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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15277#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1581 fasta sequence
[AGGAGGACGCCACGAGATCTGCAGCGAGAGAGAGCCAGCGAAGCGCGACTCCGTTTTAACCGCCTTCGCCGCCGCCGCCGCGA-TATCGATCCCCTCCCTCTCGCCGTCGACGCCGTCGGCAT-CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGC-TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC-TTTTAACAACAGTCACGGTTGATGAG-TTTGGAACTCCAGGG-TTGAAATCAATTCTTAGTTTGGTAG-TTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAA-GTGTTGGCCTGAATTCCAATCCTATGGT-TAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTG-TTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGAACAATCATGGTGATA-CCTTGATTGCATCCTACTACC-ACCTGGTAAAGCACCA-TTCGAACACTGCCGTAGGAGCTGAGCTGT-CCCACAGCTT-CTCAA-GGAATGAGAG-CACAC-TGATC-TTTGGGTCCCAGCA-CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATC-GCTAATC-ACCATCTCTGGTGAGGTTGAC-ACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA-TTGAGTATGTTTTGCATCCTAGGAATTTTTCT-TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT-TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATATCTCTGTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTCGAAATTTTTTGGGGGGGGCCCGGACCCCATTTCCCCTTATAGGGAGCCGTTTTACCCCCCCTCATTGCCCGTTTTTTTACAACTTTGGAACGGGAAAACCCTTGCCGTTCCCCACTTTAATCCCTTTGAAGAAAATCCCCTTTTCGCCAGTGGGGTAAAAACAAAAAAGGCCCCAACCAATCCCCTTTCCAAAAATTTGCCCACCCTAATTGGCAAAGGGAACCCCCCTTGTACCGCCCCTTTAACCCGGGGGGGGGGGGGGTTTACCCCCAAGGGAACCTTTACATTGGCAAGG]
[+] EMBL AK070745 [AGGAGGACGCCACGAGATCTGCAGCGAGAGAGAGCCAGCGAAGCGCGACTCCGTTTTAACCGCCTTCGCCGCCGCCGCCGCGA TATCGATCCCCTCCCTCTCGCCGTCGACGCCGTCGGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGC TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTGGAACTCCAGGG TTGAAATCAATTCTTAGTTTGGTAG TTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAA GTGTTGGCCTGAATTCCAATCCTATGGT TAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTG TTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGAACAATCATGGTGATA CCTTGATTGCATCCTACTACC ACCTGGTAAAGCACCA TTCGAACACTGCCGTAGGAGCTGAGCTGT CCCACAGCTT CTCAA GGAATGAGAG CACAC TGATC TTTGGGTCCCAGCA CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATC GCTAATC ACCATCTCTGGTGAGGTTGAC ACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA TTGAGTATGTTTTGCATCCTAGGAATTTTTCT TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATATCTCTGTGTTCCAc ]
[+] EMBL AU095207 [ CGAGATCTGCAGCGAGAGAGAGCCAGCGAAGCAGAACTCCGTTTTAACCGCCTTCGCCGCCGCCGCCGCGA TATCGATCCCCTCCCTCTCGCCGTCGACGCCGTCGGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGC TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTGGAACTCCAGGG TTGAAATCAATTCTTAGTTTGGTAG TTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCT ]
[+] EMBL AU165905 [ TGCAGCGAGAGAGAGCCAGCGAAGCG GACTCCGTTTTAACCGCCTTCGCCGCCGCCGCCGCGA TATCGATCCCCTCCCTCTCGCCGTCGACGCCGTCGGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGCTTGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATCTTTTTAACAACAGTCACGGTTGATGAGTTTTGGNACTCCAGGG TTGAAATCNATTCT ]
[+] EMBL CF324529 [ CGAGAGAGAGCCAGCGAAGCGCGACTCCGTTTTAACCGCCTTCGCCGCCGCCGCCGCGA TATCGATCCCCTCCCTCTCGCCGTCGACGCCGTCGGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGC TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTGGAACTCCAGGG TTGAAATCAATTCTTAGTTTGGTAG TTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATAT ]
[+] EMBL CA763927 [ gggggGAAGCGCGACTCCGTTTTAACCGCCTTCGCCGCCGCCGCCGCGA TATCGATCCCCTCCCTCTCGCCGTCGACGCCGTCGGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGC TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTGGAACTCCAGGG TTGAAATCAATTCTTAGTTTGGTAG TTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAA GTGTTGGCCTGAATTCCAATCCTATGGT TAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTG TTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAANTCAGACCTTATTGCTTCTCTGCATCTGAACAATCATGGNGATACCCTTGATTGCATCCTACTACCNCCCTGGNAAAGCACCATTTCGAACACTGCCGTAGGAGCTGAGCTGTCCCCNCAGCTTCCTCAANGGAATGAGAGCCCCACTTGATCTTTTGGGTCCCGGGACCTTATTG ]
[+] EMBL AK104055 [ GCGACTCCGTTTTAACCGCCTTCGCCGCCGCCGCCGCGA TATCGATCCCCTCCCTCTTGCCGTCGACGCCGTCGGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACTTGCACCCCCGAGGGCGTCACTATCACAGC TGCAGGAACAAGGAACAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTGGAACTCCAGGG TTGAAATCAATTCTTAGTTTGGTAG TTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAA GTGTTGGCCTGAATTCCAATCCTATGGT TAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTG TTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGAACAATCATGGTGATA CCTTGATTGCATCCTACTACC ACCTGGTAAAGCACCA TTCGAACACTGCCGTAGGAGCTGAGCTGT CCCACAGCTT CTCAA GGAATGAGAG CACAC TGATC TTTGGGTCCCAGCA CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATC GCTAATC ACCATCTCTGGTGAGGTTGAC ACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA TTGAGTATGTTTTGCATCCTAGGAATTTTTCT TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATATC ]
[+] EMBL AK104419 [ TTAACCGCCTTCGCCGCCGCCGCCGCGA TATCGATCCCCTCCCTCTCGCCGTCGACGCCGTCGGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGC TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTGGAACTCCAGGG TTGAAATCAATTCTTAGTTTGGTAG TTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAA GTGTTGGCCTGAATTCCAATCCTATGGT TAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTG TTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGAACAATCATGGTGATA CCTTGATTGCATCCTACTACC ACCTGGTAAAGCACCA TTCGAACACTGCCGTAGGAGCTGAGCTGT CCCACAGCTT CTCAA GGAATGAGAG CACAC TGATC TTTGGGTCCCAGCA CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATC GCTAATC ACCATCTCTGGTGAGGTTGAC ACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA TTGAGTATGTTTTGCATCCTAGGAATTTTTCT TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATATCTC ]
[+] EMBL OSC468 [ CCGCCTTCGCCGCCGCCGCCGCGANTATCGATCCCCTCCCTCTCGCCGTCGACGCCGT GG ATGCCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGC TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTGGGACTTCAGGGTTTGAAATCAATTCTTAGTTTTGTAGTTTCCAGACCAGA GT AGGGGAGNTTGAACTTCAGTACCTTCAT ]
[+] EMBL AU070065 [ CCGCCTTCGCCGCCGCCGCCGCGA TATCGATCCCCTCCCTCTCGCCGTCGACGCCGT GGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGC TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTTGGACTTCAGGGTTTGAAATCAATTCTTAGTTTNGTAG TTCCAGACCAGAGGTAAGGG AGNTTTGACTTCAGTACCTTCATG ATATGCTGGCATC ATTCAA GTGTTNGCCTGAATTCC AT CTATG ]
[+] EMBL OSA251563 [ CGCCTTCGCCGCCGCCGCCGCGA TATCGATCCCCTCCCTCTCGCCGTCGACGCCGTCGGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTATCACAGC TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTGGAACTCCAGGG TTGAAATCAATTCTTAGTTTGGTAG TTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAA GTGTTGGCCTGAATTCCAATCCTATGGT TAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTG TTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGAACAATCATGGTGATA CCTTGATTGCATCCTACTACC ACCTGGTAAAGCACCA TTCGAACACTGCCGTAGGAGCTGAGCTGT CCCACAGCTT CTCAA GGAATGAGAG CACAC TGATC TTTGGGTCCCAGCA CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATC GCTAATC ACCATCTCTGGTGAGGTTGAC ACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA TTGAGTATGTTTTGCATCCTAGGAATTTTTCT TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATAaaaaaa ]
[+] EMBL CF312684 [ CCTCCCTCTCGCCGTCGACGCCGTCGGCAT CCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAGGGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCTAGGGCGTCACTATCACAGC TGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATC TTTTAACAACAGTCACGGTTGATGAG TTTGGAACTCCAGGG TTGAAATCAATTCTTAGTTTGGTAG TTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAANGTGTTGGCCTGAATTCCAATCCTATGGTNTAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTGTTTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGAAC ATCATGGTGATC CCTTGATTGCATCCTACTACC ACCTGGTAAA ]
[+] EMBL C99220 [ TGAACAATCATGGTGATA CCTTGATTGCATCCTACTACC ACCTGGTAAAGCACCA TTCGAACACTGCCGTAGGAGCTGAGCTGT CCCACAGCTT CTCAA GGAATGAGAG CACAC TGATC TTTGGGTCCCAGCA CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATC GCTAATC ACCATCTCTGGTGAGGTTGAC ACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA TTGAGTATGTTTTGCATCCTAGGAATTTTTCT TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATAaaaaaa ]
[+] EMBL BI797004 [ CTGT CCCTCAGCTT CTCAA GGAATGAGAG CACTC TGATC TTTGGGTCCCA CA CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGGGCGCTCGTCCAGCATGAATGGCGTCCCCAATC GCTAATC ACCATCTCTGGTGAGGTTGAC ACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA TTGAGTATGTTTTGCATCCTAGGAATTTTTCT TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACC TTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGCCAAACATTAGCCTTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTC AATATGATGGAGATATCTCTGTGTTCCCAAAAAAAAAA ]
[+] EMBL AU095206 [ T CTCAA GGAATGAGAG CACAC TGATC TTTGGGTCCCAGCA CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATC GCTAATC ACCATCTCTGGTGAGGTTGAC ACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA TTGAGTATGTTTTGCATCCTAGGAATTTTTCT TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATATCTCTGTGTTCCAAAAAAA ]
[+] EMBL AU030943 [ GGAATGAGAG CACAC TGATC TTTGGGTCCCAGCA CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATC GCTAATC ACCATCTCTGGTGAGGTTGAC NCCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA TTGAGTATGTTTTGCATCCTAGGAATTTTTCT TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATATCTCTGTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ]
[+] EMBL AU182905 [ TTGGGTCCCAGCA CTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATC GCTAATC ACCATCTCTGGTGAGGTTGAC ACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCA TTGAGTATGTTTTGCATCCTAGGAATTTTTCT TCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATAaaaaaa ]
[+] EMBL BQ908653 [ gcgtccgATGGCGTCCCAAATCGGCTAATCAACCATCTCTGGTGAGGTTGACAACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCATTTGAGTATGTTTTGCATCCTAGGAATTTTTCTGTCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTA GCAAACATTAGCATTGGCTATATATTTTNTATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATAaaaa ]
[+] EMBL CA758239 [ TGGCTTCATTTTGATCTTGAGTTCTTTCCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTT TATCCTCGGCGCCTGTTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGATATCTCTGTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTCGAAATTTTTTGGGGGGGGCCCGGACCCCATTTCCCCTTATAGGGAGCCGTTTTACCCCCCCTCATTGCCCGTTTTTTTACAACTTTGGAACGGGAAAACCCTTGCCGTTCCCCACTTTAATCCCTTTGAAGAAAATCCCCTTTTCGCCAGTGGGGTAAAAACAAAAAAGGCCCCAACCAATCCCCTTTCCAAAAATTTGCCCACCCTAATTGGCAAAGGGAACCCCCCTTGTACCGCCCCTTTAACCCGGGGGGGGGGGGGGTTTACCCCCAAGGGAACCTTTACATTGGCAAGG]
consensusID : consensus_15277#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1075 fasta sequence
[GCAATTCAGTACAATTGCGGTTCAGCATGTCTGCGCATTTGATTTGTGCTTTCTATGTTAATGATTTTTGTTTGTACTGCAGACTATCACAGCTGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATCTTTTAACAACAGTCACGGTTGATGAGTTTGGAACTCTAGGGTTGAAATCAATTCTTAGTTTGGTAGTTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAANGTGTTGGCCTGAATTCCAATCCTATGGTTAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTGTTTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGTAAGTATTGATTCTATGCATGGTTATCATATATTAGCACTGCATGTTACTTCCAAGTCTGACTGAGAAGCCAATTCCAGAATAACATTTCTTGTTTACTGGTTGTTGTGGTCATTACTCCTGTATCAGTTTATTTAGTTTGGTAACTTACCTTACAATTCCTGTCCAGGAACAATCATGGTGATACCTTGATTGCATCCTACTACCACCTGGTAAAGCACCATTCGAACACTGCCGTAGGAGCTGAGCTGTCCCACAGCTTCTCAAGGAATGAGAGCACACTGATCTTTGGGTCCCAGCACTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATCGCTAATCACCATCTCTGGTGAGGTTGACACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCATTGAGTATGTTTTGCATCCTAGGAATTTTTCTTCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCAAAAAAA]
[+] EMBL CF315048 [GCAATTCAGTACAATTGCGGTTCAGCATGTCTGCGCATTTGATTTGTGCTTTCTATGTTAATGATTTTTGTTTGTACTGCAGACTATCACAGCTGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAAGAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATCTTTTAACAACAGTCACGGTTGATGAGTTTGGAACTCTAGGGTTGAAATCAATTCTTAGTTTGGTAGTTCCAGACCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAANGTGTTGGCCTGAATTCCAATCCTATGGTTAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTGTTTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGTAAGTATTGATTCTATGCATGGTTATCATATATTAGCACTGCATGTTACTTCCAAGTCTGACTGAGAA ]
[-] EMBL CF315049 [ TATTGATTCTATGCATGGTTATCATATATTAGCACTGCATGTTACTTCCAAGTCTGACTGAGAAGCCAATTCCAGAATAACATTTCTTGTTTACTGGTTGTTGTGGTCATTACTCCTGTATCAGTTTATTTAGTTTGGTAACTTACCTTACAATTCCTGTCCAGGAACAATCATGGTGATACCTTGATTGCATCCTACTACCACCTGGTAAAGCACCATTCGAACACTGCCGTAGGAGCTGAGCTGTCCCACAGCTTCTCAAGGAATGAGAGCACACTGATCTTTGGGTCCCAGCACTCATTGGACCCTCACACGACAGTGAAGGCTCGCTTCAACAACTATGGCATGGCCAGCGCGCTCGTCCAGCATGAATGGCGTCCCAAATCGCTAATCACCATCTCTGGTGAGGTTGACACCAAGGCAATTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGCTCAAGCATTGAGTATGTTTTGCATCCTAGGAATTTTTCTTCAGTTCTTGTGGATTGGAATAACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCAAAAAAA]
consensusID : consensus_15277#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 735 fasta sequence
[AGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAAGTGTTGGCCTGAATTCCAATCCTATGGTTAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTGTTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGAACAATCATGGTGATACCTTGATTGCATCCTACTACCACCTGGTAAAGCACCATTCGGACACTGCCGTAGGAGCTTGAGCTGTNCCACAGCTTCTTCAAGGAATGAGGGGCACACTTGATCTTTTGGGGTCCCAGCACTTATTTNGACCCCTCACACGGCAAGTAAAGGNTTGGTTTTAACAACCTTATNGGAATTNGCCNGCGGGGTTTGTCCAGCAATTGAANTGNGGGTCCNAAATNTGNTAATTANCAATTTTTTTGGTGNGGGTTTNAACCAAAGGAAATTTNTGATGGGGACNGAAAGNTTGGGTTTTCCNTTNGNGTTNNGATTNAGNATTGTTTTTAANCCTTGGGTTTTTTTAAGACTTTTNTGNTTTGGNNNNATTTNAAAAANTTNGNCNTNGTNCNTTTNGGNTATTNTNNCTTGNNNNTTNCNNCNNNTTNTTTGGAATNNCNGTTNGATTNTNTTTTTTGNGGNNGTNNNTNTTNGGGGTTNCGNTTTTGNNTNTTTTT]
[+] EMBL D43349 [AGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAAGTGTTGGCCTGAATTCCAATCCTATGGTTAACCTTTCTGGTGTCTTTGGAAGCAAAGAGCTCTCAGTTGGTGTTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAATGCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGAACAATCATGGTGATACCTTGATTGCATCCTACTACCACCTGGTAAAGCACCATTCGGACACTGCCGTAGGAGCTTGAGCTGTNCCACAGCTTCTTCAAGGAATGAGGGGCACACTTGATCTTTTGGGGTCCCAGCACTTATTTNGACCCCTCACACGGCAAGTAAAGGNTTGGTTTTAACAACCTTATNGGAATTNGCCNGCGGGGTTTGTCCAGCAATTGAANTGNGGGTCCNAAATNTGNTAATTANCAATTTTTTTGGTGNGGGTTTNAACCAAAGGAAATTTNTGATGGGGACNGAAAGNTTGGGTTTTCCNTTNGNGTTNNGATTNAGNATTGTTTTTAANCCTTGGGTTTTTTTAAGACTTTTNTGNTTTGGNNNNATTTNAAAAANTTNGNCNTNGTNCNTTTNGGNTATTNTNNCTTGNNNNTTNCNNCNNNTTNTTTGGAATNNCNGTTNGATTNTNTTTTTTGNGGNNGTNNNTNTTNGGGGTTNCGNTTTTGNNTNTTTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15277#0 AGGAGGACGCCACGAGATCTGCAGCGAGAGAGAGCCAGCGAAGCGCGACTCCGTTTTAAC 60
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 CGCCTTCGCCGCCGCCGCCGCGATATCGATCCCCTCCCTCTCGCCGTCGACGCCGTCGGC 120
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 ATCCATGGCGCCAGGGCTCTACACCGACATCGGCAAGAAGACCAGAGATCTGCTTTACAG 180
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ---------------------------------GCAATTCAGTACAATTGCGGTTCAGCA 27
consensus_15277#0 GGACTACGGGACGCACCACAAGTTCACCCTCACCACCTGCACCCCCGAGGGCGTCACTAT 240
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 TGTCTGCGCATTTGATTTGTGCTTTCTATGTTAATGATTTTTGTTTGTACTGCAGACTAT 87
consensus_15277#0 CACAGCTGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAA 300
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 CACAGCTGCAGGAACAAGGAAAAATGAGTCTGTCTTTGGTGAGCTCCAAACCCAGCTTAA 147
consensus_15277#0 GAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATCTTTTAACAACAGT 360
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 GAACAAGAAATTGACTGTTGATGTCAAAGCAAACTCAGAGTCCGATCTTTTAACAACAGT 207
consensus_15277#0 CACGGTTGATGAGTTTGGAACTCCAGGGTTGAAATCAATTCTTAGTTTGGTAGTTCCAGA 420
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 CACGGTTGATGAGTTTGGAACTCTAGGGTTGAAATCAATTCTTAGTTTGGTAGTTCCAGA 267
consensus_15277#0 CCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAAG 480
consensus_15277#2 ----AGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAAG 56
consensus_15277#1 CCAGAGGTCAGGGAAGCTTGAACTCCAGTACCTTCATGAATATGCTGGCATCAATGCAAN 327
*******************************************************
consensus_15277#0 -TGTTGGCCTGAATTCCAATCCTATGGTTAACCTTTCTGGTGTCTTTGGAAGCAAAGAGC 539
consensus_15277#2 -TGTTGGCCTGAATTCCAATCCTATGGTTAACCTTTCTGGTGTCTTTGGAAGCAAAGAGC 115
consensus_15277#1 GTGTTGGCCTGAATTCCAATCCTATGGTTAACCTTTCTGGTGTCTTTGGAAGCAAAGAGC 387
***********************************************************
consensus_15277#0 TCTCAGTTGGTGTT-GATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAAT 598
consensus_15277#2 TCTCAGTTGGTGTT-GATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAAT 174
consensus_15277#1 TCTCAGTTGGTGTTTGATGTTGCATTCGACACTGCGACTAGCAATTTCACCAAGTACAAT 447
************** *********************************************
consensus_15277#0 GCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTG------------ 646
consensus_15277#2 GCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTG------------ 222
consensus_15277#1 GCTGCATTGAGTCTAACCAATTCAGACCTTATTGCTTCTCTGCATCTGTAAGTATTGATT 507
************************************************
consensus_15277#0 ------------------------------------------------------------
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 CTATGCATGGTTATCATATATTAGCACTGCATGTTACTTCCAAGTCTGACTGAGAAGCCA 567
consensus_15277#0 ------------------------------------------------------------
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ATTCCAGAATAACATTTCTTGTTTACTGGTTGTTGTGGTCATTACTCCTGTATCAGTTTA 627
consensus_15277#0 -------------------------------------AACAATCATGGTGATACCTTGAT 669
consensus_15277#2 -------------------------------------AACAATCATGGTGATACCTTGAT 245
consensus_15277#1 TTTAGTTTGGTAACTTACCTTACAATTCCTGTCCAGGAACAATCATGGTGATACCTTGAT 687
***********************
consensus_15277#0 TGCATCCTACTACCACCTGGTAAAGCACCATTCGAACACTGCCGTAGGAGCT-GAGCTGT 728
consensus_15277#2 TGCATCCTACTACCACCTGGTAAAGCACCATTCGGACACTGCCGTAGGAGCTTGAGCTGT 305
consensus_15277#1 TGCATCCTACTACCACCTGGTAAAGCACCATTCGAACACTGCCGTAGGAGCT-GAGCTGT 746
********************************** ***************** *******
consensus_15277#0 CCCACAGCTTCT-CAAGGAATGAGAG-CACACT-GATCTTT--GGGTCCCAGCACTCATT 783
consensus_15277#2 NCCACAGCTTCTTCAAGGAATGAGGGGCACACTTGATCTTTTGGGGTCCCAGCACTTATT 365
consensus_15277#1 CCCACAGCTTCT-CAAGGAATGAGAG-CACACT-GATCTTT--GGGTCCCAGCACTCATT 801
*********** *********** * ****** ******* ************* ***
consensus_15277#0 GGA--CCCTCACACGACA-GTGAAGGCTCG-CTTCAACAAC--TATGGCA--TGGCCAGC 835
consensus_15277#2 TNGACCCCTCACACGGCAAGTAAAGGNTTGGTTTTAACAACCTTATNGGAATTNGCCNGC 425
consensus_15277#1 GGA--CCCTCACACGACA-GTGAAGGCTCG-CTTCAACAAC--TATGGCA--TGGCCAGC 853
********** ** ** **** * * ** ****** *** * * * *** **
consensus_15277#0 GCG-CTCGTCCAGCA--TGAATGGCG--TCCCAAATC-GCTAATCACCA---TCTCTGGT 886
consensus_15277#2 GGGGTTTGTCCAGCAATTGAANTGNGGGTCCNAAATNTGNTAATTANCAATTTTTTTGGT 485
consensus_15277#1 GCG-CTCGTCCAGCA--TGAATGGCG--TCCCAAATC-GCTAATCACCA---TCTCTGGT 904
* * * ******** **** * * *** **** * **** * ** * * ****
consensus_15277#0 GAGG-TTGACACCAAGGCAA----TTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGC 941
consensus_15277#2 GNGGGTTTNAACCAAAGGAAATTTNTGATGGGGACNGAAAGNTTGGGTTTTCCNTTNGNG 545
consensus_15277#1 GAGG-TTGACACCAAGGCAA----TTGAGAAGAGCACGAAAGTTGGCTTGTCCTTGGTGC 959
* ** ** ***** * ** *** * * ** **** ** *** *
consensus_15277#0 TCAAGCATTGAGTATGTTTTGCATCCTAGGAATTTTTCTTCAGTTCTTGTGGATTGGAAT 1001
consensus_15277#2 TTNNG-ATTNAGNATTGTTTTTAANCCTTGGGTTTTTTTAAGACTTTTNTGNTTTGGNNN 604
consensus_15277#1 TCAAGCATTGAGTATGTTTTGCATCCTAGGAATTTTTCTTCAGTTCTTGTGGATTGGAAT 1019
* * *** ** ** *** * * * ***** * * ** ** ****
consensus_15277#0 AACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCTTGAGTTCTTT 1061
consensus_15277#2 NATTT--NAAAAANTTNGNCNTNGTN--CNTTTNGGNT--ATTNTNNCTT---GNNNNTT 655
consensus_15277#1 AACATGGAAAAAACATGGCCACAGCTACCATTGTGGCTTCATTTTGATCAAAAAAA---- 1075
* * ***** * * * * * ** ** * *** *
consensus_15277#0 CCCCACCATTACCCTAGGCAAACATTAGCATTGGCTATATATTTTTATCCTCGGCGCCTG 1121
consensus_15277#2 NCNNCNNNTTNTTTGGAATNNCNGTTNG-ATT--NTNTTTTTTGNGGNNGTNNNTNTTNG 712
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 TTGTTAATAATTTTGGGTGATTTGAGACCTATTGCTGAATACTGTCAAATATGATGGAGA 1181
consensus_15277#2 GGGTTN-CGNTTTTGNNTNTTTTT------------------------------------ 735
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 TATCTCTGTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1241
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTCGAAATTTTTTGGGGG 1301
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 GGGCCCGGACCCCATTTCCCCTTATAGGGAGCCGTTTTACCCCCCCTCATTGCCCGTTTT 1361
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 TTTACAACTTTGGAACGGGAAAACCCTTGCCGTTCCCCACTTTAATCCCTTTGAAGAAAA 1421
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 TCCCCTTTTCGCCAGTGGGGTAAAAACAAAAAAGGCCCCAACCAATCCCCTTTCCAAAAA 1481
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 TTTGCCCACCCTAATTGGCAAAGGGAACCCCCCTTGTACCGCCCCTTTAACCCGGGGGGG 1541
consensus_15277#2 ------------------------------------------------------------
consensus_15277#1 ------------------------------------------------------------
consensus_15277#0 GGGGGGGTTTACCCCCAAGGGAACCTTTACATTGGCAAGG 1581
consensus_15277#2 ----------------------------------------
consensus_15277#1 ----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||