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Oryza sativa
cluster # 1513 cluster # 1513       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1513#0 length = 2490 sequences # 1  
 consensus_1513#1 length = 601 sequences # 1  
consensusID : consensus_1513#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2490
fasta sequence 
                              [TCGCCTCCCCTCCCCTCCCCTCCCCTCCCCTCTTCCCTCTCCGGCAAGGCAGCAACAGTGCTGCACCACCACCACCGCCACCGCGGCCTCTCCTCCTCCCCGCCGCGCCGCGCCACGCCGCCATGAACACCAACACTCAAACCGGCGGCGGCAACTCCGCCCCCCGCGATCTCCGCCGGCCGGCGAGATGGCGGCATGTACGCCCTACCCTCCCCGCCCCGTCGACCGATCCACCTGCTCCTCGCTCCAGGCCGCTCTGCTCCGCGTTTCTGATCCAGTTCCGGCGGCAAGCCGGAGCGGCAGCGCATGCGGCGGCCACCTCCACGGCGGAGGGCTCCGCCTCCGTTCTCGTTACGCCGGCGAGTAGCCCTGCTTTGGGCCGGCCCAACAATTCACGGTTCCGGCCCAACATTGGTAACGAGCCGAGCTGAGTCCAAGCCGAGCCGCTGTTTTTTTAAGCCTCGCGCGTGCCCGCCTCTGCTGTTCTTTCTCTCGCCCTCTGCTGCTGTTCCCTTCTCCTTTCTGACACGATCAAGAAACGATCAAGAAATCGGCTGCTCCCACTTCTCCTATCTGCGAGAAGAAATCAAGAAACCCTACAGAGGAGAGGATCGGGGGGAACAAGATTCCTGAAGCCATGAAACTGAGTCTCATTTCCGACGGCGACATCCCCGACAGCCAGGATGATCAAGGCTCCGGTGGAAGAGCGGATGGGCGACAGGTCCTAGAGAGAGGAGGAGGAGGAGGCAAGAGGAGAAGACGGGTTTTCTTGGAGGAGGAAGACGAGGACGAGAATGCGATGAAAGTTGATGAAGAAGCCGTGATACTTTCCTGCGCGCGTGGAGGCCCTGCGGGCGTCTCGACGGCCAAAATTGATGGATGCATCGATAAACAGGATGGACAAGGCAGCAGCAAGCAAAGAAAGAAGAGCTGCAGCACGGTTATGAAGCTACAATTTAGAGAAATCGGATTGCACTGCTCTTTGAGGACATGCGGCATCAGCAGATTCGTACCCACACCTTCAACATTCTCACATGAGGTCTTCTCCAAGATAAAGAACAATAAGGTCGTATTTGATATCTACAGATGTAAGGATGTCATTCGACACTTAGAGAGGCCTATCAGGAAGAGATCTGCAGTTCTGCAGATTCTTCCATTAAAAGATCTTGTTGCTGTAGTGTTATGCTCTGGTTTGAGCTTTTTACTCAGCAGAGTAACAAATAAAATGATATCAATCCTCAACAGATATGACGATGAAATAATTGTCTCTATATTCTACAACAAGGAGGACAAATCTGTGATTACAACTTCTTCTCGTTTGTTTGATGGCTGCATGTCTCGTCAGGTCACATCAACCCCACTTGAGTGCATTAGGTCAAACAAGCAGAATAATGGTCAGCAGATTTTTGAATCAGAAAATATAAAATAGCCAGATAGTGTGGACTTTGATGCACCAAATGCAAGAGCATTGATACAACAACGCAGCACCTACCGAGTTTTTGACTTAAAGGATTATTCTCTGCTGTATCAAATACCTGATGTGAATGTCCATCAAGTTGTTTTTAGGCCATCATTGTTCCTTATAAAGCTGGAGCAGACACATAATGTCTATCCTTTCAGGATATTTTGTGCTCAGAACTTTGAAGAAACACACTCGTTTGTGCTTGTTGCTAGCTCGAAACGACCTGATATTCAACCTCTACATGACAAGATGATAATAAAGCAGAATTTTGCGAATGAGAATGGAAACCTCCAGATACTTGATTTGCGTAGTTCAAAGATCACCGAGGTACCTATTGGGATATATGAGTTCCATGCACTGCATGGTAGAAACCTATTCTTGTCTTTCCAGAATAACTCAACAGAACTGAGAGATCTTCAAGGAGATATAGTGAGAAATTTTGAGGATCATGTACTAGATGAACTGAATTGCGTGGATGATAAGTTGTTCATAACAAAAGATGAGGATGTTATTATTTCTGGATGCAAGTCAGAAGGTATCGGAGCGGTGCATATAAGCTCCATAGAAAGTGGAAAATGCATTACAGACATCAATACCAAGGTTATTGTTTCTGCATTGTCATATAATCCTGAGTTGAATGAGATTTACATTGGGACGGCAAAGGGGAAGGTGCAAGTATGGAGTGCCTGATTCTACACGTTTTTAACCATGTCAATGGCACTGGCAGATCTTGACATTCTACCACATCAGATACTGCAGAAGTTGAAAAGCCCCAATAAAGATAGCTGATCTTGATTGAAAACTTTCTGAATTTCCACGATCGTATCCATGTAAAACTTCAAAAAATGAAATGGATGGCGCTTATTGAGTTGTAGTCCTGATTGAAAACTTTCTGAATTTCTCCACGATCGTATCCATGTAAAACTTCAAACAATGAAATGGATGGCGCTTATTGAGTTGTAGTCGTCCGGTAGCGTTGTTTCTGCTTTGTTCATTCATCAATACTGGGATGTTCAGATTTTTGAGGC]

[+] EMBL AK109550             [TCGCCTCCCCTCCCCTCCCCTCCCCTCCCCTCTTCCCTCTCCGGCAAGGCAGCAACAGTGCTGCACCACCACCACCGCCACCGCGGCCTCTCCTCCTCCCCGCCGCGCCGCGCCACGCCGCCATGAACACCAACACTCAAACCGGCGGCGGCAACTCCGCCCCCCGCGATCTCCGCCGGCCGGCGAGATGGCGGCATGTACGCCCTACCCTCCCCGCCCCGTCGACCGATCCACCTGCTCCTCGCTCCAGGCCGCTCTGCTCCGCGTTTCTGATCCAGTTCCGGCGGCAAGCCGGAGCGGCAGCGCATGCGGCGGCCACCTCCACGGCGGAGGGCTCCGCCTCCGTTCTCGTTACGCCGGCGAGTAGCCCTGCTTTGGGCCGGCCCAACAATTCACGGTTCCGGCCCAACATTGGTAACGAGCCGAGCTGAGTCCAAGCCGAGCCGCTGTTTTTTTAAGCCTCGCGCGTGCCCGCCTCTGCTGTTCTTTCTCTCGCCCTCTGCTGCTGTTCCCTTCTCCTTTCTGACACGATCAAGAAACGATCAAGAAATCGGCTGCTCCCACTTCTCCTATCTGCGAGAAGAAATCAAGAAACCCTACAGAGGAGAGGATCGGGGGGAACAAGATTCCTGAAGCCATGAAACTGAGTCTCATTTCCGACGGCGACATCCCCGACAGCCAGGATGATCAAGGCTCCGGTGGAAGAGCGGATGGGCGACAGGTCCTAGAGAGAGGAGGAGGAGGAGGCAAGAGGAGAAGACGGGTTTTCTTGGAGGAGGAAGACGAGGACGAGAATGCGATGAAAGTTGATGAAGAAGCCGTGATACTTTCCTGCGCGCGTGGAGGCCCTGCGGGCGTCTCGACGGCCAAAATTGATGGATGCATCGATAAACAGGATGGACAAGGCAGCAGCAAGCAAAGAAAGAAGAGCTGCAGCACGGTTATGAAGCTACAATTTAGAGAAATCGGATTGCACTGCTCTTTGAGGACATGCGGCATCAGCAGATTCGTACCCACACCTTCAACATTCTCACATGAGGTCTTCTCCAAGATAAAGAACAATAAGGTCGTATTTGATATCTACAGATGTAAGGATGTCATTCGACACTTAGAGAGGCCTATCAGGAAGAGATCTGCAGTTCTGCAGATTCTTCCATTAAAAGATCTTGTTGCTGTAGTGTTATGCTCTGGTTTGAGCTTTTTACTCAGCAGAGTAACAAATAAAATGATATCAATCCTCAACAGATATGACGATGAAATAATTGTCTCTATATTCTACAACAAGGAGGACAAATCTGTGATTACAACTTCTTCTCGTTTGTTTGATGGCTGCATGTCTCGTCAGGTCACATCAACCCCACTTGAGTGCATTAGGTCAAACAAGCAGAATAATGGTCAGCAGATTTTTGAATCAGAAAATATAAAATAGCCAGATAGTGTGGACTTTGATGCACCAAATGCAAGAGCATTGATACAACAACGCAGCACCTACCGAGTTTTTGACTTAAAGGATTATTCTCTGCTGTATCAAATACCTGATGTGAATGTCCATCAAGTTGTTTTTAGGCCATCATTGTTCCTTATAAAGCTGGAGCAGACACATAATGTCTATCCTTTCAGGATATTTTGTGCTCAGAACTTTGAAGAAACACACTCGTTTGTGCTTGTTGCTAGCTCGAAACGACCTGATATTCAACCTCTACATGACAAGATGATAATAAAGCAGAATTTTGCGAATGAGAATGGAAACCTCCAGATACTTGATTTGCGTAGTTCAAAGATCACCGAGGTACCTATTGGGATATATGAGTTCCATGCACTGCATGGTAGAAACCTATTCTTGTCTTTCCAGAATAACTCAACAGAACTGAGAGATCTTCAAGGAGATATAGTGAGAAATTTTGAGGATCATGTACTAGATGAACTGAATTGCGTGGATGATAAGTTGTTCATAACAAAAGATGAGGATGTTATTATTTCTGGATGCAAGTCAGAAGGTATCGGAGCGGTGCATATAAGCTCCATAGAAAGTGGAAAATGCATTACAGACATCAATACCAAGGTTATTGTTTCTGCATTGTCATATAATCCTGAGTTGAATGAGATTTACATTGGGACGGCAAAGGGGAAGGTGCAAGTATGGAGTGCCTGATTCTACACGTTTTTAACCATGTCAATGGCACTGGCAGATCTTGACATTCTACCACATCAGATACTGCAGAAGTTGAAAAGCCCCAATAAAGATAGCTGATCTTGATTGAAAACTTTCTGAATTTCCACGATCGTATCCATGTAAAACTTCAAAAAATGAAATGGATGGCGCTTATTGAGTTGTAGTCCTGATTGAAAACTTTCTGAATTTCTCCACGATCGTATCCATGTAAAACTTCAAACAATGAAATGGATGGCGCTTATTGAGTTGTAGTCGTCCGGTAGCGTTGTTTCTGCTTTGTTCATTCATCAATACTGGGATGTTCAGATTTTTGAGGC]




>consensus_1513#0
TCGCCTCCCCTCCCCTCCCCTCCCCTCCCCTCTTCCCTCTCCGGCAAGGCAGCAACAGTG
CTGCACCACCACCACCGCCACCGCGGCCTCTCCTCCTCCCCGCCGCGCCGCGCCACGCCG
CCATGAACACCAACACTCAAACCGGCGGCGGCAACTCCGCCCCCCGCGATCTCCGCCGGC
CGGCGAGATGGCGGCATGTACGCCCTACCCTCCCCGCCCCGTCGACCGATCCACCTGCTC
CTCGCTCCAGGCCGCTCTGCTCCGCGTTTCTGATCCAGTTCCGGCGGCAAGCCGGAGCGG
CAGCGCATGCGGCGGCCACCTCCACGGCGGAGGGCTCCGCCTCCGTTCTCGTTACGCCGG
CGAGTAGCCCTGCTTTGGGCCGGCCCAACAATTCACGGTTCCGGCCCAACATTGGTAACG
AGCCGAGCTGAGTCCAAGCCGAGCCGCTGTTTTTTTAAGCCTCGCGCGTGCCCGCCTCTG
CTGTTCTTTCTCTCGCCCTCTGCTGCTGTTCCCTTCTCCTTTCTGACACGATCAAGAAAC
GATCAAGAAATCGGCTGCTCCCACTTCTCCTATCTGCGAGAAGAAATCAAGAAACCCTAC
AGAGGAGAGGATCGGGGGGAACAAGATTCCTGAAGCCATGAAACTGAGTCTCATTTCCGA
CGGCGACATCCCCGACAGCCAGGATGATCAAGGCTCCGGTGGAAGAGCGGATGGGCGACA
GGTCCTAGAGAGAGGAGGAGGAGGAGGCAAGAGGAGAAGACGGGTTTTCTTGGAGGAGGA
AGACGAGGACGAGAATGCGATGAAAGTTGATGAAGAAGCCGTGATACTTTCCTGCGCGCG
TGGAGGCCCTGCGGGCGTCTCGACGGCCAAAATTGATGGATGCATCGATAAACAGGATGG
ACAAGGCAGCAGCAAGCAAAGAAAGAAGAGCTGCAGCACGGTTATGAAGCTACAATTTAG
AGAAATCGGATTGCACTGCTCTTTGAGGACATGCGGCATCAGCAGATTCGTACCCACACC
TTCAACATTCTCACATGAGGTCTTCTCCAAGATAAAGAACAATAAGGTCGTATTTGATAT
CTACAGATGTAAGGATGTCATTCGACACTTAGAGAGGCCTATCAGGAAGAGATCTGCAGT
TCTGCAGATTCTTCCATTAAAAGATCTTGTTGCTGTAGTGTTATGCTCTGGTTTGAGCTT
TTTACTCAGCAGAGTAACAAATAAAATGATATCAATCCTCAACAGATATGACGATGAAAT
AATTGTCTCTATATTCTACAACAAGGAGGACAAATCTGTGATTACAACTTCTTCTCGTTT
GTTTGATGGCTGCATGTCTCGTCAGGTCACATCAACCCCACTTGAGTGCATTAGGTCAAA
CAAGCAGAATAATGGTCAGCAGATTTTTGAATCAGAAAATATAAAATAGCCAGATAGTGT
GGACTTTGATGCACCAAATGCAAGAGCATTGATACAACAACGCAGCACCTACCGAGTTTT
TGACTTAAAGGATTATTCTCTGCTGTATCAAATACCTGATGTGAATGTCCATCAAGTTGT
TTTTAGGCCATCATTGTTCCTTATAAAGCTGGAGCAGACACATAATGTCTATCCTTTCAG
GATATTTTGTGCTCAGAACTTTGAAGAAACACACTCGTTTGTGCTTGTTGCTAGCTCGAA
ACGACCTGATATTCAACCTCTACATGACAAGATGATAATAAAGCAGAATTTTGCGAATGA
GAATGGAAACCTCCAGATACTTGATTTGCGTAGTTCAAAGATCACCGAGGTACCTATTGG
GATATATGAGTTCCATGCACTGCATGGTAGAAACCTATTCTTGTCTTTCCAGAATAACTC
AACAGAACTGAGAGATCTTCAAGGAGATATAGTGAGAAATTTTGAGGATCATGTACTAGA
TGAACTGAATTGCGTGGATGATAAGTTGTTCATAACAAAAGATGAGGATGTTATTATTTC
TGGATGCAAGTCAGAAGGTATCGGAGCGGTGCATATAAGCTCCATAGAAAGTGGAAAATG
CATTACAGACATCAATACCAAGGTTATTGTTTCTGCATTGTCATATAATCCTGAGTTGAA
TGAGATTTACATTGGGACGGCAAAGGGGAAGGTGCAAGTATGGAGTGCCTGATTCTACAC
GTTTTTAACCATGTCAATGGCACTGGCAGATCTTGACATTCTACCACATCAGATACTGCA
GAAGTTGAAAAGCCCCAATAAAGATAGCTGATCTTGATTGAAAACTTTCTGAATTTCCAC
GATCGTATCCATGTAAAACTTCAAAAAATGAAATGGATGGCGCTTATTGAGTTGTAGTCC
TGATTGAAAACTTTCTGAATTTCTCCACGATCGTATCCATGTAAAACTTCAAACAATGAA
ATGGATGGCGCTTATTGAGTTGTAGTCGTCCGGTAGCGTTGTTTCTGCTTTGTTCATTCA
TCAATACTGGGATGTTCAGATTTTTGAGGC

consensusID : consensus_1513#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 601
fasta sequence 
                              [GGGNACCNTTTTTNTCCCGAATCCCCCCNNCTGGGNCCNCCGGGGATTGGGGAATTTGGGNNATNTCTGGTGACCATTCCNGGNTGAAGTTGNCAACCAAGGTGGGNTGTTNTTTTNCNGGATCCANCCAAAGGTNCCGGNCGGTGCTATAGCNCCNTGGAAGTGGAAATGCATTCCAGACATCAATACCAAGGTTATTGTTNCTGCCATTGTCATATAATCCTGAGTTGAATGAGATTTTCATTGGGACGGCAAAGGGGAAGGTGCCAAGTATGGAGTGCCCTGATTCTACACGTTTTTAACCATGTCAATGGCACTGGCAGATCTTGACATTCTACCACATCAGATACCGCAGAAGTTGAAAAGCCCCAATAAAGATAGCTGATCCTGATTGAAAACTTTCTGAATTTCCACGATCGTATCCATGTAAAACTTCAAAAAATGAAATGGATGGCGCCTTATTGAGTTGTAGTCCTGATTGAAAACTTTCTGAATTTCTCCATATCGTATCCATGTAAAACTTCAAACAATGAAATGGATGGCGCCTTATTGAGTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTNTGCCGAA]

[-] EMBL AI096170             [GGGNACCNTTTTTNTCCCGAATCCCCCCNNCTGGGNCCNCCGGGGATTGGGGAATTTGGGNNATNTCTGGTGACCATTCCNGGNTGAAGTTGNCAACCAAGGTGGGNTGTTNTTTTNCNGGATCCANCCAAAGGTNCCGGNCGGTGCTATAGCNCCNTGGAAGTGGAAATGCATTCCAGACATCAATACCAAGGTTATTGTTNCTGCCATTGTCATATAATCCTGAGTTGAATGAGATTTTCATTGGGACGGCAAAGGGGAAGGTGCCAAGTATGGAGTGCCCTGATTCTACACGTTTTTAACCATGTCAATGGCACTGGCAGATCTTGACATTCTACCACATCAGATACCGCAGAAGTTGAAAAGCCCCAATAAAGATAGCTGATCCTGATTGAAAACTTTCTGAATTTCCACGATCGTATCCATGTAAAACTTCAAAAAATGAAATGGATGGCGCCTTATTGAGTTGTAGTCCTGATTGAAAACTTTCTGAATTTCTCCATATCGTATCCATGTAAAACTTCAAACAATGAAATGGATGGCGCCTTATTGAGTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTNTGCCGAA]




>consensus_1513#1
GGGNACCNTTTTTNTCCCGAATCCCCCCNNCTGGGNCCNCCGGGGATTGGGGAATTTGGG
NNATNTCTGGTGACCATTCCNGGNTGAAGTTGNCAACCAAGGTGGGNTGTTNTTTTNCNG
GATCCANCCAAAGGTNCCGGNCGGTGCTATAGCNCCNTGGAAGTGGAAATGCATTCCAGA
CATCAATACCAAGGTTATTGTTNCTGCCATTGTCATATAATCCTGAGTTGAATGAGATTT
TCATTGGGACGGCAAAGGGGAAGGTGCCAAGTATGGAGTGCCCTGATTCTACACGTTTTT
AACCATGTCAATGGCACTGGCAGATCTTGACATTCTACCACATCAGATACCGCAGAAGTT
GAAAAGCCCCAATAAAGATAGCTGATCCTGATTGAAAACTTTCTGAATTTCCACGATCGT
ATCCATGTAAAACTTCAAAAAATGAAATGGATGGCGCCTTATTGAGTTGTAGTCCTGATT
GAAAACTTTCTGAATTTCTCCATATCGTATCCATGTAAAACTTCAAACAATGAAATGGAT
GGCGCCTTATTGAGTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTNTGCCGA
A

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1513#0      TCGCCTCCCCTCCCCTCCCCTCCCCTCCCCTCTTCCCTCTCCGGCAAGGCAGCAACAGTG 60
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CTGCACCACCACCACCGCCACCGCGGCCTCTCCTCCTCCCCGCCGCGCCGCGCCACGCCG 120
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CCATGAACACCAACACTCAAACCGGCGGCGGCAACTCCGCCCCCCGCGATCTCCGCCGGC 180
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CGGCGAGATGGCGGCATGTACGCCCTACCCTCCCCGCCCCGTCGACCGATCCACCTGCTC 240
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CTCGCTCCAGGCCGCTCTGCTCCGCGTTTCTGATCCAGTTCCGGCGGCAAGCCGGAGCGG 300
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CAGCGCATGCGGCGGCCACCTCCACGGCGGAGGGCTCCGCCTCCGTTCTCGTTACGCCGG 360
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CGAGTAGCCCTGCTTTGGGCCGGCCCAACAATTCACGGTTCCGGCCCAACATTGGTAACG 420
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      AGCCGAGCTGAGTCCAAGCCGAGCCGCTGTTTTTTTAAGCCTCGCGCGTGCCCGCCTCTG 480
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CTGTTCTTTCTCTCGCCCTCTGCTGCTGTTCCCTTCTCCTTTCTGACACGATCAAGAAAC 540
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      GATCAAGAAATCGGCTGCTCCCACTTCTCCTATCTGCGAGAAGAAATCAAGAAACCCTAC 600
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      AGAGGAGAGGATCGGGGGGAACAAGATTCCTGAAGCCATGAAACTGAGTCTCATTTCCGA 660
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CGGCGACATCCCCGACAGCCAGGATGATCAAGGCTCCGGTGGAAGAGCGGATGGGCGACA 720
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      GGTCCTAGAGAGAGGAGGAGGAGGAGGCAAGAGGAGAAGACGGGTTTTCTTGGAGGAGGA 780
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      AGACGAGGACGAGAATGCGATGAAAGTTGATGAAGAAGCCGTGATACTTTCCTGCGCGCG 840
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      TGGAGGCCCTGCGGGCGTCTCGACGGCCAAAATTGATGGATGCATCGATAAACAGGATGG 900
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      ACAAGGCAGCAGCAAGCAAAGAAAGAAGAGCTGCAGCACGGTTATGAAGCTACAATTTAG 960
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      AGAAATCGGATTGCACTGCTCTTTGAGGACATGCGGCATCAGCAGATTCGTACCCACACC 1020
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      TTCAACATTCTCACATGAGGTCTTCTCCAAGATAAAGAACAATAAGGTCGTATTTGATAT 1080
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CTACAGATGTAAGGATGTCATTCGACACTTAGAGAGGCCTATCAGGAAGAGATCTGCAGT 1140
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      TCTGCAGATTCTTCCATTAAAAGATCTTGTTGCTGTAGTGTTATGCTCTGGTTTGAGCTT 1200
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      TTTACTCAGCAGAGTAACAAATAAAATGATATCAATCCTCAACAGATATGACGATGAAAT 1260
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      AATTGTCTCTATATTCTACAACAAGGAGGACAAATCTGTGATTACAACTTCTTCTCGTTT 1320
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      GTTTGATGGCTGCATGTCTCGTCAGGTCACATCAACCCCACTTGAGTGCATTAGGTCAAA 1380
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      CAAGCAGAATAATGGTCAGCAGATTTTTGAATCAGAAAATATAAAATAGCCAGATAGTGT 1440
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      GGACTTTGATGCACCAAATGCAAGAGCATTGATACAACAACGCAGCACCTACCGAGTTTT 1500
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      TGACTTAAAGGATTATTCTCTGCTGTATCAAATACCTGATGTGAATGTCCATCAAGTTGT 1560
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      TTTTAGGCCATCATTGTTCCTTATAAAGCTGGAGCAGACACATAATGTCTATCCTTTCAG 1620
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      GATATTTTGTGCTCAGAACTTTGAAGAAACACACTCGTTTGTGCTTGTTGCTAGCTCGAA 1680
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      ACGACCTGATATTCAACCTCTACATGACAAGATGATAATAAAGCAGAATTTTGCGAATGA 1740
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      GAATGGAAACCTCCAGATACTTGATTTGCGTAGTTCAAAGATCACCGAGGTACCTATTGG 1800
consensus_1513#1      ------------------------------------------------------------
                                                                                  

consensus_1513#0      GATATATGAGTTCCATGCACTGCATGGTAGAAACCTATTCTTGTCTTTCCAGAATAACTC 1860
consensus_1513#1      --------------------------------GGGNACCNTTTTTNTCCCGAATCCCCCC 28
                                                          *   ** *  * **  *    * *

consensus_1513#0      AACAGAACTGAGAGATCTTCAAGGAGATATAGTGAGAAATTTTGAGGATCATGTACTAGA 1920
consensus_1513#1      NNCTGG-------GNCCNCCGGGGAT------TGGGGAATTTGGGNNATN-----TCTGG 70
                        * *        *  *  *  ***       ** * ***** *   **         * 

consensus_1513#0      TGAACTGAATTGCGTGGATGATAAGTTGTTCATAACAAAAGATGAGGATGTTATTATTTC 1980
consensus_1513#1      TGACC---ATT-CCNGGNTG--AAGTTGNCAACCA----AGGTG-GGNTGTTNTT-TTNC 118
                      *** *   *** *  ** **  ******   *  *    ** ** ** **** ** ** *

consensus_1513#0      TGGATGCAAGTCAGAAGGTATCGGAGCGGTGCATATAAGCTCCATAGAAAGTGGAAAATG 2040
consensus_1513#1      NGGATCCA--NCCAAAGGTNCCGGN-CGGTGC-TATA-GCNCCNTGGAA-GTGGAAA-TG 171
                       **** **   *  *****  ***  ****** **** ** ** * *** ******* **

consensus_1513#0      CATTACAGACATCAATACCAAGGTTATTGTTTCTGC-ATTGTCATATAATCCTGAGTTGA 2099
consensus_1513#1      CATTCCAGACATCAATACCAAGGTTATTGTTNCTGCCATTGTCATATAATCCTGAGTTGA 231
                      **** ************************** **** ***********************

consensus_1513#0      ATGAGATTTACATTGGGACGGCAAAGGGGAAGGTGC-AAGTATGGAGTGCC-TGATTCTA 2157
consensus_1513#1      ATGAGATTTTCATTGGGACGGCAAAGGGGAAGGTGCCAAGTATGGAGTGCCCTGATTCTA 291
                      ********* ************************** ************** ********

consensus_1513#0      CACGTTTTTAACCATGTCAATGGCACTGGCAGATCTTGACATTCTACCACATCAGATACT 2217
consensus_1513#1      CACGTTTTTAACCATGTCAATGGCACTGGCAGATCTTGACATTCTACCACATCAGATACC 351
                      *********************************************************** 

consensus_1513#0      GCAGAAGTTGAAAAGCCCCAATAAAGATAGCTGATCTTGATTGAAAACTTTCTGAATTTC 2277
consensus_1513#1      GCAGAAGTTGAAAAGCCCCAATAAAGATAGCTGATCCTGATTGAAAACTTTCTGAATTTC 411
                      ************************************ ***********************

consensus_1513#0      CACGATCGTATCCATGTAAAACTTCAAAAAATGAAATGGATGGCGC-TTATTGAGTTGTA 2336
consensus_1513#1      CACGATCGTATCCATGTAAAACTTCAAAAAATGAAATGGATGGCGCCTTATTGAGTTGTA 471
                      ********************************************** *************

consensus_1513#0      GTCCTGATTGAAAACTTTCTGAATTTCTCCACGATCGTATCCATGTAAAACTTCAAACAA 2396
consensus_1513#1      GTCCTGATTGAAAACTTTCTGAATTTCTCCAT-ATCGTATCCATGTAAAACTTCAAACAA 530
                      *******************************  ***************************

consensus_1513#0      TGAAATGGATGGCGC-TTATTGAGTTGTAGTCGTCCGGTAGCGTTGTTTCTGCTTTGTTC 2455
consensus_1513#1      TGAAATGGATGGCGCCTTATTGAGTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 590
                      *************** *************          *                    

consensus_1513#0      ATTCATCAATACTGGGATGTTCAGATTTTTGAGGC 2490
consensus_1513#1      ACTNTGCCGAA------------------------ 601
                      * *   *   *


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)