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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15341#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1872 fasta sequence
[AAAAATTTGGGAGACCACCCACAAATCGCTCGTCGGCGAGCGAA-TCCAAACCAAATCCTTGTTCTAGTCTTGTATCACCCGCATCTGCGCGTCCCTCTGCGGCGGCGGCGGCGGCGACGGCGGCGATGGGGCTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGCCCGGCGCCGCGGGGCGGCACCT-CTACGCGGGGCTCACCGGCGCCGCGC-TTTCCTACCTC-TCG-TTC-GGGGCCAC-ATCC-AACCTCCTCTTCGTCGTGCCCATGGCGTTCGGGTACCTCGCCATGCTCCTCTGCCGCCGGCTCGC-GGGGC-TCGTCACCTTCCTCGG-CGCCTTCGGCTTCCTCATCGCATGTCACATGTACTAC-ATGAGT-GGAGATGC-ATGGAAGGA-GGGTGGCATTGATGC-AACAGGTGCTTTAATGGTTTTAACATTGAAAATCATTTCATGTGCAATAAACTACAGTGACGGTATGTTGAAGGAAGAGGGTTTGCGTGATGCCCAGAAAAAGTATCGTTTGGCTAAACTTCCTTCTTTGATCGAATATTTTGGCTACTGCCTCTGCTGTGGCAGCCATTTTGCTGGGCCAGTATATGAGATGAAAGATTATCTTGAATATACTGAACGGAAAGGATTATGGGCCAGCCCAACTCCTTCACCACTATTGCCTACTTTGCGTGCTCTAGTTCAAGCTGGCGCATGTATGGGGTTATATTTGTATCTATCACCTCAATTTCCACTTTCACGGTTTAGCGAGCCCTTATATTATGAGTGGGGTTTCTGGCACCGGCTCTTCTATCAGTACATGTCAGGCTTTACTGCTCGTTGGAAATACTACTTTATATGGTCACTTTCAGAAGCTGCAATCATTATATCTGGTCTGGGTTTTAGCGGCTGGTCTGATTCATCTCCCCCGAAAGCCAAATGGGATCGTGCAAAAAATGTTGATGTTTTAGGTGTCGAATTAGCTACAAGTGCAGTTCAGTTGCCGCTTATGTGGAACATTCAAGTGAGCACATGGCTGCGATACTATGTTTATGAGAGGTTAGTTCAGAAAGGAAAGAAACCTGGTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCGGATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACAGATGGCAACAAGCAGTCAGC-AAT-CCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACA-ATTGTTCCCATTGTAGTTGTCTTGCTGGGTTATGTTATCAAGCCAGCCAGGCCAGTGAAGCCAAAGGCTCGGAAGGCA-GAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTT-AATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTACAACTACATAGGATATCGGCCTTGCGCCTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATTTTTTATCACCTTCCCTGGCCTGGAGCCAAATGGAGGTGTGAATGGGCATCATTTCTTGGTTCAAAAAAAAGA]
[+] EMBL CB633083 [AAAAATTTGGGAGACCACCCACAAATCGCTCGTCGGCGAGCGAA TCCAAACCAAATCCTTGTTCTAGTCTTGTATCACCCGCATCTGCGCGTCCCTCTGCGGCGGCGGCGGCGGCGACGGCGGCGATGGGGCTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGCCCGGCGCCGCGGGGCGGCACCT CTACGCGGGGCTCACCGGCGCCGCGC TCTCCTACCTC TCG TTC GGGGCCAC ATCC AACCTCCTCTTCGTCGTGCCCATGGCGTTCGGGTACCTCGCCATGCTCCTCTGCCGCCGGCTCGC GGGGC TCGTCACCTTCCTCGG CGCCTTCGGCTTCCTCATCGCATGTCACATGTACTAC ATGAGT GGAGATGC ATGGAAGGA GGGTGGCATTGATGC AACAGGTGCTTTAATGGTTTTAACATTGAAAATCATTTCATGTGCAATAAACTACAGTGACGGTATGTTGAAGGAAGAGGGTTTGCGTGATGCCCAGAAAAAGTATCGTTTGGCTAAACTTCCTTCTTTGATCGAATATTTTGGCTACTGCCTCTGCTGTGGCAGCCATTTTGCTGGGCCAGTATATGAGATGAAAGATTATCTTGAATATACTGAACGGAAAGGATTATGGGCCAGCCCAACTCCTTCACCACTATTGCCTACTTTGCGTGCTCTAGTTCAAGCTGGCGCATGTATGGGGTTATATTTGTATCTATCACCTNCATT ]
[+] EMBL CB621270 [ GGAGACCACCCACAAATCGCTCGTCGGCGAGCGAA TCCAAACCAAATCCTTGTTCTAGTCTTGTATCACCCGCATCTGCGCGTCCCTCTGCGGCGGCGGCGGCGGCGACGGCGGCGATGGGGCTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGCCCGGCGCCGCGGGGCGGCACCT CTACGCGGGGCTCACCGGCGCCGCGC TCTCCTACCTC TCG TTC GGGGCCAC ATCC AACCTCCTCTTCGTCGTGCCCATGGCGTTCGGGTACCTCGCCATGCTCCTCTGCCGCCGGCTCGC GGGGC TCGTCACCTTCCTCGG CGCCTTCGGCTTCCTCATCGCATGTCACATGTACTAC ATGAGT GGAGATGC ATGGAAGGA GGGTGGCATTGATGC AACAGGTGCTTTAATGGTTTTAACATTGAAAATCATTTCATGTGCAATAAACTACAGTGACGGTATGTTGAAGGAAGAGGGTTTGCGTGATGCCCAGAAAAAGTATCGTTTGGCTAAACTTCCTTCTTTGATCGAATATTTTGGCTACTGCCTCTGCTGTGGCAGCCATTTTGCTGGGCCAGTATATGAGATGAAAGATTATCTTGAATATACTGAACGGAAAGGATTATGGGCCAGCCCAACTCCTTCACCACTATTGCCTACTTTGCGTGCTCTAGTTCAAGCTGGCGCATGTATGGGGTTATATTTGTATCTATCACCTCA ]
[+] EMBL OSS11682A [ GAGACCACCCACAAATCGCTCGTCGGCGAGCGAA TCCAAACCAAATCCTTGTTCTAGTCTTGTATCACCCGCATCTGCGCGTCCCTCTGCGGCGGCGGCGGCGGCGACGGCGGCGATGGGGCTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGNCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGCCCGGCGCCGCGGGGNGGNACCTNTTACGCGGGGCTCAACGGCGCCGNGCTTTTCCTACCTCTTCGTTTCGGGGGCCACAATCCAAACCTnac ]
[+] EMBL OSS11617A [ GAGACCACCCACAAATCGCTCGTCGGCGAGCGAATTCCAAACCAAATCCTTGTTCTAGTCTTGTATCACCCGCATCTGCGCGTCCCTCTGCGGCGGCGGCGGCGGCGACGGCGGCGATGGGGNTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTG CCGGCGCCGCGGGG GGNACCT CTACGCGGGG TNAACGGCGCCGNG TTTCCTANCTC TCG TTC GGGG CAN ATTC AANCTTCTCTTCGTCGT NCCAT GNGTTCGGGTACtng ]
[+] EMBL AK073916 [ ACCCACAAATCGCTCGTCGGCGAGCGAA TCCAAACCAAATCCTTGTTCTAGTCTTGTATCACCCGCATCTGCGCGTCCCTCTGCGGCGGCGGCGGCGGCGACGGCGGCGATGGGGCTGGAGAT GAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGCCCGGCGCCGCGGGGCGGCACCT CTACGCGGGGCTCACCGGCGCCGCGC TTTCCTACCTC TCG TTC GGGGCCAC ATCC AACCTCCTCTTCGTCGTGCCCATGGCGTTCGGGTACCTCGCCATGCTCCTCTGCCGCCGGCTCGC GGGGC TCGTCACCTTCCTCGG CGCCTTCGGCTTCCTCATCGCATGTCACATGTACTAC ATGAGT GGAGATGC ATGGAAGGA GGGTGGCATTGATGC AGCAGGTGCTTTAATGGTTTTAACATTGAAAATCATTTCATGTGCAATAAACTACAGTGACGGTATGTTGAAGGAAGAGGGTTTGCGTGATGCCCAGAAAAAGTATCGTTTGGCTAAACTTCCTTCTTTGATCGAATATTTTGGCTACTGCCTCTGCTGCGGCAGCCATTTTGCTGGGCCAGTATATGAGATGAAAGATTATCTTGAATATACTGAACGGAAAGGATTATGGGCCAGCCCAACTCCTTCACCACTATTGCCTACTTTGCGTGCTCTAGTTCAAGCTGGCGCATGTATGGGGTTATATTTGTATCTATCACCTCAATTTCCACTTTCACGGTTTAGCGAGCCCTTATATTATGAGTGGGGTTTCTGGCACCGGCTCTTCTATCAGTACATGTCAGGCTTTACTGCTCGTTGGAAATACTACTTTATATGGTCACTTTCAGAAGCTGCAATCATTATATCTGGTCTGGGTTTTAGCGGCTGGTCTGATTCATCTCCCCCGAAAGCCAAATGGGATCGTGCAAAAAATGTTGATGTTTTAGGTGTCGAATTAGCTACAAGTGCAGTTCAGTTGCCGCTTATGTGGAACATTCAAGTGAGCACATGGCTGCGATACTATGTTTATGAGAGGTTAGTTCAGAAAGGAAAGAAACCTGGTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCGGATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACAGATGGCAACAAGCAGTCAGC AAT CCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACA ATTGTTCCCATTGTAGTTGTCTTGCTGGGTTATGTTATCAAGCCAGCCAGGCCAGTGAAGCCAAAGGCTCGGAAGGCA GAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTT AATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTACAACTACATAGGATATCGGCCTTGCGCCT ]
[+] EMBL AU091652 [ AATCCTTGTNCTAGTCTTGTATCACCCGCATCTNCGCGTCCNTNTNCGGCGGCGGCGGCGGCGACGGCGGCGATGGGGCTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGCCCGGCGCCGCGGGGCGGCACCT CTACGCGGGGCTCACCGGCGCCGCGC TTTCCTACCTC TCG TTC GGGGCCAC ATCC AACCTCCTCTTCGTCGTGCCCATGGCGTTCGGGTACCTCGCCATGCTCCTCTGCCGCCGGCTCGCGGGGGC TCGTNAACTTCCTCGGNGGCCTTCGGNTTCCTCATCGAATGTNACATGTACTACAATGAGTNGAAGATTCAATTGAAGGAGGGGTGGNATTGATGCAAACAGGTG ]
[+] EMBL CB656427 [ CTGCGCGTCCCTCTGCGGCGGCGGCGGCGGCGACGGCGGCGATGGGGCTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGCCCGGCGCCGCGGGGCGGCACCT CTACGCGGGGCTCACCGGCGCCGCGC TTTCCTACCTC TCG TTC GGGGCCAC ATCC AACCTCCTCTTCGTCGTGCCCATGGCGTTCGGGTACCTCGCCATGCTCCTCTGCCGCCGGCTCGC GGGGC TCGTCACCTTCCTCGG CGCCTTCGGCTTCCTCATCGCATGTCACATGTACTAC ATGAGT GGAGATGC ATGGAAGGA GGGTGGCATTGATGC AACAGGTGCTTTAATGGTTTTAACATTGAAAATCATTTCATGTGCAATAAACTACAGTGACGGTATGTTGAAGGAAGAGGGTTTGCGTGATGCCCAGAAAAAGTATCGTTTGGCTAAACTTCCTTCTTTGATCGAATATTTTGGCTACTGCCTCTGCTGTGGCAGCCATTTTGCTGGGCCAGTATATGAGATGAAAGATTATCTTGAATATACTGAACGGAAAGGATTATGGGCCAGCCCAACTCCTTCACCACTATTGCCTACTTTGCGTGCTCTAGTTCAAGCTGGCGCATGTATGGGGTTATATTTGTATCTATCACCTCAATTTCCACTTTCACGGTTTAGCGAGCCCTTATATTATGAGTGGGGTTTCTGGCACCG ]
[+] EMBL AU093540 [ CTCTGNGGCGGNGGCGGCGGCGACGGCGGCGATGGGGCTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGCCCGGCGCCGCGGGGC GCACCT CTACGCGGGGCTCACCGGCGCCGCGC TTTCCTACCTC TCG TTC GGGGCCAC ATCC AACCTCCTCTTCGTCGTGCCCATGGCGTTCGGGTA CTCGCCATGCTCCTCTGCCGCCGGCTCGC GGGGCTTCGTCACCTTCCTCGG CGCCTTCGGCTTCCTCATCGCATGTCACATGTACTAC ATGAGT GGAGATGC ATGGAAGGA NGGTGGCATTG ]
[+] EMBL CB655925 [ GCGGCGGCGGCGGCGGCGACGGCGGCGATGGGGCTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGCTCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGCCCGGCGCCGCGGGGCGGCACCT CTACGCGGGGCTCACCGGCGCCGCGC TTTCCTACCTC TCG TTC GGGGCCAC ATCC AACCTCCTCTTCGTCGTGCCCATGGCGTTCGGGTACCTCGCCATGCTCCTCTGCCGCCGGCTCGC GGGGC TCGTCACCTTCCTCGG CGCCTTCGGCTTCCTCATCGCATGTCACATGTACTAC ATGAGT GGAGATGC ATGGAAGGA GGGTGGCATTGATGC AACAGGTGCTTTAATGGTTTTAACATTGAAAATCATTTCATGTGCAATAAACTACAGTGACGGTATGTTGAAGGAAGAGGGTTTGCGTGATGCCCAGAAAAAGTATCGTTTGGCTAAACTTCCTTCTTTGATCGAATATTTTGGCTACTGCCTCTGCTGTGGCAGCCATTTTGCTGGGCCAGTATATGAGATGAAAGATTATCTTGAATATACTGAACGGAAAGGATTATGGGCCAGCCCAACTCCTTCACCACTATTGCCTACTTTGCGTGCTCTAGTTCAAGCTGGCGCATGTATGGGGTTATATTTGTATCTATCACCTCAATTTCCACTTTCACGGTTTAGCGAGCCCTTATATTATGAGTGGGGTTTCTGGCACCGGCTCTTCTATCAGTACATGTCAGGCTTTACTGCTCGTTGGAAATA ]
[+] EMBL CA923307 [ GT GGAGATGC ATGGAAGGA GGGTGGCATTGATGC AACAGGTGCTTTAATGGTTTTAACATTGAAAATCATTTCATGTGCAATAAACTACAGTGACGGTATGTTGAAGGAAGAGGGTTTGCGTGATGCCCAGAAAAAGTATCGTTTGGCTAAACTTCCTTCTTTGATCGAATATTTTGGCTACTGCCTCTGCTGTGGCAGCCATTTTGCTGGGCCAGTATATGAGATGAAAGATTATCTTGAATATACTGAACGGAAAGGATTATGGGCCAGCCCAACTCCTTCACCACTATTGCCTACTTTGCGTGCTCTAGTTCAAGCTGGCGCATGTATGGGGTTATATTTGTATCTATCACCTCAATTTCCACTTTCACGGTTTAGCGAGCCCTTATATTATGAGTGGGGTTTCTGGCACCGGCTC ]
[+] EMBL CA882857 [ GT GGAGATGC ATGGAAGGA GGGTGGCATTGATGC AACAGGTGCTTTAATGGTTTTAACATTGAAAATCATTTCATGTGCAATAAACTACAGTGACGGTATGTTGAAGGAAGAGGGTTTGCGTGATGCCCAGAAAAAGTATCGTTTGGCTAAACTTCCTTCTTTGATCGAATATTTTGGCTACTGCCTCTGCTGTGGCAGCCATTTTGCTGGGCCAGTATATGAGATGAAAGATTATCTTGAATATACTGAACGGAAAGGATTATGGGCCAGCCCAACTCCTTCACCACTATTGCCTACTTTGCGTGCTCTAGTTCAAGCTGGCGCATGTATGGGGTTATATTTGTATCTATCACCTCAATTTCCACTTTCACGGTTTAGCGAGCCCTTATATTATGAGTGGGGTTTCTGGCACCGGCTCT ]
[+] EMBL CF306235 [ ACTTTCACGGTTTAGCGAGCCCTTATATTATGAGTGGGGTTTCTGGCACCGGCTCTTCTATCAGTACATGTCAGGCTTTACTGCTCGTTGGAAATACTACTTTATATGGTCACTTTCAGAAGCTGCAATCATTATATCTGGTCTGGGTTTTAGCGGCTGGTCTGATTCATCTCCCCCGAAAGCCAAATGGGATCGTGCAAAAAATGTTGATGTTTTAGGTGTCGAATTAGCTACAAGTGCAGTTCAGTTGCCGCTTATGTGGAACATTCAAGTGAGCACATGGCTGCGATACTATGTTTATGAGAGGTTAGTTCAGAAAGGAAAGAAACCTGGTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCGGATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACAGATGGCAACAAGCAGTCAGC AAT CCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACA ATTGTTCCCATTGTAGTTGTCTTGCTGGGTTAT ]
[-] EMBL CB633084 [ TTGCCGCTTATGTGGAACATTCAAGTGAGCACATGGCTGCGATACTATGTTTATGAGAGGTTAGTTCAGAAAGGAAAGAAACCTGGTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCGGATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACAGATGGCAACAAGCAGTCAGC AAT CCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGCATTGGGTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACA ATTGTTCCCATTGTAGTTGTCTTGCTGGGTTATGTTATCAAGCCAGCCAGGCCAGTGAAGCCAAAGGCTCGGAAGGCA GAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTT AATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTACAACTACATAGGATATCGGCCTTGCGCCTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTTATTCAAAGCGATGTATTTTTTATCACCTTCCCTGGCCTGGAGCCAAATGGAGGTGTGAATGGGCATCATT ]
[-] EMBL CB655926 [ TATGTGGANCATTCAAGTGAGCACATGGCTGCGATACTATGTTTATGAGAGGTTAGTTCAGAAAGGAAAGAAACCTGGTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCGGATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACAGATGGCAACAAGCAGTCAGC AAT CCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACA ATTGTTCCCATTGTAGTTGTCTTGCTGGGTTATGTTATCAAGCCAGCCAGGCCAGTGAAGCCAAAGGCTCGGAAGGCA GAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTT AATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTACAACTACATAGGATATCGGCCTTGCGCCTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATTTTTTATCACCTTCCCTGGCCTGGAGCCAAATGGAGGTGTGAATGGGCATCATTTCTTGGTTCAAAAAAAAGA]
[+] EMBL AK059030 [ GTTCAGAAAGGAAAGAAACCTGGTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCGGATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACAGATGGCAACAAGCAGTCAGC AAT CCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACA ATTGTTCCCATTGTAGTTGTCTTGCTGGGTTATGTTATCAAGCCAGCCAGGCCAGTGAAGCCAAAGGCTCGGAAGGCA GAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTT AATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTACAACTACATAGGATATCGGCCTTGCGCCTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATTTTTTATCACCTTCCCTGGCCTGGAGCCAAATGGAGGTGTGAATGGGCATCAT ]
[+] EMBL AU091653 [ acGGCAACAAGCAGTCAGCAAATCCCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTNCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTNCCAGAGCGTATATTATATCGGCACA ATTGTTCCCATTGTAGTTGTCTTGCTGGGTTATGTTATCAAGCCAGCCAGGCCAGTGAAGCCAAAGGCTCGGAAGGCA GAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTT AATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTACAACTACATAGGATATCGGCCTTGCG CTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATTTTTTATCACCTTCCCTGGCCTGGAGCCAAATGGAGGTGTGAATGGGCATCATTTCTTGGTTCAAAAA ]
[+] EMBL AU095925 [ TTCCACGCTAACCTGGTTTTNGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACA ATTGTTCCCATTGTAGTTGTCTTGCTGGGTTATGTTATCAAGCCAGCCAGGCCAGTGAAGCCAAAGGCTCGGAAGGCA GAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTTNAATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTACAACTACATAGGATATCGGCCTTGCG CTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATTTTTTATCACCTTCCCTGGCCTGGAGCCAAATGGAGGTGTGAATGGGCATCATTTCTTGGTTCAAAAAA ]
[+] EMBL BI810628 [ GATGCCCCTT ACTACTCATCCATTGGTTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACACATTGTTCCCATTGTAGTTGTCTTGCTGGGTTATGTTATCAAGCCAG CAGGCCAGTGAA CCCAAGGCTCGGAA GCACGAATGAGCCACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTT AATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCCAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTACAACTACATAGGATATCGGCCTTGCGCCTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTTATTC AAGCGATGTATTTTTTATCACCTTCCCTGGCCTGGAGCCCAATGGAGGTGTGAATGGGCATCATTTCTTGGTTCAAAAAAAAaa]
[+] EMBL AU095914 [ TCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATTTTTTATCACCTTCCNTGGCCTGGAGCCAAATGGAGGTGTGAATGGGCATCATTTCTTGGTTCAAAAAA ]
consensusID : consensus_15341#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 819 fasta sequence
[GCCGCTTATGTGAACATTCAAGTGAGCACATGGCTGCGATACTATGTTTATGAGAGGTTAGTTCAGAAAGGAAAGAAACCTGGTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCGGATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACAGATGGCAACAAGCAGTCAGCAATCCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACAATTGTT-CCCATTGTAGTTGTCTTGCTGGGTTATGTTAT-CAAGCCAGCCAGG-CCAGTGAAGCCAAAGGCTCGGAAGGCAGAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTTAATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTCCAACTACATAGGATA-TCGGCCTTGCGCCTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATTTTTTATCACCTTCCCTGGCCTGGAGCCAAATGAAGGTGTGAATGGGCATCATTTCTTGGTTCCCATCCCCTAAAAGA]
[-] EMBL CB656428 [GCCGCTTATGTGAACATTCAAGTGAGCACATGGCTGCGATACTATGTTTATGAGAGGTTAGTTCAGAAAGGAAAGAAACCTGGTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCGGATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACAGATGGCAACAAGCAGTCAGCAATCCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTTCATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGGAAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACAATTGTT CCCATTGTAGTTGTCTTGCTGGGTTATGTTAT CAAGCCAGCCAGG CCAGTGAAGCCAAAGGCTCGGAAGGCAGAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTTAATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTCCAACTACATAGGATA TCGGCCTTGCGCCTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATTTTTTATCACCTTCCCTGGCCTGGAGCCAAATGAAGGTGTGAATGGGCATCATTTCTTGGTTCCCATCCCCTAAAAGA]
[+] EMBL AU093541 [ TCGGCACAATTGTTCCCCATTGTAGTTGTCTTGCTGGGTTATGTTATCCAAGCCAGCCAGGCCCAGTGAAGCCAAAGGCTCGGAAGGCAGAATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATTTAATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAATGTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTGGCACTCCCGTTGGATTTTTCTTCTATGTTATGANTACTACTNCAANTANATAGGATATTCGGCCTTGC NNTTCGGTTGTTGAaataa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15341#0 AAAAATTTGGGAGACCACCCACAAATCGCTCGTCGGCGAGCGAATCCAAACCAAATCCTT 60
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 GTTCTAGTCTTGTATCACCCGCATCTGCGCGTCCCTCTGCGGCGGCGGCGGCGGCGACGG 120
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 CGGCGATGGGGCTGGAGATGGAGGGGATGGCGGCGGCGATCGGCGTGTCGGTGCCCGTGC 180
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 TCCGCTTCCTGCTCTGCTTCGCGGCCACCATCCCGACGGGCCTCATGTGGCGGGCGGTGC 240
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 CCGGCGCCGCGGGGCGGCACCTCTACGCGGGGCTCACCGGCGCCGCGCTTTCCTACCTCT 300
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 CGTTCGGGGCCACATCCAACCTCCTCTTCGTCGTGCCCATGGCGTTCGGGTACCTCGCCA 360
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 TGCTCCTCTGCCGCCGGCTCGCGGGGCTCGTCACCTTCCTCGGCGCCTTCGGCTTCCTCA 420
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 TCGCATGTCACATGTACTACATGAGTGGAGATGCATGGAAGGAGGGTGGCATTGATGCAA 480
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 CAGGTGCTTTAATGGTTTTAACATTGAAAATCATTTCATGTGCAATAAACTACAGTGACG 540
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 GTATGTTGAAGGAAGAGGGTTTGCGTGATGCCCAGAAAAAGTATCGTTTGGCTAAACTTC 600
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 CTTCTTTGATCGAATATTTTGGCTACTGCCTCTGCTGTGGCAGCCATTTTGCTGGGCCAG 660
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 TATATGAGATGAAAGATTATCTTGAATATACTGAACGGAAAGGATTATGGGCCAGCCCAA 720
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 CTCCTTCACCACTATTGCCTACTTTGCGTGCTCTAGTTCAAGCTGGCGCATGTATGGGGT 780
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 TATATTTGTATCTATCACCTCAATTTCCACTTTCACGGTTTAGCGAGCCCTTATATTATG 840
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 AGTGGGGTTTCTGGCACCGGCTCTTCTATCAGTACATGTCAGGCTTTACTGCTCGTTGGA 900
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 AATACTACTTTATATGGTCACTTTCAGAAGCTGCAATCATTATATCTGGTCTGGGTTTTA 960
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 GCGGCTGGTCTGATTCATCTCCCCCGAAAGCCAAATGGGATCGTGCAAAAAATGTTGATG 1020
consensus_15341#1 ------------------------------------------------------------
consensus_15341#0 TTTTAGGTGTCGAATTAGCTACAAGTGCAGTTCAGTTGCCGCTTATGTGGAACATTCAAG 1080
consensus_15341#1 -------------------------------------GCCGCTTATGTG-AACATTCAAG 22
************ **********
consensus_15341#0 TGAGCACATGGCTGCGATACTATGTTTATGAGAGGTTAGTTCAGAAAGGAAAGAAACCTG 1140
consensus_15341#1 TGAGCACATGGCTGCGATACTATGTTTATGAGAGGTTAGTTCAGAAAGGAAAGAAACCTG 82
************************************************************
consensus_15341#0 GTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCG 1200
consensus_15341#1 GTTTCCTCCAGTTGCTGGGTACACAGACAGTCAGTGCTGTCTGGCATGGTCTTTATCCCG 142
************************************************************
consensus_15341#0 GATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACA 1260
consensus_15341#1 GATATATCATATTCTTTGTTCAATCAGCATTGATGATAAATGGTTCAAAAGTCATATACA 202
************************************************************
consensus_15341#0 GATGGCAACAAGCAGTCAGCAATCCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTT 1320
consensus_15341#1 GATGGCAACAAGCAGTCAGCAATCCAGTCTTCCACGCTATCCTGGTTTTTGTAAATTTTT 262
************************************************************
consensus_15341#0 CATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGG 1380
consensus_15341#1 CATACACCTTGATGGTCCTTAACTACTCATGTATTGGGTTCCAGGTACTGAGCTTCAAGG 322
************************************************************
consensus_15341#0 AAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACAATTGTTCCCATTGTAGTTG 1440
consensus_15341#1 AAACCCTAGCATCCTACCAGAGCGTATATTATATCGGCACAATTGTTCCCATTGTAGTTG 382
************************************************************
consensus_15341#0 TCTTGCTGGGTTATGTTATCAAGCCAGCCAGGCCAGTGAAGCCAAAGGCTCGGAAGGCAG 1500
consensus_15341#1 TCTTGCTGGGTTATGTTATCAAGCCAGCCAGGCCAGTGAAGCCAAAGGCTCGGAAGGCAG 442
************************************************************
consensus_15341#0 AATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATT 1560
consensus_15341#1 AATGAGCAACAAGTTGACCTGGTCAAGTGGTCATTACATATAGGAGCGACGAAGAACATT 502
************************************************************
consensus_15341#0 TAATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAAT 1620
consensus_15341#1 TAATGACGATAATGACGAACTAGTGTCCAGCTATTCTACTGTGGAATTTCGCAGGAGAAT 562
************************************************************
consensus_15341#0 GTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTG 1680
consensus_15341#1 GTGATGACTCACCTCTTAAAGTTCTGAACTCCCTTGTGATTGATCAAACATTAAAACGTG 622
************************************************************
consensus_15341#0 GCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTACAACTACATAGGATATCG 1740
consensus_15341#1 GCACTCCCGTTGGATTTTTCTTCTATGTTATGACTACTACTCCAACTACATAGGATATCG 682
***************************************** ******************
consensus_15341#0 GCCTTGCGCCTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATT 1800
consensus_15341#1 GCCTTGCGCCTTCGGTTGTTGAGTTCTCTTCTGACCGACTGTCATTCAAAGCGATGTATT 742
************************************************************
consensus_15341#0 TTTTATCACCTTCCCTGGCCTGGAGCCAAATGGAGGTGTGAATGGGCATCATTTCTTGGT 1860
consensus_15341#1 TTTTATCACCTTCCCTGGCCTGGAGCCAAATGAAGGTGTGAATGGGCATCATTTCTTGGT 802
******************************** ***************************
consensus_15341#0 TCAAAA-----AAAAGA 1872
consensus_15341#1 TCCCATCCCCTAAAAGA 819
** * ******
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||