These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15350#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1080 fasta sequence [CAGCCGCAGCAGCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC-GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT-GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT-CCTGA-CAA-AGAAAAATATGAACTTA-GGTAAAGCG-GCATTGA-TTA-CTGTTGGGGGTCTT-GCGGTCGGTGCGACAGTCGGATC-TG-CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC-ACTCCCCT-GCTGTTGTTGTCAGTGAATTTATTCTGTTCT-CCCATT-GT-TGGTCTCGCTGTTTGTTAGATAGGA-TTAAAAA-CA-AGTTGTCAGCCTGGCCTGTAATTAA-CCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAG-CAGCTGTGTATA-GCAAAC-ATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCCAAAAAAAAAAAAAA] [+] EMBL C72352 [CAGCCGCAGCAGCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGNGTCGGGGTCCCGCGCCGC GCGGC CCTGGGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCTTGCAA GACGACCAGGANGCCGTNGCGCAAGTTGAGGCTGCTTAT AAATGCT ] [+] EMBL AU173965 [ AGCCGCAGCAGCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGCAGGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGAC ] [+] EMBL CB682866 [ GCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAA AGAAAAATATGAACTTA TGTAAAGCG GCATTGA TTA CTGTTGGGGGTCTT GCGGTCGGTGCGACAGT ] [+] EMBL CF326140 [ CCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATC ] [+] EMBL CF325492 [ CCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGTTGGGCGTCTTCGAG ] [+] EMBL CB682977 [ ccctctttGGAGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAA AGAAAAATATGAACTTA GGTAAAGCG GCATTGA TTA CTGTTGGGGGTCTT GCGGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGT ] [-] EMBL CB682978 [ AGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAA AGAAAAATATGAACTTA GGTAAAGCG GCATTGA TTA CTGTTGGGGGTCTT GCGGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC ACTCCCCT GCTGTTGTTGTCAGTGAA ] [-] EMBL CF326103 [ TCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAA AGAAAAATATGAACTTA GGTAAAGCG GCATTGA TTA CTGTTGGGGGTCTT GCGGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC ACTCCCCT GCTGTTGTTGTCAGTGAA ] [+] EMBL BI810541 [ GCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAAGAG AAAATATGAACTTA GGTAAAGCG GCATTGA TTA CT TTGGGGTTCTT CAGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC ACTCCCCT GCTGTTGTTGTCAGTGAATTTATTCTGTTCT CCCATT GT TGGTCTCGCTGTTTGTTAGATAGGA TTAAAAA CA AGTTGTCAGCCTGGCCTGTAATTAA CCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAG CAGCTGTGTATA GCAAAC ATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCCAAAAAAAAAA ] [+] EMBL BI811650 [ GGTGCTTCATTGTATTTCCCTGACCAA AGAAAAATATGAACTTA GGTAAAGCGCCCATTGA TTACCTGTTGGGGTTCTTCCCAGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC ACTCCCCT GCTGTTGTTGTCAGTGAATTTATTCTGTTCT CCCATT GT TGGTCTCGCTGTTTGTTAGATAGGA TTAAAAA CA AGTTGTCAGCCTGGCCTGTAATTAA CCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCA CAGCTGTGTATA CAAAC ATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAaaaaaaa ] [+] EMBL BM421256 [ agTGAACTTATGGTAAATCG GCATTGATTTA CTGTTGGGGGTCTT NCAGTCGGNGCGACAGTCGGATCTTGCCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCTACTCCCCTGGCTGTTGTTGTCAGTGAATTTATTCTGTTCTCCCCATTGGTNTGGTCTCGCTGTTTGTTAGATAGGAGTTAAAAACCACAGTTGTCAGCCTGGCCTGTAATTAACCCGAGATGAGCTAGCTCCGAAAAAGTCACGGAAAGGCATCTTTCTCCTGAAGATGCCAGCCAGCTGTGTATANCCAACC ATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATNTAGTCTCTTTTCAGTCCCAAAAAAAAAA ] [+] EMBL AU173966 [ GTTAGATAGGA TTAAAAA CA AGTTGTCAGCCTGGCCTGTAATTAA CCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTNTCCTGAAGATGCCAG CAGCTGTGTATA GCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCNAAAAAAAAAAAAAA] consensusID : consensus_15350#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 681 fasta sequence [GTTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCAAATCTTGCTCTTCCTTACTGAAATTGATTGTGGAGCGTGTGGGTTGTGAGTTTCACTGTTTGACAGCAAAGTGGACTATTGATCCTTACAAGTGGTGAAGGGGGGCCACTGTGCTGATTGAAGATCTTGCAATCTGACCAACCTTGGCATCAAACTTCGTATGCAGCTGCAGTTCTTTCAGTAGGTTGAACCTGCAAAATGTATTCTTTAGTTTATCAGAATTTCTGTCATCCAAGGATGGCCCAATATTCGTGGTGAAATTGGCAGATGCCACATGCCAGTATTTGGATTGCTTTGCATCTAGTCACTGATGACATCTGAATGTGGATGCTTACAGGGGTTGGATTATTTGTTGTAGAACTCTAGTTTCCTTACCACCAACACAAACCTTATGAATGGTTTGGCAACATTCTAGATATCATGTATATATTCTACACTGTTTGTTGCAGTTTTTTTGTGCTATTACCAATTGAAGAAGTTTGGTCAGGTAATTT] [+] EMBL CB684455 [GTTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTC ] [+] EMBL AA753027 [GTTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATGANCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTC ] [-] EMBL CB682867 [ TTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCAAATCTTGCTCTTCCTTACTGAAATTGATTGTGGAGCGTGTGGGTTGTGAGTTTCACTGTTTGACAGCAAAGTGGACTATTGATCCTTACAAGTGGTGAAGGGGGGCCACTGTGCTGATTGAAGATCTTGCAATCTGACCAACCTTGGCATCAAACTTCGTATGCAGCTGCAGTTCTTTCAGTAGGTTGAACCTGCAAAATGTATTCTTTAGTTTATCAGAATTTCTGTCATCCAAGGATGGCCCAATATTCGTGGTGAAATTGGCAGATGCCACATGCCAGTATTTGGATTGCTTTGCATCTAGTCACTGATGACATCTGAATGTGGATGCTTACAGGGGTTGGATTATTTGTTGTAGAACTCTAGTTTCCTTACCACCAACACAAACCTTATGAATGGTTTGGCAACATTCTAGATATCATGTATATATTCTACACTGTTTGTTGCAGTTTTTTTGTGCTATTACCAATTGAAGAAGTTTGGTCAGGTAATTT] consensusID : consensus_15350#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 619 fasta sequence [ACGCACACAGCCGCAGCAGCAGCAGTCGCGCACACACAGAAGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA-AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA] [+] EMBL AK120282 [ACGCACACAGCCGCAGCAGCAGCAGTCGCGCACACACAGAAGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA] [+] EMBL CB000974 [ GCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAATGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA] [+] EMBL AT003522 [ AAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTGGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA] [+] EMBL CB681764 [ ATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA] [+] EMBL BI809757 [ TACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACACAAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCAGTCGGTGCGACAGTCGGATCT CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA] consensusID : consensus_15350#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 385 fasta sequence [GAAGTAGTGGGATCCCCCGGGGNTGCAGGAATTCGGGCACGAGGAANGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTGGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA] [+] EMBL AT003693 [GAAGTAGTGGGATCCCCCGGGGNTGCAGGAATTCGGGCACGAGGAANGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTGGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15350#2 ------------------------------------------------------------ consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 CAGCCGCAGCAGCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGG 60 consensus_15350#1 ------------------------------------------------------------ consensus_15350#2 ------------------------------------------------------------ consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 CGCTCTCCCTGAGCGGCGGCGGGGGCGGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGG 120 consensus_15350#1 ------------------------------------------------------------ consensus_15350#2 ------------------------------------------------------------ consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 CGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCC 180 consensus_15350#1 ------------------------------------------------------------ consensus_15350#2 --------------------------------------------ACGCACACAGCCGCAG 16 consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 TGGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGG 240 consensus_15350#1 ----------------------------GTTAGATAGGATTAAAAACAAGTTGTCAGCCT 32 consensus_15350#2 CAGCAGCAGTCGCGC-ACACACAGAAGCCGAGGGCGCATCCTTCGACGACATCATGCGCG 75 consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 AGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCG 300 consensus_15350#1 GGCCTGTAATTAACCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCC 92 consensus_15350#2 CCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGC-----AGGT 130 consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 CCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGC-----AGGT 355 consensus_15350#1 TGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTT 152 consensus_15350#2 TGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGT 190 consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 TGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGT 415 consensus_15350#1 TAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCAAATCTT-GCTCTTCCTTACTGAAAT 211 consensus_15350#2 TGTTGATAACAGCATCCGCTATGCTGACGTCAA-ACCTGTAAAAAGTGCAGGTTCAGGCA 249 consensus_15350#3 -----------------------------------------GAAGTAGTGGGATCC--CC 17 consensus_15350#0 TGTTGATAACAGCATCCGCTATGCTGACGTCAA-ACCTGTAAAAAGTGCAGGTTCAGGCA 474 consensus_15350#1 TGATTGTGG-AGCGTGTGGGTTGTGAGTTTCACTGTTTGACAGCAAAGTGGACTATTGAT 270 * * * consensus_15350#2 CAGTACCA-CAGTGGATGCAAGCAACCATGAAGAACGCAC-CCGTGACATTTGA--GGCT 305 consensus_15350#3 CGGGGNTG-CAG-GAATTCGGGCACGAGGAANGAACGCAC-CCGTGACATTTGA--GGCT 72 consensus_15350#0 CAGTACCA-CAGTGGATGCAAGCAACCATGAAGAACGCAC-CCGTGACATTTGA--GGCT 530 consensus_15350#1 CCTTACAAGTGGTGAAGGGGGGCCACTGTGCTGATTGAAGATCTTGCAATCTGACCAACC 330 * * * * ** ** * * * ** ** *** * consensus_15350#2 CCATCTTCGAGCAGCTTGGGTATC--CAATCATGCGTTTATGGTGCACTGATGGTTTTCA 363 consensus_15350#3 CCATCTTCGAGCAGCTTGGGTATC--CAATCATGCGTTTATGG-GCACTGATGGTTTTCA 129 consensus_15350#0 CCATCTTCGAGCAGCTTGGGTATC--CAATCATGCGTTTATGGTGCACTGATGGTTTTCA 588 consensus_15350#1 TTGGCATCAAACTTCGTATGCAGCTGCAGTTCTTTCAGTAGGTTGAACCTGCAAAATGTA 390 * ** * * * * * * * ** * * ** * * ** * * consensus_15350#2 CTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTG 423 consensus_15350#3 CTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTGGCCCTGATGTGCCTG 189 consensus_15350#0 CTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTG 648 consensus_15350#1 TTCTTTAGTTTATCAGAATTTCTGTCATCCAAGGATGGCCCAATATTCGTGGTGAAATTG 450 * * * ** * * * * * * ** * * ** ** ** consensus_15350#2 GATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGA 483 consensus_15350#3 GATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGA 249 consensus_15350#0 GATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGA 708 consensus_15350#1 GCAGATGCCACATGCCAGTATTTGG-ATTGCTTTGCATCTAGTCACTGATGACA-TCTGA 508 * * *** ****** * * *** ** * * ** * * * * *** consensus_15350#2 ACTTAGGTA---AAGCGGCATTGATTACT-GTTGGGGGTCTTGCGGT-CGGTGCGACAGT 538 consensus_15350#3 ACTTAGGTA---AAGCGGCATTGATTACT-GTTGGGGGTCTTGCGGT-CGGTGCGACAGT 304 consensus_15350#0 ACTTAGGTA---AAGCGGCATTGATTACT-GTTGGGGGTCTTGCGGT-CGGTGCGACAGT 763 consensus_15350#1 ATGTGGATGCTTACAGGGGTTGGATTATTTGTTGTAGAACTCTAGTTTCCTTACCACCAA 568 * * * * * ** * ***** * **** * ** * * * * * ** consensus_15350#2 CGGATCTGCTGTGGA-GAATTGGCTACAGGTT-GATGT--TGTGCCCTTTCTAGGC-GTT 593 consensus_15350#3 CGGATCTGCTGTGGA-GAATTGGCTACAGGTT-GATGT--TGTGCCCTTTCTAGGC-GTT 359 consensus_15350#0 CGGATCTGCTGTGGA-GAATTGGCTACAGGTT-GATGT--TGTGCCCTTTCTAGGC-GTT 818 consensus_15350#1 CACAAACCTTATGAATGGTTTGGCAACATTCTAGATATCATGTATATATTCTACACTGTT 628 * * * ** * * ***** *** * *** * *** ***** * *** consensus_15350#2 -----CACTCCCCTGCTGTTGTTGTCAGTGA----------------------------- 619 consensus_15350#3 -----CACTCCCCTGCTGTTGTTGTCAGTGA----------------------------- 385 consensus_15350#0 -----CACTCCCCTGCTGTTGTTGTCAGTGAATTTATTCTGTTCTCCCATTGTTGGTCTC 873 consensus_15350#1 TGTTGCAGTTTTTTTGTGCTATTACCAATTGAAGAAGTTTGGTCAGGTAATTT------- 681 ** * * ** * ** ** * consensus_15350#2 ------------------------------------------------------------ consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 GCTGTTTGTTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATG 933 consensus_15350#1 ------------------------------------------------------------ consensus_15350#2 ------------------------------------------------------------ consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 AGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGT 993 consensus_15350#1 ------------------------------------------------------------ consensus_15350#2 ------------------------------------------------------------ consensus_15350#3 ------------------------------------------------------------ consensus_15350#0 ATAGCAAACATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTC 1053 consensus_15350#1 ------------------------------------------------------------ consensus_15350#2 --------------------------- consensus_15350#3 --------------------------- consensus_15350#0 TCTTTTCAGTCCCAAAAAAAAAAAAAA 1080 consensus_15350#1 --------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||