cluster # 15273

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Oryza sativa
cluster # 15273 cluster # 15273 Sequences # 21 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15273#0 length = 1015 sequences # 15
consensus_15273#1 length = 647 sequences # 4

consensus_15273#2 length = 533 sequences # 1
consensus_15273#3 length = 222 sequences # 1

consensusID : consensus_15273#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1015
fasta sequence

                              [GCACGCACCCGAGCCCCACTGCAATCCCACCTCCCCAACTCCGCCGCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT-AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGAGCGACGGGCCG-TTCTGCGTCTCCTCCTTCGTGGTCAGC-TTCTACGTGCCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGAGGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCATGATTTAACGGGGAACATCAATATATATACCTTTTCAGCTCTGTTTCGAAGAAAAA]

[+] EMBL AK071702             [GCACGCACCCGAGCCCCACTGCAATCCCACCTCCCCAACTCCGCCGCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGAGCGACGGGCCG TTCTGCGTCTCCTCCTTCGTGGTCAGC TTCTACGTGCCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGAGGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTC                                                                                ]
[+] EMBL AK068329             [    GCACCCGAGCCCCACTGCAATCCCACCTCCCCAACTCCGCCGCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGAGCGACGGGCCG TTCTGCGTCTCCTCCTTCGTGGTCAGC TTCTACGTGCCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGAGGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCATGATTTAACGGGGAACATCAATATATATACC                         ]
[+] EMBL AK104322             [     CACCCGAGCCCCACTGCAATCCCACCTCCCCAACTCCGCCGCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGAGCGACGGGCCG TTCTGCGTCTCCTCCTTCGTGGTCAGC TTCTACGTGCCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGAGGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTT                                                                                 ]
[+] EMBL AU088638             [                 ACTGCAATCCCACCTCCCCAACTCCGCCGCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTG CGACGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACNGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACGCAGGTng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSR10192B            [                   TGCAATCCCACCTCCCCAACTCCGCCGCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGCNGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGNCGTCACNCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSR10471A            [                   TGCAATCCCACCTCCCCAACTCCGNCGCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGACGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGTCACCCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB645764             [                      AATCC  CCTTAAAAACTCCGCCGCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACAATCGAGATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGAGCGACGGGCCG TTCTGCGTCTCCTCCTTCGTGGTCAGC TTCTACGTGCCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGAGGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATC                                                                                                                                                                                    ]
[+] EMBL AU088585             [                         CCCACCTCCCCAACTCCGCCGCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCG CACCCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGAGCGACGGGCCG TTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AA751968             [                                CCCCAACTCCNCCGCACGCA CCCCGCNCCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGANGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCCGTTGTTCAACTACATCCAGGGGAAGAACNCNTTCNACGAGACGATCGANATGACGGCGCCGGTGCTGACGCANGTGGCGCCGAACGACGGGCCG TTCTGCGTCTCCTCCTTCGTGGTCAGC TTCTACGTGCCGGCGAA AAACAGCCGGA CCGCCGCCGGCGGAAGGGCTGCACGTNCAAAAGTGGGCCGGGGGCAAGTAC CCGCTGTGCGCCGCTTCNGGGGnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB683793             [                                             GCACGCATCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCT AATGCTCCCACTCCTCGCCGCCGCCGCTGTCACCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGAGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGAGCGACGGGCCG TTCTGCGTCTCCTCCTTCGTGGTCAGC TTCTACCTGCCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGAGGTGGGCCGGGGCCAAGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAAGTGGGCCGCCGCCGTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AA752938             [                                                        cgtgCCGGCCA CATGGCTCGCCGGAGCGGCCTNAATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCCGTTGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCNNCGGTGCTGACGCAGGTGGCGCCGAGCGACGGGCCG TTCTGCGTCTCCTCCTTCGTGGTCAGC TTCTACGTGCCGGCGAANAACCAGCCGGACCTGCCGCCGGCGGAGGGGCTGCACGTGCANAAGTGGGCCGGGGCCAGGTACNCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGANCA GCCGCGCTGCTCGACGCCANCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU088586             [                                                                                                                                                                                                                                                                                                                                                                                          CGGGCCGTTTTTGCGTCTCCTCCTTCGTGGTCAGCTTTTTACGTGCCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGAAGGGGCTGCACGTGCAAAGGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCNCTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACANCAATAAAAGTTCTGTTTAGTCAACTATTTNAAaaaa                                                        ]
[+] EMBL AU184090             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGCCGTGTCCGACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCATGATTTAACGGGGAACATCAATATATATACCTTTTCAGCTCTGTTTCGAAGAAAAA]
[+] EMBL AU184094             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGCCGTGTCCGACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCATGATTTAACGGGGAACATCAATATATATACCTTTTCAGCTCTGTTTCGAAGAAAAA]
[+] EMBL BE228264             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           caggattcCGCACT  AGCTCGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGC                                                                                                                                                                             ]




>consensus_15273#0
GCACGCACCCGAGCCCCACTGCAATCCCACCTCCCCAACTCCGCCGCACGCATCCCCGCA
CCCGCCACCATGGCTCGCCGGAGCGGCCTAATGCTACTACTCCTCGCCGCCGCCGCTGTC
GCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTG
GACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCC
CCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGTTGTTCAAC
TACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACG
CAGGTGGCGCCGAGCGACGGGCCGTTCTGCGTCTCCTCCTTCGTGGTCAGCTTCTACGTG
CCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGAGGTGGGCC
GGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGC
GAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCC
GACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTC
GAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGAC
ATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGAC
TCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAA
GCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGA
CTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCAT
GATTTAACGGGGAACATCAATATATATACCTTTTCAGCTCTGTTTCGAAGAAAAA

consensusID : consensus_15273#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 647
fasta sequence

                              [TCGTGGTCAGCTTCTACTGCCGGCGAANAACCAGCCGGATCCGCCGCCGGCGGAAGGGGCTGCACTTCAGAGGTGGGCCGGGGCCAGGTACGCCGCTGTTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGANCAGGNCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCNACGTCGTCGTACACGGTGGCCCAGTACAACTCGCCGTTCGAGTTCAGCGGTCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCATGATTTAACGGGGAACATCAATATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU029648             [TCGTGGTCAGCTTCTACTGCCGGCGAANAACCAGCCGGATCCGCCGCCGGCGGAAGGGGCTGCACTTCAGAGGTGGGCCGGGGCCAGGTACGCCGCTGTTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGANCAGGNCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCNACGTCGTCGTACACGGTGGCCCAGTACAACTCGCCGTTCGAGTTCAGCGGTCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCATGATTTAACGGGGAACATCAATATATAAAAAAAAAAAAAA                                                ]
[+] EMBL AF522018             [                                                                                                                                                                                                                                                                                                                                                           CCAAATCTTCAAATGTTCACCGGAGTAGTAGACTCGATCACGCAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAA                                                                                                                                                                                                       ]
[+] EMBL CF297928             [                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAATNTTTGTTTAGTCAACTATTTTAACGCATGATTTAACGGGGAACATCAATATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI796240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCATGATTTAACGGGGAACATCAATATATATACCTTTTCAGCTCAAAAAAAAAAA                                    ]




>consensus_15273#1
TCGTGGTCAGCTTCTACTGCCGGCGAANAACCAGCCGGATCCGCCGCCGGCGGAAGGGGC
TGCACTTCAGAGGTGGGCCGGGGCCAGGTACGCCGCTGTTGCGCCGCTTCGGCGGCTTCG
TGGCCGACTCCGACGTCGGCGANCAGGNCGCGCTGCTCGACGCCAGCCTGCAGGGGACCA
GGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCNACGTCGTCGTACACGGTGGC
CCAGTACAACTCGCCGTTCGAGTTCAGCGGTCAGGGTCAACGAGATATGGATGCTCTTCG
ACGCGAAGGATGCATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAA
TGTTCACCGGAGTAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGG
AAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAA
AGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTT
AGTCAACTATTTTAACGCATGATTTAACGGGGAACATCAATATATAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15273#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 533
fasta sequence

                              [GCGGATATCAGCGAATGTGTTTANTNTCCNGGGGAANAACGCGTACAACGAGACGATCGANATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGANCGACGGGCCGTTCTGCGTCTCCTCCTTCGTGGTCAGCTTCTACGTGCCGGCGAANAACAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCANANGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGANCANGCCGCGCTGCTCGACGCCAGCCTGCAGGGGANCANGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCCNACGTCCTCNTACACGGTGGCGCANTACAACTCNCCNTTCGANTTCANCGGCAGGGTCNACNAAATATGGATGCTCTTCCACNCNAAAGATGCATCCNACATGTTACGCNATTAACGCGCGGCAATTCCCAATCTTCNAATGTTCNCCGGANTNATANACTCCATCGCNCANCTTGTGTTATCTTCNANCTC]

[+] EMBL AA751914             [GCGGATATCAGCGAATGTGTTTANTNTCCNGGGGAANAACGCGTACAACGAGACGATCGANATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGANCGACGGGCCGTTCTGCGTCTCCTCCTTCGTGGTCAGCTTCTACGTGCCGGCGAANAACAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCANANGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGANCANGCCGCGCTGCTCGACGCCAGCCTGCAGGGGANCANGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCCNACGTCCTCNTACACGGTGGCGCANTACAACTCNCCNTTCGANTTCANCGGCAGGGTCNACNAAATATGGATGCTCTTCCACNCNAAAGATGCATCCNACATGTTACGCNATTAACGCGCGGCAATTCCCAATCTTCNAATGTTCNCCGGANTNATANACTCCATCGCNCANCTTGTGTTATCTTCNANCTC]




>consensus_15273#2
GCGGATATCAGCGAATGTGTTTANTNTCCNGGGGAANAACGCGTACAACGAGACGATCGA
NATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGANCGACGGGCCGTTCTGCGTCTCCTC
CTTCGTGGTCAGCTTCTACGTGCCGGCGAANAACAGCCGGACCCGCCGCCGGCGGAGGGG
CTGCACGTGCANANGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTC
GTGGCCGACTCCGACGTCGGCGANCANGCCGCGCTGCTCGACGCCAGCCTGCAGGGGANC
ANGTGGGCCGCCGCCGTGTCCGACGGGCGCAGGGCCGACCCNACGTCCTCNTACACGGTG
GCGCANTACAACTCNCCNTTCGANTTCANCGGCAGGGTCNACNAAATATGGATGCTCTTC
CACNCNAAAGATGCATCCNACATGTTACGCNATTAACGCGCGGCAATTCCCAATCTTCNA
ATGTTCNCCGGANTNATANACTCCATCGCNCANCTTGTGTTATCTTCNANCTC

consensusID : consensus_15273#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 222
fasta sequence

                              [TCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF316920             [TCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_15273#3
TCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAAGCCC
TAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAGTTGTGACTCG
TGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTCAACTATTTTAACGCAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15273#1      ------------------------------------------------------------
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      GCACGCACCCGAGCCCCACTGCAATCCCACCTCCCCAACTCCGCCGCACGCATCCCCGCA 60
consensus_15273#2      ------------------------------------------------------------
                                                                                   

consensus_15273#1      ------------------------------------------------------------
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      CCCGCCACCATGGCTCGCCGGAGCGGCCTAATGCTACTACTCCTCGCCGCCGCCGCTGTC 120
consensus_15273#2      ------------------------------------------------------------
                                                                                   

consensus_15273#1      ------------------------------------------------------------
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      GCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTG 180
consensus_15273#2      ------------------------------------------------------------
                                                                                   

consensus_15273#1      ------------------------------------------------------------
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      GACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCC 240
consensus_15273#2      ------------------------------------------------------------
                                                                                   

consensus_15273#1      ------------------------------------------------------------
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      CCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGTTGTTCAAC 300
consensus_15273#2      ------------------------------------------------------------
                                                                                   

consensus_15273#1      ------------------------------------------------------------
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      TACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACG 360
consensus_15273#2      ------------------------------------------------------------
                                                                                   

consensus_15273#1      ----------------------------------------TCGTGGTCAGCTTCTACTGC 20
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      CAGGTGGCGCCGAGCGACGGGCCGTTCTGCGTCTCCTCCTTCGTGGTCAGCTTCTACGTG 420
consensus_15273#2      ------------------------------------------------------------
                                                                                   

consensus_15273#1      CGGCGAANAACCAGCCGGATCCGCCGCCGGCGGAAGGGGCTGCACTTCAGAGGTGGGCCG 80
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      CCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGAGGTGGGCC 480
consensus_15273#2      ------------------------------------------------------------
                                                                                   

consensus_15273#1      GGGCCAGGTACGCCGCTGTTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGC 140
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      GGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGC 540
consensus_15273#2      ------------------------------------------------------------
                                                                                   

consensus_15273#1      GANCAGGNCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCC 200
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      GAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCC 600
consensus_15273#2      --------------------GCGGATATCAGCGAATGTGTTTANTNTCCNGGGGAANAAC 40
                                                                                   

consensus_15273#1      GACGGGCGCAGGGCCGACCNACGTCGTCGTACACGGTGGCCCAGTACAACTCGCCGTTCG 260
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      GACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTC 660
consensus_15273#2      GCGTACAACGAGACGATCGANATGACGGCGCCGGTGCTGACGCAGGTGGCGCCGANCGAC 100
                                                                                   

consensus_15273#1      AGTTCAGCGGTCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGAC 320
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      GAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGAC 720
consensus_15273#2      GGGCCGTTCTGCGTCTCCTCCTTCGTGGTCAGCTTCTACGTGCCGGCGAANAACAGCCGG 160
                                                                                   

consensus_15273#1      ATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGAC 380
consensus_15273#3      ------------------------------------------------------------
consensus_15273#0      ATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAGTAGTAGAC 780
consensus_15273#2      ACCCGCCGCCGGCGGAGGGGCTGCACGTGCANANGTGGGCCGGGGCCAGGTACGCCGCTG 220
                                                                                   

consensus_15273#1      TCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAA 440
consensus_15273#3      ----TCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAA 56
consensus_15273#0      TCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGCATCTTAAA 840
consensus_15273#2      TGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGANCANGCCGCGCTGCTCG 280
                            ***   *   *  *  *   * *   *   *****          **        

consensus_15273#1      GCCCTAAACTGC------TCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAG 494
consensus_15273#3      GCCCTAAACTGC------TCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAG 110
consensus_15273#0      GCCCTAAACTGC------TCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTGAG 894
consensus_15273#2      ACGCCAGCCTGCAGGGGANCANGTGGGCCGCCGCCGTGT-CCGACGGGCGCAGGGCCGAC 339
                        * * *  ****       *  ***  * *      **  * *    *      *  ** 

consensus_15273#1      TTGTGACTCGTGCGTATCGAGATTAACAACAA-TAAAAGTTCTGTTTAGTCAACTATTTT 553
consensus_15273#3      TTGTGACTCGTGCGTATCGAGATTAACAACAA-TAAAAGTTCTGTTTAGTCAACTATTTT 169
consensus_15273#0      TTGTGACTCGTGCGTATCGAGATTAACAACAA-TAAAAGTTCTGTTTAGTCAACTATTTT 953
consensus_15273#2      CCNACGTCCTCNTACACGGTGGCGCANTACAACTCNCCNTTCGANTTCANCGGCAGGGTC 399
                               *      *  * *    *  **** *     ***   **   *  *    * 

consensus_15273#1      AACGCATGATTTAACGGGGAACATCAATATATAAAAAAAAAAAAAAAAAAAAAAAAAAAA 613
consensus_15273#3      AACGCA--------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAA 203
consensus_15273#0      AACGCATGATTTAAC-----------------GGGGAACATCAATATATATACCTTTTCA 996
consensus_15273#2      NACNAAATATGGATGCTC----------TTCCACNCNAAAGATGCATCCNACATGTTACG 449
                        **  *                               * *     *              

consensus_15273#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------------- 647
consensus_15273#3      AAAAAAAAAAAAAAAAAAA----------------------------------------- 222
consensus_15273#0      GCTCTGTTTCGAAGAAAAA----------------------------------------- 1015
consensus_15273#2      CNATTAACGCGCGGCAATTCCCAATCTTCNAATGTTCNCCGGANTNATANACTCCATCGC 509
                                      **                                           

consensus_15273#1      ------------------------
consensus_15273#3      ------------------------
consensus_15273#0      ------------------------
consensus_15273#2      NCANCTTGTGTTATCTTCNANCTC 533