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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15226#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1761 fasta sequence
[CTCGCCGCGCTTAAACCCTCGCCGCCTTCCCGCTCCGAACGCCCCTCCCTTCGCCGCCGCCCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTCTCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAGTGCCGCAGGCTCCATCGTTCGGGTTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCAATGCCAAGTGCAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTGGACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAGTTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATGTTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT-GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC-GTAGGCATGAAGT-CCCGTGGTGTATAC-GAGACCCCCGGTGGCACCATCAT-GGCAGCTGCTGT-CCGTGAGCTC-GAGTCCTTGACTTTGGACAGGGAG-ACAAT-GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT-GGTCTACG-CTGGCC-GTTGGTTCGACCC--GCTCCG-ACAATCCAT-TGATGCGTTC-ATGGAGAACATTACCGCG-ACAACAACCGGCTCCGTGACTCTCAAGCTGTA-CAAGGGCTCCGTAAACGTCGCGT-CCCGGAAGAGCCCATACAGCCTGTACA-GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA-GAGTC-CGGGCAATGCT-GGAGAA-GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT-CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTCAAAAGGTGCCG]
[+] EMBL CB641170 [CTCGCCGCGCTTAAACCCTCGCCGCCTTCCCGCTCCGAACGCCCCTCCCTTCGCCGCCGCCCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTCTCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAGTGCCGCAGGCTCCATCGTTCGGGTTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCACCCCCCCCCGCAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTGGACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAGTTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTCCACTGCTGATGTTGGCCAGGG ]
[+] EMBL CB641270 [CTCGCCGCGCTTAAACCCTCGCCGCCTTCCCGCTCCGAACGCCCCTCCCTTCGCCGCCGCCCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTCTCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAATGCCG ]
[+] EMBL AK071066 [ CCCGCTCCGAACGCCCCTCCCTTCGCCGCCGCCCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTCTCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAGTGCCGCAGGCTCCATCGTTCGGGTTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCAATGCCAAGTGCAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTGGACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAGTTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATGTTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATAC GAGACCCCCGGTGGCACCATCAT GGCAGCTGCTGT CCGTGAGCTC GAGTCCTTGACTTTGGACAGGGAG ACAAT GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGGGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTCATGTGGTGCCG]
[+] EMBL CF305102 [ TCCATCGTTCGGGTTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCAATGCCAAGTGCAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTGGACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAGTTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATGTTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAA ]
[+] EMBL C97459 [ TATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATGTTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCATGGGTATTGGGCGCATTGATATNGTGGNAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATAC GAGANCCCCCGTGGCACCATCAT GGCA CTGCTGTNCCGTGAGCTCNAATTCCTTG ]
[+] EMBL AK058994 [ TAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATAC GAGACCCCCGGTGGCACCATCAT GGCAGCTGCTGT CCGTGAGCTC GAGTCCTTGACTTTGGACAGGGAG ACAAT GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATA ]
[+] EMBL AU174454 [ CCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAG ]
[+] EMBL C73777 [ ATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATACGGAGACCCCCGGTGGCACCATCAT GGCAGCTGCTGT CCGTGAGCTC GAGTn ]
[+] EMBL C74887 [ CAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATAC GAGACCCCCGGTGGCACCATCATGGGCAGCTGCTGT CCGTGAGCTC GAGTCCTTGACTTTGGACAGGGAG ACAAT GCAGTGGAAGGACATGCTTGC ]
[+] EMBL BI798835 [ acCAT GGTATTGGGCGCATTGATATGGTGG AACC CCTCTGTA GCATGAAGT CCC TGGTGTATAC GAGACCCCCGGTGGCACCATCAT GGCA CT CTGT CCGTGAGCTC GAGTCCTTGACTTTGGACAGGGAG AC AT GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTACCAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACACGGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCACGAGTC CGGGC ATGCT GGAGAACGGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCAT CCCCATTCGATTACCACTTTCGTGAAaaaaaaaa ]
[+] EMBL BI799157 [ AACCCCCCTT GTA GCATGAAGTCCCCGT GTGTATAC GACACCCCCGGT GCACCATCAT GGCA CTGCTGT CCGTGAGCTC GAGTCCTTGACTTT GACAGGGAGCACAATCCCAGTGGAA GACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CT GCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC C GGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTCAAAA ]
[+] EMBL BI798049 [ GACAGGGAG ACAAT GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTCACGGGCAATGCTCGGAGAA CCGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCATCCCCACTTCGATTACCACTTTCGTGAAaaaaaaaa ]
[+] EMBL CA765721 [ GTGGAAGGACATGCTTGCTCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCGTACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGTTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTC ]
[+] EMBL BI798640 [ cccCCGAGTTGGGTCTACGTCTGCCCTGTGTGTTCGACCCCTGTTCCGCACAATCCATGTGATGCGTTCAATGGAGACCTTTCCCGCGCACAACAACCGGCTCCGTGACTCTCAA CTGTA CAAGGGCTCCGTAAACTTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC C GGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACT CCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTCAAAAa ]
[+] EMBL BI798637 [ G CTGCCC GTT GTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAA CTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCAT CTC ATTCGATTAC ACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATT C ATAAGATTGTCTCAAAA ]
[+] EMBL AU058017 [ gGAACATTACCGCG ACAACAACCGGCTCCGTGANTCTCAAGCTTTA CAAGGGCTCCGTAAACGTCGCGTCCCCGGAANACCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAAaa ]
[+] EMBL BI797655 [ CAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAA TGTTGCATGATCATGTAATGAATAAT GGGTTGTACCTGATTTTGACTT GTTGTCTAAATGCCAATAAGA TGTCTCAAA ]
[+] EMBL AK058700 [ CCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTG ]
[-] EMBL AA750392 [ TGAATAC TTCCGAG TGTA TAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCT ]
consensusID : consensus_15226#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 224 fasta sequence
[GCGTTCGAAAGCTTNACTGCCATCTCAATTCGNTTNCNACTTTCGTGAAGTNTTNCNTNATCATGTAATGAATAATGGGGTTNTNCCTGNTTTTGACTTGGTTGTCTAAATTGCAATNAGATTGTCTCATGTGGTGCCGTCNTTGTGTTTTTTAAAAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAANA]
[+] EMBL AU165922 [GCGTTCGAAAGCTTNACTGCCATCTCAATTCGNTTNCNACTTTCGTGAAGTNTTNCNTNATCATGTAATGAATAATGGGGTTNTNCCTGNTTTTGACTTGGTTGTCTAAATTGCAATNAGATTGTCTCATGTGGTGCCGTCNTTGTGTTTTTTAAAAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAANA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15226#0 CTCGCCGCGCTTAAACCCTCGCCGCCTTCCCGCTCCGAACGCCCCTCCCTTCGCCGCCGC 60
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 CCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTC 120
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 TCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAGTGCCGCAGGCTCCATCGTTCGGG 180
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 TTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCAATGCCAAGTG 240
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 CAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTG 300
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 GACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAG 360
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 TTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATG 420
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 TTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAA 480
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 GCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCT 540
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 TGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTG 600
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 TTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATG 660
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 GATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACC 720
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 CTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTA 780
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 TTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCC 840
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 GTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATG 900
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 AGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTG 960
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 AGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCT 1020
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 CACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCATGGTATTGGGCGCA 1080
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 TTGATATGGTGGAAAACCGCCTCGTAGGCATGAAGTCCCGTGGTGTATACGAGACCCCCG 1140
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 GTGGCACCATCATGGCAGCTGCTGTCCGTGAGCTCGAGTCCTTGACTTTGGACAGGGAGA 1200
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 CAATGCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCTGGTCTACGCTGGCCGTT 1260
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 GGTTCGACCCGCTCCGACAATCCATTGATGCGTTCATGGAGAACATTACCGCGACAACAA 1320
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 CCGGCTCCGTGACTCTCAAGCTGTACAAGGGCTCCGTAAACGTCGCGTCCCGGAAGAGCC 1380
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 CATACAGCCTGTACAGGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGG 1440
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 CTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCAGAGTCCGGGCAATGCTGG 1500
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 AGAAGGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAAT 1560
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 GTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTAT 1620
consensus_15226#1 ------------------------------------------------------------
consensus_15226#0 TAGCGTTCGAAAGCTTAACTGCCATCTCAATTCGATTACAACTTTCGTGAAGTGTTGCAT 1680
consensus_15226#1 --GCGTTCGAAAGCTTNACTGCCATCTCAATTCGNTTNCNACTTTCGTGAAGTNTTNCNT 58
************** ***************** ** * ************* ** * *
consensus_15226#0 GATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATA 1740
consensus_15226#1 NATCATGTAATGAATAATGGGGTTNTNCCTGNTTTTGACTTGGTTGTCTAAATTGCAATN 118
*********************** * **** ***************************
consensus_15226#0 AGATTGTCTCAAAAGGTGCCG--------------------------------------- 1761
consensus_15226#1 AGATTGTCTCATGTGGTGCCGTCNTTGTGTTTTTTAAAAAAAANNAAAAAAAAAAAAAAA 178
*********** *******
consensus_15226#0 ----------------------------------------------
consensus_15226#1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAANA 224
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||