These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15256#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1805 fasta sequence [CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC-CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT-TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT-GAATCATGCTATTGCAGATTTTGCCGAGGCATTG-GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC-GAAAAGTATGCCCGAGATGTTCAGGAAATCATTGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGTACAATATGGTAAGGAAAGCTGGCGGCCTCTGCATCGCCGACGAAGTTCAGGCGGGAGTCGCACGAACTGGAAGCCACTTCTGGGGATTTGAATCGCACGGCGTCATCCCAGACATAGTTACAATGGCAAAGGGTATAGGCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCCGCAGGAGCTACTTCAACACCTTCGGTGGCAACCCTGTCAGCACAGCCGGTGGCCATGCTGTTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACCTGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGAAAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGT-GATTTCGCAAAAAAAAAA] [+] EMBL CB646369 [CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAGGAAA ] [+] EMBL CB637285 [CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGTATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCTAGCAAAGAGGATA ] [+] EMBL CB638932 [CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGANAGTTGTTTTCTTCAC ] [+] EMBL CB676131 [ CGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGGCTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCCGCCGCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAAGAAA ] [+] EMBL BI305374 [ cttGCGGCCGCCGCCGCGCC CGCGCCGGAG ATGCCTTCGCCGGCGCCCCGAA ATGCCGCCGTTCGACTACACGCCGCCGCCGTACTACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGATCCTCAACCCCTCCCTCTTTCACTTATACGACCGCCCTTTGAACATACTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTGCCTGCATGCTTCTGGTGGCATTGCAACCGTTTGTGTGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGCTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAAGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCGCTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAANAGTATGCCCGAGATGTTCAGGACATCATTGATTTTGGAACTACANGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGT ] [+] EMBL CB633455 [ GCCGCGCC CGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGACTACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCGCTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAGGAAATCATTGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGTACAATATGGTAAGGAAAGCTGGC ] [+] EMBL AU069783 [ cgGCCACGCGCCGGAGAATNCCTTCGCCGCCGCCCCGAATATACCGCCGTTCGACNACACGCCGCCGCCGTACGACNGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAGTTCCTCANCCCCTCCCTCTTCCACTTCTACGANCGCCCTTTGAACATAGTCGATGGGAAAATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTANCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCTGGAATCATGCTATTGCAGATTTTNCCGAGGCATTGNGCA ] [+] EMBL AK060423 [ ACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAGGAAATCATTGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGTACAATATGGTAAGGAAAGCTGGCGGCCTCTGCATCGCCGACGAAGTTCAGGCGGGAGTCGCACGAACTGGAAGCCACTTCTGGGGATTTGAATCGCACGGCGTCATCCCAGACATAGTTACAATGGCAAAGGGTATAGGCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCCGCAGGAGCTACTTCAACACCTTCGGTGGCAACCCTGTCAGCACAGCCGGTGGCCATGCTGTTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACCTGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGAAAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCA ] [+] EMBL AF251070 [ ACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCAACCGTTTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGC GAAAAGTATGCCCGAGATGTTCAGGAAATCATTGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGGGTGGAATAGTGGAACTGGCACCAGGATACTTG ] [+] EMBL C26763 [ TTGT TGCGGGCACTGCCATCCGGATGTTGTTGAGGCGATGGTCAACCAAGCAAAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTTCACCATGCACTTAATCCAGACCCATATAGAG ] [+] EMBL OSR21171A [ AAGAGGATACAACACTCCACAGTTCTTTACCT GAATCATGCTATTGCAGATTTTGCCGAGGCATTG GCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCACTCAGGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGTTGGCGGAAAAGTATGCCCGAGA ] [-] EMBL CB646370 [ TACAATGGCAAAGGGTATAGGCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCCGCAGGAGCTACTTCAACACCTTCGGTGGCAACCCTGTCAGCACAGCCGGTGGCCATGCTGTTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACCTGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGAAAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAGCAATTATATTGGCAAATGTCAGT GATTTCGCAAAAAAAAAg] [-] EMBL CB633456 [ ACAATGGCAAAGGGTATAGGCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCCGCAGGAGCTACTTCAACACCTTCGGTGGCAACCCCGTCAGCACAGCCGGTGGCCATGCTGTTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACCTGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGAAAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATCTGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGCGACTTGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAGACAATTATATTGGCAAATGTCAGT GATTTCGCAAAAAAAAga] [-] EMBL CB638933 [ AAGAAGACACCGGCCAAAGTTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAG ] [-] EMBL CB637286 [ AGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAG ] [+] EMBL AU031844 [ GGGAAAGGTGGTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCGATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGT GATTTCGCAAAAAAAAAA] [+] EMBL OS1479A [ AGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGTGGATTTCGCAAt ] [+] EMBL AU070708 [ CACTATCGAAGCTGTGAGTCGGAGAGGGACTGGCAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGT GATTTCGCAAAAAAAAAA] [+] EMBL C96879 [ TCCTGCAAACCCNCCATNCGCTGNTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGNCCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTNCATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGNAAATGTTGAAACAATTATATTGGCAAATGNCAGT GATTNCGCAAAAA ] consensusID : consensus_15256#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 712 fasta sequence [CCCTCCTAAAGGAATAAGCTTGCGGCCGCCGCCGCGCCCGCGCCGGAGAATGCCTTCGCCGGCGGCCCAAAATGCCGCCGTTCGACTACACGCCGCCGCCGTACTACGGGCCGCGGGCTGAGGAGATCTTCCCGAAGCGGGCCGAGATCCTTAACCTCTCCCTCTTTCACTTATGCGACCGCCCTTTGAACATACTCGATGGGAAAATGCAATACCTGTTTTACCAGGATGGCCGCCGTTGCCTGCATGCTTCTGGTGGCATTGCACCCGTTTGTGTGCGGGCACTGCCATCCGGATGTTGTTGAGGCGGATGGTCAACCAAGCATAGAGGATACAACACTCCACAGTTCTTTACCTGAATCATGCTATTGCATATTTTGGCCAGGCATTGGCAGGCAAAATGCCTGGTGATCTGAAAGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAGCTAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCGCTCATGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGCGAAAAGTATGCCCGAGATGTTCAGGACATCATTGATTNTGGAACTACAGGAAGGGTCGGTGGT] [+] EMBL BI305244 [CCCTCCTAAAGGAATAAGCTTGCGGCCGCCGCCGCGCCCGCGCCGGAGAATGCCTTCGCCGGCGGCCCAAAATGCCGCCGTTCGACTACACGCCGCCGCCGTACTACGGGCCGCGGGCTGAGGAGATCTTCCCGAAGCGGGCCGAGATCCTTAACCTCTCCCTCTTTCACTTATGCGACCGCCCTTTGAACATACTCGATGGGAAAATGCAATACCTGTTTTACCAGGATGGCCGCCGTTGCCTGCATGCTTCTGGTGGCATTGCACCCGTTTGTGTGCGGGCACTGCCATCCGGATGTTGTTGAGGCGGATGGTCAACCAAGCATAGAGGATACAACACTCCACAGTTCTTTACCTGAATCATGCTATTGCATATTTTGGCCAGGCATTGGCAGGCAAAATGCCTGGTGATCTGAAAGTTGTTTTCTTCACAAATTCTGGCACGGAGGCGAGCTAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCATGACATTATTTCGCTCATGAATGGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAATGCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCATATAGAGGTGCTTTCGGTTCTGATGGCGAAAAGTATGCCCGAGATGTTCAGGACATCATTGATTNTGGAACTACAGGAAGGGTCGGTGGT] consensusID : consensus_15256#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 404 fasta sequence [CGCCCNACGCGCCCTTCTCCATTGGAGGCGNTGGGACATTTCANTATCCGAAGCTTTGANTCGGAGAGGGACTTGGCAGGATCANCCTGGTCCGCATGTGATCCGTATCCATAAATAATGGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGTGATTTCGCAATGATGTTGTGCAAAAAAAAAA] [+] EMBL AU091843 [CGCCCNACGCGCCCTTCTCCATTGGAGGCGNTGGGACATTTCANTATCCGAAGCTTTGANTCGGAGAGGGACTTGGCAGGATCANCCTGGTCCGCATGTGATCCGTATCCATAAATAATGGTTGGGGATTGGTGAGATAGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGTCCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCAATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGTGATTTCGCAATGATGTTGTGCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15256#0 CCCGCCGGGAAGGAAGCCAACGCCGACGCCGACATGCAGCGCCTCGCCTCCTCCCGGAGG 60 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 CTCCTCCAGGCGGCGCTCGCCCCTGTCCGTGCCCAGTCCAGCCTCTCCGCCGCGGCGGCC 120 consensus_15256#1 -------------------------------CCCTCCTAAAGGAATAAGCTT--GCGGCC 27 consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 GCCGCCGCGCCCGCGCCGGAGAATGCCTTCGCCGCCGCCCCGAAGATGCCGCCGTTCGAC 180 consensus_15256#1 GCCGCCGCGCCCGCGCCGGAGAATGCCTTCGCCGGCGGCCCAAA-ATGCCGCCGTTCGAC 86 consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 TACACGCCGCCGCCGTACGACGGGCCGCGGGCGGAGGAGATCTCCCGGAAGCGGGCCGAG 240 consensus_15256#1 TACACGCCGCCGCCGTACTACGGGCCGCGGGCTGAGGAGATCTTCCCGAAGCGGGCCGAG 146 consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 TTCCTCAGCCCCTCCCTCTTCCACTTCTACGACCGCCCTTTGAACATAGTCGATGGGAAA 300 consensus_15256#1 ATCCTTAACCTCTCCCTCTTTCACTTATGCGACCGCCCTTTGAACATACTCGATGGGAAA 206 consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 ATGCAGTACCTGTTCGACGAGGATGGCCGCCGTTACCTGGATGCTTTTGGTGGCATTGCA 360 consensus_15256#1 ATGCAATACCTGTTTTACCAGGATGGCCGCCGTTGCCTGCATGCTTCTGGTGGCATTGCA 266 consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 ACCGTTTGT-TGCGGGCACTGC-CATCCGGATGTTGTTGAGGCG-ATGGTCAACCAAGCA 417 consensus_15256#1 CCCGTTTGTGTGCGGGCACTGC-CATCCGGATGTTGTTGAGGCGGATGGTCAACCAAGCA 325 consensus_15256#2 --------------CGCCCNACGCGCCCTTCTCCATTGGAGGCGNTGGGACATTTCANTA 46 ** * * * ** * * ****** ** ** * * consensus_15256#0 AAGAGGATACAACACTCCACAGTTCTTTACCTGAATCATGCTATTGCAGATTTTGCCGAG 477 consensus_15256#1 TAGAGGATACAACACTCCACAGTTCTTTACCTGAATCATGCTATTGCATATTTTGGCCAG 385 consensus_15256#2 TCCGAAGCTTTGANTCGGAGAGGGACTTGGCAGGATCANCCTGGTCCGCATGTGATCC-- 104 * ** ** * * **** ** * * ** * * consensus_15256#0 GCATTGGCAGCCAAAATGCCTGGTGATCTGAAGGTTGTTTTCTTCACAAATTCTGGCACG 537 consensus_15256#1 GCATTGGCAGGCAAAATGCCTGGTGATCTGAAAGTTGTTTTCTTCACAAATTCTGGCACG 445 consensus_15256#2 GTATCCATAA--ATAATGGTTGGGGATTGGTGAGATAGCACCT---CGTTGTCTCGTAAT 159 * ** * * **** *** *** * * * ** * *** * * consensus_15256#0 GAGGCGAACGAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCAT-GACATTAT 596 consensus_15256#1 GAGGCGAGCTAGCTTGCACTGATGATTGCCCGGCTTTACACTGGTTGCCAT-GACATTAT 504 consensus_15256#2 ATGTCCTGCAAACC--CACCA-----TGCGCTGCTCAACACATGGTCCAATAGGCGCTCC 212 * * * * * *** *** * *** **** * * * ** * * * consensus_15256#0 TTCACTCAGGAAT-GGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAAT 655 consensus_15256#1 TTCGCTCATGAAT-GGATACCACGGGAATGCGGCTGGAACAATGGGTGCTACCGCTCAAT 563 consensus_15256#2 TCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCATGTCAATGTCAGAT 272 * * ** *** *** * ** * * * * * ** * * ** consensus_15256#0 GCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCAT 715 consensus_15256#1 GCAACTGGAAATTTAATGTTGTTCAGACGGGAGTGCACCATGCACTTAATCCAGACCCAT 623 consensus_15256#2 GTATTGTTATAGTTATTGTT-TACATGCTGAACGACAAAACGAACCAATCACA-----AT 326 * * * * *** **** * ** * * * ** * * ** * ** ** consensus_15256#0 ATAGAGGTGCTTTCGGTTCTGATGGCGAAAAGTATGCCCG-AGATGTTCAGGAAATCAT- 773 consensus_15256#1 ATAGAGGTGCTTTCGGTTCTGATGGCGAAAAGTATGCCCG-AGATGTTCAGGACATCAT- 681 consensus_15256#2 GCCCAGGCGATGTAAATGTTGA----AACAATTATATTGGCAAATGTCAGTGATTTCGCA 382 *** * * * * *** * ** *** * * **** ** ** consensus_15256#0 -TGATTTTGGAACTACAGGAAGGGTCGGTGGTTTCATTTCGGAAGCCATACAGGGAGTGG 832 consensus_15256#1 -TGATTNTGGAACTACAGGAAGGGTCGGTGGT---------------------------- 712 consensus_15256#2 ATGATGTTGTGCAAAAAAAAAA-------------------------------------- 404 **** ** * * ** consensus_15256#0 GTGGAATAGTGGAACTGGCACCAGGATACTTGCCTGCTGTGTACAATATGGTAAGGAAAG 892 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 CTGGCGGCCTCTGCATCGCCGACGAAGTTCAGGCGGGAGTCGCACGAACTGGAAGCCACT 952 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 TCTGGGGATTTGAATCGCACGGCGTCATCCCAGACATAGTTACAATGGCAAAGGGTATAG 1012 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 GCAATGGCATACCGATCGGAGCAGTCGTCACAACCCCTGAGATCGCTCAGGTGTTAACCC 1072 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 GCAGGAGCTACTTCAACACCTTCGGTGGCAACCCTGTCAGCACAGCCGGTGGCCATGCTG 1132 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 TTCTCAAGGTTCTGGAGAAGGAGAAGCTCCAGGAGAACGCATTTGTGGTTGGCTCCTACC 1192 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 TGAAGGAACGGCTCAACAAGCTGAAAGAGAAGCATGACATCATTGGTGATGTTAGAGGGA 1252 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 AAGGCTTCCTTCTTGGGGTTGAGCTGGTGACCGATCGCCAGAAGAAGACACCGGCCAAAG 1312 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 TTGAGATCGGTCATGTCATGAACCACATGAAAGACATGGGTGTGCTGGTTGGGAAAGGTG 1372 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 GTTTCTACGGGAACGTGTTCAGAGTAACACCTCCACTATGCTTCACCAAAGAGGACTCCG 1432 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 ATTTCTTCATTGAGGCGATGGACATTTCACTATCGAAGCTGTGAGTCGGAGAGGGACTGG 1492 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 CAGGATCAACCTGTCCGCATGTGATCCGTATCCATAAATAATGTTGGGGATTGGTGAGAT 1552 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 AGCACCTCGTTGTCTCGTAATATGTCCTGCAAACCCACCATGCGCTGCTCAACACATGGT 1612 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 CCAATAGGCGCTCCTCCGGTCTCTAATCAGATGTGTTGTGACTCGTGACCAATAAGCGCA 1672 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 TGTCAATGTCAGATGTATTGTTATAGTTATTGTTTACATGCTGAACGACAAAACGAACCA 1732 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 ATCACAATGCCCAGGCGATGTAAATGTTGAAACAATTATATTGGCAAATGTCAGTGATTT 1792 consensus_15256#1 ------------------------------------------------------------ consensus_15256#2 ------------------------------------------------------------ consensus_15256#0 CGCAAAAAAAAAA 1805 consensus_15256#1 ------------- consensus_15256#2 ------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||