These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15226#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1761 fasta sequence [CTCGCCGCGCTTAAACCCTCGCCGCCTTCCCGCTCCGAACGCCCCTCCCTTCGCCGCCGCCCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTCTCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAGTGCCGCAGGCTCCATCGTTCGGGTTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCAATGCCAAGTGCAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTGGACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAGTTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATGTTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT-GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC-GTAGGCATGAAGT-CCCGTGGTGTATAC-GAGACCCCCGGTGGCACCATCAT-GGCAGCTGCTGT-CCGTGAGCTC-GAGTCCTTGACTTTGGACAGGGAG-ACAAT-GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT-GGTCTACG-CTGGCC-GTTGGTTCGACCC--GCTCCG-ACAATCCAT-TGATGCGTTC-ATGGAGAACATTACCGCG-ACAACAACCGGCTCCGTGACTCTCAAGCTGTA-CAAGGGCTCCGTAAACGTCGCGT-CCCGGAAGAGCCCATACAGCCTGTACA-GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA-GAGTC-CGGGCAATGCT-GGAGAA-GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT-CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTCAAAAGGTGCCG] [+] EMBL CB641170 [CTCGCCGCGCTTAAACCCTCGCCGCCTTCCCGCTCCGAACGCCCCTCCCTTCGCCGCCGCCCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTCTCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAGTGCCGCAGGCTCCATCGTTCGGGTTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCACCCCCCCCCGCAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTGGACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAGTTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTCCACTGCTGATGTTGGCCAGGG ] [+] EMBL CB641270 [CTCGCCGCGCTTAAACCCTCGCCGCCTTCCCGCTCCGAACGCCCCTCCCTTCGCCGCCGCCCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTCTCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAATGCCG ] [+] EMBL AK071066 [ CCCGCTCCGAACGCCCCTCCCTTCGCCGCCGCCCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTCTCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAGTGCCGCAGGCTCCATCGTTCGGGTTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCAATGCCAAGTGCAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTGGACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAGTTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATGTTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATAC GAGACCCCCGGTGGCACCATCAT GGCAGCTGCTGT CCGTGAGCTC GAGTCCTTGACTTTGGACAGGGAG ACAAT GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGGGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTCATGTGGTGCCG] [+] EMBL CF305102 [ TCCATCGTTCGGGTTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCAATGCCAAGTGCAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTGGACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAGTTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATGTTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAA ] [+] EMBL C97459 [ TATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATGTTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCATGGGTATTGGGCGCATTGATATNGTGGNAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATAC GAGANCCCCCGTGGCACCATCAT GGCA CTGCTGTNCCGTGAGCTCNAATTCCTTG ] [+] EMBL AK058994 [ TAGTGGTGCAAGCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCTTGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTGTTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATAC GAGACCCCCGGTGGCACCATCAT GGCAGCTGCTGT CCGTGAGCTC GAGTCCTTGACTTTGGACAGGGAG ACAAT GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATA ] [+] EMBL AU174454 [ CCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATGGATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACCCTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAG ] [+] EMBL C73777 [ ATGCTATTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATACGGAGACCCCCGGTGGCACCATCAT GGCAGCTGCTGT CCGTGAGCTC GAGTn ] [+] EMBL C74887 [ CAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCCGTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATGAGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTGAGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCTCACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCAT GGTATTGGGCGCATTGATATGGTGGAAAACCGCCTC GTAGGCATGAAGT CCCGTGGTGTATAC GAGACCCCCGGTGGCACCATCATGGGCAGCTGCTGT CCGTGAGCTC GAGTCCTTGACTTTGGACAGGGAG ACAAT GCAGTGGAAGGACATGCTTGC ] [+] EMBL BI798835 [ acCAT GGTATTGGGCGCATTGATATGGTGG AACC CCTCTGTA GCATGAAGT CCC TGGTGTATAC GAGACCCCCGGTGGCACCATCAT GGCA CT CTGT CCGTGAGCTC GAGTCCTTGACTTTGGACAGGGAG AC AT GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTACCAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACACGGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCACGAGTC CGGGC ATGCT GGAGAACGGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCAT CCCCATTCGATTACCACTTTCGTGAAaaaaaaaa ] [+] EMBL BI799157 [ AACCCCCCTT GTA GCATGAAGTCCCCGT GTGTATAC GACACCCCCGGT GCACCATCAT GGCA CTGCTGT CCGTGAGCTC GAGTCCTTGACTTT GACAGGGAGCACAATCCCAGTGGAA GACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CT GCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC C GGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTCAAAA ] [+] EMBL BI798049 [ GACAGGGAG ACAAT GCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTCACGGGCAATGCTCGGAGAA CCGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCATCCCCACTTCGATTACCACTTTCGTGAAaaaaaaaa ] [+] EMBL CA765721 [ GTGGAAGGACATGCTTGCTCTCAAGTACGCCGAGCT GGTCTACG CTGGCC GTTGGTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCGTACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGTTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTC ] [+] EMBL BI798640 [ cccCCGAGTTGGGTCTACGTCTGCCCTGTGTGTTCGACCCCTGTTCCGCACAATCCATGTGATGCGTTCAATGGAGACCTTTCCCGCGCACAACAACCGGCTCCGTGACTCTCAA CTGTA CAAGGGCTCCGTAAACTTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC C GGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACT CCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATAAGATTGTCTCAAAAa ] [+] EMBL BI798637 [ G CTGCCC GTT GTTCGACCC GCTCCG ACAATCCAT TGATGCGTTC ATGGAGAACATTACCGCG ACAACAACCGGCTCCGTGACTCTCAA CTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCAT CTC ATTCGATTAC ACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATT C ATAAGATTGTCTCAAAA ] [+] EMBL AU058017 [ gGAACATTACCGCG ACAACAACCGGCTCCGTGANTCTCAAGCTTTA CAAGGGCTCCGTAAACGTCGCGTCCCCGGAANACCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAAaa ] [+] EMBL BI797655 [ CAACCGGCTCCGTGACTCTCAAGCTGTA CAAGGGCTCCGTAAACGTCGCGT CCCGGAAGAGCCCATACAGCCTGTACA GGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAACTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAA TGTTGCATGATCATGTAATGAATAAT GGGTTGTACCTGATTTTGACTT GTTGTCTAAATGCCAATAAGA TGTCTCAAA ] [+] EMBL AK058700 [ CCTCATTTGAGAATGGGGAGATCTACAACCAGGCTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCA GAGTC CGGGCAATGCT GGAGAA GGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAATGTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTATTAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTG ] [-] EMBL AA750392 [ TGAATAC TTCCGAG TGTA TAGCGTTCGAAAGCTTAACTGCCAT CTCAATTCGATTACAACTTTCGTGAAGTGTTGCATGATCATGTAATGAATAATGGGGTTGTACCT ] consensusID : consensus_15226#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 224 fasta sequence [GCGTTCGAAAGCTTNACTGCCATCTCAATTCGNTTNCNACTTTCGTGAAGTNTTNCNTNATCATGTAATGAATAATGGGGTTNTNCCTGNTTTTGACTTGGTTGTCTAAATTGCAATNAGATTGTCTCATGTGGTGCCGTCNTTGTGTTTTTTAAAAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAANA] [+] EMBL AU165922 [GCGTTCGAAAGCTTNACTGCCATCTCAATTCGNTTNCNACTTTCGTGAAGTNTTNCNTNATCATGTAATGAATAATGGGGTTNTNCCTGNTTTTGACTTGGTTGTCTAAATTGCAATNAGATTGTCTCATGTGGTGCCGTCNTTGTGTTTTTTAAAAAAAANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAANA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15226#0 CTCGCCGCGCTTAAACCCTCGCCGCCTTCCCGCTCCGAACGCCCCTCCCTTCGCCGCCGC 60 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 CCCCGACCATGGCGCACGCCCTCGGCTGCGGCGCCGCCACCGCCCCCGCCGGGGTGGGTC 120 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 TCCTCCACCACCACGAGAAGGCTGGGGCGTTGTTCAGTGCCGCAGGCTCCATCGTTCGGG 180 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 TTCAGCAGCTCAGCGGGAAGGGGAGCAAAAGCCAAGCTATAAGATGTGCAATGCCAAGTG 240 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 CAAGTGAGCATGGTGGAATTTCAACCGCAACAGCTAGTAGTAGTGATCAAAAGAAAGGTG 300 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 GACTGCGTGGCAAACTGAATAAAGTTGTTCTAGCTTACAGTGGTGGTTTGGATACATCAG 360 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 TTATTGTTCCATGGCTCCGGGAGAACTATGGTTGTGAAGTTGTCTGTTTCACTGCTGATG 420 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 TTGGCCAGGGTGACATTGAATTGGAAGGGCTAGAGAAGAAGGCAAAAGCTAGTGGTGCAA 480 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 GCCAGCTTGTTGTGAAGGACTTGAAAGAAGAGTTCGTTAGTGAATACATTTACCCCTGCT 540 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 TGCGTGCTGGTGCAGTTTATGAAAGAAAGTATCTGCTGGGGACTTCAATGGCTAGGCCTG 600 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 TTATTGCCAAGGCAATGGTTGATGTTGCAAAGGAAGTTGGTGCAGATGCAGTTGCTCATG 660 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 GATGCACTGGAAAAGGCAATGATCAGGTTCGTTTTGAGCTTACATTCTATGCTTTAAACC 720 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 CTGAGCTTAAAGTGGTGGCACCTTGGAGGGAGTGGGATATCACAGGACGTGAAGATGCTA 780 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 TTGAGTATGCAAAGAAACACAATGTGCCAATTCCTGTTACAAAGAAATCAATATACAGCC 840 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 GTGATCGAAATTTGTGGCACCTTAGCCATGAGGGTGACATTTTGGAAGATCCAGCAAATG 900 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 AGCCAAAGGAAGATATGTATATGATGTCAGTTGCACCAGAAAATGCACCTTCAAAACCTG 960 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 AGTATTTGGAGATTGGTATTATTGCAGGTGTTCCTGTTTCCATCAATGGAAAAGATCTCT 1020 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 CACCAGCATCTCTCCTTGCCAAGCTCAATGAAATCGGTGGAAAGCATGGTATTGGGCGCA 1080 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 TTGATATGGTGGAAAACCGCCTCGTAGGCATGAAGTCCCGTGGTGTATACGAGACCCCCG 1140 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 GTGGCACCATCATGGCAGCTGCTGTCCGTGAGCTCGAGTCCTTGACTTTGGACAGGGAGA 1200 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 CAATGCAGTGGAAGGACATGCTTGCCCTCAAGTACGCCGAGCTGGTCTACGCTGGCCGTT 1260 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 GGTTCGACCCGCTCCGACAATCCATTGATGCGTTCATGGAGAACATTACCGCGACAACAA 1320 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 CCGGCTCCGTGACTCTCAAGCTGTACAAGGGCTCCGTAAACGTCGCGTCCCGGAAGAGCC 1380 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 CATACAGCCTGTACAGGGAAGACATCTCCTCATTTGAGAATGGGGAGATCTACAACCAGG 1440 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 CTGATGCTGAAGGGTTCATCAGGCTATATGGTCTCCCTACCAGAGTCCGGGCAATGCTGG 1500 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 AGAAGGGCATCTAAGCCCCTGTTTTCTGCTTAAAATGTACTTCTGTGCTTTGGAGAAAAT 1560 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 GTAGCACCACCTCATGCAGTGTTGCCTGCAGGTAGGCACTGAATACTTTCCGAGTTGTAT 1620 consensus_15226#1 ------------------------------------------------------------ consensus_15226#0 TAGCGTTCGAAAGCTTAACTGCCATCTCAATTCGATTACAACTTTCGTGAAGTGTTGCAT 1680 consensus_15226#1 --GCGTTCGAAAGCTTNACTGCCATCTCAATTCGNTTNCNACTTTCGTGAAGTNTTNCNT 58 ************** ***************** ** * ************* ** * * consensus_15226#0 GATCATGTAATGAATAATGGGGTTGTACCTGATTTTGACTTGGTTGTCTAAATTGCAATA 1740 consensus_15226#1 NATCATGTAATGAATAATGGGGTTNTNCCTGNTTTTGACTTGGTTGTCTAAATTGCAATN 118 *********************** * **** *************************** consensus_15226#0 AGATTGTCTCAAAAGGTGCCG--------------------------------------- 1761 consensus_15226#1 AGATTGTCTCATGTGGTGCCGTCNTTGTGTTTTTTAAAAAAAANNAAAAAAAAAAAAAAA 178 *********** ******* consensus_15226#0 ---------------------------------------------- consensus_15226#1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAANA 224 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||