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Oryza sativa
cluster # 15423 cluster # 15423       Sequences # 22       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_15423#0 length = 1498 sequences # 8  
consensus_15423#1 length = 894 sequences # 1  
consensus_15423#2 length = 861 sequences # 8  
consensus_15423#3 length = 761 sequences # 3  
consensus_15423#4 length = 744 sequences # 2  

consensusID : consensus_15423#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1498
fasta sequence
                              [AATCCCCGCGAGCTCAACCTCCTCCTCCGCCATGTCCGGCCTCCTCCGGTGGAGGCGCCTCGCCGCCGTGGCCACGCGGGCGGAGTCCACCCTGACCGCGCCGGAGTGCTGCTCCCCGGCGGTGGTGGCGCCGTCGCACCGGCGCGTGCAGGAACGGCGCAAGTGGGAGGGCCCCACCTCCTCCTCGTCGTCGTCGTCCGACGAGCACGAGCCGCGGCGCATCCGCGCGGAGGCGCACTGCCCGCGCTGCTCCAAGCACATGGACATCCTCTTCTCCCACCGAGCGCCGCCGTCCTCCTCCGCCGCCGCGGGCGCTGGCGCAGGCGGCGGTGGGTACCATGCGCTCAACCTCTGCCCCAACTGCCGCAGCGCCTACTTCTTCCGCCCCCACCTCCTCGCGCCGCTCCAGGGCACCTTCGTCGAGATCGGCCGCGTCCGCGCCGACCTGCTCCCCCACGACGCCGTCAGGGCCAGGGGCGCTTCCTTCTGGGAGGCCATCCGTGGGAGCTCGTCGTCGCGGGACGACGGGGACGGCGGCGGCGTGGCCGTGCACGTGCCGCCCGGCCCGCCGTTCCACCCCAACCTCAACGTCGTCCGCGTCGCCGGAGGCGGTGGCGGTGGCGGCGGCGGAGGAGGAGGAGGAGCAGGTGGTGGCGGTGGTGGTGAGGAGGGTGCGGGGAAGGACGGGTGGGGCGGGTCGAACCTCGGGAAGGATTTGCCTACGCCCAAGGAGATATGTCAGGGGCTCGATAAGTATGTGATTGGGCAGGACAGAGCCAAGAAGGTGCTATCTGTTGCAGTGTACAATCATTATAAACGAATATACCATAAATCATTACAAAAAGGGTCTGGAGCAGATTTGGGTGGTTTTGATGGAGAAGCTGATGATGACGATGGTGTTGAACTAGAGAAAAGCAATGTTCTATTAATGGGGCCTACTGGCTCAGGTAAAACTCTACTTGCTAAGACATTAGCTCGCTTTGTGAATGTGCCATTTGTAATTGCTGATGCAACAACATTGACACAGGCAGGGTATGTAGGAGAAGATGTAGAATCTATACTATACAAGTTACTGGCGGTGGCAGATTTTAACGTGCAAGCAGCACAACAAGGGATGGTGTACATCGATGAAGTTGATAAGATCACAAAGAAGGCTGAGAGCCTTAACATTAGTAGAGATGTCTCCGGTGAAGGTGTCCAGCAGGCTTTGTTGAAAATGCTGGAAGGCACAATTGTCAATGTCCCTGAGAAAGGAGCAAGGAAGCATCCTCGCGGTGATAATATACAGATAGATACAAAGGACATTCTTTTTATTTGTGGTGGTGCTTTTATTGACTTGGAGAAAACTATATCAGAGAGGCGGCAAGATTCTTCTATTGGCTTTGGGGCACCTGTCCGTGCTAACATGAGGGCAGGTGGCATCTCAAGTGCTCAAGTGACATCATCCTTGTTGGAATCAGTTGAGAGTGGCGACCTAATAGCATATGGACTTATTCCG]

[+] EMBL CB636686             [AATCCCCGCGAGCTCAACCTCCTCCTCCGCCATGTCCGGCCTCCTCCGGTGGAGGCGCCTCGCCGCCGTGGCCACGCGGGCGGAGTCCACCCTGACCGCGCCGGAGTGCTGCTCCCCGGCGGTGGTGGCGCCGTCGCACCGGCGCGTGCAGGAACGGCGCAAGTGGGAGGGCCCCACCTCCTCCTCGTCGTCGTCGTCCGACGAGCACGAGCCGCGGCGCATCCGCGCGGAGGCGCACTGCCCGCGCTGCTCCAAGCACATGGACATCCTCTTCTCCCACCGAGCGCCGCCGTCCTCCTCCGCCGCCGCGGGCGCTGGCGCAGGCGGCGGTGGGTACCATGCGCTCAACCTCTGCCCAAACTGCCGCAACGCCTACTTCTTCCGCCCCCACCTac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB684510             [     gCGCGAGCTCAACCTCCTCCTCCGCCATGTCCGGCCTCCTCCGGTGGAGGCGCCTCGCCGCCGTGGCCACGCGGGCGGCGTCCACCCTGACCGCGCCGGAGTGCTGCTCCCCGGCGGTGGTGGCGCCGCCGCACCGGCGCGTGCAGGAACGGCGCAAGTGGGAGGGCCCCACCTCCTCCTCGTCGTCGTCGTCCGACGAGCACGAGCCGCGGCGCATCCGCGCGGAGGCGCACTGCCCGCGCTGCTCCAAGCACATGGACATCCTCTTCTCCCACCGCGCGCCGCCGTCCTCCTCCGCCGCCGCGGGCGCGGGCGCGGGCGGCGGTGGGTACCAGGCGCTCAACCTCTGCCCCAACTGCCGCAGCGCCTACTTCTTCCGCCCCCACCTCCTCGCGCCGCTCCAGGGCACCTTCGTCGAGATCGGCCGCGTCCGCGCCGACCTGCTCCCCCACGACGCCGTCAGGGCCAGGGGCGCTTCCTTCTGGGAGGCCATCCGTGGGAGCTCGTCGTCGCGGGACGACGGGGACGGCGGCGGCGTGGCCGTGCACGTGCCGCCCGGCCCGCCGTTCCACCCCAACCTCAACGTCGTCCGCGTCGCCGGAGGCGGTGGCGGTGGCGGCGGCGGATGAGGAGGAGGAGCACGTGGTGGCGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB618122             [                                                                                                                                                                                                                                                                                                                                                           ACCTCTCCTTCAACTGCCGCAGCGCCTACTTCTTCCGCCCCCACCTCCTCGCGCCGCTCCAGGGCACCTTCGTCGAGATCGGCCGCGTCCGCGCCGACCTGCTCCCCCACGACGCCGTCAGGGCCAGGGGCGCTTCCTTCTGGGAGGCCATCCGTGGGAGCTCGTCGTCGCGGGACGACGGGGACGGCGGCGGCGTGGCCGTGCACGTGCCGCCCGGCCCGCCGTTCCACCCCAACCTCAACGTCGTCCGCGTCGCCGGAGGCGGTGGCGGTGGCGGCGGCGGAGGAGGAGGAGGAGCAGGTGGTGGCGGTGGTGGTGAGGAGGGTGCGGGGAAGGACGGGTGGGGCGGGTCGAACCTCGGGAAGGATTTGCCTACGCCCAAGGAGATATGTCAGGGGCTCGATAAGTATGTGATTGGGCAGGACAGAGCCAAGAAGGTGCTATCTGTTGCAGTGTACAATCATTATAAACGAATATACCATAAATCATTACAAAAAGGGTCTGGAGCAGATTTGGGTGGTTTTGATGGAGAAGCTGATGATGACGATGGTGTTGAACTAGAGAAAAGCAATGTTCTATTAATGGGGCCTACTGGCTCAGGTAAAACTCTACTTGCTAAGACATTAGCTCGCTTTGTGAATGTGCCATTTGTAATTGCTGATGCAACAACATTGACACAGGCAGGGTATGTAGGAGAAGATGTAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB617856             [                                                                                                                                                                                                                                                                                                                                                           ACCTCTGCCCCAACTGCCGCAGCGCCTACTTCTTCCGCCCCCACCTCCTCGCGCCGCTCCAGGGCACCTTCGTCGAGATCGGCCGCGTCCGCGCCGACCTGCTCCCCCACGACGCCGTCAGGGCCAGGGGCGCTTCCTTCTGGGAGGCCATCCGTGGGAGCTCGTCGTCGCGGGACGACGGGGACGGCGGCGGCGTGGCCGTGCACGTGCCGCCCGGCCCGCCGTTCCACCCCAACCTCAACGTCGTCCGCGTCGCCGGAGGCGGTGGCGGTGGCGGCGGCGGAGGAGGAGGAGGAGCAGGTGGTGGCGGTGGTGGTGAGGAGGGTGCGGGGAAGGACGGGTGGGGCGGGTCGAACCTCGGGAAGGATTTGCCTACGCCCAAGGAGATATGTCAGGGGCTCGATAAGGATGTGATTGGGCAGGACAGAGCCAAGAAGGTGCTATCTGTTGCAGTGTACAATCATTATAAACGAATATACCATAAATCATTACAAAAAGGGTCTGGAGCAGATTTGGGTGGTTTTGATGGAGAAGCTGATGATGACGATGGTGTTGAACTAGAGAAAAGCAATGTTCTATTAATGGGGCCTACTGGCTCATGTAAAACTCTACTTGCTAAGACATTAGCTCGCTTTGTGAATGTGCCATTTGTAATTGCTGATGCAACAACATTGACACTGGCAGGGTATGTAGGAGAAGATGTAGAATCTATACTATACAAGTTACT                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB617783             [                                                                                                                                                                                                                                                                                                                                                           ACCTCTCCTTCAACTGCCGCAGCGCCTACTTCTTCCGCCCCCACCTCCTCGCGCCGCTCCAGGGCACCTTCGTCGAGATCGGCCGCGTCCGCGCCGACCTGCTCCCCCACGACGCCGTCAGGGCCAGGGGCGCTTCCTTCTGGGAGGCCATCCGTGGGAGCTCGTCGTCGCGGGACGACGGGGACGGCGGCGGCGTGGCCGTGCACGTGCCGCCCGGCCCGCCGTTCCACCCCAACCTCAACGTCGTCCGCGTCGCCGGAGGCGGTGGCGGTGGCGGCGGCGGAGGAGGAGGAGGAGCAGGTGGTGGCGGTGGTGGTGAGGAGGGTGCGGGGAAGGACGGGTGGGGCGGGTCGAACCTCGGGAAGGATTTGCCTACGCCCAATGAGATATGTCAGGGGCTCCATAAGTATGCGATTGGGCAGGACAGAACCAAGAAGGTGCTATCTGTTGCGGGGGACAATCATTATAAACGAATATACCATAAATCCTTACCAAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB628551             [                                                                                                                                                                                                                                                                                                                                                                                      ACTTCTTCCGCCCCCACCTCCTCGCGCCGCTCCAGGGCACCTTCGTCGAGATCGGCCGCGTCCGCGCCGACCTGCTCCCCCACGACGCCGTCAGGGCCAGGGGCGCTTCCTTCTGGGAGGCCATCCGTGGGAGCTCGTCGTCGCGGGACGACGGGGACGGCGGCGGCGTGGCCGTGCACGTGCCGCCCGGCCCGCCGTTCCACCCCAACCTCAACGTCGTCCGCGTCGCCGGAGGCGGTGGCGGTGGCGGCGGCGGAGGAGGAGGAGGAGCAGGTGGTGGCGGTGGTGGTGAGGAGGGTGCGGGGAAGGACGGGTGGGGCGGGTCGAACCTCGGGAAGGATTTGCCTACGCCCAAGGAGATATGTCAGGGGCTCGATAAGTATGTGATTGGGCAGGACAGAGCCAAGAAGGTGCTATCTGTTGCAGTGTACAATCATTATAAACGAATATACCATAAATCATTACAAAAAGGGTCTGGAGCAGATTTGGGTGGTTTTGATGGAGAAGCTGATGATGACGATGGTGTTGAACTAGAGAAAAGCAATGTTCTATTAATGGGGCCTACTGGCTCAGGTAAAACTCTACTTGCTAAGACATTAGCTCGCTTTGTGAATGTGCCATTTGTAATTGCTGATGCAACAACATTGACACAGGCAGGGTATGTATGAGAAGATGTATAATCTATACTATACAAGTTACTGGCGGTGGCAGATTTTAACGTGCAAGCAGCACAACAAGGGATGGTGTACATCG                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB617934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTGCGGCGAAGGACGGGTGGGGCGGGTCGAACCTCGGGAAGGATTTGCCTACGCCCAAGGAGATATGTCAGGGGCTCGATAAGTATGTGATTGGGCAGGACAGAGCCAAGAAGGTGCTATCTGTTGCAGTGTACAATCATTATAAACGAATATACCATAAATCATTACAAAAAGGGTCTGGAGCAGATTTGGGTGGTTTTGATGGAGAAGCTGATGATGACGATGGTGTTGAACTAGAGAAAAGCAATGTTCTATTAATGGGGCCTACTGGCTCAGGTAAAACTCTACTTGCTAAGACATTAGCTCGCTTTGTGAATGTGCCATTTGTAATTGCTGATGCAACAACATTGACACAGGCAGGGTATGTAGGAGAAGATGTAGAATCTATACTATACAAGTTACTGGCGGTGGCAGATTTTAACGTGCAAGCAGCACAACAAGGGATGGTGTACATCGATGAAGTTGATAAGATCACAAAGAAGGCTGAGAGCCTTAACATTAGTAGAGATGTCTCCGGTGAAGGTGTCCAGCAGGCTTTGTTGAAAATGCTGGAAGGCACAATTGTCAATGTCCCTGAGAAAGGAGCAAGGAAGCATCCTCGCGGTGATAATATACAGATAGATACAAAGGACATTCTTTTTATTTGTGGTGGTGCTTTTATTGACTTGGAGAAAACTATATCAGAGAGGCGGCAAGATTCTTCTATTGGCTTTGGGGCACCTGTCCGTGCTAACATGAGGGCAGGTGGCATCTCAAGTGCTCAAGTGACATCATC                                                    ]
[+] EMBL CB618170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTGCGGGGAAGGACGGGTGGGGCGGGTCGAACCTCGGGAAGGATTTGCCTACGCCCAAGGAGATATGTCAGGGGCTCGATAAGTATGTGATTGGGCAGGACAGAGCCAAGAAGGTGCTATCTGTTGCAGTGTACAATCATTATAAACGAATATACCATAAATCATTACAAAAAGGGTCTGGAGCAGATTTGGGTGGTTTTGATGGAGAAGCTGATGATGACGATGGTGTTGAACTAGAGAAAAGCAATGTTCTATTAATGGGGCCTACTGGCTCAGGTAAAACTCTACTTGCTAAGACATTAGCTCGCTTTGTGAATGTGCCATTTGTAATTGCTGATGCAACAACATTGACACAGGCAGGGTATGTAGGAGAAGATGTAGAATCTATACTATACAAGTTACTGGCGGTGGCAGATTTTAACGTGCAAGCAGCACAACAAGGGATGGTGTACATCGATGAAGTTGATAAGATCACAAAGAAGGCTGAGAGCCTTAACATTAGTAGAGATGTCTCCGGTGAAGGTGTCCAGCAGGCTTTGTTGAAAATGCTGGAAGGCACAATTGTCAATGTCCCTGAGAAAGGAGCAAGGAAGCATCCTCGCGGTGATAATATACAGATAGATACAAAGGACATTCTTTTTATTTGTGGTGGTGCTTTTATTGACTTGGAGAAAACTATATCAGAGAGGCGGCAAGATTCTTCTATTGGCTTTGGGGCACCTGTCCGTGCTAACATGAGGGCAGGTGGCATCTCAAGTGCTCAAGTGACATCATCCTTGTTGGAATCAGTTGAGAGTGGCGACCTAATAGCATATGGACTTATTCCG]


>consensus_15423#0 AATCCCCGCGAGCTCAACCTCCTCCTCCGCCATGTCCGGCCTCCTCCGGTGGAGGCGCCT CGCCGCCGTGGCCACGCGGGCGGAGTCCACCCTGACCGCGCCGGAGTGCTGCTCCCCGGC GGTGGTGGCGCCGTCGCACCGGCGCGTGCAGGAACGGCGCAAGTGGGAGGGCCCCACCTC CTCCTCGTCGTCGTCGTCCGACGAGCACGAGCCGCGGCGCATCCGCGCGGAGGCGCACTG CCCGCGCTGCTCCAAGCACATGGACATCCTCTTCTCCCACCGAGCGCCGCCGTCCTCCTC CGCCGCCGCGGGCGCTGGCGCAGGCGGCGGTGGGTACCATGCGCTCAACCTCTGCCCCAA CTGCCGCAGCGCCTACTTCTTCCGCCCCCACCTCCTCGCGCCGCTCCAGGGCACCTTCGT CGAGATCGGCCGCGTCCGCGCCGACCTGCTCCCCCACGACGCCGTCAGGGCCAGGGGCGC TTCCTTCTGGGAGGCCATCCGTGGGAGCTCGTCGTCGCGGGACGACGGGGACGGCGGCGG CGTGGCCGTGCACGTGCCGCCCGGCCCGCCGTTCCACCCCAACCTCAACGTCGTCCGCGT CGCCGGAGGCGGTGGCGGTGGCGGCGGCGGAGGAGGAGGAGGAGCAGGTGGTGGCGGTGG TGGTGAGGAGGGTGCGGGGAAGGACGGGTGGGGCGGGTCGAACCTCGGGAAGGATTTGCC TACGCCCAAGGAGATATGTCAGGGGCTCGATAAGTATGTGATTGGGCAGGACAGAGCCAA GAAGGTGCTATCTGTTGCAGTGTACAATCATTATAAACGAATATACCATAAATCATTACA AAAAGGGTCTGGAGCAGATTTGGGTGGTTTTGATGGAGAAGCTGATGATGACGATGGTGT TGAACTAGAGAAAAGCAATGTTCTATTAATGGGGCCTACTGGCTCAGGTAAAACTCTACT TGCTAAGACATTAGCTCGCTTTGTGAATGTGCCATTTGTAATTGCTGATGCAACAACATT GACACAGGCAGGGTATGTAGGAGAAGATGTAGAATCTATACTATACAAGTTACTGGCGGT GGCAGATTTTAACGTGCAAGCAGCACAACAAGGGATGGTGTACATCGATGAAGTTGATAA GATCACAAAGAAGGCTGAGAGCCTTAACATTAGTAGAGATGTCTCCGGTGAAGGTGTCCA GCAGGCTTTGTTGAAAATGCTGGAAGGCACAATTGTCAATGTCCCTGAGAAAGGAGCAAG GAAGCATCCTCGCGGTGATAATATACAGATAGATACAAAGGACATTCTTTTTATTTGTGG TGGTGCTTTTATTGACTTGGAGAAAACTATATCAGAGAGGCGGCAAGATTCTTCTATTGG CTTTGGGGCACCTGTCCGTGCTAACATGAGGGCAGGTGGCATCTCAAGTGCTCAAGTGAC ATCATCCTTGTTGGAATCAGTTGAGAGTGGCGACCTAATAGCATATGGACTTATTCCG



consensusID : consensus_15423#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 894
fasta sequence
                              [ACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTATTGGCATTTCCTTCCCCCTTTCAATGCGTTTCATTGTTTCTAAGTTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGTTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGAAACGTTCAAAAGCACAATCGCCATATAGGATCTTAGCTCGCAANCCAGTTGGTCACTGCTCCGACTGGTNTTATCTACAACACCGATTATTCCTTCTAACCGATTTTGATCTGAAACTCTACATACATCATAGAATAATCTCAGGAATCCTTAAACACGGCACCCCATTTTGCATCGCTCTCTGCAATATTATAGCCCCCTAAAAGACCTCCCTTTCTTCTATATTTTTATTGTTCCCACATTTTTTCTTAAAAACAAAAAGCTCTTTATGCCCCAAAAAGGAAAACCAAATACGAAATTTCTTGTCCCCTTTTCCAGATATTCACAACCCCCTACCCGCCCCCCCCCCCCCCTATTTTTTTTTNAAAAAAANNNNNNNNNNNNNNNAAAAAAAAAAAAANNNNNNNNNNNNNNNNTTAATAATTTTAAATTATTTATC]

[+] EMBL AW155508             [ACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTATTGGCATTTCCTTCCCCCTTTCAATGCGTTTCATTGTTTCTAAGTTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGTTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGAAACGTTCAAAAGCACAATCGCCATATAGGATCTTAGCTCGCAANCCAGTTGGTCACTGCTCCGACTGGTNTTATCTACAACACCGATTATTCCTTCTAACCGATTTTGATCTGAAACTCTACATACATCATAGAATAATCTCAGGAATCCTTAAACACGGCACCCCATTTTGCATCGCTCTCTGCAATATTATAGCCCCCTAAAAGACCTCCCTTTCTTCTATATTTTTATTGTTCCCACATTTTTTCTTAAAAACAAAAAGCTCTTTATGCCCCAAAAAGGAAAACCAAATACGAAATTTCTTGTCCCCTTTTCCAGATATTCACAACCCCCTACCCGCCCCCCCCCCCCCCTATTTTTTTTTNAAAAAAANNNNNNNNNNNNNNNAAAAAAAAAAAAANNNNNNNNNNNNNNNNTTAATAATTTTAAATTATTTATC]


>consensus_15423#1 ACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTATTGGCATTTCCTTCCCCCTTTCAATG CGTTTCATTGTTTCTAAGTTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTTGGAC ATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTA TATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGC GCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATA CTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAA TAAATCACATCCCCATGGTTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTC CCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGAAACGTTCAAAAGCACAATCGCCATA TAGGATCTTAGCTCGCAANCCAGTTGGTCACTGCTCCGACTGGTNTTATCTACAACACCG ATTATTCCTTCTAACCGATTTTGATCTGAAACTCTACATACATCATAGAATAATCTCAGG AATCCTTAAACACGGCACCCCATTTTGCATCGCTCTCTGCAATATTATAGCCCCCTAAAA GACCTCCCTTTCTTCTATATTTTTATTGTTCCCACATTTTTTCTTAAAAACAAAAAGCTC TTTATGCCCCAAAAAGGAAAACCAAATACGAAATTTCTTGTCCCCTTTTCCAGATATTCA CAACCCCCTACCCGCCCCCCCCCCCCCCTATTTTTTTTTNAAAAAAANNNNNNNNNNNNN NNAAAAAAAAAAAAANNNNNNNNNNNNNNNNTTAATAATTTTAAATTATTTATC



consensusID : consensus_15423#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 861
fasta sequence
                              [GGGTCCGGGCCCCCCCAC-GCATTATTGGCC-TTCCTT-CCCC-TTTCAATGCGTTTCATTGTTTCTAAG-TTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTGCCAAGCTAACAAGGATAGG-AAACCGTCCAATAAATTCCGGAATAAGTCCATATGCTATTAGGTCGCCACTCTCAA]

[+] EMBL CB617857             [GGGTCCGGGCCCCCCCAC GCATTATTGGCC TTCCTT CCCC TTTCAATGCGTTTCATTGTTTCTAAG TTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTGCCAAGCTAACAAGGATAGG AAACCGTCCAATAAATTCCGGAATAAGTCCATATGCTATTAGGTCGCCACT     ]
[+] EMBL CB617784             [GGGTCCGGGCCCCCCCACAGCATTATTGGCC TT TTT CCCC TTTC ATGCGTTTCATTGTTTCTAAG TTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTGCCAAGCTAACAAGGATAGGAAAACCGT CAATAAATTCCGGAATAAGTCCATATGCTATTAGGTCGCC        ]
[-] EMBL CA767606             [                   GCATTATTGGCA TTCCTTNCCCCNTTNCAATGCGTTTCATTGTTTCTAAGTTTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCTGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCccccttgt                                                                                                                           ]
[+] EMBL CB618123             [                       TATTGGCCTTTCCTTCCCCC TTTCAATGCGTTTCATTGTTTCTAAG TTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTGCCAAGCTAACAAGGATAGG AAACCGTCCAATAAATTCCGGAATAAGTCCATATGCTATTANGTCGCCA       ]
[+] EMBL CB625981             [                                                 tctttTTTGATTGGTTCTAAG TTTTTTTTTTACATCCATCACCATTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTGCCAAGCTAACAAGGATAGG AAACCGTCCAATAAATTCCGGAATAAGTCCAT                        ]
[+] EMBL CB684511             [                                                               TTCGAAG TTGTTTTTTTACATCCATCGGCAGTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGGTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACGAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAG                                                                               ]
[+] EMBL CB617935             [                                                                                    TCCATCACCCTTAAAGACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTGCCAAGCTAACAAGGATAGG AAACCGTCCAATAAATTCCGGAATAAGTCCATATGCTATTAGGTCGCCACTCTCAA]
[+] EMBL CB628552             [                                                                                          AGCAGTCATCACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTGCCAAGCTAACAAGGATAGG AAACCGTCCAATAAATTCCGGAATAAGTCCATATGCTATTAGGTCGCCACT     ]


>consensus_15423#2 GGGTCCGGGCCCCCCCACGCATTATTGGCCTTCCTTCCCCTTTCAATGCGTTTCATTGTT TCTAAGTTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTTGGACATTACATTTTCA TGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACTCTTTCC AAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTTT TTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTA CATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCC CCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCC CTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAG CTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGA TTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCT CAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTA TTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGA ATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTA GAGCTGCCAAGCTAACAAGGATAGGAAACCGTCCAATAAATTCCGGAATAAGTCCATATG CTATTAGGTCGCCACTCTCAA



consensusID : consensus_15423#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 761
fasta sequence
                              [TTTTTTCAGTCCTGTAAAATTCCAGATTTTCCTCTGCCTTTCCAAAATGGGCTCCACTATCACGTAAACACTGAACAACACCAATATTTGACAACAGCATTA-TGGCATTTCCTTCCCCCTTTCAA-TGCGTTTCATTGTTTCTAAGTTTTTTTTTTACATCCATCAGCAGTCATCACAATTCT-TGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACGTCGTTTCCAAACCCGTGCTGCAAATTAAGGTAAAGAGCGGTGGGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCTGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATC]

[-] EMBL BI812922             [TTTTTTCAGTCCTGTAAAATTCCAGATTTTCCTCTGCCTTTCCAAAATGGGCTCCACTATCACGTAAACACTGAACAACACCAACATTTGACAACAGCATTA TGGCATTTCCTTCCCCCTTTCAAGTGCGTTTCATTGTTTCTAAGTTTTTTTTTTACATCCATCAGCAGTCATCACAATTCTGTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATACGTCGTTTCCAAACCCGTGCTGCAAATTAAGGTAAAGAGCGGTGGGGGGTGCTGAACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA762917             [                                                                              tttttttcTTTGACAACAGCATTATTGGCATTTCCTTCCCCCTTTCAA TGCGTTTCATTGTTTCTAAGTTTTTTTTTTACATCCATCAGCAGTCATCACAATTCT TGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCTGAGCTATATAC TC TTTCCAAACCC TGCTGCAAATTAA GTAAAGAGC GT GGGGGTGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCTGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATC]
[-] EMBL BQ906125             [                                                                                    ttTTTGACAACAGCATTA TGGCATTNCCNTCCCCCTTTCAA TGCGTTTCATTGTTTCTAAGTTTTTTTTTTACATCCATCAGCAGTCATCACAATTCT TGGACATTACATTTTCATGACAACCA GGTTGTCTGTACGcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_15423#3 TTTTTTCAGTCCTGTAAAATTCCAGATTTTCCTCTGCCTTTCCAAAATGGGCTCCACTAT CACGTAAACACTGAACAACACCAATATTTGACAACAGCATTATGGCATTTCCTTCCCCCT TTCAATGCGTTTCATTGTTTCTAAGTTTTTTTTTTACATCCATCAGCAGTCATCACAATT CTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCC TGAGCTATATACGTCGTTTCCAAACCCGTGCTGCAAATTAAGGTAAAGAGCGGTGGGGGG TGCTGAACATTGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTT TACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAG ATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCA TCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAA GCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCG TCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCTGATTTTGCATCTGGAATCTCG TACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTT TTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATC



consensusID : consensus_15423#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 744
fasta sequence
                              [TCCTTTTAAGGTGTTTCTAAGTTTTTTTTTTACATCCATCAGCCTTCAATACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCCGAAATATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTT-TTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTGCCA]

[+] EMBL CB618171             [TCCTTTTAAGGTGTTTCTAAGTTTTTTTTTTACATCCATCAGCCTTCAATACAATTCTTGGACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCCGAAATATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACATTGCGCTGGAGCCTT TTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTGCCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGCTGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTGCCA]
[-] EMBL BQ908983             [                                                                                                                                                                      ttttTGCTGAACATTGCGCTGGAGCCTTNTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGG TAATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAACCAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTACAACCACCG ATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCATCCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGT                                                                                                                                                                      ]


>consensus_15423#4 TCCTTTTAAGGTGTTTCTAAGTTTTTTTTTTACATCCATCAGCCTTCAATACAATTCTTG GACATTACATTTTCATGACAACCAGGGTTGTCTGTACGACACCCATAAATATCCCCCGAA ATATATACTCTTTCCAAACCCTGCTGCAAATTAAGTAAAGAGCGTGGGGGTGCTGAACAT TGCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAGGCTA ATACTTACATTATTACATCTGGGATTAGATTTTACAGGGTTATACAGGAGATGTGAGAAC CAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATCCGCTTCGC TTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGCACCATCGC CATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTCTTCATCTA CAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTACATAGCAT CCATGAGAATATTCTCAAGGATAGTCCTTAAACCACGTGCACCCGTATTTTTGGACATTG CCTTCTTGGCAATTATTCTAAGTGCAGCATCTGTAAAATGAAGCTTGACATTATTCATGC TGAATAATTTCTTGAATTGTTTACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAA GCTGGTCCTCGTTTAGAGCTGCCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15423#2      ------------------------------------------------------------
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      ------------------------------------------------------------
consensus_15423#0      AATCCCCGCGAGCTCAACCTCCTCCTCCGCCATGTCCGGCCTCCTCCGGTGGAGGCGCCT 60
                                                                                   

consensus_15423#2      ------------------------------------------------------------
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      ------------------------------------------------------------
consensus_15423#0      CGCCGCCGTGGCCACGCGGGCGGAGTCCACCCTGACCGCGCCGGAGTGCTGCTCCCCGGC 120
                                                                                   

consensus_15423#2      ------------------------------------------------------------
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      ------------------------------------------------------------
consensus_15423#0      GGTGGTGGCGCCGTCGCACCGGCGCGTGCAGGAACGGCGCAAGTGGGAGGGCCCCACCTC 180
                                                                                   

consensus_15423#2      ------------------------------------------------------------
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      ------------------------------------------------------------
consensus_15423#0      CTCCTCGTCGTCGTCGTCCGACGAGCACGAGCCGCGGCGCATCCGCGCGGAGGCGCACTG 240
                                                                                   

consensus_15423#2      ------------------------------------------------------------
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      ------------------------------------------------------------
consensus_15423#0      CCCGCGCTGCTCCAAGCACATGGACATCCTCTTCTCCCACCGAGCGCCGCCGTCCTCCTC 300
                                                                                   

consensus_15423#2      ------------------------------------------------------------
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      ---------------------------------TTTTTTCAGTCCTGTAAAATTCCAGAT 27
consensus_15423#1      ------------------------------------------------------------
consensus_15423#0      CGCCGCCGCGGGCGCTGGCGCAGGCGGCGGTGGGTACCATGCGCTCAACCTCTGCCCCAA 360
                                                                                   

consensus_15423#2      --------------------------------------------------GGGTCCGGGC 10
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      TTTCCTCTGCCTTTCCAAAATGGGCTCCACTATCACGTAAACACTGAACAACACCAATAT 87
consensus_15423#1      ----------------------------------------ACTAGTCTCGAGTTTTTTTT 20
consensus_15423#0      CTGCCGCAGCGCCTACTTCTTCCGCCCCCACCTCCTCGCGCCGCTCCAGGGCACCTTCGT 420
                                                                                   

consensus_15423#2      CCCCCCAC-GCATTATTGGCCTT-CCTTCCCC-TTTCAATGCGTTTCATTGTTTCTAAGT 67
consensus_15423#4      -----------------------------TCC-TTTTAAGG--------TGTTTCTAAGT 22
consensus_15423#3      TTGACAACAGCATTATGGCATTT-CCTTCCCCCTTTCAATGCGTTTCATTGTTTCTAAGT 146
consensus_15423#1      TTTTTTTTTTTTTATTGGCATTT-CCTTCCCCCTTTCAATGCGTTTCATTGTTTCTAAGT 79
consensus_15423#0      CGAGATCGGCCGCGTCCGCGCCGACCTGCTCCCCCACGACGC-CGTCAGGGCCAGGGGCG 479
                                                     **      * *         *         

consensus_15423#2      TTTTTTTTTA------CATCCATCAGCAGTCATCACAATTCTTGGACATT-ACATTTTCA 120
consensus_15423#4      TTTTTTTTTA------CATCCATCAGCCTTCAATACAATTCTTGGACATT-ACATTTTCA 75
consensus_15423#3      TTTTTTTTTA------CATCCATCAGCAGTCATCACAATTCTTGGACATT-ACATTTTCA 199
consensus_15423#1      TTTTTTTTTA------CATCCATCAGCAGTCATCACAATTCTTGGACATT-ACATTTTCA 132
consensus_15423#0      CTTCCTTCTGGGAGGCCATCCGTGGGAGCTCGTCGTCGCGGGACGACGGGGACGGCGGCG 539
                        **  ** *       ***** *  *   **             ***    **     * 

consensus_15423#2      TGACAACCAGGGTTGT-CTGTACGACACCCATAAATATCCC---CTGAGCTATATACTC- 175
consensus_15423#4      TGACAACCAGGGTTGT-CTGTACGACACCCATAAATATCCC---CCGAAATATATACTC- 130
consensus_15423#3      TGACAACCAGGGTTGT-CTGTACGACACCCATAAATATCCC---CTGAGCTATATACGTC 255
consensus_15423#1      TGACAACCAGGGTTGT-CTGTACGACACCCATAAATATCCC---CTGAGCTATATACTC- 187
consensus_15423#0      GCGTGGCCGTGCACGTGCCGCCCGGCCCGCCGTTCCACCCCAACCTCAACGTCGTCCGCG 599
                             **  *   ** * *  ** * * *      * ***   *  *      * *   

consensus_15423#2      -TTTCCAAACCC-TGCTGCAAATTAAG-TAAAGAGCGT--GGG----GGTGCTGAACATT 226
consensus_15423#4      -TTTCCAAACCC-TGCTGCAAATTAAG-TAAAGAGCGT--GGG----GGTGCTGAACATT 181
consensus_15423#3      GTTTCCAAACCCGTGCTGCAAATTAAGGTAAAGAGCGGTGGGG----GGTGCTGAACATT 311
consensus_15423#1      -TTTCCAAACCC-TGCTGCAAATTAAG-TAAAGAGCGT--GGG----GGTGCTGAACATT 238
consensus_15423#0      TCGCCGGAGGCGGTGGCGGTGGCGGCGGCGGAGGAGGAGGAGGAGCAGGTGGTGGCGGTG 659
                           *  *  *  **  *        *    **   *    **    **** **    * 

consensus_15423#2      GCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAG---GC 283
consensus_15423#4      GCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAG---GC 238
consensus_15423#3      GCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAG---GC 368
consensus_15423#1      GCGCTGGAGCCTTTTTAACTAGCAATAGACACTACACACAATATTCCTTTACAAG---GC 295
consensus_15423#0      GTGGTGAGGAGGGTGCGGGGAAGGACGGGTGGGGCGGGTCGAACCTCGGGAAGGATTTGC 719
                       * * **  *    *      *   *  *      *       *   *   *       **

consensus_15423#2      TAATACTTACATTATTACATCTGGGATTAGATTT-TACAGGGTTATACAGGA--GATGTG 340
consensus_15423#4      TAATACTTACATTATTACATCTGGGATTAGATTT-TACAGGGTTATACAGGA--GATGTG 295
consensus_15423#3      TAATACTTACATTATTACATCTGGGATTAGATTT-TACAGGGTTATACAGGA--GATGTG 425
consensus_15423#1      TAATACTTACATTATTACATCTGGGATTAGATTT-TACAGGGTTATACAGGA--GATGTG 352
consensus_15423#0      CTACGCCCAAGGAGATATGTCAGGGGCTCGATAAGTATGTGATTGGGCAGGACAGAGCCA 779
                         *  *  *      **  ** ***  * ***   **   * **   *****  **    

consensus_15423#2      AGAAC---CAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATC 397
consensus_15423#4      AGAAC---CAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATC 352
consensus_15423#3      AGAAC---CAATAAATCACATCCCCATGGCTCTTGAAGAGGAAAGCTCGGCTTCTCCATC 482
consensus_15423#1      AGAAC---CAATAAATCACATCCCCATGGTTCTTGAAGAGGAAAGCTCGGCTTCTCCATC 409
consensus_15423#0      AGAAGGTGCTATCTGTTGCAGTGT-ACAATCATTATAAACGAATATACCATAAATCATTA 838
                       ****    * **   *  **     *      **  * * ***    *      **  * 

consensus_15423#2      CGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGC 457
consensus_15423#4      CGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGC 412
consensus_15423#3      CGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGATAACGTTCAAAAGC 542
consensus_15423#1      CGCTTCGCTTCCCGCTGCATCCCCTGCTACCTTTATCTGGGAGAGA-AACGTTCAAAAGC 468
consensus_15423#0      CAAAAAGGGTCTGGA-GCAGATTTGGGTGGTTTTGA-TGGAGAAGCTGATGAT-GACGAT 895
                       *     *  **  *  ***      * *   ***   ***   **   * * *  *    

consensus_15423#2      ACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTC 517
consensus_15423#4      ACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTC 472
consensus_15423#3      ACCATCGCCATAAAGGATCTTAGCTCCGCAGCCAGGTTGGTCCACTGCTCCGACTGCGTC 602
consensus_15423#1      ACAATCGCCATATAGGATCTTAGCTC-GCAANCCAGTTGGTC-ACTGCTCCGACTG-GTN 525
consensus_15423#0      GGTGTTGAACTAGAGAAAAGCAATGT-TCTATTAATGGGGCCTACTGGCTCAGGTAAAAC 954
                           * *   ** ** *    *      *         ** * ****   *   *     

consensus_15423#2      TTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTA 577
consensus_15423#4      TTCATCTACAACCACCGCATCGATTCGCTTCTCACCAGATTTTGCATCTGGAATCTCGTA 532
consensus_15423#3      TTCATCTACAACCACCGCATCGATTCGCTTCTCACCTGATTTTGCATCTGGAATCTCGTA 662
consensus_15423#1      TT-ATCTACAAC-ACCGATT--ATTC-CTTCTAACC-GATTTTG-ATCTGAAACTCTACA 578
consensus_15423#0      TCTACTTGCTAAGAC---ATTAGCTCGCTTTGTG---AATGTGCCATTTGTAATTGCTGA 1008
                       *  *  * * *  **    *    ** ***        ** *   ** ** **      *

consensus_15423#2      CATAGCATCCATGAGAAT-----ATTCTCAAGGATAGTCC------TTAAACCACGTGCA 626
consensus_15423#4      CATAGCATCCATGAGAAT-----ATTCTCAAGGATAGTCC------TTAAACCACGTGCA 581
consensus_15423#3      CATAGCATCCATGAGAAT-----ATTCTCAAGGATAGTCC------TTAAACCACGTGCA 711
consensus_15423#1      TACATCATAGAATAATCTCAGGAATCCTTAAACACGGCACCCCATTTTGCATCGCTCTCT 638
consensus_15423#0      TGCAACAACATTGACACAGGCAGGGTATGTAGGAGAAGATG-----TAGAATCTATACTA 1063
                          * **      *             *  *  *            *   * *       

consensus_15423#2      CCCGTATTTTTG----------GACATTGCCTTCTTGGCAATTATTCTAAGTGCAG---- 672
consensus_15423#4      CCCGTATTTTTG----------GACATTGCCTTCTTGGCAATTATTCTAAGTGCAG---- 627
consensus_15423#3      CCCGTATTTTTG----------GACATTGCCTTCTTGGCAATTATTCTAAGTGCAG---- 757
consensus_15423#1      GCAATATTATAGCCCCCTAAAAGACCTCCCTTTCTTCTATATTTTTATTGTTCCCA---- 694
consensus_15423#0      TACAAGTTACTGGCGG-TGGCAGATTTTAACGTGCAAGCAGCACAACAAGGGATGGTGTA 1122
                             **   *          **  *     *                           

consensus_15423#2      CATCTGTAAAATGAAGCTTGACATTATTCATGCT--GAATAATTTCTTGAATTGT----T 726
consensus_15423#4      CATCTGTAAAATGAAGCTTGACATTATTCATGCT--GAATAATTTCTTGAATTGT----T 681
consensus_15423#3      CATC-------------------------------------------------------- 761
consensus_15423#1      CATTTTTTCTTAAAAACAAAAAGCTCTTTATGCCCCAAAAAGGAAAACCAAATACGAAAT 754
consensus_15423#0      CATCGATGAAGTTGATAAGATCACAAAGAAGGCTGAGAGCCTTAACATTAGTAGAGATGT 1182
                       ***                                                         

consensus_15423#2      TACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTG 786
consensus_15423#4      TACCCAGAGCATTTTTTGGCTCCATGAGAACCTGAACAAGCTGGTCCTCGTTTAGAGCTG 741
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      TTCTTGTCCCCTTTTCCAGATATTCACAACCCCCTACCCGCCCCCCCCCCCCCCTATTTT 814
consensus_15423#0      CTCCGGTGAAGGTGTCCAGCAGGCTTTGTTGAAAATGCTGGAAGGCACAATTGTCAATGT 1242
                                                                                   

consensus_15423#2      CCAAGCTAACAAGGATAGGAAACCGTCCAATAAATTCCGGAATAAGTCCATATGCTATTA 846
consensus_15423#4      CCA--------------------------------------------------------- 744
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      TTTTTNAAAAAAANNNNNNNNNNNNNNNAAAAAAAAAAAAANNNNNNNNNNNNNNNNTTA 874
consensus_15423#0      CCCTGAGAAAGGAGCAAGGAAGCATCCTCGCGGTGATAATATACAGATAGATACAAAGGA 1302
                                                                                   

consensus_15423#2      GGTCGCCACTCTCAA--------------------------------------------- 861
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      ATAATTTTAAATTATTTATC---------------------------------------- 894
consensus_15423#0      CATTCTTTTTATTTGTGGTGGTGCTTTTATTGACTTGGAGAAAACTATATCAGAGAGGCG 1362
                                                                                   

consensus_15423#2      ------------------------------------------------------------
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      ------------------------------------------------------------
consensus_15423#0      GCAAGATTCTTCTATTGGCTTTGGGGCACCTGTCCGTGCTAACATGAGGGCAGGTGGCAT 1422
                                                                                   

consensus_15423#2      ------------------------------------------------------------
consensus_15423#4      ------------------------------------------------------------
consensus_15423#3      ------------------------------------------------------------
consensus_15423#1      ------------------------------------------------------------
consensus_15423#0      CTCAAGTGCTCAAGTGACATCATCCTTGTTGGAATCAGTTGAGAGTGGCGACCTAATAGC 1482
                                                                                   

consensus_15423#2      ----------------
consensus_15423#4      ----------------
consensus_15423#3      ----------------
consensus_15423#1      ----------------
consensus_15423#0      ATATGGACTTATTCCG 1498
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)