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Oryza sativa
cluster # 15196 cluster # 15196       Sequences # 20       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15196#0 length = 613 sequences # 14  
consensus_15196#1 length = 549 sequences # 6  

consensusID : consensus_15196#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 613
fasta sequence
                              [TAGGTGCAGAGAGAAACCTCCCTCCCTCCACTCTCTCTCTCTCTCTCTCTAACCCACACGCTTGTGCTTTGTGCAAGTAGCACCAGTTCATTGGGACATATGAAGAAGGAAGAGGAGGATGCCAATGCCACCATCTCCTTCAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAAATATATGACTATATATATGTATAAAGTCACCT]

[+] EMBL AK063130             [TAGGTGCAGAGAGAAACCTCCCTCCCTCCACTCTCTCTCTCTCTCTCTCTAACCCACACGCTTGTGCTTTGTGCAAGTAGCACCAGTTCATTGGGACATATGAAGAAGGAAGAGGAGGATGCCAATGCCACCATCTCCTTCAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCATATATATGACTATATATATGTATAAAGTCACCT]
[+] EMBL CF340399             [                                                                                                                           gagtagaaaATCTCCTTCAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF340688             [                                                                                                                                            CAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF338730             [                                                                                                                                            CAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF339968             [                                                                                                                                            CAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF340147             [                                                                                                                                            CAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF340261             [                                                                                                                                            CAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF340340             [                                                                                                                                            CAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF340531             [                                                                                                                                            CAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF339690             [                                                                                                                                            CAACCTGCCTTCCCTTCCT ACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF340120             [                                                                                                                                            CAACCTGCCTTCCCTTCC NACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF338665             [                                                                                                                                            CAACCTGCCTTCCCTTCC NACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF338420             [                                                                                                                                            CAACCTGCCTTCCCTTCC NACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]
[+] EMBL CF339218             [                                                                                                                                            CAACCTGCCTTCCCTTCC NACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAA                                ]


>consensus_15196#0 TAGGTGCAGAGAGAAACCTCCCTCCCTCCACTCTCTCTCTCTCTCTCTCTAACCCACACG CTTGTGCTTTGTGCAAGTAGCACCAGTTCATTGGGACATATGAAGAAGGAAGAGGAGGAT GCCAATGCCACCATCTCCTTCAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTC CTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGT CGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAG CTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATC ATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTC TCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGC TGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATT GGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAAATATATGACTATATATATG TATAAAGTCACCT



consensusID : consensus_15196#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 549
fasta sequence
                              [CTCTAACCCACACGCTTGTGCTTTGTGCAAGTAGCACCAGTTCATTGGGACATATGAAGAAGGAAGAGGAGGATGCCAATGCCACCATCTCCTTCAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCATATAAAAAAAAAAAA]

[+] EMBL CA756798             [CTCTAACCCACACGCTTGTGCTTTGTGCAAGTAGCACCAGTTCATTGGGACATATGAAGAAGGAAGAGGAGGATGCCAATGCCACCATCTCCTTCAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCATATAAAAAAAAAAAA]
[+] EMBL CF339205             [                                                                                              CAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCTATTTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTGCCATGGTACTGATCATATGATGGTATGCAGGAA                                                                                                                                                                                                                        ]
[+] EMBL CF339310             [                                                                                              CAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGG                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF339322             [                                                                                               AACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAG                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF338546             [                                                                                               tACCTGCCTTCCCTTCCTNACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATTGGTCTTATCACCAGAAATTGAG                                 ]
[+] EMBL CF339105             [                                                                                              ctACCTGCCTTCCCTTCCT ACCATGCTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGCTGCTTTAATTAACTTGCTGAGACTGTCTTTTAGCTCGATTGATTATGATGTAAGGCCATTGG                                                     ]


>consensus_15196#1 CTCTAACCCACACGCTTGTGCTTTGTGCAAGTAGCACCAGTTCATTGGGACATATGAAGA AGGAAGAGGAGGATGCCAATGCCACCATCTCCTTCAACCTGCCTTCCCTTCCTCACCATG CTTCCCTGCTCCTCCTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCC GCCGCCGCCGCCGTCGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCG CCATGCGAGCTTAGCTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTT CCATGGTACTGATCATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAAT TAATTCAAATCCTCTCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCT GTTGCCGTTCTTGCTGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTAT GATGTAAGGCCATTGGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCATATAAA AAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15196#0      TAGGTGCAGAGAGAAACCTCCCTCCCTCCACTCTCTCTCTCTCTCTCTCTAACCCACACG 60
consensus_15196#1      ----------------------------------------------CTCTAACCCACACG 14
                                                                     **************

consensus_15196#0      CTTGTGCTTTGTGCAAGTAGCACCAGTTCATTGGGACATATGAAGAAGGAAGAGGAGGAT 120
consensus_15196#1      CTTGTGCTTTGTGCAAGTAGCACCAGTTCATTGGGACATATGAAGAAGGAAGAGGAGGAT 74
                       ************************************************************

consensus_15196#0      GCCAATGCCACCATCTCCTTCAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTC 180
consensus_15196#1      GCCAATGCCACCATCTCCTTCAACCTGCCTTCCCTTCCTCACCATGCTTCCCTGCTCCTC 134
                       ************************************************************

consensus_15196#0      CTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGT 240
consensus_15196#1      CTCGTCTCCGGGAGGCCATTCCGGTGACCTCGTCGTCGCCGCCGCCGCCGCCGCCGCCGT 194
                       ************************************************************

consensus_15196#0      CGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAG 300
consensus_15196#1      CGTCTTCTCTCAGTAGTTCTTCTGCAGAGCCAAGGCATGGAGGCCGCCATGCGAGCTTAG 254
                       ************************************************************

consensus_15196#0      CTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATC 360
consensus_15196#1      CTCAACAAAATGGAGGAGATCGAGTTTTGGTGAAGAAGAAACCGTTCCATGGTACTGATC 314
                       ************************************************************

consensus_15196#0      ATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTC 420
consensus_15196#1      ATATGATGGTATGCAGGAAGGCCAGGCATTTTTTCTCTCTCTGAATTAATTCAAATCCTC 374
                       ************************************************************

consensus_15196#0      TCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGC 480
consensus_15196#1      TCTTTTTTCTTTCTTTTTCTTTTCTGCTTTCCTCTCCTTGGCACCTGTTGCCGTTCTTGC 434
                       ************************************************************

consensus_15196#0      TGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATT 540
consensus_15196#1      TGCTTTAATTAGCTTGCTGAGACTGTCTTTTAGCTCGTTTGATTATGATGTAAGGCCATT 494
                       ************************************************************

consensus_15196#0      GGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCAAATATATGACTATATATATG 600
consensus_15196#1      GGTCTTATCACCAGAAATTGAGATGGTCCTGAAGATTTCATATAAAAAAAAAAAA----- 549
                       **************************************** *** *  *  * *      

consensus_15196#0      TATAAAGTCACCT 613
consensus_15196#1      -------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)