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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15160#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1799 fasta sequence
[TCCTCTCCTCGCGGCTCGACGCGAGACCCAGCCACCCGCCGCCGGCTGCGTCTCCCTTCTTCTCACCCACCGTCGCGGCGGCGGAGCGAGGGGGACGAGGCGGGGGACAGCACAAGGCAGGCAAGATTCGAGAGGCCGGCGGAGCCAAGCGGAGGGCGCCAGCCTCGTCGTCGTCGTCTTCTTCCGCCGCGCGGCCCGGCCGCTGCCGGCGCAGGGAGGCGCCCCCGCCGCCGCCGCCGCCACCGCCACCGCCTCCGCGGGGGGAGATGGGGGTCGACTACTACAAGGTCCTCGGCGTCGACCGCGGCGCCGGGGACGACGACCTCAAGAAGGCCTACCACAAGCTCGCCATGCGGTGGCACCCCGACAAGAACCCCACCAACAACAAGAAGGAGGCCGAGGCCAAGTTCAAGCAGATCTCCGAGGCCTACGAGGTCCTTAGTGATCCCCAGAAACGCACAATCTATGATCAGGTAGGGGAAGAAGGGCTCAAGGGGCAGCCGCCCCCTGGTGCGGGAGGTCCTGGAGCATCTCCCTTCTACCCTGGTGGTGCCCATTCCAACTCTTTTCACTTCAACCCAAGGAGTGCAGACGACATTTTTGCCGAGTTCTTTGGATTCCGTGGTCCTTTCTCTAGCATGGGTGGCATGCCAAGTGTAAGTGGAGGCATGAGAGGGGACCCAAGGTTCCCAGGGTTTGGCAATGAATATTTCTCTTCACGCTTTGGTGGTGAGGGTTCCACCAGTATGCATCAGCCGTCACACCAACTAGCGAAACCTCCGCCCATTGAGAACCGGCTTCCAGTCAGCCTTGCAGATCTGTACAAGGGTGTAACAAAAAAGATGAAGATCTCAAGAGAGATTATAGACTTCAACGGGAGAGTTTCACAGCAGGAGGAAATTTTGCAGATAGAAGTAAAGCCAGGTTGGAAGAGGGGGACAAAGATCACTTTTGAAGAGAAGGGGAATCAAGCTCCAAACATGAAACCTGCTGATATTGTTTTCATAATTGAGGAGAAGCCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTTATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACACTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAGGTGGTCCCTGGAGAAGGCATGCCTAATCCAAAAGGGCCCAATAAGAAGGGAGATCTGAAGATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTCAAAAGGCTCTTGGGTTCTTGAGCCTGTTTGAACGAATTTCGTAAAAGTGACTGTGAATATTGGCGGTACCTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACA-AAAGGCAAGAAGTTAGAAA-AAAGAAA-GATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATC-CCCA-TAATTT-ACTG-ATG-GTTTGACATGTGCTATACCATGCTATGGCTTTTTGATTGCTCTTCCTCTTGGCTACCTGCGGGTTGCAGGGTACACACAACTACACAAGGTGAGGCTCCATTTGGAACCTGTTTTTTTTCTTTAAAATGTATTTCTTGAGGCATTACTGCTTCCATATGAATCCTGTAAAATCATGCATTGCAAGTAGGCACCGCTCTTGAGTCTGGCAAGGGTTATGCCTCCTTTGAATCGCAGGCTGTTTTTAGAATTTTTATAGAAATATGTTGATTTCCCATATGAATCCAGGGGAAAAAATTGTGCGCTCCAAA]
[+] EMBL CB646531 [TCCTCTCCTCGCGGCTCGACGCGAGACCCAGCCACCCGCCGCCGGCTGCGTCTCCCTTCTTCTCACCCACCGTCGCGGCGGCGGAGCGAGGGGGACGAGGCGGGGGACAGCACAAGGCAGGCAAGATTCGAGAGGCCGGCGGAGCCAAGCGGAGGGCGCCAGCCTCGTCGTCGTCGTCTTCTTCCGCCGCGCGGCCCGGCCGCTGCCGGCGCAGGGAGGCGCCCCCGCCGCCGCCGCCGCCACCGCCACCGCCTCCGCGGGGGGAGATGGGGGTCGACTACTACAAGGTCCTCGGCGTCGACCGCGGCGCCGGGGACGACGACCTCAAGAAGGCCTACCACAAGCTCGCCATGCGGTGGCACCCCGACAAGAACCCCACCAACAACAAGAAGGAGGCCGAGGCCAAGTTCAAGCAGATCTCCGAGGCCTACGAGGTCCTTAGTGATCCCCAGAAACGCACAATCTATGATCAGGTAGGGGAAGAAGGGCTCAAGGGGCAGCCGCCCCCTGGTGCGGGAGGTCCTGGAGCATCTCCCTTCTACCCTGGTGGTGCCCATTCCAACTCTTTTCACTTCAACCCAAGGAGTGCAGACGACATTTTTGCCGAGTTCTTTGGATTCCGTGGTCCTTTCTCTAGCATGGGTGGCATGCCAAGTGTAAGTGGAGGCATGAGAGGGGACCCAAGGTTCCCAGGGTTTGGCAATG ]
[+] EMBL CB658100 [ CTCCTCGCGGCTCGACGCGAGACCCAGCCACCCGCCGCCGGCTGCGTCTCCCTTCTTCTCACCCACCGTCGCGGCGGCGGAGCGAGGGGGACGAGGCGGGGGACAGCACAAGGCAGGCAAGATTCGAGAGGCCGGCGGAGCCAAGCGGAGGGCGCCAGCCTCGTCGTCGTCGTCTTCTTCCGCCGCGCGGCCCGGCCGCTGCCGGCGCAGGGAGGCGCCCCCGCCGCCGCCGCCGCCACCGCCACCGCCTCCGCGGGGGGAGATGGGGGTCGACTACTACAAGGTCCTCGGCGTCGACCGCGGCGCCGGGGACGACGACCTCAAGAAGGCCTACCACAAGCTCGCCATGCGGTGGCACCCCGACAAGAACCCCACCAACAACAAGAAGGAGGCCGAGGCCAAGTTCAAGCAGATCTCCGAGGCCTACGAGGTCCTTAGTGATCCCCAGAAACGCACAATCTATGATCAGGTAGGGGAAGAAGGGCTCAAGGGGCAGCCGCCCCCTGGTGCGGGAGGTCCTGGAGCATCTCCCTTCTACCCTGGTGGTGCCCATTCCAACTCTTTTCACTTCAACCCAAGGAGTGCAGACGACATTTTTGCCGAGTTCTTTGGATTCCGTGGTCCTTTCTCTAGCATGGGTGGCATGCCAAGTGTAAGTGGAGGCATGAGAGGGGACCCAAGGTTCCCAGGGTTTGGCAATGAATATTTCTCTTCACGCTTTGGTGGTGAGGGTTCCACCAGTATGCATCAGCCG ]
[+] EMBL CB662345 [ GCGGCTCGACGCGAGACCCAGCCACCCGCCGCCGGCTGCGTCTCCCTTCTTCTCACCCACCGTCGCGGCGGCGGAGCGAGGGGGACGAGGCGGGGGACAGCACAAGGCAGGCAAGATTCGAGAGGCCGGCGGAGCCAAGCGGAGGGCGCCAGCCTCGTCGTCGTCGTCTTCTTCCGCCGCGCGGCCCGGCCGCTGCCGGCGCAGGGAGGCGCCCCCGCCGCCGCCGCCGCCACCGCCACCGCCTCCGCGGGGGGAGATGGGGGTCGACTACTACAAGGTCCTCGGCGTCGACCGCGGCGCCGGGGACGACGACCTCAAGAAGGCCTACCACAAGCTCGCCATGCGGTGGCACCCCGACAAGAACCCCACCAACAACAAGAAGGAGGCCGAGGCCAAGTTCAAGCAGATCTCCGAGGCCTACGAGGTCCTTAGTGATCCCCAGAAACGCACAATCTATGATCAGGTAGGGGAAGAAGGGCTCAAGGGGCAGCCGCCCCCTGGTGCGGGAGGTCCTGGAGCATCTCCCTTCTACCCTGGTGGTGCCCATTCCAACTCTTTTCACTTCAACCCAAGGAGTGCAGACGACATTTTTGCCGAGTTCTTTGGATTCCGTGGTCCTTTCTCTAGCATGGGTGGCATGCCAAGTGTAAGTGGAGGCATGAGAGGGGACCCAAGGTTCCCAGGGTTTGGCAATGAATATTTCTCTTCACGCTTTGGTGGTGAGGGTTCCACCAGTATGCATCAGCCGTCACACCAACTAGCGAAACCTCCGCCCATTGAGAACCGGCTTCCAGTCAGCC ]
[+] EMBL CB653264 [ CGGCTCGACGCGAGACCCAGCCACCCGCCGCCGGCTGCGTCTCCCTTCTTCTCACCCACCGTCGCGGCGGCGGAGCGAGGGGGACGAGGCGGGGGACAGCACAAGGCAGGCAAGATTCGAGAGGCCGGCGGAGCCAAGCGGAGGGCGCCAGCCTCGTCGTCGTCGTCTTCTTCCGCCGCGCGGCCCGGCCGCTGCCGGCGCAGGGAGGCGCCCCCGCCGCCGCCGCCGCCACCGCCACCGCCTCCGCGGGGGGAGATGGGGGTCGACTACTACAAGGTCCTCGGCGTCGACCGCGGCGCCGGGGACGACGACCTCAAGAAGGCCTACCACAAGCTCGCCATGCGGTGGCACCCCGACAAGAACCCCACCAACAACAAGAAGGAGGCCGAGGCCAAGTTCAAGCAGATCTCCGAGGCCTACGAGGTCCTTAGTGATCCCCAGAAACGCACAATCTATGATCAGGTAGGGGAAGAAGGGCTCAAGGGGCAGCCGCCCCCTGGTGCGGGAGGTCCTGGAGCATCTCCCTTCTACCCTGGTGGTGCCCATTCCAACTCTTTTCACTTCAACCCAAGGAGTGCAGACGACATTTTTGCCGAGTTCTTTGGATTCCGTGGTCCTTTCTCTAGCATGGGTGGCATGCCAAGTGTAAGTGGAGGCATGAGAGGGGACCCAAGGTTCCCAGGG ]
[+] EMBL C28701 [ TACAAGGTCCTCGGCGTCGACCGCGGCGCCGGGGACGACGACCTCAAGAAGGCCTACCACAAGCTCGCCATGCGGTGGCACCCCGACAAGAACCCCACCAACAACAAGAAGGAGGCCGAGGCCAAGTTCAAGCAGATCTCCGAGGCCTACGAGGTCCTTAGTGATCCCCAGAAACGCACAATCTATGATCAGGTAGGGGAAGAAGGGCTCAAGGGGCAGCCG CCCCTGGTGCGGGAGGTCCTGGAGCATCTCCCTTCTACCCTGGTGGTGCCCATTCCAACTCTTTTCACTTCAACCCAAGGAGTGCAGACGACATTTTTGCCGAGTTCTTTGGATTCCGTGGTCCTTTCTCTAGCATGGGTGGCATGCCAAGTGTAAGTGGAGGCATGAGAGGGGACCCAAGGGTCCCAGGGTTTGGCAATGAATATTTCTCTTCACGCTTTGGTGGTGAGGGTTCCACCAGTATGCATCA CCGTCACACCAACTAGCGAAACCTC ]
[-] EMBL CB662344 [ GACCCAAGGTTCCCAGGGTTTGGCAATGAATATTTCTCTTCACGCTTTGGTGGTGAGGGTTCCACCAGTATGCATCAGCCGTCACACCAACTAGCGAAACCTCCGCCCATTGAGAACCGGCTTCCAGTCAGCCTTGCAGATCTGTACAAGGGTGTAACAAAAAAGATGAAGATCTCAAGAGAGATTATAGACTTCAACGGGAGAGTTTCACAGCAGGAGGAAATTTTGCAGATAGAAGTAAAGCCAGGTTGGAAGAGGGGGACAAAGATCACTTTTGAAGAGAAGGGGAATCAAGCTCCAAACATGAAACCTGCTGATATTGTTTTCATAATTGAGGAGAAGCCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTTATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACACTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAGGTGGTCCCTGGAGAAGGCATGCCTAATCCAAAAGGGCCCAATAAGAAGGGAGATCTGAAGATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTCAAAAGGCTCTTGGGTTCTTGAGCCTGTTTGAACGAATTTCGTAAAAGTGACTGTGAATATTGGCGGTACCTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACA AAAGGCAAGAAGTTAGAAA AAAGAAA GATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATC CCCA TAATTT ACTG ATG GTTTGACATGTGCTATACCATGCTATGGC ]
[-] EMBL CB662347 [ TATTTCTCTTCACGCTGTGGTGGTGAGGGTTCCACCAGTATGCATCAGCCGTCACACCAACTAGCGAAACCTCCGCCCATTGAGAACCGGCTTCCAGTCAGCCTTGCAGATCTGTACAAGGGTGTAACAAAAAAGATGAAGATCTCAAGAGAGATTATAGACTTCAACGGGAGAGTTTCACAGCAGGAGGAAATTTTGCAGATAGAAGTAAAGCCAGGTTGGAAGAGGGGGACAAAGATCACTTTTGAAGAGAAGGGGAATCAAGCTCCAAACATGAAACCTGTTGATATTGTTTTCATAATTGAGGAGAAGCCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTTATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACACTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAGGTGGTCCCTGGAGAAGGCATGCCTAATCCAAAAGGGCCCAATAAGAAGGGAGATCTGAAGATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTCAAAAGGCTCTTGGGTTCTTGAGCCTGTTTGAACGAATTTAGTAAAAGTGACTGTGAATATTGGCGGTACCTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACA AAAGGCAAGAAGTTAGAAA AAAGAAA GATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATCTCCCACTAATTTAACTGAAAGAGGTGAACATGTGCTATACCATGTTATGGCTTTTTGA ]
[-] EMBL CB662343 [ ACCAGTATGCATCAGCCGTCACACCAACTAGCGAAACCTCCGCCCATTGAGAACCGGCTTCCAGTCAGCCTTGCAGATCTGTACAAGGGTGTAACAAAAAAGATGAAGATCTCAAGAGAGATTATAGACTTCAACGGGAGAGTTTCACAGCAGGAGGAAATTTTGCAGATAGAAGTAAAGCCAGGTTGGAAGAGGGGGACAAAGATCACTTTTGAAGAGAAGGGGAATCAAGCTCCAAACATGAAACCTGCTGATATTGTTTTCATAATTGAGGAGAAGCCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTTATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACACTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAGGTGGTCCCTGGAGAAGGCATGCCTAATCCAAAAGGGCCCAATAAGAAGGGAGATCTGAAGATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTCAAAAGGCTCTTGGGTTCTTGAGCCTGTTTGAACGAATTTCGTAAAAGTGACTGTGAATATTGGCGGTACCTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACA AAAGGCAAGAAGTTAGAAA AAAGAAA GATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATC CCCA TAATTT ACTG ATA GTTTGACATGTGCTATACCATGCTATGGCTTTTTG ]
[-] EMBL CB662346 [ GTATGCATCAGCCGTCACACCAACTAGCGAAACCTCCGCCCATTGAGAACCGGCTTCCAGTCAGCCTTGCAGATCTGTACAAGGGTGTAACAAAAAAGATGAAGATCTCAAGAGAGATTATAGACTTCAACGGGAGAGTTTCACAGCAGGAGGAAATTTTGCAGATAGAAGTAAAGCCAGGTTGGAAGAGGGGGACAAAGATCACTTTTGAAGAGAAGGGGAATCAAGCTCCAAACATGAAACCTGCTGATATTGTTTTCATAATTGAGGAGAAGCCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTTATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACACTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAGGTGGTCCCTGGAGAAGGCATGCCTAATCCAAAAGGGCCCAATAAGAAGGGAGATCTGAAGATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTCAAAAGGCTCTTGGGTTCTTGAGCCTGTTTGAACGAATTTCGTAAAAGTGACTGTGAATATTGGCGGTACCTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACA AAAGGCAAGAAGTTAGAAA AAAGAAA GATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATC CCCA TAATTT ACTG ATG GTTTGACATGTGCTATACCATGCTATGGC ]
[-] EMBL CB646532 [ CAGCCGTCACACCAACTAGCGAAACCTCCGCCCATTGAGAACCGGCTTCCAGTCAGCCTTGCAGATCTGTACAAGGGTGTAACAAAAAAGATGAAGATCTCAAGAGAGATTATAGACTTCAACGGGAGAGTTTCACAGCAGGAGGAAATTTTGCAGATAGAAGTAAAGCCAGGTTGGAAGAGGGGGACAAAGATCACTTTTGAAGAGAAGGGGAATCAAGCTCCAAACATGAAACCTGCTGATATTGTTTTCATAATTGAGGAGAAGCCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTTATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACACTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAGGTGGTCCCTGGAGAAGGCATGCCTAATCCAAAAGGGCCCAATAAGAAGGGAGATCTGAAGATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTCAAAAGGCTCTTGGGTTCTTGAGCCTGTTTGAACGAATTTCGTAAAAGTGACTGTGAATATTGGCGGTACCTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACA AAAGGCAAGAAGTTAGAAA AAAGAAA GATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATC CCCA TAATTT ACTG ATG GTTTGACATGTG ]
[-] EMBL CB653265 [ AGCCGTCACACCAACTAGCGAAACCTCCGCCCATTGAGAACCGGCTTCCAGTCAGCCTTGCAGATCTGTACAAGGGTGTAACAAAAAAGATGAAGATCTCAAGAGAGATTATAGACTTCAACGGGAGAGTTTCACAGCAGGAGGAAATTTTGCAGATAGAAGTAAAGCCAGGTTGGAAGAGGGGGACAAAGATCACTTTTGAAGAGAAGGGGAATCAAGCTCCAAACATGAAACCTGCTGATATTGTTTTCATAATTGAGGAGAAGCCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTTATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACACTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAGGTGGTCCCTGGAGAAGGCATGCCTAATCCAAAAGGGCCCAATAAGAAGGGAGATCTGAAGATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTCAAAAGGCTCTTGGGTTCTTGAGCCTGTTTGAACGAATTTCGTAAAAGTGACTGTGAATATTGGCGGTACCTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACA AAAGGCAAGAAGTTAGAAA AAAGAAA GATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATC CCCA TAATTT ACTG ]
[-] EMBL CB662348 [ GGCTTCCAGTCAGCCTTGCAGATCTGTACAAGGGTGTAACAAAAAAGATGAAGATCTCAAGAGAGATTATAGACTTCAACGGGAGAGTTTCACAGCAGGAGGAAATTTTGCAGATAGAAGTAAAGCCAGGTTGGAAGAGGGGGACAAAGATCACTTTTGAAGAGAAGGGGAATCAAGCTCCAAACATGAAACCTGCTGATATTGTTTTCATAATTGAGGAGAAGCCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTTATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACACTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAGGTGGTCCCTGGAGAAGGCATGCCTAATCCAAAAGGGCCCAATAAGAAGGGAGATCTGAAGATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTCAAAAGGCTCTTGGGTTCTTGAGCCTGTTTGAACGAATTTAGTAAAAGTGACTGTGAATATTGGCGGTACCTAGCGAGGTAGATTTCTATTGGTTGTGGGGGACA AAAGGCAAGAAGTTAGAAA AAAGAAAGGATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATA CCCACTAATTT ACTG ATG GTTTGACATGTGCTATACCATGCTATGGC ]
[+] EMBL BI813076 [ AGAGAAGGGGAATCAAGCTCC AACATGAAACCT CTGATATTGTTTTCATAATTGAGGAGAA CCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTTATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACACTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAGGTGGTCCCTGGAGAAGGCATGCCTAATCC AAAGGGCCC ATAAGAAGGGAGATCTGAAGATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTTAAAAGGCTCTTGGGTTCTTGAGCCTGTTTGAACGAATTTCCT AAAGTGACTGTGAATATTGGCGGTACCTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACA AAAGGCAAGAAGTTAGAAA AAAGAAA GATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATC CCCA TAATTT CCCC ATG GTTTGACATGTGCTAaaaaaa ]
[+] EMBL BM038389 [ tccgTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACACAAAGGCAAGAAGTTAGAAATAAAGAAA GATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATC CCCA TAATTT ACTG ATG GTTTGACATGTGCTATACCATGCTATGGCTTTTTGATTGCTCTTCCTCTTGGCTACCTGCGGGTTGCAGGGTACACACAACTACACAAGGTGAGGCTCCATTTGGAACCTGTTTTTTTTCTTTAAAATGTATTTCTTGAGGCATTACTGCTTCCATATGAATCCTGTAAAATCATGCATTGCAAGTAGGCACCGCTCTTGAGTCTGGCAAGGGTTATGCCTCCTTTGAATCGCAGGCTGTTTTTAGAATTTTTATAGAAATATGTTGATTTCCCATATGAATCCAGGGGAAAAAATTGTGCGCTCCAAA]
consensusID : consensus_15160#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1524 fasta sequence
[ATCCTCCATCACCCACCGCATCTCCGCTCCTCGACCGCGAGAGAGGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGTTGCGAGATTCATCAGGCAGGCGCAGGAGAGGAGAGGAGAGGAGAGGAGATTCATTATGGGGGTGGACTACTACAAGCTGCTGCAGGTGGAGCGGGGCGCCACCGAGGAGGAGCTGAAGAAGGCGTACCGGAAGC-TGGCCATGAAGTGGCACCCGGACAAGAACCCCAACAGCAAGAAGGAGGCCGAGGCCAAGTTCAAGCAGATCTCCGAGGCCTACGAGGTGCTAAGTGATTCCCAGAAACGAGCAGTCTATGACCAGTACGGAGAAGAGGGGCTCAAAGGGCAGGTGCCACCTCCTGGAGCAGGTGGGCCTGGTGGGTCTTCATACTATGGGGGTGATGGGTCGACGTTCCGGTTCAACCCTCGAAGCGCGGATGATATATTTGCTGAGTTCTTCGGATTTTCCAGCCCATTCTCAAGCATGGGTGGCATGGGTGGT---------ATGGGTGGAGGTGTTGACAGGGGCATGCGGGGATCAAAGTTTGGGATGTATGACAATGATATATTTGGGTCCTTCTCTCAGTTCCCTGGTGAGGCATCAATGCATGCTCCCCAACGGCCCCAGAAGGCTGCACCAATTGAGAACCGACTGCCTTGCAATCTAGCTGACTTGTACAAAGGCACCACCAAGAAGATGAAAATTTCACGGGAAATATTAGATTCTAGCGGGAGAACCATGGTTGTTGAGGAGATCCTAACAATCGACATAAAACCTGGATGGAAGAAAGGGACAAAAATTACTTTTCCTGAAAAGGGTAACGAGTCTCCGCATGT-ATTCCTGCGGATATTGTATTCGTGATTGATGAGAAACCACATGATCTGTTTACACGAGAGGGGAATGATCTCGTCATGACACAGAAGATTTCCTTGGCTGAGGCCTTGACAGGATGTACAGTTCAGGTAACAGCACTAGATGGTCGGAACCTAACAGTACCAATCAATAATGTCGTCTACCCTGGCTACGAGGAGGTTGTTCTCCGAGAGGGCATGCCAATTCCGAAGGATCCATCAAAGAAGGGAAATCTTAGGATCAAGTTCAACATCAAATTCCCCTCAAGGCTGACGTCTGAGCAGAAATCAGAAATTAAGAGGCTACTAGCTTCTTGAGGAACACAATATACCGTTAGGTTGTCTGGTTTTTTGGGTGCACTGGGGAGACCAATCAGATGTTAAGCTGGGAAATGTGAATACCATCCAAAGACTCATTTTTTGTGGGTTCTGGTTATTCCACCTTTGTAACTTAAAATTGTCAATTTTGGCAGAATAATTCATCAAAATAGATAATTCTGTGTCAACATGCCGTGCTTATGTGTGCCATCTCCTACTGAGCAGAGGCTATCAAAATGAAGCCGCAGTTCCAAACTCTGTTTTTTTTTCTTTTTTGTACTGGACTGCAGAGGGTACCCCTGGTTATATTTTGAGTATTTCTCGTCCTTGCTG]
[+] EMBL C71904 [ATCCTCCATCACCCACCGCATCTCCGCTCCTCGACCGCNAGANAGGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGTTGCGAGATTCATCAGGCAGGCGCAGGAGAGGAGAGGAGAGGAGAGGAGATTCATTATGGGGGTGGACTACTACAAGCTGCTGCAGGTGGAGCGGGGCGCCACCGAGGAGGAGCTGAAGAAGGCGTACCGGAAGCTTGGCCATGAAGTTGCACC ]
[+] EMBL AK100011 [ CGCTCCTCGACCGCGAGAGAGGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGTTGCGAGATTCATCAGGCAGGCGCAGGAGAGGAGAGGAGAGGAGAGGAGATTCATTATGGGGGTGGACTACTACAAGCTGCTGCAGGTGGAGCGGGGCGCCACCGAGGAGGAGCTGAAGAAGGCGTACCGGAAGC TGGCCATGAAGTGGCACCCGGACAAGAACCCCAACAGCAAGAAGGAGGCCGAGGCCAAGTTCAAGCAGATCTCCGAGGCCTACGAGGTGCTAAGTGATTCCCAGAAACGAGCAGTCTATGACCAGTACGGAGAAGAGGGGCTCAAAGGGCAGGTGCCACCTCCTGGAGCAGGTGGGCCTGGTGGGTCTTCATACTATGGGGGTGATGGGTCGACGTTCCGGTTCAACCCTCGAAGCGCGGATGATATATTTGCTGAGTTCTTCGGATTTTCCAGCCCATTCTCAAGCATGGGTGGCATGGGTGGT ATGGGTGGAGGTGTTGACAGGGGCATGCGGGGATCAAAGTTTGGGATGTATGACAATGATATATTTGGGTCCTTCTCTCAGTTCCCTGGTGAGGCATCAATGCATGCTCCCCAACGGCCCCAGAAGGCTGCACCAATTGAGAACCGACTGCCTTGCAATCTAGCTGACTTGTACAAAGGCACCACCAAGAAGATGAAAATTTCACGGGAAATATTAGATTCTAGCGGGAGAACCATGGTTGTTGAGGAGATCCTAACAATCGACATAAAACCTGGATGGAAGAAAGGGACAAAAATTACTTTTCCTGAAAAGGGTAACGAGTCTCCGCATGT ATTCCTGCGGATATTGTATTCGTGATTGATGAGAAACCACATGATCTGTTTACACGAGAGGGGAATGATCTCGTCATGACACAGAAGATTTCCTTGGCTGAGGCCTTGACAGGATGTACAGTTCAGGTAACAGCACTAGATGGTCGGAACCTAACAGTACCAATCAATAATGTCGTCTACCCTGGCTACGAGGAGGTTGTTCTCCGAGAGGGCATGCCAATTCCGAAGGATCCATCAAAGAAGGGAAATCTTAGGATCAAGTTCAACATCAAATTCCCCTCAAGGCTGACGTCTGAGCAGAAATCAGAAATTAAGAGGCTACTAGCTTCTTGAGGAACACAATATACCGTTAGGTTGTCTGGTTTTTTGGGTGCACTGGGGAGACCAATCAGATGTTAAGCTGGGAAATGTGAATACCATCCAAAGACTCATTTTTTGTGGGTTCTGGTTATTCCACCTTTGTAACTTAAAATTGTCAATTTTGGCAGAATAATTCATCAAAATAGATA ]
[+] EMBL AK070441 [ GCTCCTCGACCGCGAGAGAGGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGTTGCGAGATTCATCAGGCAGGCGCAGGAGAGGAGAGGAGAGGAGAGGAGATTCATTATGGGGGTGGACTACTACAAGCTGCTGCAGGTGGAGCGGGGCGCCACCGAGGAGGAGCTGAAGAAGGCGTACCGGAAGC TGGCCATGAAGTGGCACCCGGACAAGAACCCCAACAGCAAGAAGGAGGCCGAGGCCAAGTTCAAGCAGATCTCCGAGGCCTACGAGGTGCTAAGTGATTCCCAGAAACGAGCAGTCTATGACCAGTACGGAGAAGAGGGGCTCAAAGGGCAGGTGCCACCTCCTGGAGCAGGTGGGCCTGGTGGGTCTTCATACTATGGGGGTGATGGGTCGACGTTCCGGTTCAACCCTCGAAGCGCGGATGATATATTTGCTGAGTTCTTCGGATTTTCCAGCCCATTCTCAAGCATGGGTGGCATGGGTGGT ATGGGTGGAGGTGTTGACAGGGGCATGCGGGGATCAAAGTTTGGGATGTATGACAATGATATATTTGGGTCCTTCTCTCAGTTCCCTGGTGAGGCATCAATGCATGCTCCCCAACGGCCCCAGAAGGCTGCACCAATTGAGAACCGACTGCCTTGCAATCTAGCTGACTTGTACAAAGGCACCACCAAGAAGATGAAAATTTCACGGGAAATATTAGATTCTAGCGGGAGAACCATGGTTGTTGAGGAGATCCTAACAATCGACATAAAACCTGGATGGAAGAAAGGGACAAAAATTACTTTTCCTGAAAAGGGTAACGAGTCTCCGCATGTGATTCCTGCGGATATTGTATTCGTGATTGATGAGAAACCACATGATCTGTTTACACGAGAGGGGAATGATCTCGTCATGACACAGAAGATTTCCTTGGCTGAGGCCTTGACAGGATGTACAGTTCAGGTAACAGCACTAGATGGTCGGAACCTAACAGTACCAATCAATAATGTCGTCTACCCTGGCTACGAGGAGGTTGTTCTCCGAGAGGGCATGCCAATTCCGAAGGATCCATCAAAGAAGGGAAATCTTAGGATCAAGTTCAACATCAAATTCCCCTCAAGGCTGACGTCTGAGCAGAAATCAGAAATTAAGAGGCTACTAGCTTCTTGAGGAACACAATATACCGTTAGGTTGTCTGGTTTTTTGGGTGCACTGGGGAGACCAATCAGATGTTAAGCTGGGAAATGTGAATACCATCCAAAGACTCATTTTTTGTGGGTTCTGGTTATTCCACCTTTGTAACTTAAAATTGTCAATTTTGGCAGAATAATTCATCAAAATAGATAATTCTGTGTCAACATGCCGTGCTTATGTGTGCCATCTCCTACTGAGCAGAGGCTATCAAAATGAAGCCGCAGTTCCAAACTCTGTTTTTTTTTCTTTTTTGTACTGGACTGCAGAGGGTACCCCTGGTTATATTTTGAGTATTTCTCGTCCTTGCTG]
[+] EMBL AF140490 [ AGGGGCTCAAAGGGCAGGTGCCACCTCCTGGAGCAGGTGGGCCTGGTGGGTCTTCATACTATGGGGGTGATGGGTCGACGTTCCGGTTCAACCCTCGAAGCGCGGATGATATATTTGCTGAGTTCTTCGGATTTTCCAGCCCATTCTCAAGCATGGGTGGCATGGGTGGTATGGGTGGCATGGGTGGAGGTGTCGACAGGGGCATGCGGGGATCAAAGTTTGGGATGTATGACAATGATATATTTGGGTCCTTCTCTCAGTTCCCTGGTGAGGCATCAATGCATGCTCCCCAACGGCCCCAGAAGGCTGCACCAATTGAGAACCGACTGCCTTGCAATCTA ]
consensusID : consensus_15160#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1295 fasta sequence
[TAGTAGTAGTTGGGCATGAGCGTCGGGGGAGATGGGGATGGATTACTACAACGTGCTGAAGGTGAACCGGAACGCGACGGAGGAGGATCTCAAGAAGTCGTACCGGCGGATGGCGATGAAGTGGCACCCCGACAAGAACCCCGGCGACAAGAAGAAGGAGGCCGAGGCCAAGTTCAAGAAGATCTCCGAGGCCTACGAGGTTTTGAGTGATCCACAGAAGAGGGCAATATATGATAAATATGGAGAGGAGGGTCTGAAGGCCTCTGTGGATGCAGGGGCTTCATCATCCATGAATGGCAACCGCCGGTTCAATCCTCGGAACGCTGAAGATGTATTCGCCGAGTTCTTTGGCAGCAGCAAGCCCTTTGAGGGAATGGGGCGCGCAAAGTCAATGAGGTTCCAGACAGAAGGTGCTGGCACTTTTGGTGGATTTGGTGGTGGGAATGAGAACAAGTTCAGATCATACAATGATTCAGCCGGCACCAGTTCAAGCCAGCCCCGGAAGCCACCAGCCGTGGAGACAAAATTGCCTTGCACACTGGAAGAGCTATATGCTGGTTCGACGCGAAAGATGAAGATATCCAGGAACGTTGTCAGGCCTACTGGCCAAATAGGAACTGAATCAGAGATTCTAACTATCGATATAAAGCCCGGATGGAAGAAAGGAACCAAGATTACGTTCCCGGACAAGGGGAATGAGCAGCCAAACCAGCTCCCTGCTGACCTTGTATTTGTAATAGATGAAAAGCCCCATGATCTGTACACAAGAGAAGGTAATGATCTCCTTGTGCACCAGAAGATTGAATTGGTGGATGCGTTAGCAGGAACCACCGTTAATCTGAAGACTCTCGATGGCCGGGACCTGGTGATCAAGCTCACTGATGTGGTCACACCTGGGTACGAGCTCGCGATCGCAAAGGAAGGGATGCCTATTGTCAAGGAGAATGGGAGGAGAGGCAATTTAAGGATCAAGTTCGACATCGTTTTCCCCAAGAGGTTATCGTCAGATCAGCGGCAGAACATTAGGAAGGTTCTTGGAGGGCAAACTCAGCAGCAGTGAGCACATTTTCAGAAGCAAATCGACTGTGCCATAGTTCTTGAGATAAACAGACTAATTCAGAGCTCTTGTTCTTCTTCTCCAGTTGGCTTGTACACATAGTTATTTTTCATTTGGAGTTGTTCATCTTTGATCTGCCCCCCTTCTTGGAAAAATAGCAATGTTAATTGATGACCACTACACGTGTAAGCAAAAACACATATCATTACACTTGAAATACAGAGTGCAATGCAATGTA]
[+] EMBL CB667410 [TAGTAGTAGTTGGGCATGAGCGTCGGGGGAGATGGGGATGGATTACTACAACGTGCTGAAGGTGAACCGGAACGCGACGGAGGAGGATCTCAAGAAGTCGTACCGGCGGATGGCGATGAAGTGGCACCCCGACAAGAACCCCGGCGACAAGAAGAAGGAGGCCGAGGCCAAGTTCAAGAAGATCTCCGAGGCCTACGAGGTTTTGAGTGATCCACAGAAGAGGGCAATATATGATAAATATGGAGAGGAGGGTCTGAAGGCCTCTGTGGATGCAGGGGCTTCATCATCCATGAATGGCAACCGCCGGTTCAATCCTCGGAACGCTGAAGATGTATTCGCCGAGTTCTTTGGCAGCAGCAAGCCCTTTGAGGGAATGGGGCGCGCAAAGTCAATGAGGTTCCAGACAGAAGGTGCTGGCACTTTTGGTGGATTTGGTGGTGGGAATGAGAACAAGTTCAGATCATACAATGATTCAGCCGGCACCAGTTCAAGCCAGCCCCGGAAGCCACCAGCCGTGGAGACAAAATTGCCTTGCACACTGGAAGAGCTATATGCTGGTTCGACGCGAAAGATGAAGATATCCAGGAACGTTGTCAGGCCTACTGGCCAAATAGGAACTGAATCAGAGATTCTAACTATCGATATAAAGCCCGGATGGAAGAAAGGAACCAAGATTACGTTCCCGGACAAGGGGAATGAGCAGCCAAACCAGCTCCCTGCTGACCTTGTATTTGTAATAGATGAAAAGCCCCATGATCTGTACACAAGAGAAGGTAATGATCTCCTTGTGCACCAGAAGATTGAA ]
[-] EMBL CB667411 [ CTTGCACACTGGAAGAGCTATATGCTGGTTCGACGCGAAAGATGAAGATATCCAGGAACGTTGTCAGGCCTACTGGCCAAATAGGAACTGAATCAGAGATTCTAACTATCGATATAAAGCCCGGATGGAAGAAAGGAACCAAGATTACGTTCCCGGACAAGGGGAATGAGCAGCCAAACCAGCTCCCTGCTGACCTTGTATTTGTAATAGATGAAAAGCCCCATGATCTGTACACAAGAGAAGGTAATGATCTCCTTGTGCACCAGAAGATTGAATTGGTGGATGCGTTAGCAGGAACCACCGTTAATCTGAAGACTCTCGATGGCCGGGACCTGGTGATCAAGCTCACTGATGTGGTCACACCTGGGTACGAGCTCGCGATCGCAAAGGAAGGGATGCCTATTGTCAAGGAGAATGGGAGGAGAGGCAATTTAAGGATCAAGTTCGACATCGTTTTCCCCAAGAGGTTATCGTCAGATCAGCGGCAGAACATTAGGAAGGTTCTTGGAGGGCAAACTCAGCAGCAGTGAGCACATTTTCAGAAGCAAATCGACTGTGCCATAGTTCTTGAGATAAACAGACTAATTCAGAGCTCTTGTTCTTCTTCTCCAGTTGGCTTGTACACATAGTTATTTTTCATTTGGAGTTGTTCATCTTTGATCTGCCCCCCTTCTTGGAAAAATAGCAATGTTAATTGATGACCACTACACGTGTAAGCAAAAACACATATCATTACACTTGAAATACAGAGTGCAATGCAATGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15160#1 ------------------------------------------------------------
consensus_15160#2 ------------------------------------------------------------
consensus_15160#0 TCCTCTCCTCGCGGCTCGACGCGAGACCCAGCCACCCGCCGCCGGCTGCGTCTCCCTTCT 60
consensus_15160#1 ------------------------------------------------------------
consensus_15160#2 ------------------------------------------------------------
consensus_15160#0 TCTCACCCACCGTCGCGGCGGCGGAGCGAGGGGGACGAGGCGGGGGACAGCACAAGGCAG 120
consensus_15160#1 -------------ATCCTCCATCACCCACCGCATCTCCGCTCCTCGACCGCGAGAGAGGA 47
consensus_15160#2 ------------------------------------------------------------
consensus_15160#0 GCAAGATTCGAGAGGCCGGCGGAGCCAAGCGGAGGGCGCCAGCCTCGTCGTCGTCGTCTT 180
consensus_15160#1 GAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCGTTGCGAGATTCATCAGGCAGG 107
consensus_15160#2 --------------------------------------------------------TAGT 4
consensus_15160#0 CTTCCGCCGCGCGGCCCGGCCGCTGCCGGCGCAGGGAGGCGCCCCCGCCGCCGCCGCCGC 240
*
consensus_15160#1 CGCAGGAGAGGAGAGGAGAGGAGAGGAGATTCATTATGGGGGTGGACTACTACAAGCTGC 167
consensus_15160#2 AGTAGTTGGGCATGAGCGTCGGGGGAG--------ATGGGGATGGATTACTACAACGTGC 56
consensus_15160#0 CACCGCC-ACCGCCTCCGCGGGGGGAG--------ATGGGGGTCGACTACTACAAGGTCC 291
* * * * * ****** * ** ******** * *
consensus_15160#1 TGCAGGTGGAGCGGGGCGCCACCGAGGAGGAGCTGAAGAAGGCGTACCGGAAGCTGGCCA 227
consensus_15160#2 TGAAGGTGAACCGGAACGCGACGGAGGAGGATCTCAAGAAGTCGTACCGGCGGATGGCGA 116
consensus_15160#0 TCGGCGTCGACCGCGGCGCCGGGGACGACGACCTCAAGAAGGCCTACCACAAGCTCGCCA 351
* ** * ** *** ** ** ** ** ****** * **** * * ** *
consensus_15160#1 TGAAGTGGCACCCGGACAAGAACCCCAACAGCAAGA---AGGAGGCCGAGGCCAAGTTCA 284
consensus_15160#2 TGAAGTGGCACCCCGACAAGAACCCCGGCGACAAGAAGAAGGAGGCCGAGGCCAAGTTCA 176
consensus_15160#0 TGCGGTGGCACCCCGACAAGAACCCCACCAACAACAAGAAGGAGGCCGAGGCCAAGTTCA 411
** ********* ************ * *** * *********************
consensus_15160#1 AGCAGATCTCCGAGGCCTACGAGGTGCTAAGTGATTCCCAGAAACGAGCAGTCTATGACC 344
consensus_15160#2 AGAAGATCTCCGAGGCCTACGAGGTTTTGAGTGATCCACAGAAGAGGGCAATATATGATA 236
consensus_15160#0 AGCAGATCTCCGAGGCCTACGAGGTCCTTAGTGATCCCCAGAAACGCACAATCTATGATC 471
** ********************** * ****** * ***** * ** * *****
consensus_15160#1 AGTACGGAGAAGAGGGGCTCAAAGGGCAGGTGCCACCTCCTGGAGCAGGTGGGCCTGGTG 404
consensus_15160#2 AATATGGAGAGGAGGGTCTGAAGG-----------CCTCT--------GTGGA--TGCAG 275
consensus_15160#0 AGGTAGGGGAAGAAGGGCTCAAGGGGCAG---CCGCCCCCTGGTGCGGGAGGTCCTGGAG 528
* ** ** ** ** ** ** * ** * * ** ** *
consensus_15160#1 GGTCTTCATACTATGGGGGTGATGGG----TCGACG--TTCCGGTTCAACCCTCGAAGCG 458
consensus_15160#2 GGGCTTCATCATCCATGAATGGCAA-----CCG-------CCGGTTCAATCCTCGGAACG 323
consensus_15160#0 CATCTCCCTTCTACCCTGGTGGTGCCCATTCCAACTCTTTTCACTTCAACCCAAGGAGTG 588
** * * * ** * * ***** ** * * *
consensus_15160#1 CGGATGATATATTTGCTGAGTTCTTCGGATTTTCCAGCCCATTCTCAAGCATGGGTGGCA 518
consensus_15160#2 CTGAAGATGTATTCGCCGAGTTCTTTGGCAGCAGCAAGCCCTTTGAGGGAATGGGGCGCG 383
consensus_15160#0 CAGACGACATTTTTGCCGAGTTCTTTGGATTCCGTGGTCCTTTCTCTAGCATGGGTGGCA 648
* ** ** * ** ** ******** ** ** ** * ***** **
consensus_15160#1 TGGGTGGTATGGGTGGAGGTGTTGACAGGGGCATGCGGGGATCAAAGTTTGGGATGTATG 578
consensus_15160#2 CAAA----GTCAATGAGGTTCCAGACAGAAG-GTGCTGGCACT----TTTGGTGGATTTG 434
consensus_15160#0 TGCCAAGTGTAAGTGGAGGCAT-GAGAGGGG-ACCCAAGG-------TTCCCAGGGTTTG 699
* ** * ** ** * * * ** * **
consensus_15160#1 ACAATGATATATTTGGGTCCTTCTCTCAGTTCCCTGG--TGAGGCATCAATGCATGCTC- 635
consensus_15160#2 GTGGTGGGAA---TGAGAACAAGTTCAGATCATACAA--TGATTCAGCCGGCACCAGTT- 488
consensus_15160#0 GCAATGA-ATATTTCTCTTCACGCTTTGGTGGTGAGGGTTCCACCAGTATGCATCAGCCG 758
** * * * * * **
consensus_15160#1 -CCCAACGGCCCCAGAAGGCTGCACCAATTGAGAACCGACTGCCTTGCAATCTAGCTGAC 694
consensus_15160#2 -CAAGCCAGCCCCGGAAGCCACCAGCCGTGGAGACAAAATTGCCTTGCACACTGGAAGAG 547
consensus_15160#0 TCACACCAACTAGCGAAACCTCCGCCCATTGAGAACCGGCTTCCAGTCAGCCTTGCAGAT 818
* * * *** * * * * **** * ** ** ** * **
consensus_15160#1 TTGTACAAAGGCACCACCAAGAAGATGAAAATTTCACGGGAAATATTAGATTCTAGCGGG 754
consensus_15160#2 CTATATGCTGGTTCGACGCGAAAGATGAAGATATCCAGGAACGTTGTCAGGCCTACTGGC 607
consensus_15160#0 CTGTACAAGGGTGTAACAAAAAAGATGAAGATCTCAAGAGAGATTATAGACTTCAACGGG 878
* ** ** ** ******** ** ** * * * * * **
consensus_15160#1 AGAACCATGGTTGTTGAGGAGATCCTAACAATCGACATAAAACCTGGATGGAAGAAAGGG 814
consensus_15160#2 CAAATAGGAACTGAATCAGAGATTCTAACTATCGATATAAAGCCCGGATGGAAGAAAGGA 667
consensus_15160#0 AGAGTTTCACAGCAGGAGGAAATTTTGCAGATAGAAGTAAAGCCAGGTTGGAAGAGGGGG 938
* ** ** * ** ** **** ** ** ******* **
consensus_15160#1 ACAAAAATTACTTTTCCTGAAAAGGGTAACGAGTCTCCGCATGTATTCC-TGCGGATATT 873
consensus_15160#2 ACCAAGATTACGTTCCCGGACAAGGGGAATGAGCAGCCAAACCAGCTCCCTGCTGACCTT 727
consensus_15160#0 ACAAAGATCACTTTTGAAGAGAAGGGGAATCAAGCTCCAAACATGAAACCTGCTGATATT 998
** ** ** ** ** ** ***** ** * ** * * *** ** **
consensus_15160#1 GTATTCGTGATTGATGAGAAACCACATGATCTGTTTACACGAGAGGGGAATGATCTCGTC 933
consensus_15160#2 GTATTTGTAATAGATGAAAAGCCCCATGATCTGTACACAAGAGAAGGTAATGATCTCCTT 787
consensus_15160#0 GTTTTCATAATTGAGGAGAAGCCCCATGACATTTTCACCAGGGAGGGAAATGATCTTGTT 1058
** ** * ** ** ** ** ** ***** * * ** * ** ** ******** *
consensus_15160#1 ATGACACAGAAGATTTCCTTGGCTGAGGCCTTGACAGGATGTACAGTTCAGGTAACAGCA 993
consensus_15160#2 GTGCACCAGAAGATTGAATTGGTGGATGCGTTAGCAGGAACCACCGTTAATCTGAAGACT 847
consensus_15160#0 ATAACGGAGAAAATATCTTTGGTGGAAGCGCTTACTGGGTATACTGCACGTATCATTACA 1118
* **** ** **** ** ** * * ** ** * * * *
consensus_15160#1 CTAGATGGTCGGAACCTAACAGTACCAATCAATAATGTCGTCTACCCTGGCTACGAGGAG 1053
consensus_15160#2 CTCGATGGCCGGGACCTGGTGATCAAGCTCACTGATGTGGTCACACCTGGGTACGAGCTC 907
consensus_15160#0 CTTGATGCGCGAAGTCTGTCAGTGCCCATTAATTCAGTCATCCATCCTGACTATGTGGAG 1178
** **** ** ** * * * * ** ** **** ** * *
consensus_15160#1 GTTGTTCTCCGAGAGGGCATGCCAATTCCGAAGGATCCATCAAAGAAGGGAAATCTTAGG 1113
consensus_15160#2 GCGATCGCAAAGGAAGGGATGCCTATTGTCAAGGAGAATGGGAGGAGAGGCAATTTAAGG 967
consensus_15160#0 GTGGTCCCTGGAGAAGGCATGCCTAATCCAAAAGGGCCCAATAAGAAGGGAGATCTGAAG 1238
* * ** ** ***** * * ** * * ** ** ** * * *
consensus_15160#1 ATCAAGTTCAACATCAAATTCCCCTCAAGGCTGACGTCTGAGCAGAAATCAGAAATTAAG 1173
consensus_15160#2 ATCAAGTTCGACATCGTTTTCCCCAAGAGGTTATCGTCAGATCAGCGGCAGAACATTAGG 1027
consensus_15160#0 ATTAAATTCAACATCAGGTTCCCTTCCAGGTTGACATCTGATCAAAAAGCAGGGTTCAAA 1298
** ** *** ***** ***** *** * * ** ** ** * *
consensus_15160#1 AGGCTACTAGCTTCTTGAG-------GAACACAATATACCGTTAGGTTGTCTGGTTTTTT 1226
consensus_15160#2 A-------AGGTTCTTGGA-------GGGCA-AACTCAGCAGCAGTGAGCACATTTTCAG 1072
consensus_15160#0 AGGCTCTTGGGTTCTTGAGCCTGTTTGAACG-AATTTCGTAAAAGTGACTGTGAATATTG 1357
* * ****** * * ** ** *
consensus_15160#1 GGGTGCACTGGGGAGAC------CAATCAGATGTTAAGCTGGGAAATG-------TGAAT 1273
consensus_15160#2 AAGCAAATCGACTGTGC------CA--TAGTTCTTGAGATAAACAGAC-------TAATT 1117
consensus_15160#0 GCGGTACCTAGCGAGGTAGATTTCTATTGGTTCTGGGGGACAAAAGGCAAGAAGTTAGAA 1417
* * * * * * * *
consensus_15160#1 ACCA--TCCAAAGACTCATTTTTTGTGGGTT-CTGGTTATTCCACCTTTGTAACTTAAAA 1330
consensus_15160#2 CAGAGCTCTTGTTCTTCTTCTCCAGTTGGCT-TGTACACATAGTTATTTTTCATTTGGAG 1176
consensus_15160#0 AAAAGAAAGATGATTTCATAACATATCAGTAATAGGTTGTTATGTTGTTTTTTATCCCCA 1477
* ** * * * * ** * *
consensus_15160#1 TTGT-CAATTTTGGCAGAATAATTCATCAAAATAGATAATTCTGTGTCAACATGCCGTGC 1389
consensus_15160#2 TTGTTCATCTTTGATCTGCCCCCCTTCTTGGAAAAATAG--CAATGTTAATTGATGACCA 1234
consensus_15160#0 TAATTTACTGATGGTTTGACA-TGTGCTATACCATGCTATGGCTTTTTGATTGCTCTTCC 1536
* * * ** * * * *
consensus_15160#1 TTATGTGTGCCATCTCCT-ACTGAGCAGAGGCTATCAAAATGAAGCCGCAGTTCCAAACT 1448
consensus_15160#2 CTACACGTGTAAGCAA------AAACACATATCATTACACTTGAAATACAGAGTGCAATG 1288
consensus_15160#0 TCTTGGCTACCTGCGGGTTGCAGGGTACACACAACTACAC--AAGGTGAGGCTCCATTTG 1594
* * * * * * * * *
consensus_15160#1 CTGTTTTTTTTTCTTTTTTGTACTGGACTGCAGAGGGTACCCCTGGTTATATTTTGAGTA 1508
consensus_15160#2 CAATGTA----------------------------------------------------- 1295
consensus_15160#0 GAACCTGTTTTTTTTCTTTAAAATGTATTTCTTGAGGCATTACTGCTTCCATATGAATCC 1654
*
consensus_15160#1 TTTCTCGTCCTTGCTG-------------------------------------------- 1524
consensus_15160#2 ------------------------------------------------------------
consensus_15160#0 TGTAAAATCATGCATTGCAAGTAGGCACCGCTCTTGAGTCTGGCAAGGGTTATGCCTCCT 1714
consensus_15160#1 ------------------------------------------------------------
consensus_15160#2 ------------------------------------------------------------
consensus_15160#0 TTGAATCGCAGGCTGTTTTTAGAATTTTTATAGAAATATGTTGATTTCCCATATGAATCC 1774
consensus_15160#1 -------------------------
consensus_15160#2 -------------------------
consensus_15160#0 AGGGGAAAAAATTGTGCGCTCCAAA 1799
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||