Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 15228 cluster # 15228       Sequences # 20       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15228#0 length = 2340 sequences # 15  
consensus_15228#1 length = 689 sequences # 3  
 consensus_15228#2 length = 465 sequences # 1  
consensus_15228#3 length = 382 sequences # 1  
consensusID : consensus_15228#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 2340
fasta sequence 
                              [ACGCCCCCTTCTCGCGTTCGCGTCGACGGGAATAAAATCCCCCGCGTCTCCTCTTCTCCTCGCGCAACTCGCTCATCTCATCGCTCTCGCCTCGACTCGCCTCCACGAAGCCCACCTCGACTCGCCATGGCCATGGACGACCTCGCCGGCTCATCCTCCTCCTCCTCCGCGATGGACGCCGTGGTCGCCGACCCCTCGCACGGGTGGCAGAAGGTCACCTACCCCAAGCGCCACCGCAAGCAGGGGGCGGCGGCGCTGCCCTCCGCGGCTGCTCCCGATCTGGGGTTCCTGCCCAACGGCGGCGGCAAGGTCAACGT-GTTCGAGGCCGTCGACAGGAACGCCGAGAAGCGCCACCGCGCGCTCCTGGCCGCCAGGGACGCGGCCGACCCCGACGCCGCGCGGATCGCCGCCGCCACGGCCTCCGCGTACTCTGACGACGACGACGACTCCGACGAGGCGCAGGCGACTCGCCCCGAGGGGGAGGTGAAGAAGCCCAAGG-TGAAGAAGCCGAAGAAGCCCAAGGTGACGGTCGCCGAGGCGGCCGCTCTGATCGACGCCGAGAACCTCGCGGCGCATCTCGTGCAGATCTCGGAATCTTACGAGAACCAGCAGGATATTCAGCTCATGCGGTTCGCCGACTACTTTGGCAGGTCATTTGCAAGCGTGAGCGC-CGCCCAGTTCCCCTGGGCGAAGATGTTCAAGGAATCACTAGTGTCCAAGATGGTTGATATTCCCTTGTGCCATATTCCTGAACCAGTTCGCAACACAGCGAGTGACTGGATCAATCAGAGATCTCCTGATGCCCTGGGAGACTTTGTCATGTGGTGCATAGACAGCATCATGTCTGAACTGTCAGGTCAAGCAGTAGGCGCTAAGGGTTCAAAGAAGGCCGCACAGCAAACTCCAAGGGCCCAGGTTGCAATATTTGTTGTGCTTGCCTTGACTGTAAGAAGGAAACCAGAGGTACTAACAAACGTCCTGCCAAAAATAATGGGAAACAATAAGTATCTTGGGCAGGAAAAGCTTCCAATCATTGTTTGGGTTATTGCTCAGGCATCTCAAGGTGACCTAGTGACTGGAATGTTTTGTTGGGCTCATTTCCTGTTTCCCACACTGTGTGCTAAGCCAAGTGGGAATCCCCAGACGAGAGATTTAGTTCTGCAGTTGCTCGAAAGAATTTTGTCTGCCCCCAAAGCTC-GA-GGCATC-TTAC-TG-AAT-GGTGCTG--TTAGAAAGGGGGAACGCCTGATTCCCCCTGTTACATTTGATCTGTTCATGAGAGCTGCATTTCCTGTTTCCAGCGCTCGTGTAAAGGCTACAGAGAGGTTTGAAGCAGCCTACCCAACAATCAAGGAGTTGGCCCTTGCTGGTCCTCCTGGCTCAAAAACCGTGAAACAAGCAGCACAGCAGCTTTTGCCATTGTGTGTGAAAGCAATGCAAGAAAATAACGCAGACCTCACCGGGGAGTCTGCTGGTGTATTCATTTGGTGCCTGACTCAAAATGCAGAGTCCTACAAGCTGTGGGAAAGACTTCATCCTGAAAATGTTGAAGCCAGTGTTGTAGTCCTTAGCACTATAGTCACAAAATGGAGCGAGCTGTCTCATAAGCTCAGTGCTGAATCTCTTAAGGTGACTCTGAAGAACTTAAGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACT-GGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGA-AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATGCCATGTGTGATATTATTGCTGAATCATCTGTACTTGTTGGTGTTGATGATATCATATCCTGCTAT]

[+] EMBL CB676071             [ACGCCCCCTTCTCGCGTTCGCGTCGACGGGAATAAAATCCCCCGCGTCTCCTCTTCTCCTCGCGCAACTCGCTCATCTCATCGCTCTCGCCTCGACTCGCCTCCACGAAGCCCACCTCGACTCGCCATGGCCATGGACGACCTCGCCGGCTCATCCTCCTCCTCCTCCGCGATGGACGCCGTGGTCGCCGACCCCTCGCACGGGTGGCAGAAGGTCACCTACCCCAAGCGCCACCGCAAGCAGGGGGCGGCGGCGCTGCCCTCCGCGGCTGCTCCCGATCTGGGGTTCCTGCCCAACGGCGGCGGCAAGGTCAACGT GTTCGAGGCCGTCGACAGGAACGCCGAGAAGCGCCACCGCGCGCTCCTGGCCGCCAGGGACGCGGCCGACCCCGACGCCGCGCGGATCGCCGCCGCCACGGCCTCCGCGTACTCTGACGACGACGACGACTCCGACGAGGCGCAGGCGACTCGCCCCGAGGGGGAGGTGAAGAAGCCCAAGG TGAAGAAGCCGAAGAAGCCCAAGGTGACGGTCGCCGAGGCGGCCGCTCTGATCGACGCCGAGAACCTCGCGGCGCATCTCGTGCAGATCTCGGAATCTTACGAGAACCAGCAGGATATTCAGCTCATGCGGTTCGCCGACTACTTTGGCAGGTCATTTGCAAGCGTGAGCGC CGCCCAGTTCCCCTGGGCGAAGATGTTCAAGGAATCACTAGTGTCCAAGATGGTTGATATTCCCTTGTGCCATATTCCTGAACCAGTTCGCAACACAGCGAGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OSC8281              [                                 AAAATCCCCCGCGTCTCCTCTTCTCCTCGCGCAACTCGCTCATCTCATCGCTCTCGCCTCGACTCGCCTCCACGAAGCCCACCTCGACTCGCCATGGCCATGGACGACCTCGCCGGCTCATCCTCCTCCTCCTCCGCGATGGACGCCGTGGTCGCCGACCCCTCGCACGGGTGGCAGAAGGTCACCTACCNCAAGCGNCACCGCAAGCAGGGGGCGGNGGCGCTGCCNTCCGCGGCTGCTCCCGATCTGGGGTTCCTGCCCAANGGCGGCGGCAAGGTCAACGTNGTTCGAGGCCGTCGACAGGAACGNCGAGAAGCGNCAACG GGGTTCCTGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK121214             [                                                                     CGCTCATCTCATCGCTCTCGCCTGAACTAGACTACACGAAGCCCACCTCGACTAGCCATGGTCATGGACGACCTCGGCGGCTAATGCTCCTCCTCCTCCGCGATGGACGCCGTGGTCGCCGACCCGTCGCACGGGTGGCAGAAGGTCACCTACCCCAAGCGCCACCGCAAGCAGGGGGCGGCGGCGCTGCCCTCCGCGGCTGCTCCCGATCTGGGGTTCCTGCCCAACGGCGGCGGCAAGGTCAACGT GTTCGAGGCCGTCGACAGGAACGCCGAGAAGCGCCACCGCGCGCTCCTGGCCGCCAGGGACGCGGCCGACCCCGACGCCGCGCGGATCGCCGCCGCCACGGCCTCCGCGTACTCTGACGACGACGACGACTCCGACGAGGCGCAGGCGACTCGCCCCGAGGGGGAGGTGAAGAAGCCCAAGGCTGAAGAAGCCGAAGAAGCCCAAGGTGACGGTCGCCGAGGCGGCCGCTCTGATCGACGCCGAGAACCTCGCGGCGCATCTCGTGCAGATCTCGGAATCTTACGAGAACCAGCAGGATATTCAGCTCATGCGGTTCGCCGACTACTTTGGCAGGTCATTTGCAAGCGTGAGCGC CGCCCAGTTCCCCTGGGCGAAGATGTTCAAGGAATCACTAGTGTCCAAGATGGTTGATATTCCCTTGTGCCATATTCCTGAACCAGTTCGCAACACAGCGAGTGACTGGATCAATCAGAGATCTCCTGATGCCCTGGGAGACTTTGTCATGTGGTGCATAGACAGCATCATGTCTGAACTGTCAGGTCAAGCAGTAGGCGCTAAGGGTTCAAAGAAGGCCGCACAGCAAACTCCAAGGGCCCAGGTTGCAATATTTGTTGTGCTTGCCTTGACTGTAAGAAGGAAACCAGAGGTACTAACAAACGTCCTGCCAAAAATAATGGGAAACAATAAGTATCTTGGGCAGGAAAAGCTTCCAATCATTGTTTGGGTTATTGCTCAGGCATCTCAAGGTGACCTAGTTACTGGAATGTTTTGTTGGGCTCATTTCCTGTTTCCCACACTGTGTGCTAAGCCAAGTGGGAATCCCCAGACGAGAGATTTAGTTCTGCAGTTGCTCGAAAGAATTTTGTCTGCCCCCAAAGCTC GA GGCATC TTAC TG AAT GGTGCTG  TTAGAAAGGGGGAACGCCTGATTCCCCCTGTTACATTTGATCTGTTCATGAGAGCTGCATTTCCTGTTTCCAGCGCTCGTGTAAAGGCTACAGAGAGGTTTGAAGCAGCCTACCCAACAATCAAGGAGTTGGCCCTTGCTGGTCCTCCTGGCTCAAAAACCGTGAAACAAGCAGCACAGCAGCTTTTGCCATTGTGTGTGAAAGCAATGCAAGAAAATAACGCAGACCTCACCGGGGAGTCTGCTGGTGTATTCATTTGGTGCCTGACTCAAAATGCAGAGTCCTACAAGCTGTGGGAAAGACTTCATCCTGAAAATGTTGAAGCCAGTGTTGTAGTCCTTAGCACTATAGTCACAAAATGGAGCGAGCTGTCTCATAAGCTCAGTGCTGAATCTCTTAAGGTGACTCTGAAGAACTTAAGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACT GGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGA AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATGCCATGTGTGATATTATTGCTG                                            ]
[+] EMBL CB653647             [                                                                                       CGCCTCGACTCGCCTCCACGAAGCCCACCTCGACTCGCCATGGCCATGGACGACCTCGCCGGCTCATCCTCCTCCTCCTCCGCGATGGACGCCGTGGTCGCCGACCCCTCGCACGGGTGGCAGAAGGTCACCTACCCCAAGCGCCACCGCAAGCAGGGGGCGGCGGCGCTGCCCTCCGCGGCTGCTCCCGATCTGGGGTTCCTGCCCAACGGCGGCGGCAAGGTCAACGT GTTCGAGGCCGTCGACAGGAACGCCGAGAAGCGCCACCGCGCGCTCCTGGCCGCCAGGGACGCGGCCGACCCCGACGCCGCGCGGATCGCCGCCGCCACGGCCTCCGCGTACTCTGACGACGACGACGACTCCGACGAGGCGCAGGCGACTCGCCCCGAGGGGGAGGTGAAGAAGCCCAAGG TGAAGAAGCCGAACAAGCCCAAGGTGACGGTCGCCGAGGCGGCCGCTCTGATCGACGCCGAGAACCTCGCGGCGCATCTCGTGCAGATCTCGGAATCTTACGAGAACCAGCAGGATATTCAGCTCATGCGGTTCGCCGACTACTTTGGCAGGTCATTTGCAAGCGTGAGCGC CGCCCAGTTCCCCTGGGCGAAGATGTTCAAGGAATCACTAGTGTCCAAGATGGTTGATATTCCCTTGTGCCATATTCCTGAACCAGTTCGCAACACAGCGAGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB650242             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGAAGCCGAAGAAGCCCAAGGTGACGGTCGCCGAGGCGGCCGCTCTGATCGACGCCGAGAACCTCGCGGCGCATCTCGTGCAGATCTCGGAATCTTACGAGAACCAGCAGGATATTCAGCTCATGCGGTTCGCCGACTACTTTGGCAGGTCATTTGCAAGCGTGAGCGC CGCCCAGTTCCCCTGGGCGAAGATGTTCAAGGAATCACTAGTGTCCAAGATGGTTGATATTCCCTTGTGCCATATTCCTGAACCAGTTCGCAACACAGCGAGTGACTGGATCAATCAGAGATCTCCTGATGCCCTGGGAGACTTTGTCATGTGGTGCATAGACAGCATCATGTCTGAACTGTCAGGTCAAGCAGTAGGCGCTAAGGGTTCAAAGAAGGCCGCACAGCAAACTCCAAGGGCCCAGGTTGCAATATTTGTTGTGCTTGCCTTGACTGTAAGAAGGAAACCAGAGGTACTAACAAACGTCCTGCCAAAAATAATGGGAAACAATAAGTATCTTGGGCAGGAAAAGCTTCCAATCATTGTTTGGGTTATTGCTCAGGCATCTCAAGGTGACCTAGTGACTGGAATGTTTTGTTGGGCTCATTTCCTGTTTCCCACACTGTGTGCTAAGCCAAGTGGGAATCCCCAGACGAGAGATTTAGTTCTGCAGTTGCTCGAAAGAATTTTGTCTGCCCCCAAAGCTC GA GGCATC TTAC TG AAT GGTGCTG  TTAGAAAGGGGGAACGCCTGATTCCCCCTGTTACATTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB650282             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGAAGCCGAAGAAGCCCAAGGTGACGGTCGCCGAGGCGGCCGCTCTGATCGACGCCGAGAACCTCGCGGCGCATCTCGTGCAGATCTCGGAATCTTACGAGAACCAGCAGGATATTCAGCTCATGCGGTTCGCCGACTACTTTGGCAGGTCATTTGCAAGCGTGAGCGC CGCCCAGTTCCCCTGGGCGAAGATGTTCAAGGAATCACTAGTGTCCAAGATGGTTGATATTCCCTTGTGCCATATTCCTGAACCAGTTCGCAACACAGCGAGTGACTGGATCAATCAGAGATCTCCTGATGCCCTGGGAGACTTTGTCATGTGGTGCATAGACAGCATCATGTCTGAACTGTCAGGTCAAGCAGTAGGCGCTAAGGGTTCAAAGAAGGCCGCACAGCAAACTCCAAGGGCCCAGGTTGCAATATTTGTTGTGCTTGCCTTGACTGTAAGAAGGAAACCAGAGGTACTAACAAACGTCCTGCCAAAAATAATGGGAAACAATAAGTATCTTGGGCAGGAAAAGCTTCCAATCATTGTTTGGGTTATTGCTCAGGCATCTCAAGGTGACCTAGTGACTGGAATGTTTTGTTGGGCTCATTTCCTGTTTCCCACACTGTGTGCTAAGCCAAGTGGGAATCCCCAGACGAGAGATTTAGTTCTGCAGTTGCTCGAAAGAATTTTGTCTGCCCCCAAAGCTC GA GGCATC TTAC TG AAT GGTGCTG  TTAGAAAGGGGGAACGCCTGATTCCCCCTGTTACATTTGATCTGTTCATGAGAGCTGCATTTCCTGTTTCCAGCGCTCGTGTAAAGGCTACAGAGAGGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU097610             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GACGCCGAGAACCTCGCGGCGCATCTCGTGCAGATCTCGGAATCTTACGAGAACCANCAGGATATTCAGCTCATGCGGTTCGCCGACTACTTTGGCAGGTCATTTGCAANCGTGAGCGCGCGCCCAGTTCCCCTGGGCGAAGATGTTCAAGGAATCACTAGTGTCCAAGATGGTTGATATTCCCTTGTGCCATATTCCTGAACCAGTTCGNAACACAGCGAGTGACTGGATCAATCAGAGATCTCCTGATGCCCTGGGATACTTTGTCATGTGGTGCATAGACAGCATCATGTCTGAACTGTCAGGTCAAGCAGTAGGCGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C26485               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAGAGGTACTAACAAACGTCCTGCCAAAAATAATGGGAAACAATAAGTATCTTGGGCAGGAAAAGCTTCCAATCATTGTTTGGGTTATTGCTCAGGCATCTCAAGGTGACCTAGTGACTGGAATGTTTTGTTGGGCTCATTTCCTGTTTCCCACACTGTGTGCTAAGCCAAGTGGGAATCCCCAGACGAGAGATTTAGTTCTGCAGTTGCTCGAAAGAATTTTGTCTGCCCCCAAAGCTCGGAGGGCATCTTTACTTGAAATGGGTGCTGNTTTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK059332             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CACACTGTGTGCTAAGCCAAGTGGGAATCCCCAGACGAGAGATTTAGTTCTGCAGTTGCTCGAAAGAATTTTGTCTGCCCCCAAAGCTC GA GGCATC TTAC TG AAT GGTGCTG  TTAGAAAGGGGGAACGCCTGATTCCCCCTGTTACATTTGATCTGTTCATGAGAGCTGCATTTCCTGTTTCCAGCGCTCGTGTAAAGGCTACAGAGAGGTTTGAAGCAGCCTACCCAACAATCAAGGAGTTGGCCCTTGCTGGTCCTCCTGGCTCAAAAACCGTGAAACAAGCAGCACAGCAGCTTTTGCCATTGTGTGTGAAAGCAATGCAAGAAAATAACGCAGACCTCACCGGGGAGTCTGCTGGTGTATTCATTTGGTGCCTGACTCAAAATGCAGAGTCCTACAAGCTGTGGGAAAGACTTCATCCTGAAAATGTTGAAGCCAGTGTTGTAGTCCTTAGCACTATAGTCACAAAATGGAGCGAGCTGTCTCATAAGCTCAGTGCTGAATCTCTTAAGGTGACTCTGAAGAACTTAAGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACT GGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCGTTCTAGAGGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGA AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATGCCATGTGTGATATTATTGCTGAATCATCTGTACTTGTTGGTGTTGATGATATCATATCCTGCTAT]
[+] EMBL CA766270             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCAAGTGGGAATCCCCAGACGAGAGATTTAGTTCTGCAGTTGCTCGAAAGAATTTTGTCTGCCCCCAAAGCTC GA GGCATC TTAC TG AAT GGTGCTG  TTAGAAAGGGGGAACGCCTGATTCCCCCTGTTACATTTGATCTGTTCATGAGAGCTGCATTTCCTGTTTCCAGCGCTCGTGTAAAGGCTACAGAGAGGTTTGAAGCAGCCTACCCAACAATCAAGGAGTTGGCCCTTGCTGGTCCTCCTGGCTCAAAAACCGTGAAACAAGCAGCACAGCAGCTTTTGCCATTGTGTGTGAAAGCAATGCAAGAAAATAACGCAGACCTCACCGGGGAGTCTGCTGGTGTATTCATTTGGTGCCTGACTCAAAATGCAGAGTCCTACAAGCTGTGGGAAAGACTTCATCCTGAAAATGTTGAAGCCAGTGTTGTAGTCCTTAGCACTATAGTCACAAAATGGAGCGAGCTGTCTCATAAGCTCAGTGCTGAATCTCTTAAGGTGACTCTGAAGAACTTAAGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTCGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACTGGGGACAAGCTNCAGGCCATGGTGGCGTCTCACCTGTCGNTCTAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB676072             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCCAGTGTTGTAGTCCTTAGCACTATAGTCACAAAATGGAGCGAGCTGTCTCATAAGCTCAGTGCTGAATCTCTTAAGGTGACTCTGAAGAACTTAAGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACT GGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGA AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATGCCATGTGTGATATTATTGCTGA                                           ]
[-] EMBL CB650283             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CACTATAGTCACAAAATGGAGCGAGCTGTCTCATAAGCTCAGTGCTGAATCTCTTAAGGTGACTCTGAAGAACTTAAGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACT GGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGA AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATGCCATGTGTGATATTATTGCTGAATCATCAGGACTTGTTGGTGTTGATGA                ]
[-] EMBL CB650243             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACTATAGTCACAAAATGGAGCGAGCTGTCTCATAAGCTCAGTGCTGAATCTCTTAAGGTGACTCTGAAGAACTTAAGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTCCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACT GGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCACCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGA AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGanc                                                                                                                                                                                                              ]
[+] EMBL AU097597             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGCTCAGTGCTGAATCTCTTAA GTGACTCTGAAGAACTTAAGGACTAAGAATGA NCGCCCCTAGAANCAGCAACGGACTCTGGAAAGCAGNCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACT GGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGA AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTTTTGTTTTTCCTTTTTaaaaa                                                                                           ]
[+] EMBL OSC07491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGAAGGCTAATAAGACAGGGATAGATCCTAGNAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGNNNATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAANCGGGTTAGACTGATCGGTCANAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAAaaaaaaaa                                                             ]




>consensus_15228#0
ACGCCCCCTTCTCGCGTTCGCGTCGACGGGAATAAAATCCCCCGCGTCTCCTCTTCTCCT
CGCGCAACTCGCTCATCTCATCGCTCTCGCCTCGACTCGCCTCCACGAAGCCCACCTCGA
CTCGCCATGGCCATGGACGACCTCGCCGGCTCATCCTCCTCCTCCTCCGCGATGGACGCC
GTGGTCGCCGACCCCTCGCACGGGTGGCAGAAGGTCACCTACCCCAAGCGCCACCGCAAG
CAGGGGGCGGCGGCGCTGCCCTCCGCGGCTGCTCCCGATCTGGGGTTCCTGCCCAACGGC
GGCGGCAAGGTCAACGTGTTCGAGGCCGTCGACAGGAACGCCGAGAAGCGCCACCGCGCG
CTCCTGGCCGCCAGGGACGCGGCCGACCCCGACGCCGCGCGGATCGCCGCCGCCACGGCC
TCCGCGTACTCTGACGACGACGACGACTCCGACGAGGCGCAGGCGACTCGCCCCGAGGGG
GAGGTGAAGAAGCCCAAGGTGAAGAAGCCGAAGAAGCCCAAGGTGACGGTCGCCGAGGCG
GCCGCTCTGATCGACGCCGAGAACCTCGCGGCGCATCTCGTGCAGATCTCGGAATCTTAC
GAGAACCAGCAGGATATTCAGCTCATGCGGTTCGCCGACTACTTTGGCAGGTCATTTGCA
AGCGTGAGCGCCGCCCAGTTCCCCTGGGCGAAGATGTTCAAGGAATCACTAGTGTCCAAG
ATGGTTGATATTCCCTTGTGCCATATTCCTGAACCAGTTCGCAACACAGCGAGTGACTGG
ATCAATCAGAGATCTCCTGATGCCCTGGGAGACTTTGTCATGTGGTGCATAGACAGCATC
ATGTCTGAACTGTCAGGTCAAGCAGTAGGCGCTAAGGGTTCAAAGAAGGCCGCACAGCAA
ACTCCAAGGGCCCAGGTTGCAATATTTGTTGTGCTTGCCTTGACTGTAAGAAGGAAACCA
GAGGTACTAACAAACGTCCTGCCAAAAATAATGGGAAACAATAAGTATCTTGGGCAGGAA
AAGCTTCCAATCATTGTTTGGGTTATTGCTCAGGCATCTCAAGGTGACCTAGTGACTGGA
ATGTTTTGTTGGGCTCATTTCCTGTTTCCCACACTGTGTGCTAAGCCAAGTGGGAATCCC
CAGACGAGAGATTTAGTTCTGCAGTTGCTCGAAAGAATTTTGTCTGCCCCCAAAGCTCGA
GGCATCTTACTGAATGGTGCTGTTAGAAAGGGGGAACGCCTGATTCCCCCTGTTACATTT
GATCTGTTCATGAGAGCTGCATTTCCTGTTTCCAGCGCTCGTGTAAAGGCTACAGAGAGG
TTTGAAGCAGCCTACCCAACAATCAAGGAGTTGGCCCTTGCTGGTCCTCCTGGCTCAAAA
ACCGTGAAACAAGCAGCACAGCAGCTTTTGCCATTGTGTGTGAAAGCAATGCAAGAAAAT
AACGCAGACCTCACCGGGGAGTCTGCTGGTGTATTCATTTGGTGCCTGACTCAAAATGCA
GAGTCCTACAAGCTGTGGGAAAGACTTCATCCTGAAAATGTTGAAGCCAGTGTTGTAGTC
CTTAGCACTATAGTCACAAAATGGAGCGAGCTGTCTCATAAGCTCAGTGCTGAATCTCTT
AAGGTGACTCTGAAGAACTTAAGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGAC
TCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGG
TTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCC
GCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACTGGGACAAGCTCCAGGCC
ATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTA
TACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAA
GAAGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGT
AGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGT
TAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACA
CCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTT
TTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATGCCATG
TGTGATATTATTGCTGAATCATCTGTACTTGTTGGTGTTGATGATATCATATCCTGCTAT

consensusID : consensus_15228#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 689
fasta sequence 
                              [AGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACTGGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGAAGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCCCCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACA-TTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATG-CCA-TGTGTGATATTATTGCTGAATCATCTGTAAAAAAAAAAAAAAAAAAAAGGGA]

[-] EMBL CB653648             [AGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACTGGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGAAGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCCCCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACA TTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATG CCA TGTGTGATATTATTGCTGAATCATCTGTAAAAAAAAAAAAAAAAAAAAGGGA]
[-] EMBL CA759950             [     TAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACTGGGACAAGCTCCAGGCCATGGTGGCGTCTCGCCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGAAGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACA TTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATG CCA TGTGTGATATTATTGCTGAATCATCTGTAAAAAAAAAAAAAAA         ]
[+] EMBL BI806190             [                                                                                                                                                                                                                                                                    acCAGTTGATAAAAGCTTATACAGAGAATCCCAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGAAGGGATAGATCCTAGAAAAGAATACNGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGC ACTTTGCAGAGATAGAGAGTTAAGAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCCAATGGTTCGGCCTGAGGACTAACCCCCCCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACACTTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCCACATGCCCANTGTGTGATATTATTGCTGAATCA     AAAAAAAAA               ]




>consensus_15228#1
AGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGACTCTGGAAAGCAGGCATCTATC
AAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGGTTGAGCCGCGGCGGAGCCTGC
CTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCCGCAGGCTTTGTGCTATCTCCT
AACCTGGAGATCCCATCCGACTGGGACAAGCTCCAGGCCATGGTGGCGTCTCACCTGTCG
TTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGAT
GAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGAAGGGATAGATCCTAGAAAA
GAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCA
ACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAA
GGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCCCCTTTGCTCTATCTCGTT
TTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTTTTGTTTTTCCTT
TTTCTTCTGAATCTTGTTTGCTTTTACCAACATGCCATGTGTGATATTATTGCTGAATCA
TCTGTAAAAAAAAAAAAAAAAAAAAGGGA

consensusID : consensus_15228#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 465
fasta sequence 
                              [CTCGCCTCGACTCGCCTCCACGAAGCCCACCTCGACTCGCCATGGCCATGGACGACCTCGCCGGCTCATCCTCCTCCTCCTCCGCGATGGACGCCGTGGTCGCCGACCCCTCGCACGGGTGCAGAAGGTCACCTACCCCAAGCGCCACCGCAAGCAGGGGCGGCGGCGCTGCCCTCCGCGGCTGCTCCCGATCTGGGGTTCCTGCCCAACGGCGCGGCAAGGTCAACGTGTTCGAGGCCGTCGACAGGAACGCCGAGAAGCGCCACCGCGCGCTCCTGCCGCCAGGGACGCGGCCGACCCGACGCCGCGCGGATCGCCGCCGCCACGGCCTCCGCGTACTCTGACGACGACGACGACTCCGACGAGGCGCAGGCGACTCGCCCCGAGGGGGAGGTGAAGAAGCCCAAGGTGAAGAAGCCGAAGAAGCCCAAGGTGACGGTCGCCGAGCGCCGCTTAGAGGATCCA]

[+] EMBL BI796330             [CTCGCCTCGACTCGCCTCCACGAAGCCCACCTCGACTCGCCATGGCCATGGACGACCTCGCCGGCTCATCCTCCTCCTCCTCCGCGATGGACGCCGTGGTCGCCGACCCCTCGCACGGGTGCAGAAGGTCACCTACCCCAAGCGCCACCGCAAGCAGGGGCGGCGGCGCTGCCCTCCGCGGCTGCTCCCGATCTGGGGTTCCTGCCCAACGGCGCGGCAAGGTCAACGTGTTCGAGGCCGTCGACAGGAACGCCGAGAAGCGCCACCGCGCGCTCCTGCCGCCAGGGACGCGGCCGACCCGACGCCGCGCGGATCGCCGCCGCCACGGCCTCCGCGTACTCTGACGACGACGACGACTCCGACGAGGCGCAGGCGACTCGCCCCGAGGGGGAGGTGAAGAAGCCCAAGGTGAAGAAGCCGAAGAAGCCCAAGGTGACGGTCGCCGAGCGCCGCTTAGAGGATCCA]




>consensus_15228#2
CTCGCCTCGACTCGCCTCCACGAAGCCCACCTCGACTCGCCATGGCCATGGACGACCTCG
CCGGCTCATCCTCCTCCTCCTCCGCGATGGACGCCGTGGTCGCCGACCCCTCGCACGGGT
GCAGAAGGTCACCTACCCCAAGCGCCACCGCAAGCAGGGGCGGCGGCGCTGCCCTCCGCG
GCTGCTCCCGATCTGGGGTTCCTGCCCAACGGCGCGGCAAGGTCAACGTGTTCGAGGCCG
TCGACAGGAACGCCGAGAAGCGCCACCGCGCGCTCCTGCCGCCAGGGACGCGGCCGACCC
GACGCCGCGCGGATCGCCGCCGCCACGGCCTCCGCGTACTCTGACGACGACGACGACTCC
GACGAGGCGCAGGCGACTCGCCCCGAGGGGGAGGTGAAGAAGCCCAAGGTGAAGAAGCCG
AAGAAGCCCAAGGTGACGGTCGCCGAGCGCCGCTTAGAGGATCCA

consensusID : consensus_15228#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 382
fasta sequence 
                              [GGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGAAGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTAAAAAAAAAAAAAAAAAAA]

[+] EMBL BE040309             [GGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAGAGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGAAGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTGGGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGACTGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCTTCTAAAAAAAAAAAAAAAAAAA]




>consensus_15228#3
GGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTATACAG
AGAATCCAAAGGAGATGAAGTGAAGATTCTAGGAGTGAATGAAGAAGGCTAATAAGAAGG
GATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCCCGTAGTTG
GGGGGAGATGCAAGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATCGGGTTAGAC
TGATCGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGACTAACACCACC
TTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAACATTTTTGCT
TCTAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      ACGCCCCCTTCTCGCGTTCGCGTCGACGGGAATAAAATCCCCCGCGTCTCCTCTTCTCCT 60
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      CGCGCAACTCGCTCATCTCATCGCTCTCGCCTCGACTCGCCTCCACGAAGCCCACCTCGA 120
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      CTCGCCATGGCCATGGACGACCTCGCCGGCTCATCCTCCTCCTCCTCCGCGATGGACGCC 180
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GTGGTCGCCGACCCCTCGCACGGGTGGCAGAAGGTCACCTACCCCAAGCGCCACCGCAAG 240
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      CAGGGGGCGGCGGCGCTGCCCTCCGCGGCTGCTCCCGATCTGGGGTTCCTGCCCAACGGC 300
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GGCGGCAAGGTCAACGTGTTCGAGGCCGTCGACAGGAACGCCGAGAAGCGCCACCGCGCG 360
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      CTCCTGGCCGCCAGGGACGCGGCCGACCCCGACGCCGCGCGGATCGCCGCCGCCACGGCC 420
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      TCCGCGTACTCTGACGACGACGACGACTCCGACGAGGCGCAGGCGACTCGCCCCGAGGGG 480
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GAGGTGAAGAAGCCCAAGGTGAAGAAGCCGAAGAAGCCCAAGGTGACGGTCGCCGAGGCG 540
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GCCGCTCTGATCGACGCCGAGAACCTCGCGGCGCATCTCGTGCAGATCTCGGAATCTTAC 600
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GAGAACCAGCAGGATATTCAGCTCATGCGGTTCGCCGACTACTTTGGCAGGTCATTTGCA 660
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      AGCGTGAGCGCCGCCCAGTTCCCCTGGGCGAAGATGTTCAAGGAATCACTAGTGTCCAAG 720
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      ATGGTTGATATTCCCTTGTGCCATATTCCTGAACCAGTTCGCAACACAGCGAGTGACTGG 780
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      ATCAATCAGAGATCTCCTGATGCCCTGGGAGACTTTGTCATGTGGTGCATAGACAGCATC 840
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      ATGTCTGAACTGTCAGGTCAAGCAGTAGGCGCTAAGGGTTCAAAGAAGGCCGCACAGCAA 900
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      ACTCCAAGGGCCCAGGTTGCAATATTTGTTGTGCTTGCCTTGACTGTAAGAAGGAAACCA 960
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GAGGTACTAACAAACGTCCTGCCAAAAATAATGGGAAACAATAAGTATCTTGGGCAGGAA 1020
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      AAGCTTCCAATCATTGTTTGGGTTATTGCTCAGGCATCTCAAGGTGACCTAGTGACTGGA 1080
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      ATGTTTTGTTGGGCTCATTTCCTGTTTCCCACACTGTGTGCTAAGCCAAGTGGGAATCCC 1140
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      CAGACGAGAGATTTAGTTCTGCAGTTGCTCGAAAGAATTTTGTCTGCCCCCAAAGCTCGA 1200
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GGCATCTTACTGAATGGTGCTGTTAGAAAGGGGGAACGCCTGATTCCCCCTGTTACATTT 1260
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GATCTGTTCATGAGAGCTGCATTTCCTGTTTCCAGCGCTCGTGTAAAGGCTACAGAGAGG 1320
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      TTTGAAGCAGCCTACCCAACAATCAAGGAGTTGGCCCTTGCTGGTCCTCCTGGCTCAAAA 1380
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      ACCGTGAAACAAGCAGCACAGCAGCTTTTGCCATTGTGTGTGAAAGCAATGCAAGAAAAT 1440
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      AACGCAGACCTCACCGGGGAGTCTGCTGGTGTATTCATTTGGTGCCTGACTCAAAATGCA 1500
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GAGTCCTACAAGCTGTGGGAAAGACTTCATCCTGAAAATGTTGAAGCCAGTGTTGTAGTC 1560
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ------------------------------------------------------------
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      CTTAGCACTATAGTCACAAAATGGAGCGAGCTGTCTCATAAGCTCAGTGCTGAATCTCTT 1620
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      ---------------------AGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGAC 39
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      AAGGTGACTCTGAAGAACTTAAGGACTAAGAATGAGGCGGCCCTAGAAGCAGCAACGGAC 1680
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      TCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGG 99
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      TCTGGAAAGCAGGCATCTATCAAGGCCGCGGACAAGTATTCCAAGGAGATCCTTGGAAGG 1740
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      TTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCC 159
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      TTGAGCCGCGGCGGAGCCTGCCTGAAGGGCAGCCTGCTGGTTATCACGCTTGCTGTTGCC 1800
consensus_15228#2      ------------------------------------------------------------
                                                                                   

consensus_15228#1      GCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACTGGGACAAGCTCCAGGCC 219
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      GCAGGCTTTGTGCTATCTCCTAACCTGGAGATCCCATCCGACTGGGACAAGCTCCAGGCC 1860
consensus_15228#2      -----------------------------------------CTCGCCTCGACTC---GCC 16
                                                                                   

consensus_15228#1      ATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTA 279
consensus_15228#3      -----GGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTA 55
consensus_15228#0      ATGGTGGCGTCTCACCTGTCGTTCTAGAAGTATATTTGTCCAGCAGTTGATAAAAGCTTA 1920
consensus_15228#2      TCCACGAAGCCCACCTCGACTCGCCATGGCCATGGACGACC--TCGCCGGCTCATCCTCC 74
                            *  * *   *  * *   * *     **    * **    *  *    *  **  

consensus_15228#1      TACAGAGAATCCAAAGGAGATGAAGT-GAAGATTCTAGGAGTGAATGAAGAAGGCTAATA 338
consensus_15228#3      TACAGAGAATCCAAAGGAGATGAAGT-GAAGATTCTAGGAGTGAATGAAGAAGGCTAATA 114
consensus_15228#0      TACAGAGAATCCAAAGGAGATGAAGT-GAAGATTCTAGGAGTGAATGAAGAAGGCTAATA 1979
consensus_15228#2      TCCTCCTCCGCGATGGACGCCGTGGTCGCCGACCCCTCGCACGGGTGCAGAAGGTCACCT 134
                       * *       * *  *  *  *  ** *  **  *   *   *  ** ******  *   

consensus_15228#1      AGA--AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCC 396
consensus_15228#3      AGA--AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCC 172
consensus_15228#0      AGA--AGGGATAGATCCTAGAAAAGAATACAGTTACCTTTTTCGCATCTTTTCCCAAGCC 2037
consensus_15228#2      ACCCCAAGCGCCACCGCAAGCAGGGGCGGCGGCGCTGCCCTCCGCGGCTGCTCCCGATCT 194
                       *    * *        * ** *  *    * *        * ***  **  **** * * 

consensus_15228#1      CGTAGTTGGGGGGAGATGCA-AGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATC 455
consensus_15228#3      CGTAGTTGGGGGGAGATGCA-AGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATC 231
consensus_15228#0      CGTAGTTGGGGGGAGATGCA-AGCAACTTTGCAGAGATAGAGAGTTAAAAAGTTTTAATC 2096
consensus_15228#2      GGGGTTCCTGCCCAACGGCGCGGCAAGGTCAACGTGTTCGAGGCCGTCGACAGGAACGCC 254
                        *   *   *   *   **   ****  *    * * * ***       *         *

consensus_15228#1      GGGTTAGACTGAT-CGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGAC 514
consensus_15228#3      GGGTTAGACTGAT-CGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGAC 290
consensus_15228#0      GGGTTAGACTGAT-CGGTCAGAAGAAGGAAAGGTTGGGCCAAATGGTTCGGCCTGAGGAC 2155
consensus_15228#2      GAGAAGCGCCACCGCGCGCTCCTGCCGCCAGGGACGCGGCCGACCCGACGCCGCGCGGAT 314
                       * *     *     **  *    *  *  * **  * * *  *     ** *  * *** 

consensus_15228#1      TAACACCCCCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAA 574
consensus_15228#3      TAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAA 350
consensus_15228#0      TAACACCACCTTTGCTCTATCTCGTTTTTCTGCATCTGCAGCATCTCAGATGATGAGAAA 2215
consensus_15228#2      CGCCGCCGCCACGGCCT--CCGCGTACTCTGACGACGACGACGACTCCGACGAGGCGCAG 372
                          * ** **   **     * ***  *    *  *  *  *  *** ** ** * * * 

consensus_15228#1      CATTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATG 634
consensus_15228#3      CATTTTTGCTTCTAAAAAAAAAAAAAAAAAAA---------------------------- 382
consensus_15228#0      CATTTTTGCTTCTTTTGTTTTTCCTTTTTCTTCTGAATCTTGTTTGCTTTTACCAACATG 2275
consensus_15228#2      GCGACTCGCCCCGAGGGGGAGGTGAAGAAGCCCAAGGTGAAGAAG------CCGAAGAAG 426
                            * **  *                                                

consensus_15228#1      CCATGTGTGATATTATTGCTGAATCATCTGTAAAAAAAAAAAAAAAAAAAAGGGA----- 689
consensus_15228#3      ------------------------------------------------------------
consensus_15228#0      CCATGTGTGATATTATTGCTGAATCATCTGTACTTGTTGGTGTTGATGATATCATATCCT 2335
consensus_15228#2      CCCAAGGTGACGGTCGCCGAGCGCCGCTTAGAGGATCCA--------------------- 465
                                                                                   

consensus_15228#1      -----
consensus_15228#3      -----
consensus_15228#0      GCTAT 2340
consensus_15228#2      -----


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)