGGAAACCGGGAGGTTTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATTTGCTGGTTTTTTTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGGAGGGGAGTTTTTCAGACCCGATCAAGGTCCCGTGCGGAACGTGCCCAGGATATGGAAGAGTAATGCGTCGCCCGATTGCTTGGTGACATAGTGGGTTTCCCCGATCCCGATGATAGAAGTTTGAGCTTATGTTCCATAGCAAAAGTGTGATTTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTTTTTGTTTAGTTGGGCTTAAGTAACTTGTATCATCCTTATATATTTGTGTAAAGAAACAATCGCTGTCATCTTGTTGAGCGTGTATTCTTCATATTATGATGGAATAAGAAAATGGCTTTTTGAATATAATAAAAACAAAAATATAA] [-] EMBL CB637265 [ TATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGGTAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTTTACGCCTTGCTATCCTTTGGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATATAGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCGTGCGGAGCGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTAT ] [+] EMBL CF302082 [ GAGTGTTTATCAGACACGATCAAGGTCCCGTGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATC ] [+] EMBL AK058824 [ CAGATTGCTTGGTGACATAGTGGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATCTGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTTTATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTCGTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATTCATCATATTATGATGGAATAAGAAAATGG ] consensusID : consensus_15121#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 177 fasta sequence [GCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCTGCTGTGTGGGCTGTTGCCACGTGCCTGNTGTGCTGTGTCTGGCGCTTGTCTGCCTGTGCTGNTCTGCCGGGGGTGGCTCCTCGTTGGCTT] [+] EMBL BM422214 [GCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACCTGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCTGCTGTGTGGGCTGTTGCCACGTGCCTGNTGTGCTGTGTCTGGCGCTTGTCTGCCTGTGCTGNTCTGCCGGGGGTGGCTCCTCGTTGGCTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15121#0 GCATGGAGGAGGAGGAGGAGGAGCATAAAATTCCCCAACCTGGCAATCGCCTGGAGCCTT 60 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 CGAACCCTAGCGGGGTAGCCGCCCCGGATCAGCCGCCGGCGCCGCCCATCGCCGACGCAG 120 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 CCGACGCGGGCGCGGCCGCCATGGCGCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACC 180 consensus_15121#1 -------------------------GCCGTTCAGGCGCTGGGCGGACCTGCCGCCGGACC 35 *********************************** consensus_15121#0 TGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGC-GCGGGGCG 239 consensus_15121#1 TGCTGTGCCGCGTCGGCGACAGGCTGGACCTCAAGTGCTACGCCAGCGCGCTGCTGTGTG 95 *************************************************** ** * * * consensus_15121#0 TGCACGGCGTGGCG-GTCGGCGCTGTCGCCGGCGTCGCCGGCGCTCCTCGTGCTGTCCGA 298 consensus_15121#1 GGC-TGTTGCCACGTGCCTGNTGTGCTGTGTCTGGCGCTTGT-CTGCCTGTGCTGNTC-- 151 ** * * ** * * * ** * * *** * ** * ****** * consensus_15121#0 CGCCAGGATGTGCCCCTCGGCGGCGTCCCTCCCGACGCGGCGGTGCTTCGACCTCGCGGC 358 consensus_15121#1 TGCCGGGGGTGGCTCCTCGTTGGCTT---------------------------------- 177 *** ** ** ***** *** * consensus_15121#0 GATACTGACGGGGGGCAGATGCGTCGGGTCCAGCAACGGGTGGCTCGTCCTGTCCATCGC 418 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 GCTCTACGGCGGGCAGAGCGCGTTCGTGCTTTTCAACCCCATCACCACCACGGAGATCGT 478 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 CCTCCCTCCCCTGATCTACGAGAGCAGGTGGGTCTCCAAGGTCGTGTTCGCGCCCAGCCC 538 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 CGCCAAGGACGACTACGCCGCCGCCGCCATCTGCGACATCGACAGGATCGCCTACGTCAC 598 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 CGCGGGCGCCAGGAGGTGGGCCGTCCTCGACCCCGTCCGCCTCGTCACCGGCGACCAGCT 658 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 CACCGACGTCGTCTACCACGACAAAGGTAAGGTCTACTGCCTCACGAGGTGCGGAGACGT 718 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 GCACCTGCTCCGCCTCCCCGAGCGCCGTCGCCGGAAACCCGCCGATGAGCCAGGGCCATC 778 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 AGAACAACCACCAGAGGCACCAGTGGTGCCGCTTCCTGAATGCGCAGTTGCAATTCGAGC 838 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 TAGGCGAACCCAACTCCACCACAACTTTCGCATGGTCTGCTATGACCATCTTGGACCAAG 898 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 GGATCAGATGATGCCGATGAAGCTCACTGTCTGTTCAGAGACACTCATCCCTTTCAATTA 958 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 TAGGAGGTTCGCGATCGGACCTCTCGAACCGGACCTAAATGCGCCGGCGACGGTCGAGCC 1018 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 ATTGTTGCCAGAGGGGAACCTCCCGTTTGATCCTGCCACCAGTTTCGCTCCGCCATACAA 1078 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 CACCGTGTCTGCTTTTACCAATGCCAAGAACATTGTGCTGTGTGAGGGCAACTTGTACCA 1138 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 GATCTGGAGGAATGCAAGCTGCACTGTGACTTTGCAGCTGCCCGGAGGCGGTCACCGTCG 1198 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 TGTATCGGAGAATGAAATCTTGGTTCTAAGGTACTACCCCCGTCGCCAGCCGTGCTGGGA 1258 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 TGCTGTGACAGACTTGGGGGGCTACTCAGTGTTTGTTGGGCGGAACAATGCCGTGTCGAT 1318 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 GTATGCTGAGGGTGTGCATGGTCTCAAGGGCAACTGTGTGTACTGGATTGGTGGGCGTGG 1378 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 TAGGGATCAGGGCATGGTGTTCGACATGGAAACCGGGAGGTCTACGCCTTGCTATCCTTT 1438 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 GGTTGGTGGCATGCCAGGGCCTTTGCAAAGCACGATCTGCTGGTTCTTCTTGAGTGATAT 1498 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 AGTGAACGCCAGCAACAATAGTGGAGGAAGGAGAGTTTATCAGACACGATCAAGGTCCCG 1558 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 TGCGGAACGTGCACAGGATATGGAAGAGTAATGCGTCGCCAGATTGCTTGGTGACATAGT 1618 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 GGGTTTCACCGATCACGATGATAGAAGTTTGAGCTTATGTACCATAGCAAAAGTGTGATC 1678 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 TGAACGTGCATAAGTTGTGGCAGAGCTGGTGTTTCAAAACTGCCCGTGTAGCCGATAGTT 1738 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 TATTGCGATTTGTTTGTTTTCCAAATCAATTTTCTCTGTCTAGTTGTGCTTATGTAACTC 1798 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 GTATCATCCTTATATATTTGTGTAATGAAACAATCGCTGTCATCTTGTTGAGCTTGTATT 1858 consensus_15121#1 ------------------------------------------------------------ consensus_15121#0 CATCATATTATGATGGAATAAGAAAATGGATTCTTGAATATAATAAAAACAAAAATATAA 1918 consensus_15121#1 ------------------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||