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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1527#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3194 fasta sequence
[TTCGCTGATTTCTGCTCATTTCCAAACACATATACATTATTCACAGCTAGCACTGCAGTAATTAAGTAGCTAGCAGAGGGGCAGAGAGAGAGAGTGAGTGAGAAAGAGATCAAGATCATTATTATATATTGCATTTGATAATATATATATAATGGCGGATCAAACGCTGGGCGCCGTGGGGTCGCTGCTGGGTGTGTTGTCGAAGGTGGTGAAGGACGAGGCGAAGCTGCTGGGAGGCGTGGAGGGCGACATCCAGTTCATCAGGGACGAGATGGACAGCATGAACGGCTTCCTGGTGCACGTCACCAAGACGACCAACCACGACGACCAGCTCCGCGCCTGGATGAAGCAGGTCCGCGACATCACCTACGTCGCCGACGACTGCATCAAGCTCTACATGCGGGACGTCGTCCCGGAGGAGAAGGCTGGCCTCCGCGGCTGCCTCCTCCGCCGCGTGCCCAGCGTCTGCAAGCCCTACTGCTCGTTCCTCCACCGCAATCTCACGACCCGCGACCAGCTCGCGAGGAGGATCCACGAGCTCAAGGACCGGGTGCGCGAGATCAGCGAGAGGCGGCAGCGCTACGACGTCAAGCTCCCCGAAGGCGATGCGGTCCAGTCCCCGCCGGTGTCCCAGGACAGGAAGACGAAGGAGAAGAGGGACGAGTTCGTACGTGCCCTCGAAGATGGCCAGTCTCCTTTCCGAGACGCGGTCCGCAAGCTCTCCAGCGGTGATGGTGGTGCCCTGATCAGAGACCGTGCTGCTCCTGCACTCGTACGTAGCATCGTCGACACATGCATAACGAAGCTGGCCGATGACCATGACCGCATCATCAAGATGCTGCTTCGTTCTCTGTACGCCCATCCCTGTGGGACAAAAGAACTGGAGAACTTGTCCAACAAGCTCAGAGAAGGAGAAGATGTGGCCAAGCAAGTGATGCTTTTCTGCTACAGCAAGCTGTCTGTGCACTACAAGAGCTGCCTGCAGTATCTGATCACCTTCGAACTAGAGGAAAGCATCAGCAGGACAAGCTTGGTGAGGAGGTGGCTCGCCGAAGGCCTAGTGCTCAATGACCAACAACAACATGGGATAGATGATGATGAAAGCATGGAAGAGGCCGGTGAGCGCTGCTTCGATGATCTCCTGTTTCGGGGCTTCCTTTCTCCTGCCCCTGCACATCGTTTTCCGAGGACCGGCGGCCTCAAGCTCAAGGGCTGCGTTCTTGATGCTTCAGTCAAGACGTTCATCTACGATATGTCCACAAGCGAGAATTTTTTGGATGACCTGCCAACTCACCTTCGGCATCAGATTAATATCAGAAAGACGGCTCGGCGGCGGGAGCTGCCACAGAAGCAGCACCAGCACAAACTACGGTGGACGCAGTCGACCATCTGCTGCTGCTACTGCAGGGTTCCAAGAATAATGAAGGCAACAACAGCTGACGCTGGAGGCAGCAACATCAATGATCCGCTGCTGCCGCTTCACCATCCCATGGATGAGATAGTAACTCTCCTCAAAACCCTACCTCCGGAGTACCGTCTCAATGTGCTGGATCTAGGAGGTTGCCTTGGGTTGAAGATGAGCCACCTAAAGAACATCTGCAAGCTGGTGCCGTCGCTCAAGTATCTGAGCCTCCGGAAGACCAATGTTTCTCAGCTTCCAAAGAAGATGAACCGACTCCTGCATCTGGAGACGCTCGACATCAGGGACACCAACGTGCGGGGTGCAGCTATGAGGGATATCTTCCTCAATGAGCTGAAGCATCTCCTTGTCGGCCGCATATTTATTCCTGATGCTGCCGCCGGCGACAATGAGGCATCAGCACTACTCTCCACCGTGCTGATGCCTCCTAAGATCAGCAAGAACACGGAGATATTGCGCCATATCCAGATCAAGGATGGCCCAGAAGCCCAGCTCCAGCTTTCGCATGTCGCGTCTCTGGATGGGCTAAGGAAGCTGGGGGTGGTCCTCGACGGCAGGGAAGATAACATCAAGCTTTTGCTCACCACAATTGCCAGGCGGAGTGATACCCTGCGATCACTATCAGTCTGGATCACCGAGCCGCCGCCGGAGCACAGTGTCACTGGTGAACGCCACGGCGTTTTCGTGACTCTCGACCACAAGGAGAAGGCGACCACATTGTTCTCGCATCCCAGTAAACTTGAGAGCTTAAACCTCAAGTGCTACAAGGGAAAAAACAACAACAACAACTACAATATTCCTCCATGGATCATAAGCCTCCAAAAGCTCTCCAAGATCACTCTACGTCACAGCTTACTTTCCAGAGGTGGTCTGAGAGAGCTTGGCAAGATGAAGAGCTTGCGCTGCCTCAAGCTCCGTCAGGAATCATATATCGAAGCCGACGTCACCGTGAAGTACGGGGAGTTCGAGGACCTCAGGCTTCTTGTGATTGATAAGATCTCCAACAAGATGACCAAACTTGTCTTCGAAGAAGATGCAGCTCCCAAGCTGGAGAAGATTGTCTGGAACTTCGACACGATGACAACGCTGATGGGGATCACGGTAAACAACATCAAAGGGATCGAAAATCTTCAAAACTTGAAGGAGCTATGGATCAACGGCGTCAACATACCGTTTCCTTCAAGATCCCGTGAATGGAAGGATATAACCACAGTTCCGCAGAAATTATGGAGGCACACTTTTGGACCGGTAATTGAAAGCTTAGCATCTGAAAGCTGAGACGTTTCTTCTACCTCCATCCTGTAAGGTGAGCTATATATGTTCTTTCTCTCATCCGCGATTGAACTCATCGATGAGCCTCCTCCATGCCACATTTGCCTTCTCCGTCTGTCTGCTAGTGCCACCATATCCATTGCCACCCCTTGATCTCTCACCTGCTGCCTCCTAACCACTATGTTTACCTTATTCCTGTTGCTGACCCTGCCCACCATGGATTCACCCACCCACCAGCAGCTACATGAGCCGCTGGATATATATCACTCCAATGAAGTGTCTTATATATAAGAATTTCTCATCAGTTCCCTGAGAAATAACAAAGCCGGAAGAAAAAAGACCGATCTATCGCTGATGCACTACTTAATATCCTGCCTATGTTTTTTATGTGAATTCTGTAACGTGATGCCATGTCTGTGTGTGTTGCTGTTCAACATGACAATGTATATATATCATGCATGTACTTATCGCACCTACTGAAATATATACTGTAATGTATTGG]
[+] EMBL AK119392 [TTCGCTGATTTCTGCTCATTTCCAAACACATATACATTATTCACAGCTAGCACTGCAGTAATTAAGTAGCTAGCAGAGGGGCAGAGAGAGAGAGTGAGTGAGAAAGAGATCAAGATCATTATTATATATTGCATTTGATAATATATATATAATGGCGGATCAAACGCTGGGCGCCGTGGGGTCGCTGCTGGGTGTGTTGTCGAAGGTGGTGAAGGACGAGGCGAAGCTGCTGGGAGGCGTGGAGGGCGACATCCAGTTCATCAGGGACGAGATGGACAGCATGAACGGCTTCCTGGTGCACGTCACCAAGACGACCAACCACGACGACCAGCTCCGCGCCTGGATGAAGCAGGTCCGCGACATCACCTACGTCGCCGACGACTGCATCAAGCTCTACATGCGGGACGTCGTCCCGGAGGAGAAGGCTGGCCTCCGCGGCTGCCTCCTCCGCCGCGTGCCCAGCGTCTGCAAGCCCTACTGCTCGTTCCTCCACCGCAATCTCACGACCCGCGACCAGCTCGCGAGGAGGATCCACGAGCTCAAGGACCGGGTGCGCGAGATCAGCGAGAGGCGGCAGCGCTACGACGTCAAGCTCCCCGAAGGCGATGCGGTCCAGTCCCCGCCGGTGTCCCAGGACAGGAAGACGAAGGAGAAGAGGGACGAGTTCGTACGTGCCCTCGAAGATGGCCAGTCTCCTTTCCGAGACGCGGTCCGCAAGCTCTCCAGCGGTGATGGTGGTGCCCTGATCAGAGACCGTGCTGCTCCTGCACTCGTACGTAGCATCGTCGACACATGCATAACGAAGCTGGCCGATGACCATGACCGCATCATCAAGATGCTGCTTCGTTCTCTGTACGCCCATCCCTGTGGGACAAAAGAACTGGAGAACTTGTCCAACAAGCTCAGAGAAGGAGAAGATGTGGCCAAGCAAGTGATGCTTTTCTGCTACAGCAAGCTGTCTGTGCACTACAAGAGCTGCCTGCAGTATCTGATCACCTTCGAACTAGAGGAAAGCATCAGCAGGACAAGCTTGGTGAGGAGGTGGCTCGCCGAAGGCCTAGTGCTCAATGACCAACAACAACATGGGATAGATGATGATGAAAGCATGGAAGAGGCCGGTGAGCGCTGCTTCGATGATCTCCTGTTTCGGGGCTTCCTTTCTCCTGCCCCTGCACATCGTTTTCCGAGGACCGGCGGCCTCAAGCTCAAGGGCTGCGTTCTTGATGCTTCAGTCAAGACGTTCATCTACGATATGTCCACAAGCGAGAATTTTTTGGATGACCTGCCAACTCACCTTCGGCATCAGATTAATATCAGAAAGACGGCTCGGCGGCGGGAGCTGCCACAGAAGCAGCACCAGCACAAACTACGGTGGACGCAGTCGACCATCTGCTGCTGCTACTGCAGGGTTCCAAGAATAATGAAGGCAACAACAGCTGACGCTGGAGGCAGCAACATCAATGATCCGCTGCTGCCGCTTCACCATCCCATGGATGAGATAGTAACTCTCCTCAAAACCCTACCTCCGGAGTACCGTCTCAATGTGCTGGATCTAGGAGGTTGCCTTGGGTTGAAGATGAGCCACCTAAAGAACATCTGCAAGCTGGTGCCGTCGCTCAAGTATCTGAGCCTCCGGAAGACCAATGTTTCTCAGCTTCCAAAGAAGATGAACCGACTCCTGCATCTGGAGACGCTCGACATCAGGGACACCAACGTGCGGGGTGCAGCTATGAGGGATATCTTCCTCAATGAGCTGAAGCATCTCCTTGTCGGCCGCATATTTATTCCTGATGCTGCCGCCGGCGACAATGAGGCATCAGCACTACTCTCCACCGTGCTGATGCCTCCTAAGATCAGCAAGAACACGGAGATATTGCGCCATATCCAGATCAAGGATGGCCCAGAAGCCCAGCTCCAGCTTTCGCATGTCGCGTCTCTGGATGGGCTAAGGAAGCTGGGGGTGGTCCTCGACGGCAGGGAAGATAACATCAAGCTTTTGCTCACCACAATTGCCAGGCGGAGTGATACCCTGCGATCACTATCAGTCTGGATCACCGAGCCGCCGCCGGAGCACAGTGTCACTGGTGAACGCCACGGCGTTTTCGTGACTCTCGACCACAAGGAGAAGGCGACCACATTGTTCTCGCATCCCAGTAAACTTGAGAGCTTAAACCTCAAGTGCTACAAGGGAAAAAACAACAACAACAACTACAATATTCCTCCATGGATCATAAGCCTCCAAAAGCTCTCCAAGATCACTCTACGTCACAGCTTACTTTCCAGAGGTGGTCTGAGAGAGCTTGGCAAGATGAAGAGCTTGCGCTGCCTCAAGCTCCGTCAGGAATCATATATCGAAGCCGACGTCACCGTGAAGTACGGGGAGTTCGAGGACCTCAGGCTTCTTGTGATTGATAAGATCTCCAACAAGATGACCAAACTTGTCTTCGAAGAAGATGCAGCTCCCAAGCTGGAGAAGATTGTCTGGAACTTCGACACGATGACAACGCTGATGGGGATCACGGTAAACAACATCAAAGGGATCGAAAATCTTCAAAACTTGAAGGAGCTATGGATCAACGGCGTCAACATACCGTTTCCTTCAAGATCCCGTGAATGGAAGGATATAACCACAGTTCCGCAGAAATTATGGAGGCACACTTTTGGACCGGTAATTGAAAGCTTAGCATCTGAAAGCTGAGACGTTTCTTCTACCTCCATCCTGTAAGGTGAGCTATATATGTTCTTTCTCTCATCCGCGATTGAACTCATCGATGAGCCTCCTCCATGCCACATTTGCCTTCTCCGTCTGTCTGCTAGTGCCACCATATCCATTGCCACCCCTTGATCTCTCACCTGCTGCCTCCTAACCACTATGTTTACCTTATTCCTGTTGCTGACCCTGCCCACCATGGATTCACCCACCCACCAGCAGCTACATGAGCCGCTGGATATATATCACTCCAATGAAGTGTCTTATATATAAGAATTTCTCATCAGTTCCCTGAGAAATAACAAAGCCGGAAGAAAAAAGACCGATCTATCGCTGATGCACTACTTAATATCCTGCCTATGTTTTTTATGTGAATTCTGTAACGTGATGCCATGTCTGTGTGTGTTGCTGTTCAACATGACAATGTATATATATCATGCATGTACTTATCGCACCTACTGAAATATATACTGTAATGTATTGG]
consensusID : consensus_1527#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2776 fasta sequence
[AGATCAAGATCAAGATCAAGATCAGCTTGAATTGTTTTTAGCTTTTCCTGCAGCTATCTCCTACCGTCGTTCTCCTCAAAAAAAAGATCAAGATAGAGAGGTATATCATAAGATAATTGCATCCTACGACAATGGCGCACCTGACGAACGGCGCGGTGGACTCGCTGCTGGGTGTGTTGTCGAAGGTGGTGAAGGACGAGGCGAAGCTGCTGGGAGGCGTGGAGGGCGACATCCAGTTCATCAGGGACGAGATGGACAGCATGAACGGCTTCCTCCTCCACTTCACCAAGTCCAAGACGCCGCACAACGACCAGCTCCGCGCCTGGATGAAGCAGGTCCGCGACGTCACCTACGTCGCCGACGACTGCATCAGCCTCTACATGCGCGACCTCATCCCGCCGGAGGCCGGCCTCTGGCCGTGGCTCCGCCACATCCCCAAGCGCCTCCGCACGATTCCGGCCCGCCACCGCCTCGCCAACAAGATCCACAAGCTCAAGGACCGCGTGCGCGAGGTCGGCGAGAGGCGCCTGCGCTACGACGTCAAGCTCCCAGAACTACACAATTCGGAGGAGTCGTCGTCGTTGCTGGTCGCCCGAGACAGCAAGGTCGAGGAGAAGAGGGACGAATTCCTACGTGCCATCGACCATGTCCACCATGCTCCTCCTTCACCTTCAGCGATCGAGATGCTCCCTCTTGATCTTGGAAAGGATGCTCTCGAACACCTACATGATATCAAGAAATGCCTCGATGGGGGTCATGTCGCCAGCATGAAGATGCTGCTTCGTGCTCTGTATGCCTATCCCTACGGTACCATAGAAGAATTGAAAGACTTATCCAACAGTCTTAAGATTAAAGGAGCAGATGTGGCCAAATTGGTGATGATTTTCTGCTACAGCAAGCTGCCCACGCATTGCAAGAGCTGCCTGCAGTACCTGGCTGCCATGGGAGAGGAAGATAAAATCAATAGGGCGTGCTTGGTCAGGCGATGGGTCGCCGAGGGCCTCCTGCCCCTCAGGGTCGTCGAACCGCCTCTTACCACCACCATGGAAGAAGCCGGCGAACTCTGCTTCAAGGAGCTCGTCTTTCGAGGCTTTCTTCTTCCTGCTCCTTCTCCTACAGATCATCCTCAAGATGACGATGTAGCTGTTGGTACATGCAGCCTAAATCTCAAGAGCTGTGTCGTTGATAATGCAGTCAAGAAATTCATCCCCGACATCTCCAAGAGCGATAATTTTGTGGTTGACCTGCCTACCCACCTTCAGCTTCAGCTCAAAATCAGACATATGGTTCGATCGACCTTTCCTGCAACTGCGTCAGCAGAAGAGAAACAGCAACCACAGCAGCAGCTGAATCCCATGGATGGGATGGTGAAGCTCCTCAAGGAGTTACCTGAAGAGTATCGGCTGAACGTGATAGATCTAGGGGGCTGCCAGAGATTGGAGAAGAGCCACCTCAAGAGTATCTGCAAGGTGACCTCCCTCAAGTATCTGAGCCTCCGGAACACCGACGTTTCCAGTCTGCCCAAGAAGATGGAGGACTTGTGGCAGCTGGAGACGCTCGATATCCGGGACACCAAAAAGATGCCGGCCACCGCCATGAGGCGCATCTACCTCCTCAACCTGAAGCATCTCCTTGCCGGCAACAACATCAATACCGACGGCGGTGGCGAAGGCAAGAAAAATGAGTCAGGCTCCACCGTGCTGGTACCTCACAGGATCGGGAAGAAGACGGAGACATTGCGCCATGTCCGGATTAAGGACGGCCAAGCCGACCTTGCACGGATTGGGTCTCTAGAGCAGCTGAGGAAGTTGGGAGTCGTCCTCGACGGCAGCCAAGGTAACATCACTCATTTGCTTGAAGCAATCTCCAAGCGGAGAGATACCCTGCGCTCACTGTCAGTCTGGATCACGGAGCCACCGCCACCGCCGGCTGCGGAGCACATGGCCGGCGACGACGTGTTCGTGACTCTTGACCATTCACAAGAAGAAATCCTAGCTCCCAGTAAACTTGAGAGCTTAGACCTCAACCTCAAGTGCTTCTTCAAGGGAGGAAATGGCGGCGACAAGAGAGGCTACAAGCTCCCTACATGGATCAACGAAAAGTTCCAAGCGCTTTCCAAGATCACTCTACGTTACACCCTACTGCGCGACGACGGTCTGCGGATCCTCGGCAAGCTGAAGAGCTTGCGCTGCCTCAGGCTGCTTCGCAAATCATACATCGAAAGCGAGGTCACCCTCGAGGAGGGGGAGTTCGGGGAGCTGAGGCTCCTCCTGCTTGATCATGTCTCTGATAAGACGGCCTTGTTGATCAAAGCCCGTGCAGCTCCCAAGCTGGAGAAGATTGTGTGGAACTTGAACAAGACGAAGACGTTGGTGACGATCTCCCCCGACGACATTGCTGGGATCAATAACACGGCCATACTTCGCTTCAAGGCCGCCGATGCAGCAGCTCCTACGAAGGAGAAGGTTGACTGGAACTGCAACAGCACGAGGAAGATCACTCCGGACATCATCCGGGGTTCAATCGAATTCAATCAAGTCCAAGAGGGAGCTCAAGAATTCCTCAAGTAAGTCCGAGGGAGCTCAAGATCTCATGAAGTGCGTGTTCCCCTTACCACGCGATCGATCTATATACGTTGCTTCATCACAGTAGAAGGAGACCAGAATGTGGAAAGAATAATTAAATGAAGACCTACTTACATATTTCTATCTGGCCGGTTCTGGTAAGAATTAATAATCGCAAGTTCACTGCCGCGTGTATATATATTCATTATATT]
[+] EMBL AK119407 [AGATCAAGATCAAGATCAAGATCAGCTTGAATTGTTTTTAGCTTTTCCTGCAGCTATCTCCTACCGTCGTTCTCCTCAAAAAAAAGATCAAGATAGAGAGGTATATCATAAGATAATTGCATCCTACGACAATGGCGCACCTGACGAACGGCGCGGTGGACTCGCTGCTGGGTGTGTTGTCGAAGGTGGTGAAGGACGAGGCGAAGCTGCTGGGAGGCGTGGAGGGCGACATCCAGTTCATCAGGGACGAGATGGACAGCATGAACGGCTTCCTCCTCCACTTCACCAAGTCCAAGACGCCGCACAACGACCAGCTCCGCGCCTGGATGAAGCAGGTCCGCGACGTCACCTACGTCGCCGACGACTGCATCAGCCTCTACATGCGCGACCTCATCCCGCCGGAGGCCGGCCTCTGGCCGTGGCTCCGCCACATCCCCAAGCGCCTCCGCACGATTCCGGCCCGCCACCGCCTCGCCAACAAGATCCACAAGCTCAAGGACCGCGTGCGCGAGGTCGGCGAGAGGCGCCTGCGCTACGACGTCAAGCTCCCAGAACTACACAATTCGGAGGAGTCGTCGTCGTTGCTGGTCGCCCGAGACAGCAAGGTCGAGGAGAAGAGGGACGAATTCCTACGTGCCATCGACCATGTCCACCATGCTCCTCCTTCACCTTCAGCGATCGAGATGCTCCCTCTTGATCTTGGAAAGGATGCTCTCGAACACCTACATGATATCAAGAAATGCCTCGATGGGGGTCATGTCGCCAGCATGAAGATGCTGCTTCGTGCTCTGTATGCCTATCCCTACGGTACCATAGAAGAATTGAAAGACTTATCCAACAGTCTTAAGATTAAAGGAGCAGATGTGGCCAAATTGGTGATGATTTTCTGCTACAGCAAGCTGCCCACGCATTGCAAGAGCTGCCTGCAGTACCTGGCTGCCATGGGAGAGGAAGATAAAATCAATAGGGCGTGCTTGGTCAGGCGATGGGTCGCCGAGGGCCTCCTGCCCCTCAGGGTCGTCGAACCGCCTCTTACCACCACCATGGAAGAAGCCGGCGAACTCTGCTTCAAGGAGCTCGTCTTTCGAGGCTTTCTTCTTCCTGCTCCTTCTCCTACAGATCATCCTCAAGATGACGATGTAGCTGTTGGTACATGCAGCCTAAATCTCAAGAGCTGTGTCGTTGATAATGCAGTCAAGAAATTCATCCCCGACATCTCCAAGAGCGATAATTTTGTGGTTGACCTGCCTACCCACCTTCAGCTTCAGCTCAAAATCAGACATATGGTTCGATCGACCTTTCCTGCAACTGCGTCAGCAGAAGAGAAACAGCAACCACAGCAGCAGCTGAATCCCATGGATGGGATGGTGAAGCTCCTCAAGGAGTTACCTGAAGAGTATCGGCTGAACGTGATAGATCTAGGGGGCTGCCAGAGATTGGAGAAGAGCCACCTCAAGAGTATCTGCAAGGTGACCTCCCTCAAGTATCTGAGCCTCCGGAACACCGACGTTTCCAGTCTGCCCAAGAAGATGGAGGACTTGTGGCAGCTGGAGACGCTCGATATCCGGGACACCAAAAAGATGCCGGCCACCGCCATGAGGCGCATCTACCTCCTCAACCTGAAGCATCTCCTTGCCGGCAACAACATCAATACCGACGGCGGTGGCGAAGGCAAGAAAAATGAGTCAGGCTCCACCGTGCTGGTACCTCACAGGATCGGGAAGAAGACGGAGACATTGCGCCATGTCCGGATTAAGGACGGCCAAGCCGACCTTGCACGGATTGGGTCTCTAGAGCAGCTGAGGAAGTTGGGAGTCGTCCTCGACGGCAGCCAAGGTAACATCACTCATTTGCTTGAAGCAATCTCCAAGCGGAGAGATACCCTGCGCTCACTGTCAGTCTGGATCACGGAGCCACCGCCACCGCCGGCTGCGGAGCACATGGCCGGCGACGACGTGTTCGTGACTCTTGACCATTCACAAGAAGAAATCCTAGCTCCCAGTAAACTTGAGAGCTTAGACCTCAACCTCAAGTGCTTCTTCAAGGGAGGAAATGGCGGCGACAAGAGAGGCTACAAGCTCCCTACATGGATCAACGAAAAGTTCCAAGCGCTTTCCAAGATCACTCTACGTTACACCCTACTGCGCGACGACGGTCTGCGGATCCTCGGCAAGCTGAAGAGCTTGCGCTGCCTCAGGCTGCTTCGCAAATCATACATCGAAAGCGAGGTCACCCTCGAGGAGGGGGAGTTCGGGGAGCTGAGGCTCCTCCTGCTTGATCATGTCTCTGATAAGACGGCCTTGTTGATCAAAGCCCGTGCAGCTCCCAAGCTGGAGAAGATTGTGTGGAACTTGAACAAGACGAAGACGTTGGTGACGATCTCCCCCGACGACATTGCTGGGATCAATAACACGGCCATACTTCGCTTCAAGGCCGCCGATGCAGCAGCTCCTACGAAGGAGAAGGTTGACTGGAACTGCAACAGCACGAGGAAGATCACTCCGGACATCATCCGGGGTTCAATCGAATTCAATCAAGTCCAAGAGGGAGCTCAAGAATTCCTCAAGTAAGTCCGAGGGAGCTCAAGATCTCATGAAGTGCGTGTTCCCCTTACCACGCGATCGATCTATATACGTTGCTTCATCACAGTAGAAGGAGACCAGAATGTGGAAAGAATAATTAAATGAAGACCTACTTACATATTTCTATCTGGCCGGTTCTGGTAAGAATTAATAATCGCAAGTTCACTGCCGCGTGTATATATATTCATTATATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1527#0 TTCGCTGATTTCTGCTCATTTCCAAACACATATACATTATTCACAGCTAGCACTGCAGTA 60
consensus_1527#1 -----AGATCAAGATCAAGATCAAGATCAGCTTGAATTGTTTTTAGCTTTTCCTGCAGCT 55
*** * ** * * * *** ** **** ******
consensus_1527#0 ATTAAGTAGCTAGCAGAGGGGCAGAGAGAGAGAGTGAGTGAGAAAGAGATCAAGATCATT 120
consensus_1527#1 ATCTCCTA-CCGTCGTTCTCCTCAAAAAAAAGATCAAGATAGAGAGGTAT----ATCATA 110
** ** * * * * * *** ** *** ** ** *****
consensus_1527#0 ATTATATATTGCATTTGATAATATATATATAATGGCGGATCAAACGCTGGGCGCCGTGGG 180
consensus_1527#1 AG-ATA-ATTGCATCCTACGA--------CAATGGCGCACCTGACGAACGGCGCGGTGGA 160
* *** ******* * * ******* * * *** ***** ****
consensus_1527#0 GTCGCTGCTGGGTGTGTTGTCGAAGGTGGTGAAGGACGAGGCGAAGCTGCTGGGAGGCGT 240
consensus_1527#1 CTCGCTGCTGGGTGTGTTGTCGAAGGTGGTGAAGGACGAGGCGAAGCTGCTGGGAGGCGT 220
***********************************************************
consensus_1527#0 GGAGGGCGACATCCAGTTCATCAGGGACGAGATGGACAGCATGAACGGCTTCCTGGTGCA 300
consensus_1527#1 GGAGGGCGACATCCAGTTCATCAGGGACGAGATGGACAGCATGAACGGCTTCCTCCTCCA 280
****************************************************** * **
consensus_1527#0 CGTCACCAAGAC---GACCAACCACGACGACCAGCTCCGCGCCTGGATGAAGCAGGTCCG 357
consensus_1527#1 CTTCACCAAGTCCAAGACGCCGCACAACGACCAGCTCCGCGCCTGGATGAAGCAGGTCCG 340
* ******** * *** *** **********************************
consensus_1527#0 CGACATCACCTACGTCGCCGACGACTGCATCAAGCTCTACATGCGGGACGTCGTCCCGGA 417
consensus_1527#1 CGACGTCACCTACGTCGCCGACGACTGCATCAGCCTCTACATGCGCGACCTCATCCCGCC 400
**** *************************** *********** *** ** *****
consensus_1527#0 GGAGAAGGCTGGCCTCCGCGGCTGCCTCCTCCGCCGCGTGCCCAGCGTCTGCAAGCCCTA 477
consensus_1527#1 GG---AGGCCGGCCTCTG--GCCGTGGC-TCCGCCACATCCCCA---------AGCGCCT 445
** **** ****** * ** * * ****** * * **** *** *
consensus_1527#0 CTGCTCGTTCCTCCACCGCAATCTCACGACCCGCGACCAGCTCGCGAGGAGGATCCACGA 537
consensus_1527#1 CCGCACGATTC---------------CGGCCCGCCACCGCCTCGCCAACAAGATCCACAA 490
* ** ** * * ** ***** *** ***** * * ******* *
consensus_1527#0 GCTCAAGGACCGGGTGCGCGAGATCAGCGAGAGGCGGCAGCGCTACGACGTCAAGCTCCC 597
consensus_1527#1 GCTCAAGGACCGCGTGCGCGAGGTCGGCGAGAGGCGCCTGCGCTACGACGTCAAGCTCCC 550
************ ********* ** ********** * *********************
consensus_1527#0 CGAAG---GCGATGCGGTCCAGTCCCCGCCGGTGT------CCCAGGACAGGAAGACGAA 648
consensus_1527#1 AGAACTACACAATTCGGAGGAGTCGTCGTCGTTGCTGGTCGCCCGAGACAGCAAGGTCGA 610
*** * ** *** **** ** ** ** *** ***** *** *
consensus_1527#0 GGAGAAGAGGGACGAGTTCGTACGTGCCCTCGAAGATGGCCAGTCTCCTTTCCGAGACGC 708
consensus_1527#1 GGAGAAGAGGGACGAATTCCTACGTGCCATCGACCATGTCCACCATGCTCCTC------- 663
*************** *** ******** **** *** *** * ** *
consensus_1527#0 GGTCCGCAAGCTCTCCAGCGGTGATGGTGGTGCCC--TGATCAGAGACCGTGCTGCTCCT 766
consensus_1527#1 -CTTCAC-----CTTCAGCGATCGAGATGCTCCCTCTTGATCTTGGAAAG-GATGCTCTC 716
* * * ** ***** * * ** * ** ***** ** * * *****
consensus_1527#0 GCACTCGTACGTAGCATCGTCGACACATGCATAACGAAGCTGGCCGATGACCATGACCGC 826
consensus_1527#1 GAACACCTACATGATATC---AAGAAATGC---------CTCGATGGGGGTCATGTCGCC 764
* ** * *** * *** * * **** ** * * * **** * *
consensus_1527#0 ATCATCAAGATGCTGCTTCGTTCTCTGTACGCCCATCCCTGTGGGAC---AAAAGAACTG 883
consensus_1527#1 AGCATGAAGATGCTGCTTCGTGCTCTGTATGCCTATCCCTACGGTACCATAGAAGAATTG 824
* *** *************** ******* *** ****** ** ** * ***** **
consensus_1527#0 GAGAACTTGTCCAACAAGCTCAGAG---AAGGAGAAGATGTGGCCAAGCAAGTGATGCTT 940
consensus_1527#1 AAAGACTTATCCAACAGTCTTAAGATTAAAGGAGCAGATGTGGCCAAATTGGTGATGATT 884
* **** ******* ** * ****** ************ ****** **
consensus_1527#0 TTCTGCTACAGCAAGCTGTCTGTGCACTACAAGAGCTGCCTGCAGTATCTGATCACCTTC 1000
consensus_1527#1 TTCTGCTACAGCAAGCTGCCCACGCATTGCAAGAGCTGCCTGCAGTACCTGGCTGCCATG 944
****************** * *** * ****************** *** ** *
consensus_1527#0 GAACTAGAGGAAAGCATCAGCAGGACAAGCTTGGTGAGGAGGTGGCTCGCCGAAGGCCTA 1060
consensus_1527#1 GGAGAGGAAGATAAAATCAATAGGGCGTGCTTGGTCAGGCGATGGGTCGCCGAGGGCCTC 1004
* * ** ** * **** *** * ******* *** * *** ******* *****
consensus_1527#0 GTGCTCAATGACCAACAACAACATGGGATAGATGATGATGAA-AGCATGGAAGAGGCCGG 1119
consensus_1527#1 CTGC-------CCCTCAGGGTCGTCGAACCGCCTCTTACCACCACCATGGAAGAAGCCGG 1057
*** ** ** * * * * * * * * * ********* *****
consensus_1527#0 TGAGCGCTGCTTCGATGATCTCCTGTTTCGGGGCTTCCTTTCTCCTGCCCCT------GC 1173
consensus_1527#1 CGAACTCTGCTTCAAGGAGCTCGTCTTTCGAGGCTTTCTTCTTCCTGCTCCTTCTCCTAC 1117
** * ******* * ** *** * ***** ***** *** ****** *** *
consensus_1527#0 ACATCGTTTTC-------CGAGG-----------ACCGGCGGCCTCAAGCTCAAGGGCTG 1215
consensus_1527#1 AGATCATCCTCAAGATGACGATGTAGCTGTTGGTACATGCAGCCTAAATCTCAAGAGCTG 1177
* *** * ** *** * ** ** **** ** ****** ****
consensus_1527#0 CGTTCTTGATGCTTCAGTCAAGACGTTCATCTACGATATGTCCACAAGCGAGAATTTTTT 1275
consensus_1527#1 TGTCGTTGATAATGCAGTCAAGAAATTCATCCCCGACATCTCCAAGAGCGATAATTTTGT 1237
** ***** * ********* ****** *** ** **** ***** ****** *
consensus_1527#0 GGATGACCTGCCAACTCACCTTCGGCATCAGATTAATATCAGAAAGACGGCTCGGCGGCG 1335
consensus_1527#1 GGTTGACCTGCCTACCCACCTTCAGCTTCAGCTCAAAATCAGACATATGGTTCGA----- 1292
** ********* ** ******* ** **** * ** ****** * * ** ***
consensus_1527#0 GGAGCTGCCACAGAAGCAGCACCAGCACAAACTACGGTGGACGCAGTCGACCATCTGCTG 1395
consensus_1527#1 ----------------------------------------------TCGACCTTTC---- 1302
****** *
consensus_1527#0 CTGCTACTGCAGGGTTCCAAGAATAATGAAGGCAACAACAGCTGACGCTGGAGGCAGCAA 1455
consensus_1527#1 CTGCAACTGC---GTCAGCAGAAGAGAAACAGCAACCACAGCAGCAGCTGAA-------- 1351
**** ***** ** **** * * ***** ***** * **** *
consensus_1527#0 CATCAATGATCCGCTGCTGCCGCTTCACCATCCCATGGATGAGATAGTAACTCTCCTCAA 1515
consensus_1527#1 ------------------------------TCCCATGGATGGGATGGTGAAGCTCCTCAA 1381
*********** *** ** * ********
consensus_1527#0 AACCCTACCTCCGGAGTACCGTCTCAATGTGCTGGATCTAGGAGGTTGCCTTGGGTTGAA 1575
consensus_1527#1 GGAGTTACCTGAAGAGTATCGGCTGAACGTGATAGATCTAGGGGGCTGCCAGAGATTGGA 1441
***** ***** ** ** ** *** * ******** ** **** * *** *
consensus_1527#0 GATGAGCCACCTAAAGAACATCTGCAAGCTGGTGCCGTCGCTCAAGTATCTGAGCCTCCG 1635
consensus_1527#1 GAAGAGCCACCTCAAGAGTATCTGCAAG---GTGACCTCCCTCAAGTATCTGAGCCTCCG 1498
** ********* **** ********* *** * ** ********************
consensus_1527#0 GAAGACCAATGTTTCTCAGCTTCCAAAGAAGATGAACCGACTCCTGCATCTGGAGACGCT 1695
consensus_1527#1 GAACACCGACGTTTCCAGTCTGCCCAAGAAGATGGAGGACTTGTGGCAGCTGGAGACGCT 1558
*** *** * ***** ** ** ********* * * *** ***********
consensus_1527#0 CGACATCAGGGACACCAACG---TGCGGGGTGCAGCTATGAGGGATATCTTCCTCAATGA 1752
consensus_1527#1 CGATATCCGGGACACCAAAAAGATGCCGGCCACCGCCATGAGGCGCATCTACCTCCTCAA 1618
*** *** ********** *** ** * ** ****** **** **** *
consensus_1527#0 GCTGAAGCATCTCCTTGTCGGCCGCATATTTATTCCTGATGCTGCCGCCGGCGACAATGA 1812
consensus_1527#1 CCTGAAGCATCTCCTTGCCGGCAACAACATCAATACCGACGGCGGTGGCGAAGGCAA-GA 1677
**************** **** ** * * * * ** * * * ** * *** **
consensus_1527#0 GGCATCAGCACTACTCTCCACCGTGCTGATGCCTCCTAAGATCAGCAAGAACACGGAGAT 1872
consensus_1527#1 AAAATGAGT--CAGGCTCCACCGTGCTGGTACCTCACAGGATCGGGAAGAAGACGGAGAC 1735
** ** * ************* * **** * **** * ***** *******
consensus_1527#0 ATTGCGCCATATCCAGATCAAGGATGGCCCAGAAGCCCAGCTCCAGCTTTCGCATGTCGC 1932
consensus_1527#1 ATTGCGCCATGTCCGGATTAAGGACGGCCAAG---------CCGACCTTGCACGGATTGG 1786
********** *** *** ***** **** ** * * *** * * * *
consensus_1527#0 GTCTCTGGATGGGCTAAGGAAGCTGGGGGTGGTCCTCGACGGCAGGGAAGATAACATCAA 1992
consensus_1527#1 GTCTCTAGAGCAGCTGAGGAAGTTGGGAGTCGTCCTCGACGGCAGCCAAGGTAACATCAC 1846
****** ** *** ****** **** ** ************** *** ********
consensus_1527#0 GCTTTTGCTCACCACAATTGCCAGGCGGAGTGATACCCTGCGATCACTATCAGTCTGGAT 2052
consensus_1527#1 TCATTTGCTTGAAGCAATCTCCAAGCGGAGAGATACCCTGCGCTCACTGTCAGTCTGGAT 1906
* ****** **** *** ****** *********** ***** ***********
consensus_1527#0 CACCGAGCCGCCGCCGGAGC--ACAGTGTCACTGGTGAACGCC-ACGGCGTTTTCGTGAC 2109
consensus_1527#1 CACGGAGCCACCGCCACCGCCGGCTGCGGAGCACATGGCCGGCGACGACGTGTTCGTGAC 1966
*** ***** ***** ** * * * * ** ** * *** *** ********
consensus_1527#0 TCTCGACCACAAGGAGAAGGCGACCACATTGTTCTCGCATCCCAGTAAACTTGAGAGCTT 2169
consensus_1527#1 TCTTGACCATTCACAAGAAGAAATC--------CTAGC-TCCCAGTAAACTTGAGAGCTT 2017
*** ***** * * * * * ** ** *********************
consensus_1527#0 A------AACCTCAAGTGCTAC---AAGGGAAAAAACAACAACAACAA------CTACAA 2214
consensus_1527#1 AGACCTCAACCTCAAGTGCTTCTTCAAGGGAGGAAATGGCGGCGACAAGAGAGGCTACAA 2077
* ************* * ****** *** * * **** ******
consensus_1527#0 TATTCCTCCATGGATCAT---AAGCCTCCAAAAGCTCTCCAAGATCACTCTACGTCACAG 2271
consensus_1527#1 GCTCCCTACATGGATCAACGAAAAGTTCCAAGCGCTTTCCAAGATCACTCTACGTTACAC 2137
* *** ********* ** ***** *** ****************** ***
consensus_1527#0 CTTACTTTCCAGAGGTGGTCTGAGAGAGCTTGGCAAGATGAAGAGCTTGCGCTGCCTCAA 2331
consensus_1527#1 CCTACTGCGCGACGACGGTCTGCGGATCCTCGGCAAGCTGAAGAGCTTGCGCTGCCTCAG 2197
* **** * * ****** * ** ****** *********************
consensus_1527#0 GCTCCGTCAGGAATCATATATCGAAGCCGACGTCACCGTGAAGTACGGGGAGTTCGAGGA 2391
consensus_1527#1 GCTGCTTCGCAAATCATACATCGAAAGCGAGGTCACCCTCGAGGAGGGGGAGTTCGGGGA 2257
*** * ** ******* ****** *** ****** * ** * ********** ***
consensus_1527#0 CCTCAGGCTTCTTGTGATTGATAAGATCTCCAACAAGATGACCAAACTTGTCTTCGAAGA 2451
consensus_1527#1 GCTGAGGCTCCTCCTGCTTGATCATGTCTCTGATAAGACGGCC---TTGTTGATCAAAGC 2314
** ***** ** ** ***** * **** * **** * ** * * ** ***
consensus_1527#0 AGATGCAGCTCCCAAGCTGGAGAAGATTGTCTGGAACTTCGACACGATGACAACGCTGAT 2511
consensus_1527#1 CCGTGCAGCTCCCAAGCTGGAGAAGATTGTGTGGAACTTGAACAAGACGAAGACGTTGGT 2374
*************************** ******** *** ** ** *** ** *
consensus_1527#0 GGGGATCACGGTAAACAACATCAAAGGGATCGAAAATCTTCAAAACTTGAAGGAGCTATG 2571
consensus_1527#1 GACGATCTCCCCCGACGACATTGCTGGGATCAATAA---------CACGGCCATACTTCG 2425
* **** * ** **** ****** * ** * * ** *
consensus_1527#0 GATCAACGGCGTCAACATACCGTTTCCTTCAAGATCCCGTGAATGGAAGGATATAACCAC 2631
consensus_1527#1 CTTCAAGGCCGCCGATGCAGCAGCTCCTACGAAGGA--GAAGGTTGACTGGAACTGCAAC 2483
**** * ** * * * * **** * * * * ** * * * **
consensus_1527#0 AGTTCCGCAGAAATTATGGAGGCACACTTTTGGACCGGTAATTGAAAGCTTAGCATCTGA 2691
consensus_1527#1 AGCACGAGGAAGATCACTCCGG-ACATCATCCGGGGTTCAATCGAA--TTCAA----TCA 2536
** * * ** * ** *** * * *** *** * * * *
consensus_1527#0 AAGCTGAGACGTTTCTTCTACCTCCATCCTGTAAGGTGAGCTATATATGTTCTTTCTCTC 2751
consensus_1527#1 AGTCCAAGAGGGAGCTCAAGAATTCCTCAAGTAAGT----CCGAGGGAGCTCAAGATCTC 2592
* * *** * ** * * ** ***** * * ** ****
consensus_1527#0 ATCCGCGATTGAACTCATCGATGAGCCTCCTCCATGCCACATTTGCCTTCTCCGTCTGTC 2811
consensus_1527#1 AT--------GAA-------GTGCGTGTTCCCCTTACCACGCGATCGATCTATATACGT- 2636
** *** ** * * * ** * **** * *** * **
consensus_1527#0 TGCTAGTGCCACCATATCCATTGCCACCCCTTGATCTCTCACCTGCTGCCTCCTAACCAC 2871
consensus_1527#1 TGCT----TCATCACAGT-AGAAGGAGACCAGAATGTGGAAAGAATAATTAAATGAAGAC 2691
**** ** ** * * * ** ** * * * * **
consensus_1527#0 TATGTTTACCTTATTCCTGTTGCTGACCCTGCCCACCATGGATTCACCCACCCACCAGCA 2931
consensus_1527#1 C-TACTTACAT-ATTTCTAT--CTGGCCGGTTCTGGTAAGAATTAAT------AATCGCA 2741
* **** * *** ** * *** ** * * * *** * * ***
consensus_1527#0 GCTACATGAGCCGCTGGATATATAT-CACTCCAATGAAGTGTCTTATATATAAGAATTTC 2990
consensus_1527#1 AGTTCACTGCCGCGTGTATATATATTCATTATATT------------------------- 2776
* ** * ** ******** ** * * *
consensus_1527#0 TCATCAGTTCCCTGAGAAATAACAAAGCCGGAAGAAAAAAGACCGATCTATCGCTGATGC 3050
consensus_1527#1 ------------------------------------------------------------
consensus_1527#0 ACTACTTAATATCCTGCCTATGTTTTTTATGTGAATTCTGTAACGTGATGCCATGTCTGT 3110
consensus_1527#1 ------------------------------------------------------------
consensus_1527#0 GTGTGTTGCTGTTCAACATGACAATGTATATATATCATGCATGTACTTATCGCACCTACT 3170
consensus_1527#1 ------------------------------------------------------------
consensus_1527#0 GAAATATATACTGTAATGTATTGG 3194
consensus_1527#1 ------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||