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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15343#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2023 fasta sequence
[GAAAACCCCATGCGACCTCCTCCCCGGCCGCGCCGCCCAGTGCCGGCGCGGCTCGTCGCCGCTGCGGTCCTCCTCTCGGCTCTCGCCGGGGGAGCCGCGGCGGGCGCCGCCATCGCCGGCGATGGGTACGGGCGCGGCAGGAGGCTGTACATGAGGAACAAGGTCCTGGAGATGTTTTACCATGCTTATGACAACTATATGACTTATGCATTTCCACATGATGAATTGAAGCCTCTAACCAAAAGTTTCACTGACTCCCTTAGTGAGCTTGGCAACCTAAATCTTGAACATTTGCCAAATGATTACAATGGATCTGCACTTACACTAGTCGAATCGTTGTCAAGTCTTGTTGTCTTAGGTAACCTCACGGAGTTTGAAAGAGGAGTTCTCTGGCTTTCAGAGAACCTAACATTTGATGTTGATGCTCGAATAAATCTTTTTGAGTGCAACATAAGACTTCTTGGGGGGCTTATTTCTGGTCATATTCTTGCAAAGGAGCACAGCAGTCATCTTAAAGATGGACCATATCAGGACCAGTTACTACATCTTGCTGAAAATTTAGGAAGTCGTTTTCTACCAGCTTTTGAGACACCTACTGGATTGCCATACGCATGGATCAATCTTAAGTATGGAGTGATGGAAAATGAAACAACTGAGACAAGCACATCAGGGTGTGGTTCTCTGATTCTTGAAATGGGTGCATTATCACGTTTGACGGGTGATTCTAGATATGAGGCTGCAGCTCTTCGTGCTCTTCGTAAGTTGTGGAGCATGAGAAGTTCACTAAATCTTGTAGGCACAACCCTTGATGTCTTGACTGGCAAGTGGATTGAATATTCGTCAGGCATTGGTGCTGGAGTTGATTCATTTTATGAGTATTTGATTAAAGCGTATGTTCTTTTCGGAAGCGAAGAATACTGGGATATGTTTCATTCAGCTTACCTTGCAGTGCAGAAGTATTTCCGACATGGCCCATGGTATCATGAGGCTGATATGAGGACCGGAGAAGCAACACACTGGCAACTAACTAGCCTTCAAGCCTTCTGGCCAGGTCTTCAGACACTTCTAGGAGATGTTGCTGCTGCAAATATATCACATCGTGAATTTTACAATGTATGGCAAAGGTTTGGTGTTCTGCCGGAAAGATATCTTTTGGACTTCGGAATGTTGCATCCTACAGAGAAGTATTATCCTTTACGTCCAGAGTTTGCTGAGTCTACATTTTATCTTTATCAAGCAACTAAAGATCCTTGGTATCTAGAAGTTGGTGAAGCTATCATTGGATCCCTTAATTACTATACTAAAGTGGATGGAGGTTTTGCTAGTGTCAGGGATGTTTCGACAATGAAACTTGAAGATCATCAACATAGCTTCTTTCTTTCAGAAACCTGCAAATATCTTTTTCTTCTCTACGATGATTCATTCTTGAGGAACCAAAATTACATATTTACCACGGAGGGTCACCCCCTTCCAATAAGGAGCACATGGCACGAGATAATCCCGACAACGCATGTTCCCAGCAACTGGACATTCGTTAAGGATGACAGCCAACCCTTCCGTGTGAGCGCATTGTCGTCTCAAGTTTGTCCAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCGTGGGAGAGTGCATGCCATGTACCAGACGTGTTACCTACCCACAGATGCAGGACCGATGATGACTGTGGAGTGGAGGCCGTATCATGCAGGAGAAGAACTTGCAGTATGGCTGGCTACTGCGGCTTGTGGCTGGGGGTTTATTAGCTTTTTTTTTTCTGTGGAGATTATACTGTTTCCCATTCTTTAAAGCACAAAAAAGTGAACGTTACTGGACGGCCTCGGCCTGTTACTTCTGTACATTAGAATATATATAGCTAATCGAACAGAATGATAGTAGCAAAGTCGTTGTCCCAGTTGTTAGCGCAGAATGAAACATGTATGCAAATTCTCCTAATGTATTCTTTGCTGATGTAATCTTTTGATTTATTATCAATCTTCCACTCCATAAATAATTAGGCAA]
[+] EMBL AK105716 [GAAAACCCCATGCGACCTCCTCCCCGGCCGCGCCGCCCAGTGCCGGCGCGGCTCGTCGCCGCTGCGGTCCTCCTCTCGGCTCTCGCCGGGGGAGCCGCGGCGGGCGCCGCCATCGCCGGCGATGGGTACGGGCGCGGCAGGAGGCTGTACATGAGGAACAAGGTCCTGGAGATGTTTTACCATGCTTATGACAACTATATGACTTATGCATTTCCACATGATGAATTGAAGCCTCTAACCAAAAGTTTCACTGACTCCCTTAGTGAGCTTGGCAACCTAAATCTTGAACATTTGCCAAATGATTACAATGGATCTGCACTTACACTAGTCGAATCGTTGTCAAGTCTTGTTGTCTTAGGTAACCTCACGGAGTTTGAAAGAGGAGTTCTCTGGCTTTCAGAGAACCTAACATTTGATGTTGATGCTCGAATAAATCTTTTTGAGTGCAACATAAGACTTCTTGGGGGGCTTATTTCTGGTCATATTCTTGCAAAGGAGCACAGCAGTCATCTTAAAGATGGACCATATCAGGACCAGTTACTACATCTTGCTGAAAATTTAGGAAGTCGTTTTCTACCAGCTTTTGAGACACCTACTGGATTGCCATACGCATGGATCAATCTTAAGTATGGAGTGATGGAAAATGAAACAACTGAGACAAGCACATCAGGGTGTGGTTCTCTGATTCTTGAAATGGGTGCATTATCACGTTTGACGGGTGATTCTAGATATGAGGCTGCAGCTCTTCGTGCTCTTCGTAAGTTGTGGAGCATGAGAAGTTCACTAAATCTTGTAGGCACAACCCTTGATGTCTTGACTGGCAAGTGGATTGAATATTCGTCAGGCATTGGTGCTGGAGTTGATTCATTTTATGAGTATTTGATTAAAGCGTATGTTCTTTTCGGAAGCGAAGAATACTGGGATATGTTTCATTCAGCTTACCTTGCAGTGCAGAAGTATTTCCGACATGGCCCATGGTATCATGAGGCTGATATGAGGACCGGAGAAGCAACACACTGGCAACTAACTAGCCTTCAAGCCTTCTGGCCAGGTCTTCAGACACTTCTAGGAGATGTTGCTGCTGCAAATATATCACATCGTGAATTTTACAATGTATGGCAAAGGTTTGGTGTTCTGCCGGAAAGATATCTTTTGGACTTCGGAATGTTGCATCCTACAGAGAAGTATTATCCTTTACGTCCAGAGTTTGCTGAGTCTACATTTTATCTTTATCAAGCAACTAAAGATCCTTGGTATCTAGAAGTTGGTGAAGCTATCATTGGATCCCTTAATTACTATACTAAAGTGGATGGAGGTTTTGCTAGTGTCAGGGATGTTTCGACAATGAAACTTGAAGATCATCAACATAGCTTCTTTCTTTCAGAAACCTGCAAATATCTTTTTCTTCTCTACGATGATTCATTCTTGAGGAACCAAAATTACATATTTACCACGGAGGGTCACCCCCTTCCAATAAGGAGCACATGGCACGAGATAATCCCGACAACGCATGTTCCCAGCAACTGGACATTCGTTAAGGATGACAGCCAACCCTTCCGTGTGAGCGCATTGTCGTCTCAAGTTTGTCCAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCGTGGGAGAGTGCATGCCATGTACCAGACGTGTTACCTACCCACAGATGCAGGACCGATGATGACTGTGGAGTGGAGGCCGTATCATGCAGGAGAAGAACTTGCAGTATGGCTGGCTACTGCGGCTTGTGGCTGGGGGTTTATTAGCTTTTTTTTTTCTGTGGAGATTATACTGTTTCCCATTCTTTAAAGCACAAAAAAGTGAACGTTACTGGACGGCCTCGGCCTGTTACTTCTGTACATTAGAATATATATAGCTAATCGAACAGAATGATAGTAGCAAAGTCGTTGTCCCAGTTGTTAGCGCAGAATGAAACATGTATGCAAATTCTCCTAATGTATTCTTTGCTGATGTAATCTTTTG ]
[+] EMBL AK120667 [ ACCCCATGCGACCTCCTCCCCGGCCGCGCCGCCCAGTGCCGGCGCGGCTCGTCGCCGCTGCGGTCCTCCTCTCGGCTCTCGCCGGGGGAGCCGCGGCGGGCGCCGCCATCGCCGGCGATGGGTACGGGCGCGGCAGGAGGCTGTACATGAGGAACAAGGTCCTGGAGATGTTTTACCATGCTTATGACAACTATATGACTTATGCATTTCCACATGATGAATTGAAGCCTCTAACCAAAAGTTTCACTGACTCCCTTAGTGAGCTTGGCAACCTAAATCTTGAACATTTGCCAAATGATTACAATGGATCTGCACTTACACTAGTCGAATCGTTGTCAAGTCTTGTTGTCTTAGGTAACCTCACGGAGTTTGAAAGAGGAGTTCTCTGGCTTTCAGAGAACCTAACATTTGATGTTGATGCTCGAATAAATCTTTTTGAGTGCAACATAAGACTTCTTGGGGGGCTTATTTCTGGTCATATTCTTGCAAAGGAGCACAGCAGTCATCTTAAAGATGGACCATATCAGGACCAGTTACTACATCTTGCTGAAAATTTAGGAAGTCGTTTTCTACCAGCTTTTGAGACACCTACTGGATTGCCATACGCATGGATCAATCTTAAGTATGGAGTGATGGAAAATGAAACAACTGAGACAAGCACATCAGGGTGTGGTTCTCTGATTCTTGAAATGGGTGCATTATCACGTTTGACGGGTGATTCTAGATATGAGGCTGCAGCTCTTCGTGCTCTTCGTAAGTTGTGGAGCATGAGAAGTTCACTAAATCTTGTAGGCACAACCCTTGATGTCTTGACTGGCAAGTGGATTGAATATTCGTCAGGCATTGGTGCTGGAGTTGATTCATTTTATGAGTATTTGATTAAAGCGTATGTTCTTTTCGGAAGCGAAGAATACTGGGATATGTTTCATTCAGCTTACCTTGCAGTGCAGAAGTATTTCCGACATGGCCCATGGTATCATGAGGCTGATATGAGGACCGGAGAAGCAACACACTGGCAACTAACTAGCCTTCAAGCCTTCTGGCCAGGTCTTCAGACACTTCTAGGAGATGTTGCTGCTGCAAATATATCACATCGTGAATTTTACAATGTATGGCAAAGGTTTGGTGTTCTGCCGGAAAGATATCTTTTGGACTTCGGAATGTTGCATCCTACAGAGAAGTATTATCCTTTACGTCCAGAGTTTGCTGAGTCTACATTTTATCTTTATCAAGCAACTAAAGATCCTTGGTATCTAGAAGTTGGTGAAGCTATCATTGGATCCCTTAATTACTATACTAAAGTGGATGGAGGTTTTGCTAGTGTCAGGGATGTTTCGACAATGAAACTTGAAGATCATCAACATAGCTTCTTTCTTTCAGAAACCTGCAAATATCTTTTTCTTCTCTACGATGATTCATTCTTGAGGAACCAAAATTACATATTTACCACGGAGGGTCACCCCCTTCCAATAAGGAGCACATGGCACGAGATAATCCCGACAACGCATGTTCCCAGCAACTGGACATTCGTTAAGGATGACAGCCAACCCTTCCGTGTGAGCGCATTGTCGTCTCAAGTTTGTCCAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCGTGGGAGAGTGCATGCCATGTACCAGACGTGTTACCTACCCACAGATGCAGGACCGATGATGACTGTGGAGTGGAGGCCGTATCATGCAGGAGAAGAACTTGCAGTATGGCTGGCTACTGCGGCTTGTGGCTGGGGGTTTATTAGCTTTTTTTTTTCTGTGGAGATTATACTGTTTCCCATTCTTTAAAGCACAAAAAAGTGAACGTTACTGGACGGCCTCGGCCTGTTACTTCTGTACATTAGAATATATATAGCTAATCGAACAGAATGATAGTAGCAAAGTCGTTGTCCCAGTTGTTAGCGCAGAATGAAACATGTATGCAAATTCTCCTAATGTATTCTTTGCTGATGTAATCTTTTGATTTATTATCAATCTTCCACTCCATAAA ]
[-] EMBL CB636428 [ TGCAAATATCTTTTTCTTCTCTACGATGATTCATTCTTGAGGAACCAAAATTACATATTTACCACGGAGGGTCACCCCCTTCCAATAAGGAGCACATGGCACGAGATAATCCCGACAACGCATGTTCCCAGCAACTGGACATTCGTTAAGGATGACAGCCAACCCTTCCGTGTGAGCGCATTGTCGTCTCAAGTTTGTCCAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCGTGGGAGAGTGCATGCCATGTACCAGACGTGTTACCTACCCACAGATGCAGGACCGATGATGACTGTGGAGTGGAGGCCGTATCATGCAGGAGAAGAACTTGCAGTATGGCTGGCTACTGCGGCTTGTGGCTGGGGGTTTATTAGCTTTTTTTTTTCTGTGGAGATTATACTGTTTCCCATTCTTTAAAGCACAAAAAAGTGAACGTTACTGGACGGCCTCGGCCTGTTACTTCTGTACATTAGAATATATATAGCTAATCGAACAGAATGATAGTAGCAAAGTCGTTGTCCCAGTTGTTAGCGCAGAATGAAACATGTATGCAAATTCTCCTAATGTA TCTTTGCTGATGTAATCTTTTGATTTATTATCAATCTTCCACTCCATAAATAATTAGGCAA]
[-] EMBL CB636429 [ ACCCCCTTCCAATAAGGAGCACATGGCACGAGATAATCCCGACAACGCATGTTCCCAGCAACTGGACATTCGTTAAGGATGACAGCCAACCTTTCCGTGTGAGCGCATTGTCGTCTCAAGTTTGTCCAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCGTGGGAGAGTGCATGCCATGTACCAGACGTGTTACCTACCCACAGATGCAGGACCGATGATGACTGTGGAGTGGAGGCCGTATCATGCAGGAGAAGAACTTGCAGTATGGCTGGCTACTGCGGCTTGTGGCTGGGGGTTTATTAGCTTTTTTTTTTCTGTGGAGATTATACTGTTTCCCATTCTTTAAAGCACAAAAAAGTGAACGTTACTGGACGGCAAAGGCCTGTTACTTCTGTACATTAGAATATATATAGCTAATCGAACAGAATGATAGTAGCAAAGTCGTTGTCCCAGTTGTTAGCGCAGAATGAAACATGTATGCAAATTCTCCTAATGTATTCTTGGCTGATGTAtc ]
consensusID : consensus_15343#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1389 fasta sequence
[TTTTTTTTTTTTTTTTTAAGGACCAGCANAACAGANTTTTTTTAGAGGACATCAATCATCTTATAACTCACGAAAATCGTGTCAACAGATAAACACAACGTGCTGCAACTATGCTGCAAAGGAAGTAATAAAAAACAGGTGATCCCACTCGCGCACGCGTATGTATGTCTATTCCCTATCAACACACGTCCACATCTAAAATCTTTGTCAACAAATGGAAACAAACACCTGAACGCGTCCATACAAGAACGCTGCTTATATATTACAGAAGAGCAAAAAAGATAATAATGGCTGGGTGCTTTCGGTGATTCC-AAATCCGCACGCTGTTCAGCCGTCA-GGGATGTACACTATGCGAATGCTAGATTGGCAACTCATGTTTCGTGTTTCCT-CCCACTCATATCATCTGGCTACAG-TTTTGCTCAAGGCATGTTTCATCAGAATGCGGAGCTCAGAGCACCACGTGCCGCCTCACGTTTCATCTCTGCGGCTTTTCCACTTCCACGGAAGTA-CATGTATACTTGCTGAATGACACCAATGCTCAGCAGT-GACTCAAGGCAGAATAATCCAAACCCGACAAAGTAAAATATCCCCACTATAGCACTCCTGCCTATGACATC-AATGGCAGGCAAAATCCCAGCCAAAGATTTTCCTTTGAAAGGAAAAGGAGGAGCCACAGCTGCCCACACACAGAAGATTATATGAATCAGGTAAAACAGAAAAAACCACCCAAACTTCAAAGCACTCTCAGTTCTCATTGCATTATAAAGAGGGCGGTACCATAACACATAAGCACCAGGTACACCAGATATGAAGTAGATAATAGCAAGCAACCAGATAATAACACCTTCCCCTTTTACCCATGCGGTTGTGGTTGCTATGATATTCCAAAATAGGCAGGCTGCCAATCCCAAAAACGATGAAAATGCAAGGTACTGCATTCTTTGTAGATGAATAGGTATCTCATTTGAAATATTATGGTGAATGAGAGGGAAAAAGGGTGGCCAATTTTTATCTTCAATGACAATGCCAGCTTGGGCTGCAGCCTCTTCCTTCCTTTTCAGTTCCCTTTCTCTTTTGTTTAGTTCAGCTTCCATTGCCTGGAGTTCTTTCTCCTTTTTCTTCAAATCCTTAGACGAGTCAAGAGGAATGTCCACATTGTAAAAATCAGCTGGCTCATGGGAGAGAGGTGGGAGTCGAGAATTGTTGGCAGGAGGAACACTTCCTCCCGCGAAGGGATTGACGTCGTCGTCCTCGAAGCCGTTGCGGCCGTGCTTCCCCGCCATGGCCGCCTGCCTACTCCGCCGACGGCGACGACGGCAACGACGATGGCGGCGAGTCGGCGACGGCGATGGAGGCGGTGGCCAACCGCTGCAGCAGCTGCTCCACTAG]
[-] EMBL AU184478 [TTTTTTTTTTTTTTTTTAAGGACCAGCANAACAGANAATTTTTAGAGGACATCAATCATCTTATAACTCACGAAAATCGTGTCAACAGATAAACACAACGTGCTGCAACTATGCTGCAAAGGAAGTAATAAAAAACAGGTGATCCCACTCGCGCACGCGTATGTATGTCTATTCCCTATCAACACACGTCCACATNTAAAATCTTTGTCAACAAATGGAAACAAACACCTGAACGCGTCCATACAANAACGCTGCTTATATATTACAGAAGAGCAAAAAAGATAATAATGGCTGGGNGCTTTCGGTGATTCC AAATCCGCACGCTGTTCAGCCGTCA GGGATGTACACTATGCGAATGCTAGATTGGCAACTCATGTTTCGNGTTTCCT CCCACTCATATCATCTGGCTACAG TTTTGCTCAAGGCATGTTTCATCANAATGCGGA ]
[-] EMBL AU101551 [ ttttTTTTTTTAGAGGACATCAATCATCTTATAACTCACGAAAATCGTGTCAACAGATAAACACAACGTGCTGCAACTATGCTGCAAAGGAAGTAATAAAAAACAGGTGATCCCACTCGCGCACG GTATGTATGTCTATTCCCTATCAACACACGTCCACATCTAAAATCTTTGTCAACAAATGGAAACAAACACCTGAACGCGTCCATACAAGAACGCTGCTTATATATTACAGAAGAGCAAAAAAGATAATAATGGCTGGGTGCTTTCGGTGATTCC AAATCCGCACGCTGTTCAGCCGTCAGGGGATGTACACTATGCGAATGCTAGATTGGCAACTCATGTTTCGTGTTTCCT CCCACTCAT ]
[-] EMBL AU184442 [ TTTTTTTAGAGGACATCAATCATCTTATAACTCACGAAAATCGTGTCAACAGATAAACACAACGTGCTGCAACTATGCTGCAAAGGAAGTAATAAAAAACAGGTGATCCCACTCGCGCACGCGTATGTATGTCTATTCCCTATCAACACACGTCCACATCTAAAATCTTTGTCAACAAATGGAAACAAACACCTGAACGCGTCCATACAAGAACGCTGCTTATATATTACAGAAGAGCAAAAAAGATAATAATGGCTGGGTGCTTTCGGTGATTCC AAATCCGCACGCTGTTCAGCCGTCA GGGATGTACACTATGCGAATGCTAGATTGGCAACTCATGTTTCGTGTTTCCT CCCACTCATATCATCTGGCTACAG TTTTGCTCAAGGCATGTTTCATCAGAATGCGGAGCTCAGAGCACCACGTGCCGCC ]
[+] EMBL CF327717 [ TTTTAGAGGACATCAATCATCTTATAACTCACGAAAATCGTGTCAACAGATAAACACAACGTGCTGCAACTATGCTGCAAAGGAAGTAATAAAAAACAGGTGATCCCACTCGCGCACGCGTATGTATGTCTATTCCCTATCAACACACGTCCACATCTAAAATCTTTGTCAACAAATGGAAACAAACACCTGAACGCGTCCATACAAGAACGCTGCTTATATATTACAGAAGAGCAAAAAAGATAATAATGGCTGGGTGCTTTCGGTGATTCC AAATCCGCACGCTGTTCAGCCGTCA GGGATGTACACTATGCGAATGCTAGATTGGCAACTCATGTTTCGTGTTTCCT CCCACTCATATCATCTGGCTACAG TTTTGCTCAAGGCATGTTTCATCAGAATGCGGAGCTCAGAGCACCACGTGCCGCCTCACGTTTCATCTCTGCGGCTTTTCCACTTCCACGGAAGTA CATGTATACTTGCTGAATGACACCAATGCTCAGCAGT GACTCAAGGCAGAATAATCCAAACCCGACAAAGTAAAATATCCCCACTATAGCACTCCTGCCTATGACATC AATGGCAGGC ]
[-] EMBL AK068335 [ AATCATCTTATAACTCACGAAAATCGTGTCAACAGATAAACACAACGTGCTGCAACTATGCTGCAAAGGAAGTAATAAAAAACAGGTGATCCCACTCGCGCACGCGTATGTATGTCTATTCCCTATCAACACACGTCCACATCTAAAATCTTTGTCAACAAATGGAAACAAACACCTGAACGCGTCCATACAAGAACGCTGCTTATATATTACAGAAGAGCAAAAAAGATAATAATGGCTGGGTGCTTTCGGTGATTCC AAATCCGCACGCTGTTCAGCCGTCA GGGATGTACACTATGCGAATGCTAGATTGGCAACTCATGTTTCGTGTTTCCT CCCACTCATATCATCTGGCTACAG TTTTGCTCAAGGCATGTTTCATCAGAATGCGGAGCTCAGAGCACCACGTGCCGCCTCACGTTTCATCTCTGCGGCTTTTCCACTTCCACGGAAGTA CATGTATACTTGCTGAATGACACCAATGCTCAGCAGT GACTCAAGGCAGAATAATCCAAACCCGACAAAGTAAAATATCCCCACTATAGCACTCCTGCCTATGACATC AATGGCAGGCAAAATCCCAGCCAAAGATTTTCCTTTGAAAGGAAAAGGAGGAGCCACAGCTGCCCACACACAGAAGATTATATGAATCAGGTAAAACAGAAAAAACCACCCAAACTTCAAAGCACTCTCAGTTCTCATTGCATTATAAAGAGGGCGGTACCATAACACATAAGCACCAGGTACACCAGATATGAAGTAGATAATAGCAAGCAACCAGATAATAACACCTTCCCCTTTTACCCATGCGGTTGTGGTTGCTATG ATTCCAAAATAGGCAGGCTGCCAATCCCAAAAACGATGAAAATGCAAGGTACTGCATTCTTTGTAGATGAATAGGTATCTCATTTGAAATATTATGGTGAATGAGAGGGAAAAAGGGTGGCCAATTTTTATCTTCAATGACAATGCCAGCTTGGGCTGCAGCCTCTTCCTTCCTTTTCAGTTCCCTTTCTCTTTTGTTTAGTTCAGCTTCCATTGCCTGGAGTTCTTTCTCCTTTTTCTTCAAATCCTTAGACGAGTCAAGAGGAATGTCCACATTGTAAAAATCAGCTGGCTCATGGGAGAGAGGTGGGAGTCGAGAATTGTTGGCAGGAGGAACACTTCCTCCCGCGAAGGGATTGACGTCGTCGTCCTCGAAGCCGTTGCGGCCGTGCTTCCCCGCCATGGCCGCCTGCCTACTCCGCCGACGGCGACGACGGCAACGACGATGGCGGCGAGTCGGCGACGGCGATGGAGGCGGTGGCCAACCGCTGCAGCAGCTGCTCCACTAG]
[-] EMBL AK104049 [ AATCATCTTATAACTCACGAAAATCGTGTCAACAGATAAACACAACGTGCTGCAACTATGCTGCAAAGGAAGTAATAAAAAACAGGTGATCCCACTCGCGCACGCGTATGTATGTCTATTCCCTATCAACACACGTCCACATCTAAAATCTTTGTCAACAAATGGAAACAAACACCTGAACGCGTCCATACAAGAACGCTGCTTATATATTACAGAAGAGCAAAAAAGATAATAATGGCTGGGTGCTTTCGGTGATTCC AAATCCGCACGCTGTTCAGCCGTCA GGGATGTACACTATGCGAATGCTAGATTGGCAACTCATGTTTCGTGTTTCCT CCCACTCATATCATCTGGCTACAG TTTTGCTCAAGGCATGTTTCATCAGAATGCGGAGCTCAGAGCACCACGTGCCGCCTCACGTTTCATCTCTGCGGCTTTTCCACTTCCACGGAAGTA CATGTATACTTGCTGAATGACACCAATGCTCAGCAGT GACTCAAGGCAGAATAATCCAAACCCGACAAAGTAAAATATCCCCACTATAGCACTCCTGCCTATGACATC AATGGCAGGCAAAATCCCAGCCAAAGATTTTCCTTTGAAAGGAAAAGGAGGAGCCACAGCTGCCCACACACAGAAGATTATATGAATCAGGTAAAACAGAAAAAACCACCCAAACTTCAAAGCACTCTCAGTTCTCATTGCATTATAAAGAGGGCGGTACCATAACACATAAGCACCAGGTACACCAGATATGAAGTAGATAATAGCAAGCAACCAGATAATAACACCTTCCCCTTTTACCCATGCGGTTGTGGTTGCTATGATATTCCAAAATAGGCAGGCTGCCAATCCCAAAAACGATGAAAATGCAAGGTACTGCATTCTTTGTAGATGAATAGGTATCTCATTTGAAATATTATGGTGAATGAGAGGGAAAAAGGGTGGCCAATTTTTATCTTCAATGACAATGCCAGCTTGGGCTGCAGCCTCTTCCTTCCTTTTCAGTTCCCTTTCTCTTTTGTTTAGTTCAGCTTCCATTGCCTGGAGTTCTTTCTCCTTTTTCTTCAAATCCTTAGACGAGTCAAGAGGAATGTCCACATTGTAAAAATCAGCTGGCTCATGGGAGAGAGGTGGGAGTCGAGAATTGTTGGCAGGAGGAACACTTCCTCCCGCGAAGGGATTGACGTCGTCGTCCTCGAAGCCGTTGCGGCCGTGCTTCCCCGCCATGGCCGCCTGCCTACTCCGCCGACGGCGACGACGGCAACGACGATGGCGGCGAGTCGGCGACGGCGATGGAGGCGGTGGCCAACCGCTGCAGCAGCTGCTCCA ]
[-] EMBL AA750057 [ ATTCCCTATCAACACACGTCCACATCT AAATCTTTGTCAACAAATGGAAACAAACACCTGAACGCGTCCATACAAGAACGCTGCTTATATATTACAGAAGAGCAAAAAAGATAATAATGGCTGGGAGCTTTCGGTGATTCC AAAT CGCACGCTGTTCAGCCGTCA GGGATGTACACTATGCGAATGCTA ]
[-] EMBL AA751353 [ CACGTCCACATCT AATCTTTGTCAACAAATGGAAACAAACACCTGAACGCGTCAATACAAGAACGCTGC TATATATTACAGAAGAGCAAAAAAGATAATAATGGCTGGGTGCTTTCGGTGATTCC AAATCCGCACGCTGTTCAGCCGTCA GGGATGTACACTATGCGAAT ]
[-] EMBL AU065315 [ nTGGCTGGGTGCTTTCGGTGATTCCAAAATCCGCACGCTGTTCAGCCGTCA GGNATGTACACTATGCGAATGCTAGATTGGCAACTCATGTTTCGTGTTTCCTCCCCACTCATATCATCTGGCTACAGTTTTTGCTCAAGGCATGTTTCATCAGAATGCGGAGCTCAGAGCACCACGTGCCGCCTCACGTTTCATCTCTGCGGCTTTTCCACTTCCACGGAAGTACCATGTATACTTGCTGAATGACACCAATGCTCAGCAGT GACTCAAGGCAGAATAATCCAAACCCGACAAAGTAAAATATCCCCACTATAGCACTCCTGCCTATGACATC AATGGCAGGCAAAATCCCAGCCAAAGATTTTCCTTTGAAAGGAAAAGGAGGAGCCACAGCTGCCCACACACAGAAGATTATATGAATCAGGTAAAACAGAAAAAACCACCCAAACTTCAAAGCACTCTCAGTTCTCATTGCATTATAAAGAGGGCGGTACCATAACACATAAGCACCAGGTACACCAGATATGAAGTAGATAATAGCAAGCAACCAGATAATAACACCTTCCCCTTTTACCCATGCGGTTGTGGTTGCTATGATATTCCA ]
[-] EMBL OSR23281A [ TTCGACTTCGGCGGAAGTA CATGTATACTTGCTGAATGACACCAATGCNCAGCAGTGGNCTCAAGGCAGAATAATCCAAACCCGACAAAGTNAAATATCCCCACTATAGCACTCCTGCCTATGACATC AATGGCAGGCAAAATCCCAGCCAAAGATTTTCCTTTGAAAGGAAAAGGAGGAGCCACAGCTGCCCACACACAGAAGATTATATGAATCAGGTAAAACAGAAAAAACCACCCAAACTTCAAAGNACTCTCAGNTCTCATTGCATTATAAAGAGGGCGGTACCATAACACATAAGCACCAGGTACACCAGATATGAAGTAGATAATAGCAAGCAACCAGATAATAACACCTTCCC ]
[-] EMBL CF327716 [ TTCCACGGAAGTA CATGTATACTTGCTGAATGACACCAATGCTCAGCAGT GACTCAAGGCAGAATAATCCAAACCCGACAAAGTAAAATATCCCCACTATAGCACTCCTGCCTATGACATC AATGGCAGGCAAAATCCCAGCCAAAGATTTTCCTTTGAAAGGAAAAGGAGGAGCCACAGCTGCCCACACACAGAAGATTATATGAATCAGGTAAAACAGAAAAAACCACCCAAACTTCAAAGCACTCTCAGTTCTCATTGCATTATAAAGAGGGCGGTACCATAACACATAAGCACCAGGTACACCAGATATGAAGTAGATAATAGCAAGCAACCAGATAATAACACCTTCCCCTTTTACCCATGCGGTTGTGGTTGCTATGATATTCCAAAATAGGCAGGCTGCCAATCCCAAAAACGATGAAAATGCAAGGTACTGCATTCTTTGTAGATGAATAGGTATCTCATTTGAAATATTATGGTGAATGAGAGGGAGAAAGGGTGGCCAATTTTTATCTTCAATGACAATGCCAGCTTGGGCTGCAGCCTCTTCCTTCCTTTTCAGTT ]
[-] EMBL OSR23631A [ ATAGCACTCCTGCCTATGACATCAAATGGCAGNCAAAATCCCAGCCAAAGATTTTCCTTTGAAAGGAAAAGGAGGAGCCACAGCTGCCCACACACAGAAGATTATATGAATCAGGTAAAACAGAAAAAACCACCCAAACTTCAAAGNACTCTCAGTTCTCATTGCATTATAAAGAGGGCGGTACCATAACACATAAGCACCAGGTACACCAGATATGAAGTAGATAATAGCAAGCAACCAGATAATAACACCTTCCC ]
[-] EMBL AU184477 [ TAGATGAATAGGTATCTCATTTGAAATATTATGGTGAATGAGAGGGAAAAAGGGTGGCCAATTTTTATCTTCAATGACAATGCCAGCTTGGGCTGCAGCCTCTTCCTTCCTTTTCAGTTCCCTTTCTCTTTTGTTTAGTTCAGCTTCCATTGCCTGGAGTTCTTTCTCCTTTTTCTTCAAATCCTTAGACGAGTCAAGAGGAATGTCCACATTGTAAAAATCAGCTGGCTCATGGGAGAGAGGTGGGAGTCGAGAATTGTTGGCAGGAGGAACACTTCCTCCCGCGAAGGGATTGACGTCGTCGTCCTCGAAGCCGTTGCGGCCGTGCTTCCCCGCCATGGCCGCCTGCCTACTCCGCCGACGGCGACGACGGCAACGACGATGGCGGCGAGTCGGCGACGGCGATGGAGGCGGTGGCCAACCGCTGCAGCAG ]
consensusID : consensus_15343#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1045 fasta sequence
[TGTCCAAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCAGTGGGAGAGTGCATGCCATGTACCANGACGTGTTACACTACACCACAGATGCAGGACCGATGATGACATGTGGAGTGGAGGCAAGTATCATGCAGGAGAAGAACTTGCAAGTGATGGCTGGCTGACTGCGGCTTTGTGGCTGGGGGTTTATTAGCTGTGTGTTTGTTTTGTCTGTAGAGATTATACTGTGTTCCCATTCGTGTTAAAGCAACAAAAAAAGTGAACAGTTACTGGACAGGCCTCAGGCCTGTTGACTTCTGTACATTAGAATATATATAGCTAATCGAACAAGAATGATAGTA-CAAA-TC-TTGTCCCNGTTGTTAGC-CAGAATGAAACATGTATCCAAATTCTCCTAATGTATTCTTTGCTAAAAAAAACTTTTGATTTATTATCAAAAAAGGATTTTGCCTGCCATTGATGTCATAGGCAAGAGTGCTATAGTGGGGATATTTTACTTTGTCGGGTTTGGATTATTCTGCCTTGAGTCACTGCTGAGCATTGGTGTCATTCAGCAAGTATACATGTACTTCCGTGGAAGTGGAAAAGCCGCAGAGATGAAACGTGAGGCGGCACGTGGTGCTCTGAGCTCCGCATTCTGATGAAACATGCCTTGAGCAAAACTGTAGCCAGATGATATGAGTGGGAGGAAACACGAAACATGAGTTGCCAATCTAGCGTTCGCATAGTGTACATCCCTGACGGCTGAACAGCGTGCGGATTTGGAATCACCAAAGCACCCAGCCATTATTATCTTTTTTGCTCTTCTGTAATATATAAGCAGCGTTCTTGTATGGACGCGTTCAGGTGTTTGTTTCCATTTGTTGACAAAGATTTTAGATGTGGACGTGTGTTGATAGGGAATAGACATACATACGCGTGCGCGAGTGGGATCACCTGTTTTTTATTACTTCCTTTGCAGCATAGTTGCAGCACGTTGTGTTTATCTGTTGACACGATTTTCGTGAGTTATAAGATGATTGATGTCCTCTAAAAAAAAAAAAAAAA]
[+] EMBL BM421406 [TGTCCAAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCAGTGGGAGAGTGCATGCCATGTACCANGACGTGTTACACTACACCACAGATGCAGGACCGATGATGACATGTGGAGTGGAGGCAAGTATCATGCAGGAGAAGAACTTGCAAGTGATGGCTGGCTGACTGCGGCTTTGTGGCTGGGGGTTTATTAGCTGTGTGTTTGTTTTGTCTGTAGAGATTATACTGTGTTCCCATTCGTGTTAAAGCAACAAAAAAAGTGAACAGTTACTGGACAGGCCTCAGGCCTGTTGACTTCTGTACATTAGAATATATATAGCTAATCGAACAAGAATGATAGTA CAAA TC TTGTCCCNGTTGTTAGC CAGAATGAAACATGTATCCAAATTCTCCTAATGTATTCTTTGCTAAAAAAAA ]
[-] EMBL CB635422 [ ATATATATAGCTAATCGAAC AGAATGATAGTAGCAAAGTCGTTGTCCCAGTTGTTAGCGCAGAATGAAACATGTATGCAAATTCTCCTAATGTATTCTTTGCTGATGTAATCTTTTGATTTATTATCAAAAAAGGATTTTGCCTGCCATTGATGTCATAGGCAAGAGTGCTATAGTGGGGATATTTTACTTTGTCGGGTTTGGATTATTCTGCCTTGAGTCACTGCTGAGCATTGGTGTCATTCAGCAAGTATACATGTACTTCCGTGGAAGTGGAAAAGCCGCAGAGATGAAACGTGAGGCGGCACGTGGTGCTCTGAGCTCCGCATTCTGATGAAACATGCCTTGAGCAAAACTGTAGCCAGATGATATGAGTGGGAGGAAACACGAAACATGAGTTGCCAATCTAGCGTTCGCATAGTGTACATCCCTGACGGCTGAACAGCGTGCGGATTTGGAATCACCAAAGCACCCAGCCATTATTATCTTTTTTGCTCTTCTGTAATATATAAGCAGCGTTCTTGTATGGACGCGTTCAGGTGTTTGTTTCCATTTGTTGACAAAGATTTTAGATGTGGACGTGTGTTGATAGGGAATAGACATACATACGCGTGCGCGAGTGGGATCACCTGTTTTTTATTACTTCCTTTGCAGCATAGTTGCAGCACGTTGTGTTTATCTGTTGACACGATTTTCGTGAGTTATAAGATGATTGATGTCCTCTAAAAAAAAAAAAAAAA]
[-] EMBL CA759905 [ agaGGACGAGACAAGGGGTTTGTTTCCATTTGTTGACAAAGATTTTAGATGTGGACGTGTGTTGATAGGGAATAGACATACATACGCGTGCGCGAGTGGGATCACCTGTTTTTTATTACTTCCTTTGCAGAATAGTTGCAGCACGTTGTGTTTATCTGTTGACACGATTTTCGTGAGTTATAAGATGATTGATGTCCTCTAAAAAAAAAAAAAAA ]
consensusID : consensus_15343#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 773 fasta sequence
[GCTCTCCCCGGGGGAGCCGCGGCGGGCGCCGCCATCGCCGGCGATGGGTACGGGCGCGGCAGGAGGCTGTACATGAGGAACAAGGTCCTGGAGATGTTTTACCATGCTTATGACAACTATATGACTTATGCATTTCCACATGATGAATTGAAGCCTCTAACCAAAAGTTTCACTGACTCCCTTAGTGAGCTTGGCAACCTAAATGTATTAAAGTATCAACAAGTTTGCAAATTTTAATTGAAATTTTAAAAGCTTTGAGATAGCAGGTCATGATGTCATCACTTTGTTCCAACTTGTAGCTTGAACATTTGCCAAATGATTACAATGGATCTGCACTTACACTAGTCGAATCGTTGTCAAGTCTTGTTGTCTTAGGTAACCTCACGGAGTTTGAAAGAGGAGTTCTCTGGCTTTCAGAGAACCTAACATTTGATGTTGATGCTCGAATAAATCTTTTTGAGTGCAACATAAGACTTCTTGGGGGGCTTATTTCTGGTCATATTCTTGCAAAGGAGCACAGCAGTCATCTTAAAGATGGACCATATCAGGACCAGTTACTACATCTTGCTGAAAATTTAGGAAGTCGTTTTCTACCAGCTTTTGAGACACCTACTGGATTGCCATACGCATGGATCAATCTTAAGTATGGAGTGATGGAAAATGAAACAACTGAGACAAGCACATCAGGGTGTGGTTCTCTGATTCTTGAAATGGGTGCATTATCACGTTTGACGGGTGATTCTAGATATGAGGCTGCAGCTCTTCGTGCTCTT]
[+] EMBL CB635421 [GCTCTCCCCGGGGGAGCCGCGGCGGGCGCCGCCATCGCCGGCGATGGGTACGGGCGCGGCAGGAGGCTGTACATGAGGAACAAGGTCCTGGAGATGTTTTACCATGCTTATGACAACTATATGACTTATGCATTTCCACATGATGAATTGAAGCCTCTAACCAAAAGTTTCACTGACTCCCTTAGTGAGCTTGGCAACCTAAATGTATTAAAGTATCAACAAGTTTGCAAATTTTAATTGAAATTTTAAAAGCTTTGAGATAGCAGGTCATGATGTCATCACTTTGTTCCAACTTGTAGCTTGAACATTTGCCAAATGATTACAATGGATCTGCACTTACACTAGTCGAATCGTTGTCAAGTCTTGTTGTCTTAGGTAACCTCACGGAGTTTGAAAGAGGAGTTCTCTGGCTTTCAGAGAACCTAACATTTGATGTTGATGCTCGAATAAATCTTTTTGAGTGCAACATAAGACTTCTTGGGGGGCTTATTTCTGGTCATATTCTTGCAAAGGAGCACAGCAGTCATCTTAAAGATGGACCATATCAGGACCAGTTACTACATCTTGCTGAAAATTTAGGAAGTCGTTTTCTACCAGCTTTTGAGACACCTACTGGATTGCCATACGCATGGATCAATCTTAAGTATGGAGTGATGGAAAATGAAACAACTGAGACAAGCACATCAGGGTGTGGTTCTCTGATTCTTGAAATGGGTGCATTATCACGTTTGACGGGTGATTCTAGATATGAGGCTGCAGCTCTTCGTGCTCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15343#0 GAAAACCCCATGCGACCTCCTCCCCGGCCGCGCCGCCCAGTGCCGGCGCGGCTCGTCGCC 60
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------TGTCCAAGAAACGATTTTCCGGCAAAGCGTTGGCTC 36
consensus_15343#1 --------------------TTTTTTTTTTTTTTTTTAAGGACCAGCANAACAGANTTTT 40
consensus_15343#0 GCTGCGGTCCTCCTCTCGGCTCTCGCCGGGGGAGCCGCGGCGGGCGCCGCCATCGCCGG- 119
consensus_15343#3 ------------------GCTCTCCCCGGGGGAGCCGCGGCGGGCGCCGCCATCGCCGG- 41
consensus_15343#2 CCCAGTGGGAGAGTGCATGCCATGTACCANGACGTGTTACACTACACCACAGATGCAGGA 96
consensus_15343#1 TTTAGAGGACATCAATCATCTTATAACTCACGAAAATCGTGTCAACAGATAAACACAA-- 98
* * *
consensus_15343#0 -CGATGGGTACGGGCGCGGCAGGAGGCTGTA-CATGAGGAACAAGGTCCTGGAGATGTTT 177
consensus_15343#3 -CGATGGGTACGGGCGCGGCAGGAGGCTGTA-CATGAGGAACAAGGTCCTGGAGATGTTT 99
consensus_15343#2 CCGATGATGACATGTGGAGTGGAGGCAAGTATCATGCAGGAGAAGAACTTGCAAGTGA-- 154
consensus_15343#1 -CGTGCTGCAACTATGCTGCA-AAGGAAGTA--ATAAAAAACAGGTGATCCCACTCGCGC 154
** * * * * *** ** * * * * *
consensus_15343#0 TACCATGCTTATGACAACTATATGACTTATGCATTTCCACATGATGAATTGAAGCCTCTA 237
consensus_15343#3 TACCATGCTTATGACAACTATATGACTTATGCATTTCCACATGATGAATTGAAGCCTCTA 159
consensus_15343#2 TGGCTGGCTGACTGCGGCTTTGTGGCTGGGGGTTTATTAGCTGTGTGTTTGTTTTGTCTG 214
consensus_15343#1 ACGCGTATGTATGTCTATTCCCT-ATCAACACACGTCCACAT------CTAAAATCTTTG 207
* * * * * * * * * *
consensus_15343#0 ACCAAAAGTTTCACTGACTCCCTTAGTGAGCTTG-GCAACCTAAAT-------------- 282
consensus_15343#3 ACCAAAAGTTTCACTGACTCCCTTAGTGAGCTTG-GCAACCTAAATGTATTAAAGTATCA 218
consensus_15343#2 --TAGAGATTATACTGTGTTCCCATTCGTGTTAAAGCAACAAAAAAAGTGAACAGTTACT 272
consensus_15343#1 TCAACAAATGGAAACAAACACCTGAACGCGTCCATACAAGAACGCTGCTTATATATTACA 267
* * * * ** * * ***
consensus_15343#0 ------------------------------------------------------------
consensus_15343#3 ACAAGTTTGCAAATTTTAATTGAAATTTTAAAAGCTTTGAGATAGCAGGTCATGATGTCA 278
consensus_15343#2 GGACAGGCCTCAGGCCTGTT------------GACTTCTGTACATTAGAATAT-ATATAG 319
consensus_15343#1 G----------------------------------------------------------- 268
consensus_15343#0 ---------------------CTTGAACATTTGCCAAATGATTACAATGGATCTGCACTT 321
consensus_15343#3 TCACTTTGTTCCAACTTGTAGCTTGAACATTTGCCAAATGATTACAATGGATCTGCACTT 338
consensus_15343#2 CTAATCGAACAAGAATGATAGTACAAATCTTGTCCCNGTTGTTA-GCCAGAATGAAACAT 378
consensus_15343#1 ----------AAGAGCAAAAAAGATAATAATGGCTGGGTGCTTTCGGTGATTCCAAATCC 318
** * * * ** *
consensus_15343#0 ACACTAGTCGAATCGTTGTCAAGTCTTGTTGTCTTAGGTAACCTCACGGAGT----TTGA 377
consensus_15343#3 ACACTAGTCGAATCGTTGTCAAGTCTTGTTGTCTTAGGTAACCTCACGGAGT----TTGA 394
consensus_15343#2 GTATC---CAAATTCTCCTAATGTATTCTTTGCTAAAAAAAACTTTTGATTTATTATCAA 435
consensus_15343#1 GCACG--CTGTTCAGCCGTCAGGGAT-GTACACTATGCGAATGCTAGATTGGCAACTCAT 375
* * * * * * ** ** *
consensus_15343#0 AAGAGGAGTTCTCTGGCTTTCAGAGAACCTAACATTTGATGTTGATGCTCGAATAA---A 434
consensus_15343#3 AAGAGGAGTTCTCTGGCTTTCAGAGAACCTAACATTTGATGTTGATGCTCGAATAA---A 451
consensus_15343#2 AAAAGGATTTTGCCTGCCATT-GATGTCATAGGCAAGAGTGCTATAGTGGGGATATTTTA 494
consensus_15343#1 GTTTCGTGTTTCCTCCCACTCATATCATCTGGC-TACAGTTTTGCTCAAGGCATGTTTCA 434
* ** * * * * * * * * ** *
consensus_15343#0 TCT---TTTTGAGTGCAACATAAGACTTCTTGGGGGGCTTATTTCTGGTCATATTCTTGC 491
consensus_15343#3 TCT---TTTTGAGTGCAACATAAGACTTCTTGGGGGGCTTATTTCTGGTCATATTCTTGC 508
consensus_15343#2 CTT---TGTCGGGTTTGGATTATTCTGCCTTGAGTCACTGCTGAGCATTGGTGTCATTCA 551
consensus_15343#1 TCAGAATGCGGAGCTCAGAGCACCACGTGCCGCCTCACGTTTCATCTCTGCGGCTTTTCC 494
* * * * * * * * **
consensus_15343#0 AAAGGAGCACAGCAGTCATCTTAAAGATGGACCATATCAGGACCAGTTACTACATCTTGC 551
consensus_15343#3 AAAGGAGCACAGCAGTCATCTTAAAGATGGACCATATCAGGACCAGTTACTACATCTTGC 568
consensus_15343#2 GCAAGTATACATGTACTTCCGTGGAAGTGGA--AAAGCCG---CAGAGATGAAACGTGAG 606
consensus_15343#1 ACT--TCCACGGAAGTACATGTATACTTGCTGAATGACAC---CAATGCTCAGCAGTGAC 549
** * * ** * * ** * *
consensus_15343#0 TGAAAATTTAGGAAGTCGTTTTCTACCAGCTTTTGAGACACCTACTGGATTGCCATACGC 611
consensus_15343#3 TGAAAATTTAGGAAGTCGTTTTCTACCAGCTTTTGAGACACCTACTGGATTGCCATACGC 628
consensus_15343#2 GCGGCACGTGGTGCTCTGAGCTCCGCATTCTGATGAAACATGCCTTGAGCAAAACTGTAG 666
consensus_15343#1 TCAAGGCAGAATAATCCAAACCCGACAAAGTAAAATATCCCCACTATAGCACTCCTGCCT 609
* * * * *
consensus_15343#0 ATGG-ATCAATCTTAAGTATGGAGTGATGGAAAATGAAACAACTGAGACAAGCACAT-CA 669
consensus_15343#3 ATGG-ATCAATCTTAAGTATGGAGTGATGGAAAATGAAACAACTGAGACAAGCACAT-CA 686
consensus_15343#2 CCAG-ATGA--TATGAGTGGGAGGAAACACGAAACATGAGTTGCCAATCTAGCGTTCGCA 723
consensus_15343#1 ATGACATCAATGGCAGGCAAAATCCCAGCCAAAGATTTTCCTTTGAAAGGAAAAGGA-GG 668
** * * * ** * *
consensus_15343#0 GGGTGTGGTTCTCTGATTCTTGAAATGGGTGCATTATCACGTTTGACGGGTGATTCTAGA 729
consensus_15343#3 GGGTGTGGTTCTCTGATTCTTGAAATGGGTGCATTATCACGTTTGACGGGTGATTCTAGA 746
consensus_15343#2 TAGTGTACATCCCTGACGGCTGAACAGCGTGCGG-ATTTGGAATCACCAAAGCACCCAGC 782
consensus_15343#1 AGCCACAGCTGCCCACACACAGAAGATTATATGA-ATCAGGTAAAACAGAAAAAACCACC 727
* * *** * ** * ** * *
consensus_15343#0 TATGAGGCTGCAGCTCTTCGTGCTCTTCGTAAGTTGTGGAGCATGAGAAGTTCACTAAAT 789
consensus_15343#3 TATGAGGCTGCAGCTCTTCGTGCTCTT--------------------------------- 773
consensus_15343#2 CAT-----TATTATCTTTTTTGCTCTTCTGTAATATATAAGCAGCGTTCTTGTATGGACG 837
consensus_15343#1 CAA-ACTTCAAAGCACTCTCAGTTCTCATTGCATTATAAAG----AGGGCGGTACCATAA 782
* * * ***
consensus_15343#0 CTTGTAGGCACAACCCTTGATGTCTTGACTGGCAAGTGGATTGAATATTCGTCAGGCATT 849
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 CGTTCAGGTGTTTGTTTCCATTTGTTGACAAAGATTTTAGATGTGGACGTGTGTTG-ATA 896
consensus_15343#1 CACATAAGCACCAGGTAC---------ACCAG-ATATGAAGTAGATAATAGCAAGCAACC 832
consensus_15343#0 GGTGCTGGAGTTGATTCATTTTATGAGTATTTGATTAAAGCGTATGTTCTTTTCGGAAGC 909
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 GGGAATAGACATACATACGCGTGCGCGAGTGGGATCACCTGTTTTTTATTACTTCCTTTG 956
consensus_15343#1 AG-ATAATAACACCTTCCCCTTTTACCCATGCGGTTGTGGTTGCTATGATATTCCAAAAT 891
consensus_15343#0 GAAGAATACTGGGATATGTTTCATTCAGCTTACCTTGCAGTGCAGAAGTATTTCCGACAT 969
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 CAGCATAGTTGCAGCACGTTGTGTTTATCTGTTGACACGATTTTCGTG-AGTTATAAGAT 1015
consensus_15343#1 AGGCAG-GCTGCCAATCCCAAAAACGATGAAAATGCAAGGTACTGCATTCTTTGTAGATG 950
consensus_15343#0 GGCCCATGGTATCATGAGGCTGATATGAGGACCGGAGAAGCAACACACTGGCAACTAACT 1029
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 GATTGATGTCCTCTAAAAAAAAAAAAAAAA------------------------------ 1045
consensus_15343#1 AATAGGTATCTCATTTGAAATATTATGGTGAATGAGAGGGAAAAAGGGTGGCCAATTTTT 1010
consensus_15343#0 AGCCTTCAAGCC--TTCTGGCCAGGTCTTCAGACACTTCTAGGAGATGTTGCTGCTGCAA 1087
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ATCTTCAATGACAATGCCAGCTTGGGCTGCAGCCTCTTCCTTCCT-TTTCAGTTCCCTTT 1069
consensus_15343#0 ATATATCACATCGTGAATTTTACAATGTATGGCAAAGGTTTGGTGTTCTGCCGGAAAGAT 1147
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 CTCTTTTGTTTAGTTCAGCTTCCATTGCCTGG-AGTTCTTTCTCCTTTTTCTTCAAATCC 1128
consensus_15343#0 ATCTTTTGGACTTCGGAATGTTGCATCCTACAGAGAAGTATTATCCTTTACGTCCAGAGT 1207
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 TTAGACGAGTCAAGAGGAATGTCCACATTGTAAAAATCAGCTGGCTCATGGG---AGAGA 1185
consensus_15343#0 TTGCTGAGTCTACATTTTATCTTTATCAAGCAACTAAAGATCCTTGGTATCTAGAAGTTG 1267
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 GGTGGGAGTCGAGA----ATTGTTGGCAGG--AGGAACACTTCCTCCCGCGAAGGGATTG 1239
consensus_15343#0 GTGAAGCTATCATTGGATCCCTTAATTACTATACTAAAGTGGATGGAGGTTTTGCTAGTG 1327
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ACGTCGTCGTCCTCGAAGCCGTTGCGGCCGTGCTTCCCCGCCATGGCCGCCTGCCTACTC 1299
consensus_15343#0 TCAGGGATGTTTCGACAATGAAACTTGAAGATCATCAACATAGCTTCTTTCTTTCAGAAA 1387
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 CGCCGACGGCGACGACG--GCAACGACGATGGCGGCGAGTCGGCGACGGCGATGGAGGCG 1357
consensus_15343#0 CCTGCAAATATCTTTTTCTTCTCTACGATGATTCATTCTTGAGGAACCAAAATTACATAT 1447
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 GTGGCCAACCGCTGCAGCAGCTGCTCCACTAG---------------------------- 1389
consensus_15343#0 TTACCACGGAGGGTCACCCCCTTCCAATAAGGAGCACATGGCACGAGATAATCCCGACAA 1507
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ------------------------------------------------------------
consensus_15343#0 CGCATGTTCCCAGCAACTGGACATTCGTTAAGGATGACAGCCAACCCTTCCGTGTGAGCG 1567
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ------------------------------------------------------------
consensus_15343#0 CATTGTCGTCTCAAGTTTGTCCAGAAACGATTTTCCGGCAAAGCGTTGGCTCCCCGTGGG 1627
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ------------------------------------------------------------
consensus_15343#0 AGAGTGCATGCCATGTACCAGACGTGTTACCTACCCACAGATGCAGGACCGATGATGACT 1687
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ------------------------------------------------------------
consensus_15343#0 GTGGAGTGGAGGCCGTATCATGCAGGAGAAGAACTTGCAGTATGGCTGGCTACTGCGGCT 1747
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ------------------------------------------------------------
consensus_15343#0 TGTGGCTGGGGGTTTATTAGCTTTTTTTTTTCTGTGGAGATTATACTGTTTCCCATTCTT 1807
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ------------------------------------------------------------
consensus_15343#0 TAAAGCACAAAAAAGTGAACGTTACTGGACGGCCTCGGCCTGTTACTTCTGTACATTAGA 1867
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ------------------------------------------------------------
consensus_15343#0 ATATATATAGCTAATCGAACAGAATGATAGTAGCAAAGTCGTTGTCCCAGTTGTTAGCGC 1927
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ------------------------------------------------------------
consensus_15343#0 AGAATGAAACATGTATGCAAATTCTCCTAATGTATTCTTTGCTGATGTAATCTTTTGATT 1987
consensus_15343#3 ------------------------------------------------------------
consensus_15343#2 ------------------------------------------------------------
consensus_15343#1 ------------------------------------------------------------
consensus_15343#0 TATTATCAATCTTCCACTCCATAAATAATTAGGCAA 2023
consensus_15343#3 ------------------------------------
consensus_15343#2 ------------------------------------
consensus_15343#1 ------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||