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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15320#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1008 fasta sequence
[GACCTGACTGGACTGAGGAGTAGAAAATCTTGCTTATATTTTTGCCAAAAAAAAAGAAAAAAAAAAGAGAGAAAGGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT--CCAGG-TTGCT-GTGGGCTT--CCCGCGCCGCCTCCTACCTCAAGATCT-CCACTTTCCCCAGGG-CCTTCTCC--ACCGTGCTGAAGGATCTG-AAGTATGCTGACACT-CAT-GAAT-GGGTTA-A-GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG-CCCAGCACCATTTGGGTGA-TGTTGTGTATGT-GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC-TTTGGTGC-TGTTG-AAAGTGTGAAGGCAACCAGCGAT-ATCT-AC-TC-TCCAGTATCTGGAGA-GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA-CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA-GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTATTTCTGAAACGTGTGCTTCGTTTAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF321207 [GACCTGACTGGACTGAGGAGTAGAAAATCTTGCTTATATTTTTGCCAAAAAAAAAGAAAAAAAAAAGAGAGAAAGGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGT ]
[+] EMBL CF301592 [ AGGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTG ]
[+] EMBL CF310642 [ GGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTANGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGACAGCAAGCATT ]
[+] EMBL AK058912 [ GCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTATTTCTGAAACGTGTGCTTCG ]
[+] EMBL CF337680 [ GCAGAGAAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCA G TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AA TATGCTGACACT CAT GAAT GGGTTA A GTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TC ]
[+] EMBL CF291631 [ aggagtaaaAGA AAAAGAAGAGAGAGAGAGAGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGA ]
[+] EMBL OSS1529A [ GAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTTGGTGA TGTTGTGTATTT GGAGCTTTCAGAAGTT ]
[+] EMBL AK100893 [ GAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTATTTCTGAAACGTGTGCTT ]
[+] EMBL C97149 [ AGACAGACAGAGTGCGGCG CGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGG CGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGTNGGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAACTTTTGGTGCTTGTTGAAAAGTGTGAAGGCAACCAGCGAT ATCT ACTTT TCCAGTATTTGGAGA GGTTGTT ]
[+] EMBL CF322243 [ CAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCATGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTANGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCGAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGAT ]
[+] EMBL C26203 [ AGTGCGGCGCCGAGGAGGAGAGGAGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TNTTG AAAGTGTGAAGG AACCAGCGAT ATCT AC TCTTCCAGTATCTGGAGAGGGTGGTTGCAGTGAACGATGGNCTAGGCGATGNACCTGGATTGGNTAATA CAAGTCCATACGA ]
[+] EMBL CF279355 [ TGCGGCGCCGAGGAGGAGAGGGGCAATAATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCT TCCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTATATGGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCAT ]
[+] EMBL CB000133 [ AGAGGAGCAATAATCCAATTCCAATCCATTCCCCCTCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGAC ]
[+] EMBL OSR04591A [ ccgATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCT CCAGG TTGCT GTGGGCTT CCCGCGCCGCCTCCTACCTCAAGATCT CCACTTTCCCCAGGG CCTTCTCC ACCGTGCTGAAGGATCTG AAGTATGCTGACACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTNTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCTAAC TC TCCAGTATCTGGAGA GGT ]
[+] EMBL AU100677 [ cCCATGGCCCCCTTCCCAGGTTTGCTNTTGGGCTTNCCCCGGNCGGCTTCNTACCTCANGATCTCCCATTTTCCCCAGGGCCCTTNTCCCNCCCTTGCTGAAGGATCTGAAAGTATGCTGACACTCCATGGAATGGGGTTA A GGTTGAGGNTGATTCGGCACCCGTTGGAATTACAGACCATGCCCCAGCCCCATTTGGNTGANTGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTATTTCTGAAACGTGTGCTTCGTTTAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF279354 [ ACT CAT GAAT GGGTTA A GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAAaaaaaa ]
[-] EMBL CF291630 [ GGTTGAGGGTGATTCGGCAACCGTTGGAATTACAGACCATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGATAATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAaaaaaaaaa ]
[-] EMBL CF322244 [ CATG CCCAGCACCATTTGGGTGA TGTTGTGTATGT GGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAAC TTTGGTGC TGTTG AAAGTGTGAAGGCAACCAGCGAT ATCT AC TC TCCAGTATCTGGAGA GGTGGTTGCAGTGAACGATGGACTAGGCGATGAACCTGGATTGGTTAATA CAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCGAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACAAATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGTTTAaaaaa ]
[+] EMBL AU031674 [ GAACCTGGATTGGTTAATACCAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTCTGCGAGGAAGAAGATNGCAAGCATTGAACAAATACCA GTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTCAAaaaaa ]
[+] EMBL BI807128 [ AAGAAGATAGCAAGCATTGAAC AATACCACGTGACTTGTGATCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTATCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATC ACACATGAATAAATTAGTGTTGGCATTGCCTCTTCCAC AAGAGTTGC AACTTCGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGTATCGCGTGATTTCATCTTC ATTGTAaaaaaa ]
consensusID : consensus_15320#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence
[AGGCGATGAACCTGGATTGGTTAATACAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTTTGCGAGGAAGAAGATAGCAAGCCTTGAACAAATACCAGTGACTTGTGATTTGCAAAGAATGCGCCTTGACCCTTTTGTCAAAGCTTGTGATGTGCTATCGAGCACTTATCTTTACCCCCGGCTGGTCCTGAAATCAGCCCCGGTCCACACATGAATAAATTAGTGGTGGCATTGCCTTTTCCCCAAAAAGTTGCAAACTTTGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGGATCGGGTGATTTCATTTTCAATTGTAGCTTTGCCGCCTTTGCTCCGTTTATTTTTGAAACGTGTGCTTCGTTTACTTTTGAATCGTGTGTTCTTGGTGTTTACGAGCCTGCATTATGTTGAGAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF337681 [AGGCGATGAACCTGGATTGGTTAATACAAGTCCATACGAGAGTGGGTGGATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAATACTCGAAATTTTGCGAGGAAGAAGATAGCAAGCCTTGAACAAATACCAGTGACTTGTGATTTGCAAAGAATGCGCCTTGACCCTTTTGTCAAAGCTTGTGATGTGCTATCGAGCACTTATCTTTACCCCCGGCTGGTCCTGAAATCAGCCCCGGTCCACACATGAATAAATTAGTGGTGGCATTGCCTTTTCCCCAAAAAGTTGCAAACTTTGAACCTGTAAATGACATGAGTTTCGTTATTTCTTTGTAGGATCGGGTGATTTCATTTTCAATTGTAGCTTTGCCGCCTTTGCTCCGTTTATTTTTGAAACGTGTGCTTCGTTTACTTTTGAATCGTGTGTTCTTGGTGTTTACGAGCCTGCATTATGTTGAGAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15320#0 GACCTGACTGGACTGAGGAGTAGAAAATCTTGCTTATATTTTTGCCAAAAAAAAAGAAAA 60
consensus_15320#1 ------------------------------------------------------------
consensus_15320#0 AAAAAAGAGAGAAAGGAGCCACCAAACCCAGAACCCGCAGAGAAAAGAAGAGAGAGAGAG 120
consensus_15320#1 ------------------------------------------------------------
consensus_15320#0 AGAGATCAGAGGAGAGAGAGAGACAGACAGAGTGCGGCGCCGAGGAGGAGAGGAGCAATA 180
consensus_15320#1 ------------------------------------------------------------
consensus_15320#0 ATCCAATTCCAATCCATTCCTCCGCGACCTCGTCGTCCGATCATGGCCATGGCCGCCTCC 240
consensus_15320#1 ------------------------------------------------------------
consensus_15320#0 AGGTTGCTGTGGGCTTCCCGCGCCGCCTCCTACCTCAAGATCTCCACTTTCCCCAGGGCC 300
consensus_15320#1 ------------------------------------------------------------
consensus_15320#0 TTCTCCACCGTGCTGAAGGATCTGAAGTATGCTGACACTCATGAATGGGTTAAGGTTGAG 360
consensus_15320#1 ------------------------------------------------------------
consensus_15320#0 GGTGATTCGGCAACCGTTGGAATTACAGACCATGCCCAGCACCATTTGGGTGATGTTGTG 420
consensus_15320#1 ------------------------------------------------------------
consensus_15320#0 TATGTGGAGCTTCCAGAAGTTGGCAGCAGTGTATCCCAGGGAAAGAACTTTGGTGCTGTT 480
consensus_15320#1 ------------------------------------------------------------
consensus_15320#0 GAAAGTGTGAAGGCAACCAGCGATATCTACTCTCCAGTATCTGGAGAGGTGGTTGCAGTG 540
consensus_15320#1 ------------------------------------------------------------
consensus_15320#0 AACGATGGACTAGGCGATGAACCTGGATTGGTTAATACAAGTCCATACGAGAGTGGGTGG 600
consensus_15320#1 -----------AGGCGATGAACCTGGATTGGTTAATACAAGTCCATACGAGAGTGGGTGG 49
*************************************************
consensus_15320#0 ATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAA 660
consensus_15320#1 ATCATCAAGGTCAAGGTTAGTGATTCAGGTGAGCTCAATTCATTGATGGATGACGCGAAA 109
************************************************************
consensus_15320#0 TACTCGAAATTCTGCGAGGAAGAAGATAGCAAGCATTGAACAAATACCAGTGACTTGTGA 720
consensus_15320#1 TACTCGAAATTTTGCGAGGAAGAAGATAGCAAGCCTTGAACAAATACCAGTGACTTGTGA 169
*********** ********************** *************************
consensus_15320#0 TCTGCAAAGAATGCGCCTTGACCCTTTTGTCAATGCTTGTGATGTGCTATCGAGCACTTA 780
consensus_15320#1 TTTGCAAAGAATGCGCCTTGACCCTTTTGTCAAAGCTTGTGATGTGCTATCGAGCACTTA 229
* ******************************* **************************
consensus_15320#0 TCTTTACCACCGGCTGCTCCTGAAATCAGCACCGATCAACACATGAATAAATTAGTGTTG 840
consensus_15320#1 TCTTTACCCCCGGCTGGTCCTGAAATCAGCCCCGGTCCACACATGAATAAATTAGTGGTG 289
******** ******* ************* *** ** ******************* **
consensus_15320#0 GCATTGCCTCTTCCACAAAGAGTTGCAAACTTCGAACCTGTAAATGACATGAGTTTCGTT 900
consensus_15320#1 GCATTGCCTTTTCCCCAAAAAGTTGCAAACTTTGAACCTGTAAATGACATGAGTTTCGTT 349
********* **** **** ************ ***************************
consensus_15320#0 ATTTCTTTGTAGTATCGCGTGATTTCATCTTCAATTGTAGCTCTGCCGCCTCTGCTCCGT 960
consensus_15320#1 ATTTCTTTGTAGGATCGGGTGATTTCATTTTCAATTGTAGCTTTGCCGCCTTTGCTCCGT 409
************ **** ********** ************* ******** ********
consensus_15320#0 TTATTTCTGAAACGTGTGCTTCGTTTAAAAAAAAAAAAAAAAAAAAAA------------ 1008
consensus_15320#1 TTATTTTTGAAACGTGTGCTTCGTTTACTTTTGAATCGTGTGTTCTTGGTGTTTACGAGC 469
****** ******************** **
consensus_15320#0 ----------------------------------------
consensus_15320#1 CTGCATTATGTTGAGAAAAAAAAAAAAAAAAAAAAAAAAA 509
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||