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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15346#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1395 fasta sequence
[CGCGCGCGCGCAGGTTCAGATAGTTTCAGGCTTGGGAGGAAGGAAGGAGAGGCAGAGAGAGAATTTTTGTCTGAGAGAATTCAGATTTCAGAGAGATAATTTTCGTCTGAAGAATTGTGTATCGATCGATGTCTGGTGGTGTGATCAGCATGGTGGTCGCGCCATGGATTCTCGCTTGCGGGTTCTTGCTCTGCTCATCCTCCTTCCTCGGAGCTGAAGGCGCCATTGGTGTGAACTACGGCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGAACATCAACTAC-GTCC-GCCTCTTCCACCCGGACACCG-CCGTCCTCGCCGCGCTCCGCAACTCCGGCATCGGCGTCGTCCTCGGCACGTACAACGAGGACCTCGCCCGCCTCGCCTCCGACCCCTCGTTTGCCGCCTCCTGGGTCAGCTCCTACGTCCAGCCCTTCGCCGGCGCCGTCAGCTTCCGCTACATCAACGCCGGCAACGAGGTCAT-CCCCGGCGACCCCGCC-GC-CAACGTCCTCCCGGCCATGCGCAACCTCGACGCCGCGCTCAAGGCCGCCGGGATCAGCGGCATCCCGGTCACCACCGCCGTCGCCACGTCCGTGCTCGGCGTCTCGTA-CCCGCCGTCGCAGGGCGCGTTCTCGGAGGCGGCGTCGCCGTACATGGCGCCGATCGTCGCCTACCTCGCGTCCAGGGGCGCGCCGCTGCTGGTGAACGTGTACCCCTACTTCGCGTACGCCGCGGACGCGG-AGCGCGTGCAGCTCGGGTACGCGCTGCTGTCGGCGTCGCAGTCGGCGTCGGTGACCGACGGCGGCGTGACATACACCAACATGTTCGACGCGATCGTGGACGCGGCGCACGCGG-CGGTGGAGAAGGCGACGGGCGGGCAGGCGGTGGAGCTGGTGGTGTCGGAGACCGGCTGGCCGTCCGGTGGCGGCGGCGTGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACCTGATCCGCCACGTCT-CCGGCGGCGCCGGGACGCCGCGGCGGCCGGGGAAGCCGGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCCATTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCATTTGTTGTCGATGCA--CATTGGAGTATGATTTATTCAAACGCACGAATTTTACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK069244 [CGCGCGCGCGCAGGTTCAGATAGTTTCAGGCTTGGGAGGAAGGAAGGAGAGGCAGAGAGAGAATTTTTGTCTGAGAGAATTCAGATTTCAGAGAGATAATTTTCGTCTGAAGAATTGTGTATCGATCGATGTCTGGTGGTGTGATCAGCATGGTGGTCGCGCCATGGATTCTCGCTTGCGGGTTCTTGCTCTGCTCATCCTCCTTCCTCGGAGCTGAAGGCGCCATTGGTGTGAACTACGGCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGAACATCAACTAC GTCC GCCTCTTCCACCCGGACACCG CCGTCCTCGCCGCGCTCCGCAACTCCGGCATCGGCGTCGTCCTCGGCACGTACAACGAGGACCTCGCCCGCCTCGCCTCCGACCCCTCGTTTGCCGCCTCCTGGGTCAGCTCCTACGTCCAGCCCTTCGCCGGCGCCGTCAGCTTCCGCTACATCAACGCCGGCAACGAGGTCAT CCCCGGCGACCCCGCC GC CAACGTCCTCCCGGCCATGCGCAACCTCGACGCCGCGCTCAAGGCCGCCGGGATCAGCGGCATCCCGGTCACCACCGCCGTCGCCACGTCCGTGCTCGGCGTCTCGTA CCCGCCGTCGCAGGGCGCGTTCTCGGAGGCGGCGTCGCCGTACATGGCGCCGATCGTCGCCTACCTCGCGTCCAGGGGCGCGCCGCTGCTGGTGAACGTGTACCCCTACTTCGCGTACGCCGCGGACGCGG AGCGCGTGCAGCTCGGGTACGCGCTGCTGTCGGCGTCGCAGTCGGCGTCGGTGACCGACGGCGGCGTGACATACACCAACATGTTCGACGCGATCGTGGACGCGGCGCACGCGG CGGTGGAGAAGGCGACGGGCGGGCAGGCGGTGGAGCTGGTGGTGTCGGAGACCGGCTGGCCGTCCGGTGGCGGCGGCGTGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACCTGATCCGCCACGTCT CCGGCGGCGCCGGGACGCCGCGGCGGCCGGGGAAGCCGGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCCATTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCATTTGTTGTCGATGCA CATTGGAGTA ]
[+] EMBL AU032427 [ GCGCGCGCAGGTTCAGATAGTTTCAGGCTTGGGAGGAAGGAAGGAGAGGCAGAGAGAGAATTTTTGTCTGAGAGAATTCAGATTTCAGAGAGATAATTTTCGTCTGAAGAATTGTGTATCGATCGATGTCTGGTGGTGTGATCAGCATGGTGGTCGCGCCATGGATTCTCGCTTGCGGGTTCTTGCTCTGCTCATCCTCCTTCCTCGGAGCTGAAGGCGCCATTGGTGTGAACTACGGCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGAACATCAACTAC GTCC ]
[+] EMBL OSS14937A [ CGCGCAGGTTCAGATAGTTTCAGGCTTGGGAGGAAGGAAGGAGAGGCAGAGAGAGAATTTTTGTCTGAGAGAATTCAGATTTCAGAGAGATAATTTTCGTCTGAAGAATTGTGTATCGATCGATGTCTGGTGGTGTGATCAGCATGGTGGTCGCGCCATGGATTCTCGCTTGCGGGTTCTTGCTCTGCTCATCCTCCTTCCTCGGAGCTGAAGGCGCCATTGGTGTGAACTACGGCATGCTGGGGAACAACCTGCCGTCGNCGGCGCAGGTGATCTCCATGTACAAGGNCAAGAACATCAACTAC GTCC GGCTCTTCCACCCGGACAac ]
[+] EMBL AU032423 [ GCGCAGGTTCAGATAGTTTCAGGCTTGGGAGGAAGGAAGGAGAGGCAGAGAGAGAATTTTTGTCTGAGAGAATTCAGATTTCAGAGAGATAATTTTCGTCTGAAGAATTGTGTATCGATCGATGTCTGGTGGTGTGATCAGCATGGTGGTCGCGCCATGGATTCTCGCTTGCGGGTTCTTGCTCTGCTCATCCTCCTTCCTCGGAGCTGAAGGCGCCATTGGTGTGAACTACGGCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTNCATGTACAAGGCCAAGAACATCAACTAC GTCC GCCTCTTTCAC ]
[+] EMBL CB647944 [ GCGCACCCCCTGATAGTTTCAGGCTTGGGAGGAAGGAAGGAGAGGCAGAGAGAGAATTTTTGTCTGAGAGAATTCAGATTTCAGAGAGATAATTTTCGTCTGAAGAATTGTGTATCGATCGATGTCTGGTGGTGTGATCAGCATGGTGGTCGCGCCATGGATTCTCGCTTGCGGGTTCTTGCTCTGCTCATCCTCCTTCCTCGGAGCTGAAGGCGCCATTGGTGTGAACTACGGCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGAACATCAACTAC GTCC GCCTCTTCCACCCGGACACCG CCGTCCTCGCCGCGCTCCGCAACTCCGGCATCGGCGTCGTCCTCGGCACGTACAACGAGGACCTCGCCCGCCTCGCCTCCGACCCCTCGTTTGCCGCCTCCTGGGTCAGCTCCTACGTCCAGCCCTTCGCCGGCGCCGTCAGCTTCCGCTACATCAACGCCGGCAACGAGGTCAT CCCCGGCGACCCCGCC GC CAACGTCCTCCCGGCCATGCGCAACCTCGACGCCGCGCTCAAGGCCGCCGGGATCAGCGGCATCCCGGTCACCACCGCCGTCGCCACGTCCGTGCTCGGCGTCTCGTACCCCGCCGTCGCAGGGCGCGTTCTCGGAGGCGGCGTCGCCGTACATGGCGCCGATCGTCGCCTACCTCGCGTCCAGGGGCGCGCCGCTGCTGGTGAACGTGTA ]
[+] EMBL AB027432 [ ACGGCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGAACATCAACTAC GTCC GCCTCTTCCACCCGGACACCG CCGTCCTCGCCGCGCTCCGCAACTCCGGCATCGGCGTCGTCCTCGGCACGTACAACGAGGACCTCGCCCGCCTCGCCTCCGACCCCTCGTTTGCCGCCTCCTGGGTCAGCTCCTACGTCCAGCCCTTCGCCGGCGCCGTCAGCTTCCGCTACATCAACGCCGGCAACGAGGTCAT CCCCGGCGACCCCGCC GC CAACGTCCTCCCGGCCATGCGCAACCTCGACGCCGCGCTCAAGGCCGCCGGGATCAGCGGCATCCCGGTCACCACCGCCGTCGCCACGTCCGTGCTCGGCGTCTCGTA CCCGCCGTCGCAGGGCGCGTTCTCGGAGGCGGCGTCGCCGTACATGGCGCCGATCGTCGCCTACCTCGCGTCCAGGGGCGCGCCGCTGCTGGTGAACGTGTACCCCTACTTCGCGTACGCCGCGGACGCGG AGCGCGTGCAGCTCGGGTACGCGCTGCTGTCGGCGTCGCAGTCGGCGTCGGTGACCGACGGCGGCGTGACATACACCAACATGTTCGACGCGATCGTGGACGCGGCGCACGCGG CGGTGGAGAAGGCGACGGGCGGGCAGGCGGTGGAGCTGGTGGTGTCGGAGACCGGCTGGCCGTCCGGTGGCGGCGGCGTGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACCTGATCCGCCACGTCT CCGGCGGCGCCGGGACGCCGCGGCGGCCGGGGAAGCCGGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCCATTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCA ]
[+] EMBL OSR09891A [ ACGGCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGAACATCAACTAC GTCC GCCTCTTCCACCCGGACACCG CCGTCCTCGCCGCGCTCCGCAACTNCGGCATCGGCGTCGTCCTCGGCACGTACAACGAGGACCTCGCCCGCCTCGCCTCCGACCCCTCGTTTGCCGCCTCCTGGGTCAGCTCCTACGTCCAGCCCTTCGCCGGCGCCGTCAGCTTCCGCTACATCAACGCCGGCAACGNGGTCAT CCCCGGCGNACCCGCC GCACAACGT CTCCCGGCCATGCGC ]
[+] EMBL AB027431 [ ACGGCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGAACATCAACTAC GTCC GCCTCTTCCACCCGGACACCG CCGTCCTCGCCGCGCTCCGCAACTCCGGCATCGGCGTCGTCCTCGGCACGTACAACGAGGACCTCGCCCGCCTCGCCTCCGACCCCTCGTTTGCCGCCTCCTGGGTCAGCTCCTACGTCCAGCCCTTCGCCGGCGCCGTCAGCTTCCGCTACATCAACGCCGGCAACGAGGTCAT CCCCGGCGACCCCGCC GC CAACGTCCTCCCGGCCATGCGCAACCTCGACGCCGCGCTCAAGGCCGCCGGGATCAGCGGCATCCCGGTCACCACCGCCGTCGCCACGTCCGTGCTCGGCGTCTCGTA CCCGCCGTCGCAGGGCGCGTTCTCGGAGGCGGCGTCGCCGTACATGGCGCCGATCGTCGCCTACCTCGCGTCCAGGGGCGCGCCGCTGCTGGTGAACGTGTACCCCTACTTCGCGTACGCCGCGGACGCGG AGCGCGTGCAGCTCGGGTACGCGCTGCTGTCGGCGTCGCAGTCGGCGTCGGTGACCGACGGCGGCGTGACATACACCAACATGTTCGACGCGATCGTGGACGCGGCGCACGCGG CGGTGGAGAAGGCGACGGGCGGGCAGGCGGTGGAGCTGGTGGTGTCGGAGACCGGCTGGCCGTCCGGTGGCGGCGGCGTGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACCTGATCCGCCACGTCT CCGGCGGCGCCGGGACGCCGCGGCGGCCGGGGAAGCCGGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCCATTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCA ]
[+] EMBL OSR09901A [ ACGGCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGAACATCAACTAC GTCC GCCTCTTCCACCCGGACACCG CCGTCCTCGCCGCGCTCCGCAACTCCGGCATCGGCGTCGTCCTCGGCACGTACAACGAGGACCTCGCCCGCCTCGCCTCCGACCCATCGTTTGCCGCCTCCTGGGTCAGCTCCTACGTCCAGCCCTTCGCCGGCGCCGTCAGCTTCCGCTACATCAACGCCGGCAACGAGGTCATCCCCCGGCGACCCCGCCGGC CAAAGTNCTCCCGGCatc ]
[+] EMBL CB684609 [ GGGACTCCCTGGCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGAACATCAACTACTGTCCAGCCTCTTCCACCCGGACACCGTCCGGCCTCGCCGCGCTCCGCAACTCCGGCATCGGCGTCGTCCTCGGCACGGACAACGAGGACCTCGCCCGCCTCGCCTCCGAGCCCTCGTTTGCCGCCTCCTGGGTCAGCTCCTACGTCCAGCCCTTCGCCGGAGCCGTCAGCTTCCGCTACATCAACGCCGGCAACGAGGTCAT CCCCGGAGACCCCGCC GC CAACGTCCTCCCGGCCATGCGCAACCTCGACGCCGCGCTCAAGGCCGCCGGGATCAGCGGCATCCCGGTCACCACCGCCGTCGCCACGTCCGTGCTCGGCGTCTCGTA CCCGCCGTCGCAGGGCGCGTTCTCGGAGGCGGCGTCTCCGTACATGGCGCCGATCGTCGCCTACCTCGCGTCCAGGGGCGCGCCGCTGCTGGTGAACGTGTACCCCTACTTCGCGTACGCCGCGGACGCGG AGCGCGTGCAGCTCGGGTACGCGCTGCTGTCGGCGTCGCAGTCGGCGTCGGTGACCGACGGCGGCGTGACATACACCAACATGTTCGACGCGATCGTGGACGCGGCGCACGCGG CGGTGGAGAAGGCGACAGGCGGGCATGCGGTGGAGC ]
[-] EMBL CB684610 [ GCATCCCGGTCACCACCGCCGTCGCCACGTCCGTGCTCGGCGTCTCGTA CCCGCCGTCGCAGGGCGCGTTCTCGGAGGCGGCGTCGCCGTACATGGCGCCGATCGTCGCCTACCTCGCGTCCAGGGGCGCGCCGCTGCTGGTGAACGTGTACCCCTACTTCGCGTACGCCGCGGACGCGG AGCGCGTGCAGCTCGGGTACGCGCTGCTGTCGGCGTCGCAGTCGGCGTCGGTGACCGACGGCGGCGTGACATACACCAACATGTTCGACGCGATCGTGGACGCGGCGCACGCGG CGGTGGAGAAGGCGACGGGCGGGCAGGCGGTGGAGCTGGTGGTGTCGGAGACCGGCTGGCCGTCCGGTGGCGGCGGCGTGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACCTGATCCGCCACGTCT CCGGCGGCGCCGGGACGCCGCGGCGGCCGGGGAAGCCGGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCCATTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCATTTGTTGTCGATGCA CATTGGAGTATGATTTATTCAAACGCACGAA ]
[-] EMBL CB647945 [ CGCGGAAGCGCGTGCAGATCGGGTACGCGCTGCTGTCGGCGTCGCAGTCGGCGTCGGTGACCGACGGCGGCGTGACATACACCAACATGTTCGACGCGATCGTGGACGCGGCGCACGCGGCCGGTGGAGAAGGCGCCGGGCGGGCAGGCGGTGGAGCTGGTGGTGTCGGAGACCGGCTGGCCGTCCGGTGGCGGCGGCGTGGGCGCCCCCGTGGAGAACGCGGCGGCGTACAACAACAACCTGATCCGCCACGTTT CCGGCGGCGCCGGGACGCCGCGGCGCCCGGGGAAGCCGGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTTTTCCAGCCCGACATGACCGAAGTCTCCCATGTGGACTTCGCGGCCTCCAGCTAGATTAGGCCCGCCCCATTTCACATTTTTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATCCAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCCCCGGTGCTCTGATTTGGAAACGGGGTTCATTTGTTGTCGAT ]
[+] EMBL AU082734 [ GCTGGCCGTCCGGTGGCGGCGGCGTGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACCTGATCCGCCACGTCT CCGGCGGCGCCGGGACGCCGCGGCNNCCGGGGAAGCCGGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCCATTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCATTTGTTGTCGATGCA CATTGGAGTATGATTTATTCAAACGCACGAATTTTACGAAAAAAAAAAAAA ]
[+] EMBL AU164658 [ TCCGCCACGTCTCCCGGCGNCGCCGGGACGCNGCGGCGGCCGGGGAAGCCGGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGNCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCNNTTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCATTTGTTGTCGAaaaa ]
[+] EMBL AU164659 [ CCGGTGGAGACGTACCTGTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCNNTTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCATTTGTTGTCGAaaaa ]
[+] EMBL AU075511 [ GAGGGCGTGGAGCAGCA TTCGGCCTNTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCCATTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTNGTTTCGGTTCGATCTCATGTCNCCGGTGCTCTGATTTGGATTCATTGTTCATTTGTTGTCGATGCA CATTGGNGTATGATTTATTCAAACGCACGAATTTTACGAGAAGATAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI808412 [ TGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTTCTCTGATTTGGATTCATTGTTCATTTGTTGTCGATGCACCCCCCCCAGTATGATTTATTCAAAaaaaaa ]
consensusID : consensus_15346#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1269 fasta sequence
[GGAAAGGAGATACAGTTCTCAGATAGTTTCTGCTACCTTTGCTGCCGCGCGCTGCAGAAGATCGGCGAGATGGATGCTGTGTTGGTTACCGCCGCCATCTTCGGGTTGCTGCTCTGCGGCTGCTCGGTTTCAGGAGTGGAAGGTATCGGTGTGAACTATGGCATGATCGGCAACAACCTCCCGTCGCCGGACAAGGTCATCGCCCTGTACAGAGCCAGCAACATCACCGACATCCGCCTCTTCCACCCGGACACCACCGTGCTCGCCGCGCTCCGCGGCTCGGGCCTCGGCGTCGTGCTCGGCACGCTCAACGAGGACCTGGCACGCCTCGCCACCGACGCCTCGTTCGCGGCGTCGTGGGTCCAGTCGTACGTGCAGCCCTTCGCCGGCGCCGTCCGCTTCCGCTACATCAACGCCGGCAACGAGGTCATCCCTGGGGACGAGGCGGCGAGCGTCCTCCCGGCCATGAGGAACCTCCAGTCGGCGCTGCGCGCCGCGGGGCTCGGCGTGCCGGTCACGACGGTCGTCGCGACGTCGGTGCTGGGCTCCTCGTACCCGCCGTCGCAGGGCGCGTTCTCCGAGGCCGCGCTGCCGACGGTGGCGCCGATCGTCTCCTTCCTGGCGTCGAGCGGGACGCCCCTGCTGGTGAACGTGTACCCGTACTTCGCCTACTCCGCCGACCCGTCGTCGGTGCGGCTCGACTACGCGCTGCTGTCGCCGTCGACGTCGGCGGCCGTGACGGACGGCGGTGTCACGTACACCAACATGTTCGACGCCATCCTGGACGCGGTGTACGCGGCGCTGGAGAAGGCGGGCGGGCAGGGCCTGGAGGTGGTGGTGTCGGAGACCGGGTGGCCGTCGGGCGGCGGCGGGGCCGGCGCCAGCGTGGAGAACGCGGCGGCGTACAGCAACAACCTGGTGCGCCACGTCGGGCGCGGCACGCCGCGGCGGCCCGGGAAGGCCGTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGAACTTCGGCCTGTTCCACCCGGACATGAGCGCGGTCTACCACGTCGACTTCTCGGCGTGATCATCTTAATCAGGCAGCGACGGCGGGGGCGACGCTCCATGGATTTGGACTCATCGTGTGCATGAGTTACTTAAGTACCAATTTTAGGAAGTTAGTAGTATGATTACAATATTGGACAAAGATATTTGACATCGATATGTATATGATTCCGCTGCATTTCTGATTAATTACCAGCATTCACCTGTT]
[+] EMBL AK060529 [GGAAAGGAGATACAGTTCTCAGATAGTTTCTGCTACCTTTGCTGCCGCGCGCTGCAGAAGATCGGCGAGATGGATGCTGTGTTGGTTACCGCCGCCATCTTCGGGTTGCTGCTCTGCGGCTGCTCGGTTTCAGGAGTGGAAGGTATCGGTGTGAACTATGGCATGATCGGCAACAACCTCCCGTCGCCGGACAAGGTCATCGCCCTGTACAGAGCCAGCAACATCACCGACATCCGCCTCTTCCACCCGGACACCACCGTGCTCGCCGCGCTCCGCGGCTCGGGCCTCGGCGTCGTGCTCGGCACGCTCAACGAGGACCTGGCACGCCTCGCCACCGACGCCTCGTTCGCGGCGTCGTGGGTCCAGTCGTACGTGCAGCCCTTCGCCGGCGCCGTCCGCTTCCGCTACATCAACGCCGGCAACGAGGTCATCCCTGGGGACGAGGCGGCGAGCGTCCTCCCGGCCATGAGGAACCTCCAGTCGGCGCTGCGCGCCGCGGGGCTCGGCGTGCCGGTCACGACGGTCGTCGCGACGTCGGTGCTGGGCTCCTCGTACCCGCCGTCGCAGGGCGCGTTCTCCGAGGCCGCGCTGCCGACGGTGGCGCCGATCGTCTCCTTCCTGGCGTCGAGCGGGACGCCCCTGCTGGTGAACGTGTACCCGTACTTCGCCTACTCCGCCGACCCGTCGTCGGTGCGGCTCGACTACGCGCTGCTGTCGCCGTCGACGTCGGCGGCCGTGACGGACGGCGGTGTCACGTACACCAACATGTTCGACGCCATCCTGGACGCGGTGTACGCGGCGCTGGAGAAGGCGGGCGGGCAGGGCCTGGAGGTGGTGGTGTCGGAGACCGGGTGGCCGTCGGGCGGCGGCGGGGCCGGCGCCAGCGTGGAGAACGCGGCGGCGTACAGCAACAACCTGGTGCGCCACGTCGGGCGCGGCACGCCGCGGCGGCCCGGGAAGGCCGTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGAACTTCGGCCTGTTCCACCCGGACATGAGCGCGGTCTACCACGTCGACTTCTCGGCGTGATCATCTTAATCAGGCAGCGACGGCGGGGGCGACGCTCCATGGATTTGGACTCATCGTGTGCATGAGTTACTTAAGTACCAATTTTAGGAAGTTAGTAGTATGATTACAATATTGGACAAAGATATTTGACATCGATATGTATATGATTCCGCTGCATTTCTGATTAATTACCAGCATTCACCTGTT]
[+] EMBL AK099192 [ GAAAGGAGATACAGTTCTCAGATAGTTTCTGCTACCTTTGCTGCCGCGCGCTGCAGAAGATCGGCGAGATGGATGCTGTGTTGGTTACCGCCGCCATCTTCGGGTTGCTGCTCTGCGGCTGCTCGGTTTCAGGAGTGGAAGGTATCGGTGTGAACTATGGCATGATCGGCAACAACCTCCCGTCGCCGGACAAGGTCATCGCCCTGTACAGAGCCAGCAACATCACCGACATCCGCCTCTTCCACCCGGACACCACCGTGCTCGCCGCGCTCCGCGGCTCGGGCCTCGGCGTCGTGCTCGGCACGCTCAACGAGGACCTGGCACGCCTCGCCACCGACGCCTCGTTCGCGGCGTCGTGGGTCCAGTCGTACGTGCAGCCCTTCGCCGGCGCCGTCCGCTTCCGCTACATCAACGCCGGCAACGAGGTCATCCCTGGGGACGAGGCGGCGAGCGTCCTCCCGGCCATGAGGAACCTCCAGTCGGCGCTGCGCGCCGCGGGGCTCGGCGTGCCGGTCACGACGGTCGTCGCGACGTCGGTGCTGGGCTCCTCGTACCCGCCGTCGCAGGGCGCGTTCTCCGAGGCCGCGCTGCCGACGGTGGCGCCGATCGTCTCCTTCCTGGCGTCGAGCGGGACGCCCCTGCTGGTGAACGTGTACCCGTACTTCGCCTACTCCGCCGACCCGTCGTCGGTGCGGCTCGACTACGCGCTGCTGTCGCCGTCGACGTCGGCGGCCGTGACGGACGGCGGTGTCACGTACACCAACATGTTCGACGCCATCCTGGACGCGGTGTACGCGGCGCTGGAGAAGGCGGGCGGGCAGGGCCTGGAGGTGGTGGTGTCGGAGACCGGGTGGCCGTCGGGCGGCGGCGGGGCCGGCGCCAGCGTGGAGAACGCGGCGGCGTACAGCAACAACCTGGTGCGCCACGTCGGGCGCGGCACGCCGCGGCGGCCCGGGAAGGCCGTGGAGACGTACATCTTCGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGAACTTCGGCCTGTTCCACCCGGACATGAGCGCGGTCTACCACGTCGACTTCTCGGCGTGATCATCTTAATCAGGCAGCGACGGCGGGGGCGACGCTCCATGGATTTGGACTCATCGTGTGCATGAGTTACTTAAGTACCAATTTTAGGAAGTTAGTAGTATGATTACAATATTGGACAAAGATATTTGACATCGATATGTATATGATTCCGCTGCATTTCTGATTAATTACCAGCATTCACC ]
consensusID : consensus_15346#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 269 fasta sequence
[CGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCCATTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF312474 [CGCCATGTTCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACATGACCGAAGTCTACCATGTCGACTTCGCGGCCTCCAGCTAGATTAGGCCCGGCCCATTTCACATTTCTTTCTTTCAGCTGCTGCTACTATTTTATTATTTGTCGGATACAGTATTTTCGTAGTTTCGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_15346#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 113 fasta sequence
[AGCTCGTGCCGAATTCGGCACGAGATTTTATTATATGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCATTTGT]
[+] EMBL BE228362 [AGCTCGTGCCGAATTCGGCACGAGATTTTATTATATGTCGGATACAGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGTTCATTTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15346#0 CGCGCGCGCGCAGGTTCAGATAGTTTCAGGCTTGGGAGGAAGGAAGGAGAGGCAGAGAGA 60
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 ------------------------------------------------------------
consensus_15346#0 GAATTTTTGTCTGAGAGAATTCAGATTTCAGAGAGATAATTTTCGTCTGAAGAATTGTGT 120
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 --------------------------------GGAAAGGAGATACAGTTCTCAGATAGTT 28
consensus_15346#0 ATCGATCGATGTCTGGTGGTGTGATCAGCATGGTGGTCGCGCCATGGATTCTCGCTTGCG 180
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 TCTGCTACCTTTGCTGCCGCGCGCTGCAGAAGATCGGCGAGATGGATGCTGTGTTGGTTA 88
consensus_15346#0 GGTTCTTGCTCTGCTCATCCTCCTTCCTCGGAGCTGAAGGCGCCATTGGTGTGAACTACG 240
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 CCGCCGCCATCTTCGGGTTGCTGCTCTGCGGCTGCTCGGTTTCAGGAGTGGAAGGTATCG 148
consensus_15346#0 GCATGCTGGGGAACAACCTGCCGTCGCCGGCGCAGGTGATCTCCATGTACAAGGCCAAGA 300
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 GTGTGAACTATGGCATGATCGGCAACAACCTCCCGTCGCCGGACAAGGTCATCGCCCTGT 208
consensus_15346#0 ACATCAACTACGTCCGCCTCTTCCACCCGGACACCGCCGTCCTCGCCGCGCTCCGCAACT 360
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 ACAGAGCCAGCAACATCACCGACATCCGCCTCTTCCACCCGGACACCACCGTGCTCGCCG 268
consensus_15346#0 CCGGCATCGGCGTCGTCCTCGGCACGTACAACGAGGACCTCGCCCGCCTCGCCTCCGACC 420
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 CGCTCCGCGGCTCGGGCCTCGGCGTCGTGCTCGGCACGCTCAACGAGGACCTGGCACGCC 328
consensus_15346#0 CCTCGTTTGCCGCCTCCTGGGTCAGCTCCTACGTCCAGCCCTTCGCCGGCGCCGTCAGCT 480
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 TCGCCACCGACGCCTCGTTCGCGGCGTCGTGGGTCCAGTCGTACGTGCAGCCCTTCGCCG 388
consensus_15346#0 TCCGCTACATCAACGCCGGCAACGAGGTCATCCCCGGCGACCCCGCCGCCAACGTCCTCC 540
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 GCGCCGTCCGCTTCCGCTACATCAACGCCGGCAACGAGGTCATCCCTGGGGACGAGGCGG 448
consensus_15346#0 CGGCCATGCGCAACCTCGACGCCGCGCTCAAGGCCGCCGGGATCAGCGGCATCCCGGTCA 600
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 CGAGCGTCCTCCCGGCCATGAGGAACCTCCAGTCGGCGCTGCGCGCCGCGGGGCTCGGCG 508
consensus_15346#0 CCACCGCCGTCGCCACGTCCGTGCTCGGCGTCTCGTACCCGCCGTCGCAGGGCGCGTTCT 660
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 TGCCGGTCACGACGGTCGTCGCGACGTCGGTGCTGGGCTCCTCGTACCCGCCGTCGCAGG 568
consensus_15346#0 CGGAGGCGGCGTCGCCGTACATGGCGCCGATCGTCGCCTACCTCGCGTCCAGGGGCGCGC 720
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 GCGCGTTCTCCGAGGCCGCGCTGCCGACGGTGGCGCCGATCGTCTCCTTCCTGGCGTCGA 628
consensus_15346#0 CGCTGCTGGTGAACGTGTACCCCTACTTCGCGTACGCCGCGGACGCGGAGCGCGTGCAGC 780
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 GCGGGACGCCCCTGCTGGTGAACGTGTACCCGTACTTCGCCTACTCCGCCGACCCGTCGT 688
consensus_15346#0 TCGGGTACGCGCTGCTGTCGGCGTCGCAGTCGGCGTCGGTGACCGACGGCGGCGTGACAT 840
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 CGGTGCGGCTCGACTACGCGCTGCTGTCGCCGTCGACGTCGGCGGCCGTGACGGACGGCG 748
consensus_15346#0 ACACCAACATGTTCGACGCGATCGTGGACGCGGCGCACGCGGCGGTGGAGAAGGCGACGG 900
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 GTGTCACGTACACCAACATGTTCGACGCCATCCTGGACGCGGTGTACGCGGCGCTGGAGA 808
consensus_15346#0 GCGGGCAGGCGGTGGAGCTGGTGGTGTCGGAGACCGGCTGGCCGTCCGGTGGCGGCGGCG 960
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 AGGCGGGCGGGCAGGGCCTGGAGGTGGTGGTGTCGGAGACCGGGTGGCCGTCGGGCGGCG 868
consensus_15346#0 TGGGCGCCACCGTGGAGAACGCGGCGGCGTACAACAACAACCTGATCCGCCACGTCTCCG 1020
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ------------------------------------------------------------
consensus_15346#1 GCGGGGCCGGCGCCAGCGTGGAGAACGCGGCGGCGTACAGCAACAACCTGGTGCGCCACG 928
consensus_15346#0 GCGGCGCCGGGACGCCGCGGCGGCCGGGGAAGCCGGTGGAGACGTACCTGTTCGCCATGT 1080
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 ----------------------------------------------------CGCCATGT 8
consensus_15346#1 TCGGGCGCGGCACGCCGCGGCGGCCCGGGAAGGCCGTGGAGACGTACATCTTCGCCATGT 988
consensus_15346#0 TCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACA 1140
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 TCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGCATTTCGGCCTCTTCCAGCCCGACA 68
consensus_15346#1 TCAACGAGAACCAGAAGCCCGAGGGCGTGGAGCAGAACTTCGGCCTGTTCCACCCGGACA 1048
consensus_15346#0 TGACCGAAGTCTACCATGTCGACTTCGCGGCCT--CCAGCTAGATTAGGCC----CGGCC 1194
consensus_15346#3 ------------------------------------------------------------
consensus_15346#2 TGACCGAAGTCTACCATGTCGACTTCGCGGCCT--CCAGCTAGATTAGGCC----CGGCC 122
consensus_15346#1 TGAGCGCGGTCTACCACGTCGACTTCTCGGCGTGATCATCTTAATCAGGCAGCGACGGCG 1108
consensus_15346#0 CATTTCACATTTCTTTCTTTCAGCTGC----TGC-TACTATTTTATTATTTGTCGGATAC 1249
consensus_15346#3 -----------AGCTCGTGCCGAATTC----GGCACGAGATTTTATTATATGTCGGATAC 45
consensus_15346#2 CATTTCACATTTCTTTCTTTCAGCTGC----TGC-TACTATTTTATTATTTGTCGGATAC 177
consensus_15346#1 GGGGCGACGCTCCATGGATTTGGACTCATCGTGTGCATGAGTTACTTAAGTACCAATTTT 1168
* * * * ** *** * * *
consensus_15346#0 AGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGT 1309
consensus_15346#3 AGTATTTTCGTAGTTTCGGTTCGATCTCATGTCACCGGTGCTCTGATTTGGATTCATTGT 105
consensus_15346#2 AGTATTTTCGTAGTTTCGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 237
consensus_15346#1 AGGAAGTTAGTAGTAT-GATTACAATATTGGACAAAGATATTTGACATCGATATGTATAT 1227
** * ** ***** * * ** * *
consensus_15346#0 TCATTTGTTGTCGATGCACATTGGAGTATGATTTATTCAAACGCACGAATTTTACGAAAA 1369
consensus_15346#3 TCATTTGT---------------------------------------------------- 113
consensus_15346#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------- 269
consensus_15346#1 GATTCCGCTGCATTTCTGATTAATTACCAGCATTCACCTGTT------------------ 1269
consensus_15346#0 AAAAAAAAAAAAAAAAAAAAAAAAAA 1395
consensus_15346#3 --------------------------
consensus_15346#2 --------------------------
consensus_15346#1 --------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||