These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1520#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3079 fasta sequence [AGCATAATCCTTAGCAACGCAGTTACAGAGGAAACCAAGCACCAGCTCCCACAGGCAGGCCTGCCTACATCCAGTCCAGCCGCTCACAAGTTTCTGAACTCATGAAGGAATGTGTTCCAACAGCAAAAGGGACACCTAGTGAGCATTAATACCAACAAGAACAACTCGGTAAAGGAACTGTGGTCTTGAGTATTTTGGACTAGTACTTGACAAATGTTCATCACACAATAAGAATAAATACAGCGAGTTGGGCCTTCTGTCTGGTTGTCTGAGAAGGGTTGAAGTAATTTGAAAGCTGTCTAAAAATTCACCCAAACAGAGAACTTCGGACAAGCGGCTCTATAGTAGTCTAACCCTAACCTCTCTCACCAATGAATGGCAGCAACAGCCTCAGCCCAGTTCCTCATTGTGCGAGGCTCCCCTGGCTGCACTGCCCGACTGGTCTTTCTCCAGGCTGCTCTAGATCTGGACTGGCGCACAGTGAGGCACAGGATGATCGATTGTGGCTCCAGATCAGGTGGCCCAACCATGGGAGGCCAGCTAGCACATCGGTGGCTTGTGGTAGACCTGCCAGCGAGTTAGCTTCCACAATGGCTGTGGTGGGGAACCAGCACATGGGCTTCAAGGTGAAGGAAAAGATCGAAGACAGGGTTGAAAGTGAAAAGATTGGTTAAAGGAGACACCTACAAACCGCGTGTTGAAGTGATGAAATGATAATGCATAGCGGTCCATGATTGAAAACCAATCGGGGTTCATTGAATAGAGAAACCCTGCTCTGTCATATGAGGAAGTTGCTTCGACGCTTACATGATCAGTGTACAGTGATCGTGGCTTTCAAATTGTGACAGAATTGAGTGGTACAAAACAGATAAATCCCTGTGTACACATTAAGCTTGATTGCATAGGTGATGCAACAGCAGTAATCTTTGATGCCCAGACAGATGTGAGAGTGGAAACAGGAAGTCAGATGGCCATGTGATATCAAGAGGAAAGCTGGATACATATACACAGTGCCCTTTCTTTGGACTGGCTTGCTCTACTCAAAGGAGGTAATTTCGCACAAAAGGCAACAGCAGAGATGGTTCACATCAGAGCACTGATAACCAGCCAATCATGAAGTTGTACCTTGTGCTATTGAGCCCCGTCTGCCCATGAAGAACTCACGTGGATGGGATCCACCGCGCCACTGTTGGATCCAAAAGTACGCACTTGAGCAAGAAGTAAGTATCCTGGCGGCCGGGCCAGCTGGAGGACCGCCGGCGGCACCACAGCACCGAGGCCAGCCAGCCGGCGGCACAGTTGCTCCGGGCGCGGCGCGATTCCACTGCACGGCCAAGGCCGGGCAGCGCCGCGCCTCGGGCGCCATGTCGGAGGGTGGGATCATGTGGCTGTCACATGGGCAAGGCTAGCAGAGCTGGCAAACGGCGAGGCCCCCGTCGGCACCTTTGGGCTCTCCTTCGGGACAGCGACGGTAGCTGCTGGGGCCGGGATCCCCATTTATTCCTTCTGGCGTGGCCCCGCGGGCTGGGCGGGGCGGGCGCGTCGCCCTCTTGGGACGTCGCTCTCGCGGCCAGTGAGATCGCTGGAATGGGACACAGAGGCTGGAAAAAACAGGATGGAGGGAAGGATGGAAGGATCATTTCATTTTCTGTCATCCTGTTCTGGTGCCCGTAGCACCCCCGCCATGATTGCGCGTTGTTGGATACTCGGATTGGCTGCCTGTCCGTACGTGATTGGCACCACCCTACTGCGCCTCCATCTAGGAAGCTAATGTTGCGATGGTGGCTATGTATATCAAGACTCTCAAGTTCAACCCAAAACACGAAAATCTCACTAGAGTAAGCTATACCATCGCTGGACCTTAACCGAGTGGGCTGTTCGTCGTCGTGTGGATGACAGTTAAGATGACACAGCATGCCGCGTGCGTGTGTGCATGCACCAGCTTTGGGATGATCAGTGAGAAGGAATGTTTGAAAGCTGAAGTTGGGGACTAATCCTGTTGGAGCACCTGGCATGTTGCATCATCATTTGACAGTTACGGCCCTGCTGAATGAGGTTGATGCTTTCACCGATTTGGACCACATGGGAGAGCGAGCGAGCGTGTCTCCCGAAGCTTACACCGTGAAATTCTCCGATACAGCTCAGACCAGACCTGCTGATCCCCCTCCTACACCATAATGTCAAGACATACTCACATACATACGTACGTCCCACTTTGGCTGCATACATTCATACTACGTGGGCACCTGTCGTGTATAAGTATAAGCAGGCAATTAGAATGCTGCTGATCATTCATCATCTAATGAAGCTGGGCACTATAAGGCTGATATTGGAGGGCACCCGTCGTCCCTGTCACGTGTACGGACACGTGCACGTGGCACGTTGATTTTTGGGGTTCAAAGTACGATACAATGGGCATACTATAGCTTGTCCTAACAGTCGATGGGGGAACCTTGTGCAGTTGCTGACAGCGGACGGGGGCTGGCTGATGATAATCGTGTGCTGCAGTGTGCAAGTCGACAGAGGCTTCTGACGTATCCAGTTGCTGAATTGAAAAGGCCACGTACATCGATACAGATACAGCTAAGACATTATCGATGCTCTGCAAAATCAAATATATTCATTCCCCTTCCAGTGGCCACGCTCTTCTACACCTCTGGACAAGTTTAAGAAGCCGGCGAGGAAGAAGAAATATTGGAGGGCAATTGTTCTTTTGTGCTGGCCACAACGACCAGCTGCTAGTGAAAACTCAACTGTCTGCAGGGGATAAGAAGATGAAGCTCTGGACACATACAAGATAAAAAATGAAACTTAATGGTCTG-CAGGCGA-TCA-AACA-TA-TCA-TAGGAGCA-TGGAAGGAATGAGTGAAAACTCGGATGTAAGGTATTATCTCTTTAAACA-CA-GGGAAGGTTTCAAAGTTTTAATGAATAGCTTTATCTGATATTTGTATATAACTTGATTGATTTTTTTTCCTTTAAAGTTGCATCCCACTAGGTAGAGTATATGTCTGGTATTGTGATCAAAATGTTATATAATGCCAAAAGTAAAAAAAAAATGTTTATATTTCTTTCAGCAAAAAAAA] [+] EMBL AK119377 [AGCATAATCCTTAGCAACGCAGTTACAGAGGAAACCAAGCACCAGCTCCCACAGGCAGGCCTGCCTACATCCAGTCCAGCCGCTCACAAGTTTCTGAACTCATGAAGGAATGTGTTCCAACAGCAAAAGGGACACCTAGTGAGCATTAATACCAACAAGAACAACTCGGTAAAGGAACTGTGGTCTTGAGTATTTTGGACTAGTACTTGACAAATGTTCATCACACAATAAGAATAAATACAGCGAGTTGGGCCTTCTGTCTGGTTGTCTGAGAAGGGTTGAAGTAATTTGAAAGCTGTCTAAAAATTCACCCAAACAGAGAACTTCGGACAAGCGGCTCTATAGTAGTCTAACCCTAACCTCTCTCACCAATGAATGGCAGCAACAGCCTCAGCCCAGTTCCTCATTGTGCGAGGCTCCCCTGGCTGCACTGCCCGACTGGTCTTTCTCCAGGCTGCTCTAGATCTGGACTGGCGCACAGTGAGGCACAGGATGATCGATTGTGGCTCCAGATCAGGTGGCCCAACCATGGGAGGCCAGCTAGCACATCGGTGGCTTGTGGTAGACCTGCCAGCGAGTTAGCTTCCACAATGGCTGTGGTGGGGAACCAGCACATGGGCTTCAAGGTGAAGGAAAAGATCGAAGACAGGGTTGAAAGTGAAAAGATTGGTTAAAGGAGACACCTACAAACCGCGTGTTGAAGTGATGAAATGATAATGCATAGCGGTCCATGATTGAAAACCAATCGGGGTTCATTGAATAGAGAAACCCTGCTCTGTCATATGAGGAAGTTGCTTCGACGCTTACATGATCAGTGTACAGTGATCGTGGCTTTCAAATTGTGACAGAATTGAGTGGTACAAAACAGATAAATCCCTGTGTACACATTAAGCTTGATTGCATAGGTGATGCAACAGCAGTAATCTTTGATGCCCAGACAGATGTGAGAGTGGAAACAGGAAGTCAGATGGCCATGTGATATCAAGAGGAAAGCTGGATACATATACACAGTGCCCTTTCTTTGGACTGGCTTGCTCTACTCAAAGGAGGTAATTTCGCACAAAAGGCAACAGCAGAGATGGTTCACATCAGAGCACTGATAACCAGCCAATCATGAAGTTGTACCTTGTGCTATTGAGCCCCGTCTGCCCATGAAGAACTCACGTGGATGGGATCCACCGCGCCACTGTTGGATCCAAAAGTACGCACTTGAGCAAGAAGTAAGTATCCTGGCGGCCGGGCCAGCTGGAGGACCGCCGGCGGCACCACAGCACCGAGGCCAGCCAGCCGGCGGCACAGTTGCTCCGGGCGCGGCGCGATTCCACTGCACGGCCAAGGCCGGGCAGCGCCGCGCCTCGGGCGCCATGTCGGAGGGTGGGATCATGTGGCTGTCACATGGGCAAGGCTAGCAGAGCTGGCAAACGGCGAGGCCCCCGTCGGCACCTTTGGGCTCTCCTTCGGGACAGCGACGGTAGCTGCTGGGGCCGGGATCCCCATTTATTCCTTCTGGCGTGGCCCCGCGGGCTGGGCGGGGCGGGCGCGTCGCCCTCTTGGGACGTCGCTCTCGCGGCCAGTGAGATCGCTGGAATGGGACACAGAGGCTGGAAAAAACAGGATGGAGGGAAGGATGGAAGGATCATTTCATTTTCTGTCATCCTGTTCTGGTGCCCGTAGCACCCCCGCCATGATTGCGCGTTGTTGGATACTCGGATTGGCTGCCTGTCCGTACGTGATTGGCACCACCCTACTGCGCCTCCATCTAGGAAGCTAATGTTGCGATGGTGGCTATGTATATCAAGACTCTCAAGTTCAACCCAAAACACGAAAATCTCACTAGAGTAAGCTATACCATCGCTGGACCTTAACCGAGTGGGCTGTTCGTCGTCGTGTGGATGACAGTTAAGATGACACAGCATGCCGCGTGCGTGTGTGCATGCACCAGCTTTGGGATGATCAGTGAGAAGGAATGTTTGAAAGCTGAAGTTGGGGACTAATCCTGTTGGAGCACCTGGCATGTTGCATCATCATTTGACAGTTACGGCCCTGCTGAATGAGGTTGATGCTTTCACCGATTTGGACCACATGGGAGAGCGAGCGAGCGTGTCTCCCGAAGCTTACACCGTGAAATTCTCCGATACAGCTCAGACCAGACCTGCTGATCCCCCTCCTACACCATAATGTCAAGACATACTCACATACATACGTACGTCCCACTTTGGCTGCATACATTCATACTACGTGGGCACCTGTCGTGTATAAGTATAAGCAGGCAATTAGAATGCTGCTGATCATTCATCATCTAATGAAGCTGGGCACTATAAGGCTGATATTGGAGGGCACCCGTCGTCCCTGTCACGTGTACGGACACGTGCACGTGGCACGTTGATTTTTGGGGTTCAAAGTACGATACAATGGGCATACTATAGCTTGTCCTAACAGTCGATGGGGGAACCTTGTGCAGTTGCTGACAGCGGACGGGGGCTGGCTGATGATAATCGTGTGCTGCAGTGTGCAAGTCGACAGAGGCTTCTGACGTATCCAGTTGCTGAATTGAAAAGGCCACGTACATCGATACAGATACAGCTAAGACATTATCGATGCTCTGCAAAATCAAATATATTCATTCCCCTTCCAGTGGCCACGCTCTTCTACACCTCTGGACAAGTTTAAGAAGCCGGCGAGGAAGAAGAAATATTGGAGGGCAATTGTTCTTTTGTGCTGGCCACAACGACCAGCTGCTAGTGAAAACTCAACTGTCTGCAGGGGATAAGAAGATGAAGCTCTGGACACATACAAGATAAAAAATGAAACTTAATGGTCTG CAGGCGA TCA AACA TA TCA TAGGAGCA TGGAAGGAATGAGTGAAAACTCGGATGTAAGGTATTATCTCTTTAAACA CA GGGAAGGTTTCAAAGTTTTAATGAATAGCTTTATCTGATATTTGTATATAACTTGATTGATTTTTTTTCCTTTAAAGTTGCATCCCACTAGGTAGAGTATATGTCTGGTATTGTGATCAAAATGTTATATAATGCCAAAAGTAAAAAAAAAATGTTTATAT ] [+] EMBL BI805336 [ tTGGTCTGCCCGGGGATTCACAACACTATTCACTAGGAGCACTGGAAGGAATGAGTGAAAACTCGGATGTAAGGTATTATCTCTTTAAACACCACGGGAAGGTTTCAAAGTTTTAATGAATAGCTTTATCTGATATTTGTATATAACTTGATTGATTTTTTTTCCTTTAAAGTTGCATCCCACTAGGTAGAGTATATGTCTGGTATTGTGATCAAAATGTTATATAATGCC AAAGTAAAAAAAAAATGTTTATATTTCTTTCAGCAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||