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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15350#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1080 fasta sequence
[CAGCCGCAGCAGCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC-GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT-GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT-CCTGA-CAA-AGAAAAATATGAACTTA-GGTAAAGCG-GCATTGA-TTA-CTGTTGGGGGTCTT-GCGGTCGGTGCGACAGTCGGATC-TG-CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC-ACTCCCCT-GCTGTTGTTGTCAGTGAATTTATTCTGTTCT-CCCATT-GT-TGGTCTCGCTGTTTGTTAGATAGGA-TTAAAAA-CA-AGTTGTCAGCCTGGCCTGTAATTAA-CCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAG-CAGCTGTGTATA-GCAAAC-ATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCCAAAAAAAAAAAAAA]
[+] EMBL C72352 [CAGCCGCAGCAGCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGNGTCGGGGTCCCGCGCCGC GCGGC CCTGGGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCTTGCAA GACGACCAGGANGCCGTNGCGCAAGTTGAGGCTGCTTAT AAATGCT ]
[+] EMBL AU173965 [ AGCCGCAGCAGCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGCAGGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGAC ]
[+] EMBL CB682866 [ GCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAA AGAAAAATATGAACTTA TGTAAAGCG GCATTGA TTA CTGTTGGGGGTCTT GCGGTCGGTGCGACAGT ]
[+] EMBL CF326140 [ CCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATC ]
[+] EMBL CF325492 [ CCACGAAGACGATGGCCACGGCCACGGCGCTCTCCCTGAGCGGCGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGTTGGGCGTCTTCGAG ]
[+] EMBL CB682977 [ ccctctttGGAGGCGGGGGC GGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGGCGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCCT GGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGGAGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAA AGAAAAATATGAACTTA GGTAAAGCG GCATTGA TTA CTGTTGGGGGTCTT GCGGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGT ]
[-] EMBL CB682978 [ AGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAA AGAAAAATATGAACTTA GGTAAAGCG GCATTGA TTA CTGTTGGGGGTCTT GCGGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC ACTCCCCT GCTGTTGTTGTCAGTGAA ]
[-] EMBL CF326103 [ TCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAA AGAAAAATATGAACTTA GGTAAAGCG GCATTGA TTA CTGTTGGGGGTCTT GCGGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC ACTCCCCT GCTGTTGTTGTCAGTGAA ]
[+] EMBL BI810541 [ GCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTT CCTGA CAAGAG AAAATATGAACTTA GGTAAAGCG GCATTGA TTA CT TTGGGGTTCTT CAGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC ACTCCCCT GCTGTTGTTGTCAGTGAATTTATTCTGTTCT CCCATT GT TGGTCTCGCTGTTTGTTAGATAGGA TTAAAAA CA AGTTGTCAGCCTGGCCTGTAATTAA CCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAG CAGCTGTGTATA GCAAAC ATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCCAAAAAAAAAA ]
[+] EMBL BI811650 [ GGTGCTTCATTGTATTTCCCTGACCAA AGAAAAATATGAACTTA GGTAAAGCGCCCATTGA TTACCTGTTGGGGTTCTTCCCAGTCGGTGCGACAGTCGGATC TG CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTC ACTCCCCT GCTGTTGTTGTCAGTGAATTTATTCTGTTCT CCCATT GT TGGTCTCGCTGTTTGTTAGATAGGA TTAAAAA CA AGTTGTCAGCCTGGCCTGTAATTAA CCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCA CAGCTGTGTATA CAAAC ATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAaaaaaaa ]
[+] EMBL BM421256 [ agTGAACTTATGGTAAATCG GCATTGATTTA CTGTTGGGGGTCTT NCAGTCGGNGCGACAGTCGGATCTTGCCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCTACTCCCCTGGCTGTTGTTGTCAGTGAATTTATTCTGTTCTCCCCATTGGTNTGGTCTCGCTGTTTGTTAGATAGGAGTTAAAAACCACAGTTGTCAGCCTGGCCTGTAATTAACCCGAGATGAGCTAGCTCCGAAAAAGTCACGGAAAGGCATCTTTCTCCTGAAGATGCCAGCCAGCTGTGTATANCCAACC ATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATNTAGTCTCTTTTCAGTCCCAAAAAAAAAA ]
[+] EMBL AU173966 [ GTTAGATAGGA TTAAAAA CA AGTTGTCAGCCTGGCCTGTAATTAA CCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTNTCCTGAAGATGCCAG CAGCTGTGTATA GCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCNAAAAAAAAAAAAAA]
consensusID : consensus_15350#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 681 fasta sequence
[GTTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCAAATCTTGCTCTTCCTTACTGAAATTGATTGTGGAGCGTGTGGGTTGTGAGTTTCACTGTTTGACAGCAAAGTGGACTATTGATCCTTACAAGTGGTGAAGGGGGGCCACTGTGCTGATTGAAGATCTTGCAATCTGACCAACCTTGGCATCAAACTTCGTATGCAGCTGCAGTTCTTTCAGTAGGTTGAACCTGCAAAATGTATTCTTTAGTTTATCAGAATTTCTGTCATCCAAGGATGGCCCAATATTCGTGGTGAAATTGGCAGATGCCACATGCCAGTATTTGGATTGCTTTGCATCTAGTCACTGATGACATCTGAATGTGGATGCTTACAGGGGTTGGATTATTTGTTGTAGAACTCTAGTTTCCTTACCACCAACACAAACCTTATGAATGGTTTGGCAACATTCTAGATATCATGTATATATTCTACACTGTTTGTTGCAGTTTTTTTGTGCTATTACCAATTGAAGAAGTTTGGTCAGGTAATTT]
[+] EMBL CB684455 [GTTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTC ]
[+] EMBL AA753027 [GTTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATGANCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTC ]
[-] EMBL CB682867 [ TTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCAAATCTTGCTCTTCCTTACTGAAATTGATTGTGGAGCGTGTGGGTTGTGAGTTTCACTGTTTGACAGCAAAGTGGACTATTGATCCTTACAAGTGGTGAAGGGGGGCCACTGTGCTGATTGAAGATCTTGCAATCTGACCAACCTTGGCATCAAACTTCGTATGCAGCTGCAGTTCTTTCAGTAGGTTGAACCTGCAAAATGTATTCTTTAGTTTATCAGAATTTCTGTCATCCAAGGATGGCCCAATATTCGTGGTGAAATTGGCAGATGCCACATGCCAGTATTTGGATTGCTTTGCATCTAGTCACTGATGACATCTGAATGTGGATGCTTACAGGGGTTGGATTATTTGTTGTAGAACTCTAGTTTCCTTACCACCAACACAAACCTTATGAATGGTTTGGCAACATTCTAGATATCATGTATATATTCTACACTGTTTGTTGCAGTTTTTTTGTGCTATTACCAATTGAAGAAGTTTGGTCAGGTAATTT]
consensusID : consensus_15350#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 619 fasta sequence
[ACGCACACAGCCGCAGCAGCAGCAGTCGCGCACACACAGAAGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA-AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA]
[+] EMBL AK120282 [ACGCACACAGCCGCAGCAGCAGCAGTCGCGCACACACAGAAGCCGAGGGCGCATCCTTCGACGACATCATGCGCGCCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGCAGGTTGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA]
[+] EMBL CB000974 [ GCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAATGTTGTTGATAACAGCATCCGCTATGCTGACGTCAAACCTGTAAAAAGTGCAGGTTCAGGCACAGTACCACAGTGGATGCAAGCAACCATGAAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA]
[+] EMBL AT003522 [ AAGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGTGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTGGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA]
[+] EMBL CB681764 [ ATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACA AAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA]
[+] EMBL BI809757 [ TACACTAGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACACAAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCAGTCGGTGCGACAGTCGGATCT CTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA]
consensusID : consensus_15350#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 385 fasta sequence
[GAAGTAGTGGGATCCCCCGGGGNTGCAGGAATTCGGGCACGAGGAANGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTGGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA]
[+] EMBL AT003693 [GAAGTAGTGGGATCCCCCGGGGNTGCAGGAATTCGGGCACGAGGAANGAACGCACCCGTGACATTTGAGGCTCCATCTTCGAGCAGCTTGGGTATCCAATCATGCGTTTATGGGCACTGATGGTTTTCACTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTGGCCCTGATGTGCCTGGATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGAACTTAGGTAAAGCGGCATTGATTACTGTTGGGGGTCTTGCGGTCGGTGCGACAGTCGGATCTGCTGTGGAGAATTGGCTACAGGTTGATGTTGTGCCCTTTCTAGGCGTTCACTCCCCTGCTGTTGTTGTCAGTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15350#2 ------------------------------------------------------------
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 CAGCCGCAGCAGCAGCAGTCGCGCACACACGAGCCACGAAGACGATGGCCACGGCCACGG 60
consensus_15350#1 ------------------------------------------------------------
consensus_15350#2 ------------------------------------------------------------
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 CGCTCTCCCTGAGCGGCGGCGGGGGCGGGGGCTGCGGCGGCAGGTACCCCGCCACGGTGG 120
consensus_15350#1 ------------------------------------------------------------
consensus_15350#2 ------------------------------------------------------------
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 CGCGGCGGTGCTGCTGCGCCGTCCCGCGGTCGCGGCGGGGTCCCGCGCCGCGGCGGCGCC 180
consensus_15350#1 ------------------------------------------------------------
consensus_15350#2 --------------------------------------------ACGCACACAGCCGCAG 16
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 TGGGCCTGGCGGCGTCCAGGGCGGACGACTCGTCGCCCGCGCCGTTCGAGATGACGCTGG 240
consensus_15350#1 ----------------------------GTTAGATAGGATTAAAAACAAGTTGTCAGCCT 32
consensus_15350#2 CAGCAGCAGTCGCGC-ACACACAGAAGCCGAGGGCGCATCCTTCGACGACATCATGCGCG 75
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 AGGGCGCGCTGAAGCTGCTGGGCGTCGCCGAGGGCGCATCCTTCGACGACATCATGCGCG 300
consensus_15350#1 GGCCTGTAATTAACCGAGATGAGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCC 92
consensus_15350#2 CCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGC-----AGGT 130
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 CCAAGAACGCCGTCCTCGCATCCTGCAAGGACGACCAGGACGCCGTCGCGC-----AGGT 355
consensus_15350#1 TGAAGATGCCAGCAGCTGTGTATAGCAAACAATACATCGACGTCACTATCCTTTATACTT 152
consensus_15350#2 TGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGT 190
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 TGAGGCTGCCTATGACATGCTGCTTATGCAGAGCTTATCACAGCGAAGGGCTGGCAAGGT 415
consensus_15350#1 TAAAGATAACTTGTATCTAGTCTCTTTTCAGTCCAAATCTT-GCTCTTCCTTACTGAAAT 211
consensus_15350#2 TGTTGATAACAGCATCCGCTATGCTGACGTCAA-ACCTGTAAAAAGTGCAGGTTCAGGCA 249
consensus_15350#3 -----------------------------------------GAAGTAGTGGGATCC--CC 17
consensus_15350#0 TGTTGATAACAGCATCCGCTATGCTGACGTCAA-ACCTGTAAAAAGTGCAGGTTCAGGCA 474
consensus_15350#1 TGATTGTGG-AGCGTGTGGGTTGTGAGTTTCACTGTTTGACAGCAAAGTGGACTATTGAT 270
* * *
consensus_15350#2 CAGTACCA-CAGTGGATGCAAGCAACCATGAAGAACGCAC-CCGTGACATTTGA--GGCT 305
consensus_15350#3 CGGGGNTG-CAG-GAATTCGGGCACGAGGAANGAACGCAC-CCGTGACATTTGA--GGCT 72
consensus_15350#0 CAGTACCA-CAGTGGATGCAAGCAACCATGAAGAACGCAC-CCGTGACATTTGA--GGCT 530
consensus_15350#1 CCTTACAAGTGGTGAAGGGGGGCCACTGTGCTGATTGAAGATCTTGCAATCTGACCAACC 330
* * * * ** ** * * * ** ** *** *
consensus_15350#2 CCATCTTCGAGCAGCTTGGGTATC--CAATCATGCGTTTATGGTGCACTGATGGTTTTCA 363
consensus_15350#3 CCATCTTCGAGCAGCTTGGGTATC--CAATCATGCGTTTATGG-GCACTGATGGTTTTCA 129
consensus_15350#0 CCATCTTCGAGCAGCTTGGGTATC--CAATCATGCGTTTATGGTGCACTGATGGTTTTCA 588
consensus_15350#1 TTGGCATCAAACTTCGTATGCAGCTGCAGTTCTTTCAGTAGGTTGAACCTGCAAAATGTA 390
* ** * * * * * * * ** * * ** * * ** * *
consensus_15350#2 CTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTG 423
consensus_15350#3 CTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTGGCCCTGATGTGCCTG 189
consensus_15350#0 CTTATGCTAGTGGAAGCGCTACATCTTTACCATCAACATACACTAGCCCTGATGTGCCTG 648
consensus_15350#1 TTCTTTAGTTTATCAGAATTTCTGTCATCCAAGGATGGCCCAATATTCGTGGTGAAATTG 450
* * * ** * * * * * * ** * * ** ** **
consensus_15350#2 GATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGA 483
consensus_15350#3 GATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGA 249
consensus_15350#0 GATTTATCTTAGCAACAGGATTTGGTGCTTCATTGTATTTCCTGACAAAGAAAAATATGA 708
consensus_15350#1 GCAGATGCCACATGCCAGTATTTGG-ATTGCTTTGCATCTAGTCACTGATGACA-TCTGA 508
* * *** ****** * * *** ** * * ** * * * * ***
consensus_15350#2 ACTTAGGTA---AAGCGGCATTGATTACT-GTTGGGGGTCTTGCGGT-CGGTGCGACAGT 538
consensus_15350#3 ACTTAGGTA---AAGCGGCATTGATTACT-GTTGGGGGTCTTGCGGT-CGGTGCGACAGT 304
consensus_15350#0 ACTTAGGTA---AAGCGGCATTGATTACT-GTTGGGGGTCTTGCGGT-CGGTGCGACAGT 763
consensus_15350#1 ATGTGGATGCTTACAGGGGTTGGATTATTTGTTGTAGAACTCTAGTTTCCTTACCACCAA 568
* * * * * ** * ***** * **** * ** * * * * * **
consensus_15350#2 CGGATCTGCTGTGGA-GAATTGGCTACAGGTT-GATGT--TGTGCCCTTTCTAGGC-GTT 593
consensus_15350#3 CGGATCTGCTGTGGA-GAATTGGCTACAGGTT-GATGT--TGTGCCCTTTCTAGGC-GTT 359
consensus_15350#0 CGGATCTGCTGTGGA-GAATTGGCTACAGGTT-GATGT--TGTGCCCTTTCTAGGC-GTT 818
consensus_15350#1 CACAAACCTTATGAATGGTTTGGCAACATTCTAGATATCATGTATATATTCTACACTGTT 628
* * * ** * * ***** *** * *** * *** ***** * ***
consensus_15350#2 -----CACTCCCCTGCTGTTGTTGTCAGTGA----------------------------- 619
consensus_15350#3 -----CACTCCCCTGCTGTTGTTGTCAGTGA----------------------------- 385
consensus_15350#0 -----CACTCCCCTGCTGTTGTTGTCAGTGAATTTATTCTGTTCTCCCATTGTTGGTCTC 873
consensus_15350#1 TGTTGCAGTTTTTTTGTGCTATTACCAATTGAAGAAGTTTGGTCAGGTAATTT------- 681
** * * ** * ** ** *
consensus_15350#2 ------------------------------------------------------------
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 GCTGTTTGTTAGATAGGATTAAAAACAAGTTGTCAGCCTGGCCTGTAATTAACCGAGATG 933
consensus_15350#1 ------------------------------------------------------------
consensus_15350#2 ------------------------------------------------------------
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 AGCTAGCTCCGAAAAAGTCACGAAAATGCATCTTTCTCCTGAAGATGCCAGCAGCTGTGT 993
consensus_15350#1 ------------------------------------------------------------
consensus_15350#2 ------------------------------------------------------------
consensus_15350#3 ------------------------------------------------------------
consensus_15350#0 ATAGCAAACATACATCGACGTCACTATCCTTTATACTTTAAAGATAACTTGTATCTAGTC 1053
consensus_15350#1 ------------------------------------------------------------
consensus_15350#2 ---------------------------
consensus_15350#3 ---------------------------
consensus_15350#0 TCTTTTCAGTCCCAAAAAAAAAAAAAA 1080
consensus_15350#1 ---------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||