cluster # 15279

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Oryza sativa
cluster # 15279 cluster # 15279 Sequences # 21 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15279#0 length = 1235 sequences # 15
consensus_15279#1 length = 595 sequences # 1
consensus_15279#2 length = 443 sequences # 1

consensus_15279#3 length = 442 sequences # 1
consensus_15279#4 length = 402 sequences # 2
consensus_15279#5 length = 146 sequences # 1

consensusID : consensus_15279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1235
fasta sequence

                              [TCCCCCCACCGATTTCGTCCCCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTTCTCCGGGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGGAGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAGCAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAGGCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCTGCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCTGGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCCCACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGACTACTCAGCTTCCCCACCGAGAAAGGATACGCACCCCACAAAATCTCCTAGGCGTCAGCCAAAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCCAGTAGAGATGGCGACCCTCGCGATGCTGATAACGGTTATGAGAAGAGGTC-GCCCCCACCTGACAGCGATGGATCCC-CTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGGTC-GCCTCCAGGATCCCGCTCTAGGTC-C-GCC-GATGT-TTC-CC-CTGCC-CGCAGCGA-CTGAC-AGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCT-CCATCTTCCT-TCCTGGTCC-AACCAAGCTGTTTCAATTAAACCGAAG-CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACA-ATGTGACA-TTGGTGTTGTGTACTACCACTAGTGAG-CCTTGAACTGGGTAACCGCCTATTTCCACATCTATCAAAGCTTGTGAG]

[+] EMBL CF277402             [TCCCCCCACCGATTTCGTCCCCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTTCTCCGGGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGGAGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAGCAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGGTGCCTCTGAGGCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF277876             [  CCCCCACCGATTTCGTCCCCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTTCTCCGGGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGGAGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAGCAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAGGCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCTGCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCTGGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCCCACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGACTACTCAGCTTCCCCACCGAGAAAGGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK065531             [    CCCACCGATTTCGTCCCCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTTCTCCGGGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGGAGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAGCAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAGGCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCTGCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCTGGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCCCACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGACTACTCAGCTTCCCCACCGAGAAAGGATACGCACCCCACAAAATCTCCTAGGCGTCAGCCAAAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCAAGTAGAGATGGCGACCCTCGCGATGCTGATAACGGTTATGAGAAGAGGTC GCCCCCACCTGACAGCGATGGATCCC CTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGGTC GCCTCCAGGATCCCGCTCTAGGTC C GCC GATGT TTC CC CTGCC CGCAGCGA CTGAC AGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCT CCATCTTCCT TCCTGGTCC AACCAAGCTGTTTCAATTAAACCGAAG CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACA ATGTGACA TTGGTGTTGTGTACTACCACTAGTGAG CCTTGAACTGGGTAACCGCCTATTTCCACATCTATCTATGCTTGTGAG]
[+] EMBL AU166707             [                                                                                                                                                     CCCTAGGAGGGGATATGGAGGACGGAGGGAGCAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAGGCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCTGCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCTGGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTTCCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BP185093             [                                                                                                                                                                    acGAGG  GGAGGGAGCAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAGGCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCTGCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCTGGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCCCACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGACTACTCAGCTTCCCCACCGAGAAAGGATACGCACCCCACAAAATCTCCTAGGCGTCAGCCAAAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCCAGTAGAGATGGCGACCCTCGCGATGCTGATAACGGTTATGAGAAGAGGTC GCCCCCACCTGACAGCGATGGATCCC CTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB665029             [                                                                                                                                                                       AGGACCGAGGGAGCAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAGGCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCTGCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTATAGCTAGAGTCAGGGGTTACTCTGGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCCCACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGACTACTCAGCTTCCCCACCGAGAAAGGATACGCACCCCACAAAATCTCCTAGGCGTCAGCCAAAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCCAGTAGAGATGGCGACCCTCGCGATGCTGATAACGGTTATGAGAAGAGGTC GCCCCCACCTGACAGCGATGGATCCC CTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGGTC GCCTCCAGGATCCCGCTCTAGGTC C GCC GATGT TTC CC CTGCC CGCAGCGA CTGAC AGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGT                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AB110200             [                                                                                                                                                                                     AGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAGGCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCTGCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCTGGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCCCACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGACTACTCAGCTTCCCCACCGAGAAAGGATACGCACCCCACAAAATCTCCTAGGCGTCAGCCAAAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCCAGTAGAGATGGCGACCCTCGCGATGCTGATAACGGTTATGAGAAGAGGTC GCCCCCACCTGACAGCGATGGATCCC CTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGGTC GCCTCCAGGATCCCGCTCTAGGTC C GCC GATGT TTC CC CTGCC CGCAGCGA CTGAC AGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCT CCATCTTCCT TCCTGGTCC AACCAAGCTGTTTCAATTAAACCGAAG CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACA ATGTGACA TTGGT                                                                       ]
[-] EMBL CB665030             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCTGGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCCCACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGACTACTCAGCTTCCCCACCGAGAAAGGATACGCACCCCACAAAATCTCCTAGGCGTCAGCCAAAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCCAGTAGAGATGGCGACCCTCGCGATGCTGATAACGGTTATGAGAAGAGGTC GCCCCCACCTGACAGCGATGGATCCC CTCCACACCGGAGGTCTCTTAGGCACTCCTCAGGGTC GCCTCCAGGATCCCGCTCTAGGTC C GCC GATGT TTC CC CTGCC CGCAGCGA CTGAC AGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCT CCATCTTCCT TCCTGGTCC AACCAAGCTGTTTCAATTAAACCGAAG CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAGATGTGACACTTGGTGTTGTGTACTACCACTAGTGAG CCTTGAACTGGGTAACCGCCTATTTCCAC                   ]
[-] EMBL CF277403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAAAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCCAGTAGAGATGGCGACCCTCGCGATGCTGATAACGGTTATGAGAAGAGGTC GCCCCCACCTGACAGCGATGGATCCC CTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGGTC GCCTCCAGGATCCCGCTCTAGGTC C GCC GATGT TTC CC CTGCC CGCAGCGA CTGAC AGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCT CCATCTTCCT TCCTGGTCC AACCAAGCTGTTTCAATTAAACCGAAG CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACA ATGTGACA TTGGTGTTGTGTACTACCACTAGTGAG CCTTGAACTGGGTAGCCGCCTATTTCCACATCTATCAAAaaaac    ]
[+] EMBL BI811507             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCTCCTGCAGGTAGAGATGGCGACCCTCGCGATGCTGATAACGGTTATGAGAAGA GTC GCCCCCACCTGACAGCGATGGATCCC CTCCACACCGGAGGTCTCCTAGGCACTCCTCA GGTC GCCTCCAGGATCCCGCTCTAGGTC C GCC GATGT TTC CC CTGCC CGCAGCGA CTGAC AGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCT CCATCTTCCT TCCTGGTCC AACCAAGCTGTTTCAATTAAACCGAAG CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGTCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAAC TTAACTTGAAAC  ATGTGACA TTGGTGTTGTGTACTACCACTAGTGAGCCCTTGAACTGGGTAAaaaaaaaa                         ]
[+] EMBL BI795514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        agaAAGA GTCTGCCCCCACCTGACA CGATGGATCCCACTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGGTCTGCCTCCAGGATCCCGCTCTAGGTC C GCCAGATGTGTTC CCACTGCCACGCAGCGATCTGACAAGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCTGCCATCTTCCTGTCCTGGTCCAAACCAAGCTGTTTCAATTAAACCGAAG CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGTCATGAGTTTGGTATGGCACCTCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACC ATGTGACA TTGGTGTTGTGTACTACCACTAGTGAG CCTTGAACTGGGTAAaaaaaaaa                         ]
[+] EMBL BI811375             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGATGGATCCC CTCCACACCGGAGTTCTCCTAGGCACTCCTCAGGTTC  CCTCCAGGATCCCGCTCTAGGTCACAGCCAGATGT TTCACC CTGCCACGCAGCGA CTGACAAGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAAATTTAGTCAGTCT CCATCTTCCT TCCTGGTCCAAACCAAGCTGTTTCAATTAAACCGAAG CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGTCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGA CTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACA ATGTGACA TTGGTGTTGTGTACTACCACTAGTGAGCCCTTGAACTGGGTAACCGCCTATTTCCACAaaaaaaaaa         ]
[+] EMBL BI805064             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTAGGTC C GCC GATGT TTC CC CTGCC CGCAGCGA CTGAC AGAACTTTGAACCCACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCCATTCTAGTCAGTCT CCATCTTCCT TCCTGGTCC AACCCAGCTGTTTCAATTAAACCGAAG CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCCTGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCCGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACC ATGTGACA TTGGTGTTGTGTACTACCCCTAGTGAGCCCTTGAAaaaaaaaa                                 ]
[+] EMBL CF331743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   T TCCTGGTCC AACCAAGCTGTTTCAATTAAACCGAAG CCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACA ATTTGACA TTGGTGTTGTGTACTACCACTAGTGAG CCTTGAACTGGGTAACCGCCTAaaaaaaaa                  ]
[-] EMBL CF331742             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCCTGGTCC AACCAAGCTGTTTCAATTAAACCGAAGCCCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACA ATTTGACA TTGGTGTTGTGTACTACCACTAGTGAG CCTTGAACTGGGTAACCGCCTAaaaaaaaaa                 ]




>consensus_15279#0
TCCCCCCACCGATTTCGTCCCCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTTCTCCG
GGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGG
AGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAG
CAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTT
CGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTAC
AGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAG
GCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCT
GCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCT
GGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCC
CACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGAC
TACTCAGCTTCCCCACCGAGAAAGGATACGCACCCCACAAAATCTCCTAGGCGTCAGCCA
AAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCCAGTAGAGATGGCGAC
CCTCGCGATGCTGATAACGGTTATGAGAAGAGGTCGCCCCCACCTGACAGCGATGGATCC
CCTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGGTCGCCTCCAGGATCCCGCTCTAGG
TCCGCCGATGTTTCCCCTGCCCGCAGCGACTGACAGAACTTTGAACCAACGAAATGGGAT
AGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCTCCATCTTCCTTCCTGGTCC
AACCAAGCTGTTTCAATTAAACCGAAGCCCTAAGCGGCGTGTTGTATTATTGCTAAGTGT
GCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCA
GGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACAT
TAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGAGCCTTGAACTGGGT
AACCGCCTATTTCCACATCTATCAAAGCTTGTGAG

consensusID : consensus_15279#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 595
fasta sequence

                              [CGGGATTNGNNGGGGNGAGGGGAANTCTTTTTTCCCCNNTAANGGGGGGGACCCTNGGGNGGGAAANGGTAGGNNGNANGGGTTTCCCCCNNCNAAAAGGGNGGATTCCCCCTCCAANCCGGGGGGTTTNCTGGGAATTTCTTAGGGTTTGCTTCAGNAAACCNGTTTAGGTTCNCCGGAATNTTNCCCCTGGCCCNNCAGGGGGAATGNAAAAGAAATTGGAACCAAAGGGAATGGGGATAGGTGGCATGAANTTTCAACAGCACCTTCCANTTNTAGTCAGTTTCCATTTTTCCTTTCCTGGGTCCAAACCAAGCTGTTTCAAATTAAACNGGAAGCCNTAAGCGGGCGTGTTGTATTATTGCTAAGTGTGCTTGTCATGAGTTTGGTATGGCAACATCGCCTGTTTGTGTGCTCATATGTTGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGAGCCTTGAACTGGGTAACCGCCTATTTCCACATCTATNTATGCTTGTGAGTGCTTAGCC]

[-] EMBL BE229148             [CGGGATTNGNNGGGGNGAGGGGAANTCTTTTTTCCCCNNTAANGGGGGGGACCCTNGGGNGGGAAANGGTAGGNNGNANGGGTTTCCCCCNNCNAAAAGGGNGGATTCCCCCTCCAANCCGGGGGGTTTNCTGGGAATTTCTTAGGGTTTGCTTCAGNAAACCNGTTTAGGTTCNCCGGAATNTTNCCCCTGGCCCNNCAGGGGGAATGNAAAAGAAATTGGAACCAAAGGGAATGGGGATAGGTGGCATGAANTTTCAACAGCACCTTCCANTTNTAGTCAGTTTCCATTTTTCCTTTCCTGGGTCCAAACCAAGCTGTTTCAAATTAAACNGGAAGCCNTAAGCGGGCGTGTTGTATTATTGCTAAGTGTGCTTGTCATGAGTTTGGTATGGCAACATCGCCTGTTTGTGTGCTCATATGTTGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGAGCCTTGAACTGGGTAACCGCCTATTTCCACATCTATNTATGCTTGTGAGTGCTTAGCC]




>consensus_15279#1
CGGGATTNGNNGGGGNGAGGGGAANTCTTTTTTCCCCNNTAANGGGGGGGACCCTNGGGN
GGGAAANGGTAGGNNGNANGGGTTTCCCCCNNCNAAAAGGGNGGATTCCCCCTCCAANCC
GGGGGGTTTNCTGGGAATTTCTTAGGGTTTGCTTCAGNAAACCNGTTTAGGTTCNCCGGA
ATNTTNCCCCTGGCCCNNCAGGGGGAATGNAAAAGAAATTGGAACCAAAGGGAATGGGGA
TAGGTGGCATGAANTTTCAACAGCACCTTCCANTTNTAGTCAGTTTCCATTTTTCCTTTC
CTGGGTCCAAACCAAGCTGTTTCAAATTAAACNGGAAGCCNTAAGCGGGCGTGTTGTATT
ATTGCTAAGTGTGCTTGTCATGAGTTTGGTATGGCAACATCGCCTGTTTGTGTGCTCATA
TGTTGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTT
TTGCTGAACATTAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGAGCC
TTGAACTGGGTAACCGCCTATTTCCACATCTATNTATGCTTGTGAGTGCTTAGCC

consensusID : consensus_15279#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence

                              [CCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTTCTCCGGGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGGAGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAGCAGGGTTCTGGAATTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGTAAGGCATTACTGAACAATTATATTAACATAATTTGGTTTGTTAGTTGTCAATTGCTGAACAACATTTATCTTCTTTACTCTAGCGTAGTAAATGTAGATTGTCTATATTTGTCTGTGCTGTTGGCCTGTCGTTGAAATGATTTTACAAGCTGTTCT]

[+] EMBL CB638990             [CCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTTCTCCGGGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGGAGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAGCAGGGTTCTGGAATTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGTAAGGCATTACTGAACAATTATATTAACATAATTTGGTTTGTTAGTTGTCAATTGCTGAACAACATTTATCTTCTTTACTCTAGCGTAGTAAATGTAGATTGTCTATATTTGTCTGTGCTGTTGGCCTGTCGTTGAAATGATTTTACAAGCTGTTCT]




>consensus_15279#2
CCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTTCTCCGGGAGCTCTACGCGACAAAAC
AATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGGAGGGGCTATGGTGGCAGAGG
AAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAGCAGGGTTCTGGAATTCTCTT
GGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTT
TGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTACAGCGGGTAAGGCATTACTGA
ACAATTATATTAACATAATTTGGTTTGTTAGTTGTCAATTGCTGAACAACATTTATCTTC
TTTACTCTAGCGTAGTAAATGTAGATTGTCTATATTTGTCTGTGCTGTTGGCCTGTCGTT
GAAATGATTTTACAAGCTGTTCT

consensusID : consensus_15279#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 442
fasta sequence

                              [GTCTCNTAGGCACTCCTCAGGGTCGCCTCCAGGATCCCGCTCTAGGTCCGCCNATGTTTCCCCTGCCCGCAGCGACTGACAGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCTCCATCTTCCTTCCTGGTCCAACCAAGCTGTTTCAATTAAACCGAAGCCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGNATGTTGTAGTCTTTTNANANCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGANCCTTGAACTGGGTAACCGCCTATTTCCCCAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU166706             [GTCTCNTAGGCACTCCTCAGGGTCGCCTCCAGGATCCCGCTCTAGGTCCGCCNATGTTTCCCCTGCCCGCAGCGACTGACAGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTCTAGTCAGTCTCCATCTTCCTTCCTGGTCCAACCAAGCTGTTTCAATTAAACCGAAGCCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGNATGTTGTAGTCTTTTNANANCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGANCCTTGAACTGGGTAACCGCCTATTTCCCCAAAAAAAAAAAAAAAAAAAA]




>consensus_15279#3
GTCTCNTAGGCACTCCTCAGGGTCGCCTCCAGGATCCCGCTCTAGGTCCGCCNATGTTTC
CCCTGCCCGCAGCGACTGACAGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTC
CACAGCACCTCCAATTCTAGTCAGTCTCCATCTTCCTTCCTGGTCCAACCAAGCTGTTTC
AATTAAACCGAAGCCCTAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTT
TGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGNATGTTGTAGTCT
TTTNANANCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAAT
GTGACATTGGTGTTGTGTACTACCACTAGTGANCCTTGAACTGGGTAACCGCCTATTTCC
CCAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15279#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 402
fasta sequence

                              [TCAGGGTCGCCTCCAGGATCCCGCTCTAGGTCCGCCGATGTTTCCCCTGCCCGCAGCGACTGACAGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTTTAGTCAGTCTCCATCTTCCTT--CCTGGTCCAAC-CAAGCTGTTTCAATTAAA-CCGAAGCCCTAAGCGGCGTGTTGTATTATTGCT-AAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGAGCCTTGAACTGGGTAAAAAAAAAAAA]

[-] EMBL CF277877             [TCAGGGTCGCCTCCAGGATCCCGCTCTAGGTCCGCCGATGTTTCCCCTGCCCGCAGCGACTGACAGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATTTTAGTCAGTCTCCATCTTCCTT  CCTGGTCCAAC CAAGCTGTTTCAATTAAA CCGAAGCCCTAAGCGGCGTGTTGTATTATTGCT AAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGAGCCTTGAACTGGGTAAAAAAAAAAAA]
[+] EMBL D42900               [                                                                                                                       cnaggcnAGTCGCCACCTTCCCTCCCCNGGCCCAACAAAANCTGTTCCAATTAAACCCGAAGCCCTAANCGGCGTGTTGTATTATTGCTAAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGCCTGTTTGTGTGCTCATATGTTGGGAGCCCAGGATGTTGTAGNCTTTTGAGAGCTGCTTTGTTTGGGGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTGACATTGGTGTTGTGTACTACCACTAGTGAGCCTTG                    ]




>consensus_15279#4
TCAGGGTCGCCTCCAGGATCCCGCTCTAGGTCCGCCGATGTTTCCCCTGCCCGCAGCGAC
TGACAGAACTTTGAACCAACGAAATGGGATAGCTGCATGATCTCCACAGCACCTCCAATT
TTAGTCAGTCTCCATCTTCCTTCCTGGTCCAACCAAGCTGTTTCAATTAAACCGAAGCCC
TAAGCGGCGTGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCACATCGC
CTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTG
TTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTGACATTGGTGTTGT
GTACTACCACTAGTGAGCCTTGAACTGGGTAAAAAAAAAAAA

consensusID : consensus_15279#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 146
fasta sequence

                              [CTCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTAACATTGGTGTTGTGTACTACCACACAAAGCAGCTCTC]

[-] EMBL BI306047             [CTCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTAACATTGGTGTTGTGTACTACCACACAAAGCAGCTCTC]




>consensus_15279#5
CTCTGTTTGTGTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTT
TGTTTGGTGGTCATTTGCTTTTTGCTGAACATTAACTTGAAACAATGTAACATTGGTGTT
GTGTACTACCACACAAAGCAGCTCTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      TCCCCCCACCGATTTCGTCCCCTCCGGCGGCGGCGGCGGCGGCGGCGCACGGCTTCTCCG 60
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      GGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCCCACCATATCGCAGTCCCCCTAGG 120
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      AGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCTAGGAGGGGATATGGAGGACGGAGGGAG 180
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      CAGGGTTCTGGAAGTCTCTTGGTCCGCAACATCCCATTAAGCTGCAGAGGGGAGGATCTT 240
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      CGAGTTCCTTTTGAAAGGTTTGGTCCTGTTCGGGATGTTTACCTGCCAAAGGATTATTAC 300
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      AGCGGGGAACCACGGGGATTTGCATTTGTGGAGTTCGTTGACCCTTATGATGCCTCTGAG 360
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      GCTCAATATCACATGAATCGCCAGGTGTTTTTCGGCCGGGAGATAACTGTTGTTCTTGCT 420
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      GCTGAGTCGCGGAAAAGGCCAGAGGAAATGCGCAGTAGAGCTAGAGTCAGGGGTTACTCT 480
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      GGAAACGAAGGGCGCCGCTCTTCATATTATGGGAGGTCTCGTTCCCGTTCTCGCTCTCCC 540
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      CACTATCGAGGTCGTCCACGGTCAAGGTCATACTCTCCTGCTCCAAGACGGCGAGATGAC 600
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ------------------------------------------------------------
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      TACTCAGCTTCCCCACCGAGAAAGGATACGCACCCCACAAAATCTCCTAGGCGTCAGCCA 660
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      ---------CGGGATTNGNNGGGGNGAGGGGAANTCTTTTTTCCCCNNTAANGGGGGGGA 51
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      AAAGAACATGATGAAGAGAAGAAGCGGAGATCCTACTCTCCTGCCAGTAGAGATGGCGAC 720
consensus_15279#2      ------------------------------------------------------------
                                                                                   

consensus_15279#1      CCCTNGGGNGGGAAANGGTAGGNNGNANGGGTTTCCCCCNNCNAAAAGGGNGGATTCCCC 111
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      ------------------------------------------------------------
consensus_15279#4      ------------------------------------------------------------
consensus_15279#0      CCTCGCGATGCTGATAACGGTTATGAGAAGAGGTCGCCCCCACCTGACAGCGATGGATCC 780
consensus_15279#2      -------------------------------------------CCTCCGGCGGCGGCGGC 17
                                                                                   

consensus_15279#1      CTCCAANCCGGGGGGTTTNCTGGGAATTTCTTAGGGTTTGCTTCAGNAAACCNGTTTAGG 171
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      --------------GTCTCNTAGGCACTCCTCAGGGTCGCCTCCAGGATCCCGCTCTAGG 46
consensus_15279#4      ------------------------------TCAGGGTCGCCTCCAGGATCCCGCTCTAGG 30
consensus_15279#0      CCTCCACACCGGAGGTCTCCTAGGCACTCCTCAGGGTCGCCTCCAGGATCCCGCTCTAGG 840
consensus_15279#2      GGCGGCGGCGCACGGCTTCTCCGGGAGCTCTACGCGACAAAACAATGAGGAGGTACAGCC 77
                                                                                   

consensus_15279#1      TTCNCCGGAATNTTNCCCCTGGCCCNNCAGGGGGAATGNAAAAGAAATTGGAACCAAAGG 231
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      TCCGCCN--ATGTTTCCCCTG--CCCGCAGCGAC----TGACAGAACTTTGAACCAACG- 97
consensus_15279#4      TCCGCCG--ATGTTTCCCCTG--CCCGCAGCGAC----TGACAGAACTTTGAACCAACG- 81
consensus_15279#0      TCCGCCG--ATGTTTCCCCTG--CCCGCAGCGAC----TGACAGAACTTTGAACCAACG- 891
consensus_15279#2      CACCATATCGCAGTCCCCCTA----GGAGGGGCTATGGTGGCAGAGGAAGAAGTCCCCCT 133
                                                                                   

consensus_15279#1      GAATGGGGATAGGTGGCATGAANTTTCAACAGCACCTTCCANTTNTAGTCAGTTTCCATT 291
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      -AAATGGGATAGCTG---CATGATCTCCACAGCACCT-CCAATTCTAGTCAGTCTCCATC 152
consensus_15279#4      -AAATGGGATAGCTG---CATGATCTCCACAGCACCT-CCAATTTTAGTCAGTCTCCATC 136
consensus_15279#0      -AAATGGGATAGCTG---CATGATCTCCACAGCACCT-CCAATTCTAGTCAGTCTCCATC 946
consensus_15279#2      AGGAGGGGATA--TGGAGGACGGAGGGAGCAGGGTTCTGGAATTCTC-TTGGTCCGCAAC 190
                                                                                   

consensus_15279#1      TTTCCTTTCCTGGGTCCAAACCAAGCTGTTTCAAATTAAACNGGAAGCCNTAAGCGGGCG 351
consensus_15279#5      ------------------------------------------------------------
consensus_15279#3      TTCC--TTCCTGG--TCCAACCAAGCTGTTTCAA-TTAAACCG-AAGCCCTAAGCGG-CG 205
consensus_15279#4      TTCC--TTCCTGG--TCCAACCAAGCTGTTTCAA-TTAAACCG-AAGCCCTAAGCGG-CG 189
consensus_15279#0      TTCC--TTCCTGG--TCCAACCAAGCTGTTTCAA-TTAAACCG-AAGCCCTAAGCGG-CG 999
consensus_15279#2      ATCCCATTAAGCTGCAGAGGGGAGGATCTTCGAGTTCCTTTTGAAAGGTTTG-------G 243
                                                                                   

consensus_15279#1      TGTTGTATTATTGCTAAGTGTGCTTGTCATGAGTTTGGTATGGCAACATCGCCTGTTTGT 411
consensus_15279#5      --------------------------------------------------CTCTGTTTGT 10
consensus_15279#3      TGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCA-CATCGCCTGTTTGT 264
consensus_15279#4      TGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCA-CATCGCCTGTTTGT 248
consensus_15279#0      TGTTGTATTATTGCTAAGTGTGCTTGCCATGAGTTTGGTATGGCA-CATCGCCTGTTTGT 1058
consensus_15279#2      TCCTGT----TCGGGATGTTTACCTGCCAAAGGATTATTACAGCG-GGTAAGGCATTACT 298
                                                                              **  *

consensus_15279#1      GTGCTCATATGTTG--AGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGG 469
consensus_15279#5      GTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGG 70
consensus_15279#3      GTGCTCATATGTTGGGAGTCCAGNATGTTGTAGTCTTTTNANANCTGCTTTGTTTGGTGG 324
consensus_15279#4      GTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGG 308
consensus_15279#0      GTGCTCATATGTTGGGAGTCCAGGATGTTGTAGTCTTTTGAGAGCTGCTTTGTTTGGTGG 1118
consensus_15279#2      GAACAATTATATT---AACATAATTTGGTTT-GTTAGTTGTCAATTGC--TGAACAACAT 352
                       *  *   *** **   *    *   ** * * **   **   *  ***  **        

consensus_15279#1      TCATTTGCTTTTTGCTGA-ACATTAACTTGAAACAATGTGACATTG---GTGTTGT-GTA 524
consensus_15279#5      TCATTTGCTTTTTGCTGA-ACATTAACTTGAAACAATGTAACATTG---GTGTTGT-GTA 125
consensus_15279#3      TCATTTGCTTTTTGCTGA-ACATTAACTTGAAACAATGTGACATTG---GTGTTGT-GTA 379
consensus_15279#4      TCATTTGCTTTTTGCTGA-ACATTAACTTGAAACAATGTGACATTG---GTGTTGT-GTA 363
consensus_15279#0      TCATTTGCTTTTTGCTGA-ACATTAACTTGAAACAATGTGACATTG---GTGTTGT-GTA 1173
consensus_15279#2      TTATCTTCTTTACTCTAGCGTAGTAAATGTAGATTGTCTATATTTGTCTGTGCTGTTGGC 412
                       * ** * ****   **     * *** *  * *   * *    ***   *** *** *  

consensus_15279#1      CTACCACT--AGTGAGCCTTGAACTGGGTAACCGCCTATTTCCACATCTATNTATGCTTG 582
consensus_15279#5      CTACCACACAAAGCAGCTCTC--------------------------------------- 146
consensus_15279#3      CTACCACT--AGTGANCCTTGAACTGGGTAACCGCCTATTTCCCCAAAAAAAAAAAAAAA 437
consensus_15279#4      CTACCACT--AGTGAGCCTTGAACTGGGTAA--------------AAAAAAAAAA----- 402
consensus_15279#0      CTACCACT--AGTGAGCCTTGAACTGGGTAACCGCCTATTTCCACATCTATCAAAGCTTG 1231
consensus_15279#2      CTGTCGTTGAAATGATTTTACAAGCTGTTCT----------------------------- 443
                       **  *     *   *                                             

consensus_15279#1      TGAGTGCTTAGCC 595
consensus_15279#5      -------------
consensus_15279#3      AAAAA-------- 442
consensus_15279#4      -------------
consensus_15279#0      TGAG--------- 1235
consensus_15279#2      -------------