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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15158#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1887 fasta sequence
[TTGCTCGTGCTGCCCCCGAGATCTAACCAAAACCCGCGTCCCATCTCACCTCGCCTCACCTCACCATCCGACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGCGGGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCGAGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGGACGTCCTCATCAACCGCCTCTACCGCGACGATGTCGGGGGAAATATGGTTGATGCATTCAGGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCTGTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATGCTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACTTTGGTGGTGCTTTTGATGAAGATGCTATCAGAAATAACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG-AAGTGCTTCCTTTCT-GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC-GGG-CTTGAAAAAGAAGCTCAACT-CAAGTCCAGGCCTGCAAAGAG-CGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGTGTGTCAAC-TTGACAAGATTTAACTCAGAAAAGACAGTCAGCTTTGTGCCGCCAGACGGTGAATTTGAATTGATGAAATATCGAATCACTGAGGGTGTAAATCTCCCATTCCGGGTTCTACCAACGATTAAGGAATTGGGCCGAACACGCATGGAGATAAATGTTAAAGTTAAGAGTGTTTTTGGTGCTAAGATGTTTGCACTTGGTGTTGTCGTCAAAGTCCCTGTTCCAAAACAAACAGCAAAGACTAGTTTCCAAACCACATCTGGGAAAGCCAAATATAATGCTTCAATTGATTCCCTAGTGTGG-AAGATCAGGAAGTTTCCTGGACAAACTGAGGCAACCATGAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA-TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT-CCCAGGTATTTGGCACGGTTATTT-CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA-TGTATATTACATATGACACCACTTT-TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA-AATTTTCCTGGGTTCTTGTAATCGTTTTGACA-CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA-TTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK102342 [TTGCTCGTGCTGCCCCCGAGATCTAACCAAAACCCGCGTCCCATCTCACCTCGCCTCACCTCACCATCCGACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGCGGGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCGAGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGGACGTCCTCATCAACCGCCTCTACCGCGACGATGTCGGGGGAAATATGGTTGATGCATTCAGGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCTGTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATGCTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACTTTGGTGGTGCTTTTGATGAAGATGCTATCAGAAATAACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACT CAAGTCCAGGCCTGCAAAGAG CGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGTGTGTCAAC TTGACAAGATTTAACTCAGAAAAGACAGTCAGCTTTGTGCCGCCAGACGGTGAATTTGAATTGATGAAATATCGAATCACTGAGGGTGTAAATCTCCCATTCCGGGTTCTACCAACGATTAAGGAATTGGGCCGAACACGCATGGAGATAAATGTTAAAGTTAAGAGTGTTTTTGGTGCTAAGATGTTTGCACTTGGTGTTGTCGTCAAAGTCCCTGTTCCAAAACAAACAGCAAAGACTAGTTTCCAAACCACATCTGGGAAAGCCAAATATAATGCTTCAATTGATTCCCTAGTGTGG AAGATCAGGAAGTTTCCTGGACAAACTGAGGCAACCATGAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGA ]
[+] EMBL AU063368 [ CCTCACCTCACCATCCGACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGCGNGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCGAGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGGACGTCCTCATCAACCGCCTCTACCGCGACGATGTC GGGGAAATATGGTTGATGCATTCAGGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCTGTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATGCTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACTTTGGTGGTGCTTTTGATGAAGAT ]
[+] EMBL AU184252 [ ACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGCGGGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCGAGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGGACGTCCTCATCAACCGCCTCTACCGCGACGATGTCGGGGGAAATATGGTTGATGCATTCAGGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCTGTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATGCTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACTTTGGTGGTGCTTTTGATGAAGATGCTATCAGAAATAAC ]
[+] EMBL AU165860 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTNCCTTACT GGAATGCCTGATCTG AATTGGGATTAAATGACAAGATC GGG CTTGAAAAAG AGCTNCACC CAAG CCAGGCCTGCCAA AG CGGGAA ACCNTT ]
[+] EMBL AU162307 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCTGGGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACT CAAGTCCAGGCCTGCAAAGAGCCGGNAAGACCATTGAGCCTGATGATGTCAC ]
[+] EMBL AU165871 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACTCCAAGTCCAGGCCTGCAAAGAG CGGAAAGNCCATTGAGCCTGATGATGNCACATTCCACCAGTGT ]
[+] EMBL AU165861 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTNCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATCNGGGCCTTGAAAAAG AGCCCCACT CCAGTCCAGGCCTNCAAA ]
[+] EMBL AU165857 [ AACTTTGTTTTAATCTATGAGCTTCTTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGTATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACAAGANGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATGAAAGTGCTTCCTTTCT GGAAT ]
[+] EMBL OSR33931A [ AGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTCCGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGNGAAGAGAGGGTCTTATGTACAAGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACT CAAGTCCAGGCCTGCAAAGAG CGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGTGTGTCAACTTTGACAAGATTTAACTCAGAAAAGACAGTCAG ]
[+] EMBL CF331516 [ aaATGTCTTCTAAAGGGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATG AAGTGCTTCCTTTCT GGAATGCCTGATCTGAAATTGGGATTAAATGACAAGATC GGG CTTGAAAAAGAAGCTCAACT CAAGTCCAGGCCTGCAAAGAG CGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGTGTGTCAAC TTGACAAGATTTAACTCAGAAAAGACAGTCAGCTTTGTGCCGCCAGACGGTGAATTTGAATTGATGAAATATCGAATCACTGAGGGTGTAAATCTCCCATTCCGGTTTCTACCAACGATTAAGGAATTGGGCCGAACACGCATGGATATAAATGTTAAAGTTAAGAGTGTTTTTGGTGCTAAGATGTTTGCACTTGGTGTTGTCGTCAAAGTCCCTGTTCCAAAACAAACAGCAAAGACTAGTTTCCAAACCACATCTGGGAAAGCCAAATATAATGCTTCAATTGATTCCCTA ]
[+] EMBL AU032057 [ ATCTGGGAAANCCAAATATAATGCTNCAATTGATTCCCTAGTGTGG AA ATCAGGAAGTTCCCTGGACAAACTGAGGCAACCATGATTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAANGAAANCATGGAACAGGCCNCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGTCCCCAGGTATTTGGCACGGTTATTTCCAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAA ]
[-] EMBL CF331517 [ AATATAATGCTTCAATTGATTCCCTAGTGTGG AAGATCAGGAAGTTTCCTGGACAAACTGAGGCAACCATTAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACGACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTAATTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACACATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTaaaaaaaa ]
[+] EMBL AU030727 [ AATTGATTCCCTAGTNTGGAAAGATCAGGANNTTTCCTGGACAAACTGAGGCAACCATGANTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTNNCTTGCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU030654 [ GAAGTTTCCTGGACAAACTGAGGCAACCATGAGTNCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU030646 [ GAAGTTTCCTGGACAAACTGAGGCAACCATGAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGAACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU030656 [ AAGTTTCCTGGACAAACTGAGGCAACCATGAGTGCCGAAGTTGAGCTGATTTCTACAATGGGGGAAAAGAAATCATGGNACAGGCCGCCAATTCAGATGGAA TTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAAGGTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BM421761 [ TGATTCCCGAAGTTGA CTGATTTCTACAATGGGGGAAAAGAAATCATGGAACA GCCGCCAATTCAGATGGAATTTCCAGGTTCCTATGTTTACTGCTTCTGGGTTACGAGTTCGGTTCCTTAA GTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCACTGTATATTACATATGACACCACTTTGTTCTTTAAGCTATTACTTTGGCAAAGGGCAGAGCAGAGCAGACACAATTTTCCTGGGTTCTTGTAATCGTTTTGACACCGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATC ATATACATATACTCATT GCAGTTTGTATTGCTTTCTTACNTAAATTGATGGGTGAATTCACTT CAA ]
[+] EMBL AU092948 [ GTGTGGGAGAAGAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGGCTGGATCATATGAGATAAGGTGTTAGCGATGAAGAAAAAAGT CCCAGGTATTTGGCACGGTTATTT CAAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAGCA TGTATATTACATATGACACCACTTT TTCTTNAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACA AATTTTCCTGGGTTCTTGTAATCGTTTTGACA CGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTA TTAAATTGATGGGTGAATTCACTTGCAAAAA ]
consensusID : consensus_15158#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 643 fasta sequence
[AGTNNGGAATCTNCTGTTAATTTCTCTGCACNNATCTGANGCATCNCATGNGCGCCNACAGTTNNCNCTGATNTCCTNAATNGGGTGNANAANAANCCACGNNNACAGGCCNCCNACTCAGATGGAACTCCAGGTTCCTANGTCTACNCGCCTCTGNNCTACCGNNNCNCGGTCCCTTAAAGGTGTTGTGAGNCTGNNCNNTTAAANCNCCGTTGNNTGGGTCCGCTNCNTCANNGNGGCTNNATCANATGNNGATAANGTGNTANCGATGAAGNAAAAANTCCCAGGTATTTGGCACGGNTATTTCCAAGGATTCGCGGAGCCTTCNNACTAGTACGGCGTCATGAATGATCATAAAGCATGTATATTACATATGACACCACTTTTTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACAAATTTTCCTGGGTTCTTGTAATCGTTTTGACACGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTATTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU030655 [AGTNNGGAATCTNCTGTTAATTTCTCTGCACNNATCTGANGCATCNCATGNGCGCCNACAGTTNNCNCTGATNTCCTNAATNGGGTGNANAANAANCCACGNNNACAGGCCNCCNACTCAGATGGAACTCCAGGTTCCTANGTCTACNCGCCTCTGNNCTACCGNNNCNCGGTCCCTTAAAGGTGTTGTGAGNCTGNNCNNTTAAANCNCCGTTGNNTGGGTCCGCTNCNTCANNGNGGCTNNATCANATGNNGATAANGTGNTANCGATGAAGNAAAAANTCCCAGGTATTTGGCACGGNTATTTCCAAGGATTCGCGGAGCCTTCNNACTAGTACGGCGTCATGAATGATCATAAAGCATGTATATTACATATGACACCACTTTTTCTTTAAGCTATTACTTTGGCAAAGGGTAGAGCAGAGCAGACAAATTTTCCTGGGTTCTTGTAATCGTTTTGACACGGGATATCTAGTATCCCCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTATTAAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15158#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 199 fasta sequence
[GGAATCGCAAGTGTGTTCCGTGGGTGTCCGTTGGTAAGTCGCTNTTTGACACACTCGGGAGTAGTCTACGGTATGTCCCCCGTGAGGTCGTTGCTTTTGTGTGGTAGGGCAGTAGTGTGTGTCAGTGTGTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCATATACATATACTCATTGGCAGTTAAAAA]
[+] EMBL BQ908616 [GGAATCGCAAGTGTGTTCCGTGGGTGTCCGTTGGTAAGTCGCTNTTTGACACACTCGGGAGTAGTCTACGGTATGTCCCCCGTGAGGTCGTTGCTTTTGTGTGGTAGGGCAGTAGTGTGTGTCAGTGTGTGTATATGAGAAGATGGCGGTAGCGTTTGTTCTTGTTGATCATATACATATACTCATTGGCAGTTAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15158#0 TTGCTCGTGCTGCCCCCGAGATCTAACCAAAACCCGCGTCCCATCTCACCTCGCCTCACC 60
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 TCACCATCCGACGAGCCCCCGGATCACCGGCTCCGACCTGTCGCCGGCGGAGAGCGCCGC 120
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 GGGATCCAGGCGTTGAGGTTGGGGAGCGGGGTGTGTGTGCCAGGCGCTCGGGCGGGGGCG 180
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 AGCGGGCGGCGACGATGCCGGTGGCGGCGTCGGCCATCTACTTCCTCAACCTCCGAGGGG 240
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 ACGTCCTCATCAACCGCCTCTACCGCGACGATGTCGGGGGAAATATGGTTGATGCATTCA 300
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 GGATGCACATTATGCAAACAAAAGAACTGGGTACATGCCCTGTTCGGCAAATAGGAGGCT 360
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 GTTCATTCCTTTACATGAGGATTAGTAATGTCTATATTGTGATCGTGGTTAGCAGCAATG 420
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 CTAATGTTGCTTGTGCTTTCAAGTTTGTCGTGGAGGCAGTGGCTCTTTTCAAGTCATACT 480
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 TTGGTGGTGCTTTTGATGAAGATGCTATCAGAAATAACTTTGTTTTAATCTATGAGCTTC 540
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 TTGATGAAATTATGGACTTCGGTTACCCTCAAAACCTCTCACCTGAAATCTTAAAATTGT 600
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 ATATAACTCAAGAAGGAGTTCGGTCGCCATTTTCCTCCAAGCCTTCAGATAAGCCTGTTC 660
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 CGAATGCCACTCTACAAGTTACTGGTGCTGTTGGTTGGAGAAGAGAGGGTCTTATGTACA 720
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 AGAAGAACGAGGTTTTCTTGGACATTGTTGAAAGTGTAAATCTTCTTATGTCTTCTAAAG 780
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 GGAGTGTTCTACGATGTGATGTGACTGGGAAGATTCTTATGAAGTGCTTCCTTTCTGGAA 840
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 TGCCTGATCTGAAATTGGGATTAAATGACAAGATCGGGCTTGAAAAAGAAGCTCAACTCA 900
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 AGTCCAGGCCTGCAAAGAGCGGAAAGACCATTGAGCTTGATGATGTCACATTCCACCAGT 960
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 GTGTCAACTTGACAAGATTTAACTCAGAAAAGACAGTCAGCTTTGTGCCGCCAGACGGTG 1020
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 AATTTGAATTGATGAAATATCGAATCACTGAGGGTGTAAATCTCCCATTCCGGGTTCTAC 1080
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 CAACGATTAAGGAATTGGGCCGAACACGCATGGAGATAAATGTTAAAGTTAAGAGTGTTT 1140
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 TTGGTGCTAAGATGTTTGCACTTGGTGTTGTCGTCAAAGTCCCTGTTCCAAAACAAACAG 1200
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 CAAAGACTAGTTTCCAAACCACATCTGGGAAAGCCAAATATAATGCTTCAATTGATTCCC 1260
consensus_15158#1 ------------------------------------------------------------
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 TAGTGTGGAAGATCAGG--AAGTTTCCTGGACAAA-CTGAGGCAACC-ATGAGTGCCGA- 1315
consensus_15158#1 -AGTNNGGAATCTNCTGTTAATTTCTCTGCACNNATCTGANGCATCNCATGNGCGCCNAC 59
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 AGTTGA-GCTGATTTCTACAATGGGG--GAAAAGAAATCATGGAA-CAGGCCGCCAATTC 1371
consensus_15158#1 AGTTNNCNCTGATNTCCTNAATNGGGTGNANAANAANCCACGNNNACAGGCCNCCNACTC 119
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 AGATGGAATTCCAGGTTCCTATGTTTACT-GCTTCTGGGTTAC--GAGTTCGGTTCCTTA 1428
consensus_15158#1 AGATGGAACTCCAGGTTCCTANGTCTACNCGCCTCTGNNCTACCGNNNCNCGGTCCCTTA 179
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 A-GGTGTGGGAGAA--GAGCGGTTACAACACCGTTGAGTGGGTTCGCTACATCACAAGGG 1485
consensus_15158#1 AAGGTGTTGTGAGNCTGNNCNNTTAAANCNCCGTTGNNTGGGTCCGCTNCNTCANNGNGG 239
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 CTGGATCATATGAG-ATAAGGTGTTAGCGATGAAGAAAAAAGTCCCAGGTATTTGGCACG 1544
consensus_15158#1 CTNNATCANATGNNGATAANGTGNTANCGATGAAGNAAAAANTCCCAGGTATTTGGCACG 299
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 GTTATTTC-AAGGATTCGCGGAGCTTTCTTTCTAGTACGGCGTCATGAATGATCATAAAG 1603
consensus_15158#1 GNTATTTCCAAGGATTCGCGGAGCCTTCNNACTAGTACGGCGTCATGAATGATCATAAAG 359
consensus_15158#2 ------------------------------------------------------------
consensus_15158#0 CATGTATATTACATATGACACCACTTTTTCTTTAAGCTATTACTTTGGCAAAGGGTAGAG 1663
consensus_15158#1 CATGTATATTACATATGACACCACTTTTTCTTTAAGCTATTACTTTGGCAAAGGGTAGAG 419
consensus_15158#2 ------------------------GGAATCGCAAGTGTGTTCCGTGGGTGTCCGTTGGTA 36
** * * ** * * ** * * *
consensus_15158#0 CAGAGCAGACAAATTTTCCTGGGTTCTTGTAATCGTTTTGACACGGGATATCTAGTATCC 1723
consensus_15158#1 CAGAGCAGACAAATTTTCCTGGGTTCTTGTAATCGTTTTGACACGGGATATCTAGTATCC 479
consensus_15158#2 AGTCGCTNTTTGACACACTCGGGAG-TAGTCTACGGTATGTCCCCCGTGAGGTCGTTGCT 95
** * * *** * ** ** * ** * * * * * ** *
consensus_15158#0 CCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAG 1783
consensus_15158#1 CCTGAGTCTTGTTTGTGTGGTAGGGCATATTTTCATTTGTATATGAGAAGATGGCGGTAG 539
consensus_15158#2 TTTGTGT---GGTAGGGCAGTAGTGTGTGTCAGTGTGTGTATATGAGAAGATGGCGGTAG 152
** ** * * * * **** * * * * ***********************
consensus_15158#0 CGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTATT 1843
consensus_15158#1 CGTTTGTTCTTGTTGATCAATATACATATACTCATTGGCAGTTTGTATTGCTTTCTTATT 599
consensus_15158#2 CGTTTGTTCTTGTTGATCA-TATACATATACTCATTGGCAGTTAAAAA------------ 199
******************* *********************** *
consensus_15158#0 AAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA 1887
consensus_15158#1 AAATTGATGGGTGAATTCACTTGCAAAAAAAAAAAAAAAAAAAA 643
consensus_15158#2 --------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||