cluster # 1538

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1538 cluster # 1538 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1538#0 length = 989 sequences # 2

consensusID : consensus_1538#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 989
fasta sequence

                              [GGAGGCGATGTTCCGGTTCATGTCCAAGAACGCCGCCGTCGTATTATTCGCTGATCCCGAGGCGGCTGCGGCCGTACGTGACGGTGTCGTCGGCGGCGTCGGCGTGCAGCACGGACGTGGCGGCGGCGGCGAGCGGCGAGCACTCGTGGAACGACACGCTCGTCGTCCCCGTGGGCGCGGAGTTCCTCGAGAGCCGCGGCGGCGGCGGCGTGCACGTGGCGGTGTACTCGGAGCCGGCGTGCCGGCTCGTCGGCGGCGCCACGCCGCTGGGGTGGTGCAGGATCCCCGCCGCCGACGTGCTCGACGGCCTCCGCCCGCCGCGCGCGCTCCGCCGGCTCAGCTACTCCCTCCGCTGCCCGCGCACCGGCGGCCCCGCCCGCGGCGTCGTGCACCTCGCCGTCCGCGTCCTCGGCGACCTCGTCCCGCCGCCTCCGCCGCAGCATGCCCCGTCGACGCCGCCGGCGCAGCCAGGGTGGTGCCGCGTGGCGATGGGCATCCCGGTGTCGGGGACATCCGCCGCCGTGGTGGGGATGCCGGCGTGGGCGGCGTGGGGCGGCGAGGCGGCGGCGTCGCGGTGATCGATCGCGACGCGGCGAGGCAACGAGAGAGACTACCCGTGG-AAAAACGGTGGAAAAATTCATCGCCGGGTCGGACTTATTTTTATTTATTTTTTGTTCTGATCGAGACGTTGACTAACCCGGTAATGGGTTGGTCAAACGTCTCGTCGGCTCGTCGCGTTGTTCTGCGTGTGTACGTATATACGTACGTACATGCCCGGAAGCTTCCTCTCGCAGCTATACGTATGTACATACAACCCACGTACGTATAGTATCAATCATAAGTGGCTGTACTCGGATTGGTGGTGTATATGTGACTGAACTGTGGGACCAGGGGGTTGCAGGGGTTTTGTAATTGTAACTGTATAAATGATTGCTACCACTTGATTGTGAGATGAATTGATAAGAGAAACCCTAAGTCGAAAAAAAAAA]

[+] EMBL AK110551             [GGAGGCGATGTTCCGGTTCATGTCCAAGAACGCCGCCGTCGTATTATTCGCTGATCCCGAGGCGGCTGCGGCCGTACGTGACGGTGTCGTCGGCGGCGTCGGCGTGCAGCACGGACGTGGCGGCGGCGGCGAGCGGCGAGCACTCGTGGAACGACACGCTCGTCGTCCCCGTGGGCGCGGAGTTCCTCGAGAGCCGCGGCGGCGGCGGCGTGCACGTGGCGGTGTACTCGGAGCCGGCGTGCCGGCTCGTCGGCGGCGCCACGCCGCTGGGGTGGTGCAGGATCCCCGCCGCCGACGTGCTCGACGGCCTCCGCCCGCCGCGCGCGCTCCGCCGGCTCAGCTACTCCCTCCGCTGCCCGCGCACCGGCGGCCCCGCCCGCGGCGTCGTGCACCTCGCCGTCCGCGTCCTCGGCGACCTCGTCCCGCCGCCTCCGCCGCAGCATGCCCCGTCGACGCCGCCGGCGCAGCCAGGGTGGTGCCGCGTGGCGATGGGCATCCCGGTGTCGGGGACATCCGCCGCCGTGGTGGGGATGCCGGCGTGGGCGGCGTGGGGCGGCGAGGCGGCGGCGTCGCGGTGATCGATCGCGACGCGGCGAGGCAACGAGAGAGACTACCCGTGG AAAAACGGTGGAAAAATTCATCGCCGGGTCGGACTTATTTTTATTTATTTTTTGTTCTGATCGAGACGTTGACTAACCCGGTAATGGGTTGGTCAAACGTCTCGTCGGCTCGTCGCGTTGTTCTGCGTGTGTACGTATATACGTACGTACATGCCCGGAAGCTTCCTCTCGCAGCTATACGTATGTACATACAACCCACGTACGTATAGTATCAATCATAAGTGGCTGTACTCGGATTGGTGGTGTATATGTGACTGAACTGTGGGACCAGGGGGTTGCAGGGGTTTTGTAATTGTAACTGTATAAATGATTGCTACCACTTGATTGTGAGATGAATTGATAAGAGAAACCCTA               ]
[+] EMBL BI813357             [                                                                                                                                                                                                                                                                                                                                                                                                                     gtCTC GCGACCTCTTCCC CCGCCTCC CCCAAGCATGCCCCTTCGAC CC CCGGC CA CCAGGGT GT CCGCGT GCGATGGGCATCCC GT TCGGGGACATCC CC CCGTGGTGGGGAT CCGGCGT GGCGGCGTGGGGCGGCGAGGC GCGGCGTC CGGTGATCGATCGCGACGCGGCGAGGCAACGAGAGAGACTACCCGTGGAAAAAACGGTGGAAAAATTCATC CCGGGTCGGACTTATTTTTATTTATTTTTTGTTCTGATCGAGACGTTGACTAACCCGGTAATGGGTTGGTCAAACGTCTCGTCGGCTCGTCGCGTTGTTCTGCGTGTGTACGTATATACGTACGTACATGCCCGGAAGCTTCCTCTCGCAGCTATACGTATGTACATACAACCCACGTACGTATAGTATCAATCATAAGTGGCTGTACTCGGATTGGTGGTGTATATGTGACTGAACTGTGGGACCAGGGGGTTGCAGGGGTTTTGTAATTGTAACTGTATAAATGATTGCTACCACTTGATTGTGAGATGAATTGATAAGAGAAACCCTAAGTCGAAAAAAAAAA]




>consensus_1538#0
GGAGGCGATGTTCCGGTTCATGTCCAAGAACGCCGCCGTCGTATTATTCGCTGATCCCGA
GGCGGCTGCGGCCGTACGTGACGGTGTCGTCGGCGGCGTCGGCGTGCAGCACGGACGTGG
CGGCGGCGGCGAGCGGCGAGCACTCGTGGAACGACACGCTCGTCGTCCCCGTGGGCGCGG
AGTTCCTCGAGAGCCGCGGCGGCGGCGGCGTGCACGTGGCGGTGTACTCGGAGCCGGCGT
GCCGGCTCGTCGGCGGCGCCACGCCGCTGGGGTGGTGCAGGATCCCCGCCGCCGACGTGC
TCGACGGCCTCCGCCCGCCGCGCGCGCTCCGCCGGCTCAGCTACTCCCTCCGCTGCCCGC
GCACCGGCGGCCCCGCCCGCGGCGTCGTGCACCTCGCCGTCCGCGTCCTCGGCGACCTCG
TCCCGCCGCCTCCGCCGCAGCATGCCCCGTCGACGCCGCCGGCGCAGCCAGGGTGGTGCC
GCGTGGCGATGGGCATCCCGGTGTCGGGGACATCCGCCGCCGTGGTGGGGATGCCGGCGT
GGGCGGCGTGGGGCGGCGAGGCGGCGGCGTCGCGGTGATCGATCGCGACGCGGCGAGGCA
ACGAGAGAGACTACCCGTGGAAAAACGGTGGAAAAATTCATCGCCGGGTCGGACTTATTT
TTATTTATTTTTTGTTCTGATCGAGACGTTGACTAACCCGGTAATGGGTTGGTCAAACGT
CTCGTCGGCTCGTCGCGTTGTTCTGCGTGTGTACGTATATACGTACGTACATGCCCGGAA
GCTTCCTCTCGCAGCTATACGTATGTACATACAACCCACGTACGTATAGTATCAATCATA
AGTGGCTGTACTCGGATTGGTGGTGTATATGTGACTGAACTGTGGGACCAGGGGGTTGCA
GGGGTTTTGTAATTGTAACTGTATAAATGATTGCTACCACTTGATTGTGAGATGAATTGA
TAAGAGAAACCCTAAGTCGAAAAAAAAAA

clustalw multiple alignements is not computed in this case