cluster # 15298

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Oryza sativa
cluster # 15298 cluster # 15298 Sequences # 21 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15298#0 length = 1220 sequences # 10
consensus_15298#1 length = 711 sequences # 3
consensus_15298#2 length = 660 sequences # 3

consensus_15298#3 length = 636 sequences # 2
consensus_15298#4 length = 473 sequences # 2
consensus_15298#5 length = 227 sequences # 1

consensusID : consensus_15298#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1220
fasta sequence

                              [TCGCCGCTGCTTCCACTCCGCCTCCACCTCCGCCGCCGCCGCTGCTCCTCCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCTG--TCAGTGAAGACAACAATGTTGTCCATAA-GGCTGA-GGATGT-TGTCAGCA-CCATG-CTTGCT-AAGGGGTT--CACCCT-GGGGAA-AGA-TG-CCGTTGGCAA--GGCAAAAG--C-TTTTGA-TG-AG-AAGCA-T-GGGTT-C-ACA-TCCACT-GC-T-GGCG-CCAA-GGTGG-CCTCCATTGACAGGAAGATTGGTCTTAGCGAG-AAGTTCACTA-TTGGTACTTCCATAGTGAA-CGAGAAGGT-CAAGGAGATGGATCAGAAGTTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---AAATGCCGTTATTTAGCGTAT]

[+] EMBL AK061483             [TCGCCGCTGCTTCCACTCCGCCTCCACCTCCGCCGCCGCCGCTGCTCCTCCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCTG  TCAGTGAAGACAACAATGTTGTCCATAA GGCTGA GGATGT TGTCAGCA CCATG CTTGCT AAGGGGTT  CACCCT GGGGAA AGA TG CCGTTGGCAA  GGCAAAAG  C TTTTGA TG AG AAGCA T GGGTT C ACA TCCACT GC T GGCG CCAA GGTGG CCTCCATTGACAGGAAGATTGGTCTTAGCGAG AAGTTCACTA TTGGTACTTCCATAGTGAA CGAGAAGGT CAAGGAGATGGATCAGAAGTTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCAT                                                                                               ]
[+] EMBL AK104301             [    CGCTGCTTCCACTCCGCCTCCACCTCCGCCGCCGCCGCTGCTCCTCCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCTG  TCAGTGAAGACAACAATGTTGTCCATAA GGCTGA GGATGT TGTCAGCA CCATG CTTGCT AAGGGGTT  CACCCT GGGGAA AGA TG CCGTTGGCAA  GGCAAAAG  C TTTTGA TG AG AAGCA T GGGTT C ACA TCCACT GC T GGCG CCAA GGTGG CCTCCATTGACAGGAAGATTGGTCTTAGCGAG AAGTTCACTA TTGGTACTTCCATAGTGAA CGAGAAGGT CAAGGAGATGGATCAGAAGTTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTTGTAACTTGCAT                                                                                               ]
[+] EMBL AK074027             [     GCTGCTTCCACTCCGCCTCCACCTCCGCCGCCGCCGCTGCTCCTCCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCTG  TCAGTGAAGACAACAATGTTGTCCATAA GGCTGA GGATGT TGTCAGCA CCATG CTTGCT AAGGGGTT  CACCCT GGGGAA AGA TG CCGTTGGCAA  GGCAAAAG  C TTTTGA TG AG AAGCA T GGGTT C ACA TCCACT GC T GGCG CCAA GGTGG CCTCCATTGACAGGAAGATTGGTCTTAGCGAG AAGTTCACTA TTGGTACTTCCATAGTGAA CGAGAAGGT CAAGGAGATGGATCAGAAGTTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTT                                                                                                                                                                                                                   ]
[+] EMBL CF323467             [                                            CTCCTCCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA753385             [                                                 CCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCTGGNTCAGTGAAGACAACAATGTTGTCCATAAGGGCTGAGGGATGTNNGTCAGCACCCATGCCTTGCTAAAGGGGTTNNCACCCTGGGGGAANAGATTGCCCGTTGGCAAAGGGCAAAAGCCC TTTTGA TGAAGAAAGCATT GGGTTNC ACATTNCACTGGC TGGGCGCCCAAGGGTGGCCCTCCATTng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK099246             [                                                 CCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCTG  TCAGTGAAGACAACAATGTTGTCCATAA GGCTGA GGATGT TGTCAGCA CCATG CTTGCT AAGGGGTT  CACCCT GGGGAA AGA TG CCGTTGGCAA  GGCAAAAG  C TTTTGA TG AG AAGCA T GGGTT C ACA TCCACT GC T GGCG CCAA GGTGG CCTCCATTGACAGGAAGATTGGTCTTAGCGAG AAGTTCACTA TTGGTACTTCCATAGTGAA CGAGAAGGT CAAGGAGATGGATCAGAAGTTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCAtgttg                                                ]
[+] EMBL C28550               [                                                                                                                                              GGTCACCAATGTCTNCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCNCAAGGAGCAGAAACTGCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGC ACCAGTGTCCCTG  TCAGTGAAGACAACAATGTTGTCCATAA GGCTGA GGATGT TGTCAGCA CCATG CTTTCT AAGGGGTT  CACCCTGGGGGAA AGA TG CCGTTGGGAA  GGCAAAAG  CTTTTTNATTG AG AAGCA TNGGGTT CAAAA TCCACT TCTT GGGG CCAA GGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OS0474A              [                                                                                                                                                                                                                                            GATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCTG  TCAGTGAAGACAACAATGTTGTCCATAA GGCTGA GGATGT TGTCAGCA CCATG CTTGCT AAGGGGTT  CACCCT GGGGAA AGA TG CCGTTGGCAA  GGCAAAAG  C TTTTGA TG AG AAGCA T GGGTT C ACA TCCACT GC T GGCG CCAA GGTGG CCTCCATTGACAGGAAGATTGGTCTTAGCGAG ANGTTCACTA TTGGTACTT CATAGTGAA CGAGAAGGT  AAGGAGATGGATCAGAAGTT CAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU082305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGCGAGAAAGTTCACTATTTGGTACTTCCATAGTGAACCGAGAAGGTNCAAGGAGATGGATCAGAAGTTCCAGGTNTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCNCCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGNCAAAGGAGAAGATGGCAGCTGAAGNCCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACNCCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATNTAGAACAGAAAAAGTCCCCTCNTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTNAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA   AAA                  ]
[+] EMBL CF329101             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      tGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTATTTAGCGTAT]




>consensus_15298#0
TCGCCGCTGCTTCCACTCCGCCTCCACCTCCGCCGCCGCCGCTGCTCCTCCTCCTCGCGC
TTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACG
TCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACA
TTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATG
AGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTC
TTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATC
AACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCTGTCAGTG
AAGACAACAATGTTGTCCATAAGGCTGAGGATGTTGTCAGCACCATGCTTGCTAAGGGGT
TCACCCTGGGGAAAGATGCCGTTGGCAAGGCAAAAGCTTTTGATGAGAAGCATGGGTTCA
CATCCACTGCTGGCGCCAAGGTGGCCTCCATTGACAGGAAGATTGGTCTTAGCGAGAAGT
TCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAAGTTCCAGG
TGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGAT
CTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCA
ACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTG
AAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGAT
GACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATAT
AGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATT
GCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTG
GTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAA
AAGTTGTGGAAAGCTCCTTTAATAATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AATGCCGTTATTTAGCGTAT

consensusID : consensus_15298#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 711
fasta sequence

                              [TGGGNAAAGATCCCNTGGCAAGGCAAAACCTTTTGATGAGAAGCATGGNTTCACATCCACTTCTGCCNCCAAGGTGCCCTCCCATTGACCAGGAAGATTGGTCTTAGCGAGAAGTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAANTT-CCAGGTGTCGGACAAGNCCAAGTCTGCATTCGCTGCTGCTGAACCAGAAGGTGANCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAA-CCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCATGTTGATGTTGGTTCAAAAAAAAAA]

[+] EMBL C98053               [TGGGNAAAGATCCCNTGGCAAGGCAAAACCTTTTGATGAGAAGCATGGNTTCACATCCACTTCTGCCNCCAAGGTGCCCTCCCATTGACCAGGAAGATTGGTCTTAGCGAGAAGTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAANTT CCAGGTGTCGGACAAGNCCAAGTCTGCATTCGCTGCTGCTGAACCAGAAGGTGANCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCCCCAACGCATTCAACAAAGTTGCCAAGGCTNCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCANCTGAAGACCAGCATAAGGGCTCGGGTCCTTNTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTNCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAA CCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCATGTTGATGTTGGTTCAAAAAAAA  ]
[+] EMBL AU067941             [                                                                                                                                                                     AAGTTCCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAA CAGAAGGTGAGCACTGCTGGATCTGCTATCATGNAGAATNGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCNGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAA CCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCATGTTGATGTTGGTTCAAAAAAA   ]
[+] EMBL BQ908552             [                                                                                                                                                                                                                                      GCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACC ACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCATGTTGATGTTGGTTCAAAAAAAAAA]




>consensus_15298#1
TGGGNAAAGATCCCNTGGCAAGGCAAAACCTTTTGATGAGAAGCATGGNTTCACATCCAC
TTCTGCCNCCAAGGTGCCCTCCCATTGACCAGGAAGATTGGTCTTAGCGAGAAGTTCACT
ATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAANTTCCAGGTGTCG
GACAAGNCCAAGTCTGCATTCGCTGCTGCTGAACCAGAAGGTGANCACTGCTGGATCTGC
TATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAA
AGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGA
CCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACT
CCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAA
CAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAG
GAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTT
ATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGT
TGTGGAAAGCTCCTTTAATAATGTCATGTTGATGTTGGTTCAAAAAAAAAA

consensusID : consensus_15298#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 660
fasta sequence

                              [AAGGTGGCCCCCATTGACAGGAAGATTGGTCTTAGCGAGAAGTTCACTATTGGTACTTCCATAGTGANCGAGAAGGTCAAGGAGATGGATCAGAAAGTTCCAGGTNTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATNTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGNGGGCACTCGTACACNCCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATNTAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCNCAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU082302             [AAGGTGGCCCCCATTGACAGGAAGATTGGTCTTAGCGAGAAGTTCACTATTGGTACTTCCATAGTGANCGAGAAGGTCAAGGAGATGGATCAGAAAGTTCCAGGTNTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATNTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGNGGGCACTCGTACACNCCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATNTAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCNCAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF329100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGATCCCAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCAAAAAAAAAAAAAAAA                               ]
[+] EMBL CF338267             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGTATTCCGCTGCTTTATAAAGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGTTGTGGA                                                                  ]




>consensus_15298#2
AAGGTGGCCCCCATTGACAGGAAGATTGGTCTTAGCGAGAAGTTCACTATTGGTACTTCC
ATAGTGANCGAGAAGGTCAAGGAGATGGATCAGAAAGTTCCAGGTNTCGGACAAGACCAA
GTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAA
TAGGTATNTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGC
TGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGG
CTCGGGTCCTTCTGGNGGGCACTCGTACACNCCCATCCAGTGATGACTCCACGCTCTCTC
ATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATNTAGAACAGAAAAAGTCC
CCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTC
CAGTAGAATAGGAAATATGATGGTGATCNCAATGTATTCCGCTGGTTTATAAGGCGTATG
TTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACCTTGGCAAAAGTTGTGGAAAGCTC
CTTTAATAATGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15298#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 636
fasta sequence

                              [GCCGTTGGCAAGGCAAAAGCTTTTGATGAGAAGCATGGGTTCACATCCACTGCTGGCGCCAAGGTGGCCTCCATTGACAGGAAGATTGGTCTTAGCGAGAAGTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAAGTTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAAAAAAAAACCTCGTGC]

[-] EMBL CF326759             [GCCGTTGGCAAGGCAAAAGCTTTTGATGAGAAGCATGGGTTCACATCCACTGCTGGCGCCAAGGTGGCCTCCATTGACAGGAAGATTGGTCTTAGCGAGAAGTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAAGTTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAAAAAAAAACCTCGTGC]
[+] EMBL AU082301             [        CAAGGCAAAAGCTTTTGATGAGAAGCATGGGTTCACATCCACTGCTGGCGCCAAGGTGGCCTCCATTGACAGGAAGATTGGTCTTAGCGAGAAGTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAAGTTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCC                                                                                                                                                                                                                                               ]




>consensus_15298#3
GCCGTTGGCAAGGCAAAAGCTTTTGATGAGAAGCATGGGTTCACATCCACTGCTGGCGCC
AAGGTGGCCTCCATTGACAGGAAGATTGGTCTTAGCGAGAAGTTCACTATTGGTACTTCC
ATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAAGTTCCAGGTGTCGGACAAGACCAAG
TCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACTGCTGGATCTGCTATCATGAAGAAT
AGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGCATTCAACAAAGTTGCCAAGGCT
GCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGCAGCTGAAGACCAGCATAAGGGC
TCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCAGTGATGACTCCACGCTCTCTCA
TGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATAGATATAGAACAGAAAAAGTCCC
CTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCC
AGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGT
TCAAACTGTTTCTGGTTGTAAAAAAAAACCTCGTGC

consensusID : consensus_15298#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 473
fasta sequence

                              [CCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTCTTCTTTCAGCTCGTGGTCAATCACTATGGAACTTCTAGTGCATGCATTGCCAAAAAAAAGGAAGCAGAAGCAAAAACAATATCTTTAGTTGCATTTCCATTTCCTATAGTAGGATTTGATGTCCCTGTAACAATTGTTTGTTCTGCTAGAGCAAAAGCTGAGATGTCGTTCTATTTCATTGAAACAGGGCGCAACGATAGTTGATCTTTCTGTCATCATCGC]

[+] EMBL CF310775             [CCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTCTTCTTTCAGCTCGTGGTCAATCACTATGGAACTTCTAGTGCATGCATTGCCAAAAAAAAGGAAGCAGAAGCAAAAACAATATCTTTAGTTGCATTTCCATTTCCTATAGTAGGATTTGATGTCCCTGTAACAATTGTTTGTTCTGCTAGAGCAAAAGCTGAGATGTCGTTCTATTTCATTGAAACAGGGCGCAACGATAGTTGATCTTTCTGTCATCATCGC]
[+] EMBL AU067940             [CCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCAC                                                                                                                                                                                                                                 ]




>consensus_15298#4
CCTCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCT
CGCCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAAC
TGTGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCA
AAGTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGA
AACTGCACTTCTTCTTTCAGCTCGTGGTCAATCACTATGGAACTTCTAGTGCATGCATTG
CCAAAAAAAAGGAAGCAGAAGCAAAAACAATATCTTTAGTTGCATTTCCATTTCCTATAG
TAGGATTTGATGTCCCTGTAACAATTGTTTGTTCTGCTAGAGCAAAAGCTGAGATGTCGT
TCTATTTCATTGAAACAGGGCGCAACGATAGTTGATCTTTCTGTCATCATCGC

consensusID : consensus_15298#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 227
fasta sequence

                              [ATTGTGTTGTATTGATGGATGTAAACCATAGATATAGACCAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGACCCTTGGCAAAAAAAAAAAAAA]

[-] EMBL CF310776             [ATTGTGTTGTATTGATGGATGTAAACCATAGATATAGACCAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGACCCTTGGCAAAAAAAAAAAAAA]




>consensus_15298#5
ATTGTGTTGTATTGATGGATGTAAACCATAGATATAGACCAGAAAAAGTCCCCTCCTGGC
ATACCACATACTTCTATCAGTGAACTTTTCGCATTGCAGGAATTTTGTTTCCAGTAGAAT
AGGAAATATGATGGTGATCACAATGTATTCCGCTGGTTTATAAGGCGTATGTTCAAACTG
TTTCTGGTTGTAGTAACTTGCATGACCCTTGGCAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15298#2      ------------------------------------------------------------
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      ------------------------------------------------------------
consensus_15298#3      ------------------------------------------------------------
consensus_15298#0      TCGCCGCTGCTTCCACTCCGCCTCCACCTCCGCCGCCGCCGCTGCTCCTCCTCCTCGCGC 60
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      ------------------------------------------------------------
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      ------------------------------------------------------------
consensus_15298#3      ------------------------------------------------------------
consensus_15298#0      TTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACG 120
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      ------------------------------------------------------------
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      ------------------------------------------------------------
consensus_15298#3      ------------------------------------------------------------
consensus_15298#0      TCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTGCAAGACA 180
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      ------------------------------------------------------------
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      ------------------------------------------------------------
consensus_15298#3      ------------------------------------------------------------
consensus_15298#0      TTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATG 240
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      ------------------------------------------------------------
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      ------------------------------------------------------------
consensus_15298#3      ------------------------------------------------------------
consensus_15298#0      AGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACTGCACTTC 300
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      ------------------------------------------------------------
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      ------------------------------------------------------------
consensus_15298#3      ------------------------------------------------------------
consensus_15298#0      TTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCAGAATATC 360
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      ------------------------------------------------------------
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      ------------------------------------------------------------
consensus_15298#3      ------------------------------------------------------------
consensus_15298#0      AACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCTGTCAGTG 420
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      ------------------------------------------------------------
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      ------------------------------------------------------------
consensus_15298#3      ------------------------------------------------------------
consensus_15298#0      AAGACAACAATGTTGTCCATAAGGCTGAGGATGTTGTCAGCACCATGCTTGCTAAGGGGT 480
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      ------------------------------------------------------------
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      -------TGGGNAAAGATCCCNTGGCAAGGCAAAACCTTTTGATGAGAAGCATGGNTTCA 53
consensus_15298#3      -----------------GCCGTTGGCAAGGCAAAAGCTTTTGATGAGAAGCATGGGTTCA 43
consensus_15298#0      TCACCCTGGGGAAAGATGCCGTTGGCAAGGCAAAAGCTTTTGATGAGAAGCATGGGTTCA 540
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      -----------------AAGGTGGCCCCC-ATTGAC-AGGAAGATTGGTCTTAGCGAGAA 41
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      CATCCACTTCTGCCNCCAAGGTGCCCTCCCATTGACCAGGAAGATTGGTCTTAGCGAGAA 113
consensus_15298#3      CATCCACTGCTGGCGCCAAGGTGGCCTCC-ATTGAC-AGGAAGATTGGTCTTAGCGAGAA 101
consensus_15298#0      CATCCACTGCTGGCGCCAAGGTGGCCTCC-ATTGAC-AGGAAGATTGGTCTTAGCGAGAA 598
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      GTTCACTATTGGTACTTCCATAGTGANCGAGAAGGTCAAGGAGATGGATCAGAAAGTTCC 101
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      GTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAA-NTTCC 172
consensus_15298#3      GTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAA-GTTCC 160
consensus_15298#0      GTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAA-GTTCC 657
consensus_15298#4      ---------------------------------------CCTCCTCGCGCTTACAGTTTC 21
                                                                                   

consensus_15298#2      AGGTNTCGGACAAGACCAAGTCTGCATTCGC-TGCTGCTGAAC-AGAAGGTGAGCACTGC 159
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      AGGTGTCGGACAAGNCCAAGTCTGCATTCGC-TGCTGCTGAACCAGAAGGTGANCACTGC 231
consensus_15298#3      AGGTGTCGGACAAGACCAAGTCTGCATTCGC-TGCTGCTGAAC-AGAAGGTGAGCACTGC 218
consensus_15298#0      AGGTGTCGGACAAGACCAAGTCTGCATTCGC-TGCTGCTGAAC-AGAAGGTGAGCACTGC 715
consensus_15298#4      CTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCGCCATGGACGTCAAGCCGGT 81
                                                                                   

consensus_15298#2      TGGATCTGCTATCATGAAGAATAGGTATNTCTTCACCGGGGCTTCGTGGGTCACCAACGC 219
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      TGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGC 291
consensus_15298#3      TGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGC 278
consensus_15298#0      TGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAACGC 775
consensus_15298#4      GAGGACTGTGAAGGTCACCAATGTCT---CCCTGAGTGCAACTGTGCAAGACATTAAGGA 138
                                                                                   

consensus_15298#2      ATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGC 279
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      ATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGC 351
consensus_15298#3      ATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGC 338
consensus_15298#0      ATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATGGC 835
consensus_15298#4      GTTCTTTTCATTTTC---AGGAGACATTGAACATGTGGAGATGCAAAGTGGCGATGAGTG 195
                                                                                   

consensus_15298#2      AGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGNGGGCACTCGTACACNCCCATCCA 339
consensus_15298#5      ------------------------------------------------------------
consensus_15298#1      AGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCA 411
consensus_15298#3      AGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCA 398
consensus_15298#0      AGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATCCA 895
consensus_15298#4      GTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAG---CAGAAACTGCACTTCT 252
                                                                                   

consensus_15298#2      GTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATA 399
consensus_15298#5      ------------------------------ATTGTGTTGTATTGATGGATGTAAACCATA 30
consensus_15298#1      GTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATA 471
consensus_15298#3      GTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATA 458
consensus_15298#0      GTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAACATA 955
consensus_15298#4      TCTTTCAGCTCGTGGTCAATCACTATGGAACTTCTAGTGCATGCATTGCCAAAAAAAAGG 312
                                                      ** *  ** **  ** *    ***  *  

consensus_15298#2      GATNTAGAACAGAAAAAGTCCCCTCC-TGGCATACCACATACTTCTATCAGTGAACTTTT 458
consensus_15298#5      GATATAGACCAGAAAAAGTCCCCTCC-TGGCATACCACATACTTCTATCAGTGAACTTTT 89
consensus_15298#1      GATATAGAACAGAAAAAGTCCCCTCC-TGGCATACCACATACTTCTATCAGTGAACTTTT 530
consensus_15298#3      GATATAGAACAGAAAAAGTCCCCTCC-TGGCATACCACATACTTCTATCAGTGAACTTTT 517
consensus_15298#0      GATATAGAACAGAAAAAGTCCCCTCC-TGGCATACCACATACTTCTATCAGTGAACTTTT 1014
consensus_15298#4      AAGCAGAAGCAAAAACAATATCTTTAGTTGCATTTCCATTTCCTATAGTAG-GATTTGAT 371
                        *     * ** *** * *  * *   * ****  *   * * * **  ** **  *  *

consensus_15298#2      CGCATTGCAGGAATTTTGT-TTCCAGTAGAATAGGAAATATGATGGTGATCNCAATGTAT 517
consensus_15298#5      CGCATTGCAGGAATTTTGT-TTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTAT 148
consensus_15298#1      CGCATTGCAGGAATTTTGT-TTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTAT 589
consensus_15298#3      CGCATTGCAGGAATTTTGT-TTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTAT 576
consensus_15298#0      CGCATTGCAGGAATTTTGT-TTCCAGTAGAATAGGAAATATGATGGTGATCACAATGTAT 1073
consensus_15298#4      GTCCCTGTAACAATTGTTTGTTCTGCTAGAGCAAAAGCTGAGATGTCGTTC-TATTTCAT 430
                         *  ** *  **** * * ***   ****  *  *  *  ****  * **  * *  **

consensus_15298#2      TCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACC 577
consensus_15298#5      TCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGACCC 208
consensus_15298#1      TCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACC 649
consensus_15298#3      TCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAAAAAAAAACCTCGTGC 636
consensus_15298#0      TCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAACC 1133
consensus_15298#4      TGAAACAGGGCGCAACG---ATAGTTGATCTTTCTGTCATCATCGC-------------- 473
                       *      *     ** *   **  *  * ** * * *  *  *                 

consensus_15298#2      TTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCAAAAAAAAAAAAAAAAAAAAAAAA 637
consensus_15298#5      TTGGCAAAAAAAAAAAAAA----------------------------------------- 227
consensus_15298#1      TTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCATGTTGATGTTGGTTCAAAAAAAA 709
consensus_15298#3      ------------------------------------------------------------
consensus_15298#0      TTGGCAAAAGTTGTGGAAAGCTCCTTTAATAATGTCAAAAAAAAAAAAAAAAAAAAAAAA 1193
consensus_15298#4      ------------------------------------------------------------
                                                                                   

consensus_15298#2      AAAAAAAAAAAAAAAAAAAAAAA---- 660
consensus_15298#5      ---------------------------
consensus_15298#1      AA------------------------- 711
consensus_15298#3      ---------------------------
consensus_15298#0      AAAAAAAAATGCCGTTATTTAGCGTAT 1220
consensus_15298#4      ---------------------------