cluster # 15124

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Oryza sativa
cluster # 15124 cluster # 15124 Sequences # 20 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15124#0 length = 1377 sequences # 13
consensus_15124#1 length = 508 sequences # 5

consensus_15124#2 length = 292 sequences # 1
consensus_15124#3 length = 153 sequences # 1

consensusID : consensus_15124#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1377
fasta sequence

                              [CTCACGCGGCTTCTCAAATTCGCACGCGACGGGATAAAAAGAAAAAAGAAGAGGAATAATTCGAAGGGAAGAGGAGGAGGAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCCTCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCGAGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACTGGACTTGGTAGGATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACAGTTTTGTACTTGTTCTTTGGACTACGTTTGTTATACATT-GC-TT-GGAAGTCTGA-CCCAAAGGGATCT-CAGAAGAAGGAAATGGAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAATCAACCCTTCGCCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATCTTAACCTTCTTAGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACCCA-CAA-GAATGCAATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA-TTTCACAACGGACA-GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAACTTATACAATATATATACACTATGTTGTTCAAAAATCCTTGCGTATAGAATATTATTCTGGTACCAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK073686             [CTCACGCGGCTTCTCAAATTCGCACGCGACGGGATAAAAAGAAAAAAGAAGAGGAATAATTCGAAGGGAAGAGGAGGAGGAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCCTCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCGAGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACTGGACTTGGTAGGATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACAGTTTTGTACTTGTTCTTTGGACTACGTTTGTTATACATT GC TT GGAAGTCTGA CCCAAAGGGATCT CAGAAGAAGGAAATGGAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAATCAACCCTTCGCCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATCTTAACCTTCTTAGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACCCA CAA GAATGCAATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA TTTCACAACGGACA GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAACTTATACAATATATATAC                                                                                                   ]
[+] EMBL CF327969             [                                                                            GAGGAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCCTCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCG GCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCGAGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACTGGACTTGGTAGGATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACAGTTTTGTACTTGTTCTTTGGACTACGTTTGTTATACATT GCTTT GGAAGTCTGA CCCAAAGGGATCT CAGAAGAAGGAAATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF315256             [                                                                                                ATCCTGCTGCCACTGCTCGACTCCTCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCGAGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGTAATGCGGCACCCCAAGTCAATCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACTGGACTTGGTAGGATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACAGTTTTGTACTTGTTCTTTGGACTACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK104618             [                                                                                                                                     CAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCGAGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACTGGACTTGGTAGGATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACAGTTTTGTACTTGTTCTTTGGACTACGTTTGTTATACATT GC TT GGAAGTCTGA CCCAAAGGGATCT CAGAAGAAGGAAATGGAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAATCAACCCTTCGCCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATCTTAACCTTCTTAGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACCCA CAA GAATGCAATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA TTTCACAACGGACA GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGC                                                                                                                                                                            ]
[+] EMBL AK061749             [                                                                                                                                     CAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCGAGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACTGGACTTGGTAGGATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACAGTTTTGTACTTGTTCTTTGGACTACGTTTGTTATACATT GC TT GGAAGTCTGA CCCAAAGGGATCT CAGAAGAAGGAAATGGAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAATCAACCCTTCGCCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATCTTAACCTTCTTAGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACCCA CAA GAATGCAATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA TTTCACAACGGACA GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGC                                                                                                                                                                            ]
[+] EMBL AU095755             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTTTGGGANACGTTTGTTATACATTGGC TTGGGAAGTCTGACCCCAAAGGGATCT CAGAAGAAGGAAATGNAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAATCAACCCTTCGCCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATCTTAACCTTCTTAGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACCCA CAA GAATGCAATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA TTTCACAACGGACA GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTNTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAACTTATACAATATATATACACTATGTTGTTCAAAAAaaaa                                                                              ]
[+] EMBL AU093015             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCTGA CCCAAAGGGATCTCCAGAAGAAGGAAATGGAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAATCAACCCTTCGCCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATCTTAACCTTCTTAGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACCCA CAA GAATGCAATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA TTTCACAACGGACA GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAACTTATACAATATATATACACTATGTTGTTCAAGGTTCCTTGCGTATAGAATATTATTCTGGTACCAAAAAAA                                             ]
[+] EMBL BI809696             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCGCTTGCAACCCACCAAGGAATCCAATCGGAGTACCAGTTGGAGCATCATT GGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA TTTCACAACGGACA GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAACTTACACAATATATATACACTATGTTGTTCAAAAA                                                                                  ]
[-] EMBL CF321483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA TTTCACAACGGACA GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAACTTATACAATATATATACACTATGTTGTTCAAAAA                                                                                  ]
[-] EMBL CF315257             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA TTTCACAACGGACA GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAACTTATACAATATATATACACTATG TGTTCAAA                                                                                    ]
[-] EMBL CF327970             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGA TTTCACAACGGACA GTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAACTTATACAATATATATACACTATGTTGTTCAAAAAaaaa                                                                              ]
[+] EMBL BI800034             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   tGGAGCATTTTGGCATCCCAGATTTTCACAACGGACATGTTGCAACAATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATTAACAGCTCCTTACTCTTGCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTTGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGGCATCTAACTTATACAATATATATACACTATGTTGTTCAAGGTTCCTTGCGTATAGAATATTATTCTGGTACCCAAAAAAAAAA                                         ]
[+] EMBL CF333557             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAACTTATACAATATATATACACTATGTTGTTCAAGGTTCCTTGCGTATAGAATATTATTCTGGTACCATTTTCTAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_15124#0
CTCACGCGGCTTCTCAAATTCGCACGCGACGGGATAAAAAGAAAAAAGAAGAGGAATAAT
TCGAAGGGAAGAGGAGGAGGAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCC
TCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATC
CGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCG
CCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGT
TCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATG
AGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCG
AGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAA
TCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACTGGACTTG
GTAGGATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACAGTTTTGT
ACTTGTTCTTTGGACTACGTTTGTTATACATTGCTTGGAAGTCTGACCCAAAGGGATCTC
AGAAGAAGGAAATGGAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAATCAACCC
TTCGCCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATCTTAACCT
TCTTAGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACCCACAAGA
ATGCAATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAG
TCATAGGTGGGAGCATGTTGGCATCCAAGATTTCACAACGGACAGTTGCAACAATCGGAG
GTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAG
CATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGC
AAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCA
TGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCA
GAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTACCTGACATCTAA
CTTATACAATATATATACACTATGTTGTTCAAAAATCCTTGCGTATAGAATATTATTCTG
GTACCAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15124#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 508
fasta sequence

                              [CACTGACATGGATGAGGAGTAGAAAAAAAATGAGGAATAATTCGAAGGGAAGAGGAGGAGGAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCCTCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTC-AGCGAGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTA]

[+] EMBL CF305396             [CACTGACATGGATGAGGAGTAGAAAAAAAATGAGGAATAATTCGAAGGGAAGAGGAGGAGGAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCCTCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTC AGCGAGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTA]
[+] EMBL OSS10808A            [                                            AAGGGAAGAGGAGGAGGAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCCTCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTNCGNCANCGTGGCGGTCGCCGAGGACGG GAATCGACGGGGGGATCGAAGGTCTCGCTNGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTNAAGAAGGAAGCAGTTGTNGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTTTTCGATGCGCTCTTCGCGAGTCTCTCGATG                                                                                                                         ]
[+] EMBL BE040531             [                                                                    CAATATCTCATCCTGCTGCCACTGCTCGACTCCTCCTACCCTCCCCCAAATCCGCGAGCCCCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAA                                                                                                                                                                                                             ]
[+] EMBL AU030831             [                                                                     AATATCTCATCCTGCTGCCACNGCTCGACTCCTCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCNCCGCCACCGTGGCGGTCGCCGAGGACGG GAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAG NCATNGGGTGGCCCTCGATGAGGTCGGCCCCGG                                                                                                                                                           ]
[+] EMBL C28536               [                                                              tcntncatATATCTCATCCTGCTGCCACTGCTCGANTCCTCCTTATCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTTGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGGGAGTCTCTCGATGATCTTAGTCAACCNAGATTGGAGATG                                                                                               ]




>consensus_15124#1
CACTGACATGGATGAGGAGTAGAAAAAAAATGAGGAATAATTCGAAGGGAAGAGGAGGAG
GAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCCTCCTACCCTCCCCCAAATC
CGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAACCCTAGACTTCTCAT
CCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAGGACGGCGAATCGAC
GGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTGCACGGGCTGAAGAA
GGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGTCGGCCCCGGGCTGTT
CGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCGAGATTGGAGATGAAACCTT
TATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGTTCTGTCTGGTGCGCT
ATCGGCGCTCTACGTGATGACGGTACTA

consensusID : consensus_15124#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 292
fasta sequence

                              [TTTCTTGATNCCCTTTGGTCNCCCTGCTCCCTGTNTTGAGCAAATGAGTAGNGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTNCCTGACATCTAANTTATACAATATATATACACTATGTTGTTCANGGTTCCTTGNGTAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU030832             [TTTCTTGATNCCCTTTGGTCNCCCTGCTCCCTGTNTTGAGCAAATGAGTAGNGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTCTGATTTTTTGCTTGGTTGTNCCTGACATCTAANTTATACAATATATATACACTATGTTGTTCANGGTTCCTTGNGTAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_15124#2
TTTCTTGATNCCCTTTGGTCNCCCTGCTCCCTGTNTTGAGCAAATGAGTAGNGGAATTAA
ATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTATAGCCCTTGCAAATG
AAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAGCCGTCTCGATGATGA
AATCATGTCTGATTTTTTGCTTGGTTGTNCCTGACATCTAANTTATACAATATATATACA
CTATGTTGTTCANGGTTCCTTGNGTAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15124#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 153
fasta sequence

                              [AAAGGACGAGACAAGGGGGATGATAAAATCATGTTTGATTTTTGCTTGGTTGTACCTGGCATCTAACTTATACAATATATATACACTATGTTGTTCAAGGTTCCTTGCGTATAGAATATTATTCTGGTACCATTTTCTAAAAAAAAAAAAAAA]

[-] EMBL CA760452             [AAAGGACGAGACAAGGGGGATGATAAAATCATGTTTGATTTTTGCTTGGTTGTACCTGGCATCTAACTTATACAATATATATACACTATGTTGTTCAAGGTTCCTTGCGTATAGAATATTATTCTGGTACCATTTTCTAAAAAAAAAAAAAAA]




>consensus_15124#3
AAAGGACGAGACAAGGGGGATGATAAAATCATGTTTGATTTTTGCTTGGTTGTACCTGGC
ATCTAACTTATACAATATATATACACTATGTTGTTCAAGGTTCCTTGCGTATAGAATATT
ATTCTGGTACCATTTTCTAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      CTCACGCGGCTTCTCAAATTCGCACGCGACGGGATAAAAAGAAAAAAGAAGAGGAATAAT 60
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      TCGAAGGGAAGAGGAGGAGGAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCC 120
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      TCCTACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATC 180
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      CGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCG 240
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      CCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGT 300
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      TCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATG 360
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      AGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCG 420
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      AGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAA 480
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      TCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACTGGACTTG 540
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      GTAGGATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACAGTTTTGT 600
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      ACTTGTTCTTTGGACTACGTTTGTTATACATTGCTTGGAAGTCTGACCCAAAGGGATCTC 660
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      AGAAGAAGGAAATGGAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAATCAACCC 720
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      TTCGCCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATCTTAACCT 780
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      TCTTAGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACCCACAAGA 840
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      ATGCAATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAG 900
consensus_15124#1      ------------------------------------------------------------
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      TCATAGGTGGGAGCATGTTGGCATCCAAGATTTCACAACGGACAGTTGCAACAATCGGAG 960
consensus_15124#1      --------------CACTGACATGGATGAGGAGTAGAAAAAAAATGAGGAATAATTCGAA 46
                                                                                   

consensus_15124#2      ------------------------------------------------------------
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      GTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAG 1020
consensus_15124#1      GGGAAGAGGAGGAGGAGGATCTCAATATCTCATCCTGCTGCCACTGCTCGACTCCTCCTA 106
                                                                                   

consensus_15124#2      -------------------TTTCTTGATNCCCTTTGGTCNCCCTGCTCCCTGTNTTGAGC 41
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      CATTAACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGC 1080
consensus_15124#1      CCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAAC 166
                                                                                   

consensus_15124#2      AAATGAGTAGNGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGAT-----TCGCA 96
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      AAATGAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGAT-----TCGCA 1135
consensus_15124#1      CCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGAG 226
                                                                                   

consensus_15124#2      ATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGA----CCATGCTA------CTTCA 146
consensus_15124#3      ------------------------------------------------------------
consensus_15124#0      ATTCATGTATAGCCCTTGCAAATGAAATTGTTCCTGA----CCATGCTA------CTTCA 1185
consensus_15124#1      GACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTTG 286
                                                                                   

consensus_15124#2      CTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTC-TGATTTTTTGCTTGGT 205
consensus_15124#3      --------AAAGGACGAGACAAGGGGGATGATAAAATCATGTT-TGATTTTT-GCTTGGT 50
consensus_15124#0      CTTCAGTCTATAGCAGAAGCCGTCTCGATGATGAAATCATGTC-TGATTTTTTGCTTGGT 1244
consensus_15124#1      CACGGGCTGAAGAAGGAAGCAGTGGTGGAGG-GAGACCATGGGGTGGCCCTCGATGAGGT 345
                                *     **  *      *  *   * * ****   **    *      ***

consensus_15124#2      TGTNCCTGACATCTAANTTATACAATATATATACACTATGTTGTTCANGGTTCCTTGNGT 265
consensus_15124#3      TGTACCTGGCATCTAACTTATACAATATATATACACTATGTTGTTCAAGGTTCCTTGCGT 110
consensus_15124#0      TGTACCTGACATCTAACTTATACAATATATATACACTATGTTGTTCAAAAATCCTTGCGT 1304
consensus_15124#1      CGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCGAGAT 405
                        *  ** *   * *    *   *  *             * ** **             *

consensus_15124#2      AAAAAAAAAAAA----------------AAAAAAAAAAAAAAA----------------- 292
consensus_15124#3      ATAGAATATTATTCTGGTACCATTTTCTAAAAAAAAAAAAAAA----------------- 153
consensus_15124#0      ATAGAATATTATTCTGGTACCAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAA 1364
consensus_15124#1      TGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGT 465
                            *    *                   **     *                      

consensus_15124#2      -------------------------------------------
consensus_15124#3      -------------------------------------------
consensus_15124#0      AAAAAAAAAAAAA------------------------------ 1377
consensus_15124#1      TCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTA 508