These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15447#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1993 fasta sequence [CCTTTCTCCCACGCCCAAATCGCGCACTTCCCCTGTTGAGGAGGGAGGCGACGTCGCCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA-GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT-GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT-CCTGG-ACTT-GGATGGATGTTAACAAAG-CCTA-CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC-TTATTGGGATGACT-GGGTGAGGCT-AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG-CAGAACATACAATTTTGGCGAACATGGGTC-AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA-CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT-GAGCTA-CCTCAAGGAGGACAAGTTCCT-GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG-CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAGCTTAAACATAACATCGTGTTCTGTGTTTTGTTTGCCATTGAAAACTGCCTGTAATGTAGTTTTTGAACTGGACATATGCTAGAATGAAGGGAAATGAGATACTAATTGATATTGA] [+] EMBL AK101526 [CCTTTCTCCCACGCCCAAATCGCGCACTTCCCCTGTTGAGGAGGGAGGCGACGTCGCCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAG ] [+] EMBL CB638695 [ AAATCGCGCACTTCCCCTGTTGAGGAGGGAGGCGACGTCGCCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAAGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACG ] [+] EMBL CF304454 [ AGGCGACGTCGCCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTT ] [+] EMBL CB640796 [ CCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCTTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTC ] [+] EMBL CB663078 [ CCCGTCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATANAT ] [+] EMBL CB633409 [ TCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTCGCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCGTCCTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAAGGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCCTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATACATGGAGAAGTGAAG AAAAAGCTTTGAGTTATAATGAAATAACATA ] [+] EMBL CB638693 [ TCCGACGCCATCCATCTATTCGCGCCGCACCGACCGCTCAACTCTTTCTTCGCGCAAGCGGAGGCGGTGGCGCAAGCGGCGTCTTCCTCCACCTGATCCACCTCCACTTGCTCCGGACCGCACAAGAATAAGAAGAACAAGAAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCACTACCAAGTAGTAGCCTACTCCTCCTGCCCTTTCTCCCCAACATCCCATCCCACATCAAAGGC ] [+] EMBL CF323456 [ TGGCGCGGAGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAAGGGCCAGGAGAG TGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAA ] [+] EMBL OSA457976 [ AGCCCCTGCGACCTCCGCATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCT ] [+] EMBL CB631083 [ GCATCCTCCTCCTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTACTCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCCTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTTATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGATGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCTGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTAT ] [+] EMBL CB677281 [ AAGCCTTAAAATCCGAAAACCAATGCACCAGTCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGAAGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCG ] [+] EMBL CF324472 [ ggAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCTCGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGTTGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTATCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGAAGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGAACCTGTGCGCACTGAAA GGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTACAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCATGGGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATT ] [+] EMBL AK058826 [ GGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGAAGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACTTGATAACGATAAGACAATCAT GGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATGTGTGATTCATCACGTG ] [-] EMBL CB633410 [ ATGGACAAAAGCAATTTGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTT CCTGG ACTT GGATGGATGTTAACAAAG CCTA CATGGATTGAGCTGTCACCTAAGTGGCCCAAAGC TTATTGGGATGACT GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGGGGTATATGTGATTCATCACGTGAGATTCATACAaaaaaaaga ] [+] EMBL C96708 [ CGGATTTCTTTCCCTGGNCCTTGGGATGGATGTTAACAAAGCCCTACCATGGATTGAGCTGTCACCTAAGTGGCCCAAAGCTTTTTTGGGATGACTGGGGTGAGGCTAAAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTGCCAGAACATACAATTTTGGCGAACATGGGTCAAAGCATGGGGCAATTCTTCAGACAGTACTTGGAACCCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCTGGAGCTACCCTCAAGGAGGACAAGTTCCTNAATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATGCCCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAGCTTAAACAAAAaa ] [-] EMBL CB631084 [ T GGGTGAGGCT AAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTTTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAGCTTAAACATTACATCGTGTTCTGTGTTTTGTTTGCCATTGAAAACTGCCTGTAATGTAGTTTTTGAACTGGACATATGCTAGAATGAAGGGAAATGAGATACTAATTGATATTGA] [-] EMBL CB638696 [ CACAGAGACCGGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACTT GAGCTA CCTCAAGGAGGACAAGTTCTT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCAC ] [-] EMBL CB669650 [ GGCAATTTATTCGCCCGGAAGTCTG CAGAACATACAATTTTGGCGAACATGGGTC AAGCATGGGGCAATTCTTCAGACAGTACTTGGAA CCAATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCT GAGCTA CCTCAAGGAGGACAAGTTCCT GATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATCTGATG CCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGACTTCCATTGCACCGAAAGCTTAAACATCACATCGTGTTCTGTGTTTTGTTTGCCATTGAAAACTGCCTGTAATGTAGTTTTTGAACTGGACAAAGGGTAGAATGAAGGGAAATGAG ] [-] EMBL CB638694 [ GTCGCTAGTGCCACCCCTCTCCATGGATGTGATG CAGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGTTTATAAAGGAGTAGTAGTCTTCCGGGACAAGAGTAGTCGAAGAAGAATATACTTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTATCATTGTTTCAGATACAAGCGGCAGCACCTCACTTGACCACTGAGCAGAGATGACCTGCCTGACATTT ] [-] EMBL CB663079 [ TGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAGCGATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCATCAGTCAGCTTAGGGTATAGTGTTGTTGAGG ] [+] EMBL CF330218 [ TGGATGCGGATGTAAGGATCCAGTATAACTATCAGGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCATTCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAATATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGAGATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGCTGACTTGCCTGACATTTTGCTGTATATGTGATTCATC ] consensusID : consensus_15447#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 190 fasta sequence [NCGCGAGANNNCAGCNNACTTGTTGGGNGAANTTGGGTCCTGGGNCCCCCCNTCGAAGGTCGACCCACNGCGTCCTCCCACGNGTCCGNCCACGCGTCCGAGGCGACGTCGNCCGTNTNTCCGCGTCGGCTNCGGAGCCGACCCACTCCCCTNCTCCGCCGCCATCCATCTATTCGNGCCGCACCGCCCG] [+] EMBL OSC106011 [NCGCGAGANNNCAGCNNACTTGTTGGGNGAANTTGGGTCCTGGGNCCCCCCNTCGAAGGTCGACCCACNGCGTCCTCCCACGNGTCCGNCCACGCGTCCGAGGCGACGTCGNCCGTNTNTCCGCGTCGGCTNCGGAGCCGACCCACTCCCCTNCTCCGCCGCCATCCATCTATTCGNGCCGCACCGCCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15447#0 CCTTTCTCCCACGCCCAAATCGCGCACTTCCCCTGTTGAGGAGGGAGGCGACGTCGCCCG 60 consensus_15447#1 -------------NCGCGAGANNNCAGCNNACTTGTTGG---GNGAANTTGGGTCCTGGG 44 * * ** * ***** * ** *** * consensus_15447#0 TCTCTCCGCGTCGGCTCCGGCGCCGACCCACTCCCCTCCTCCGCCGCCATCCATCTATTC 120 consensus_15447#1 NCCCCCCN-------TCGAAGGTCGACCCACNGCGTCCTCCCACGN--GTCCGNCCACGC 95 * * ** ** * ******** * * ** * *** * * * consensus_15447#0 GCGCCGCACCGCCCGCTCAACTCTTCCTTCGCGCAGGCGGCGGCGGTGGCGCAGGCGGCG 180 consensus_15447#1 GT-CCGAGGCGAC--GTCGNCCGTNTNTCCGCGTCGGCTNCGGAGCCGACCCACTCC-CC 151 * *** ** * ** * * * **** *** *** * * * ** * * consensus_15447#0 TCTTCCTCCACCTGATCCACCTCCACTTCCTCCGGACCGCACAAGAATAAGAAGAAGAAG 240 consensus_15447#1 TNCTCCGCCGCC--ATCCA--TCTATTCGNGCCGCACCGCCCG----------------- 190 * *** ** ** ***** ** * * *** ***** * consensus_15447#0 AAGTGCAGGTACGGTGCAGGTGCAGATCCAATTGCGAGCTCACCTGCTCTGCCCTGCCCA 300 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 CTACCAAGTAGTAGCCTCCTCCTCCTCCCCTTTCTCCCCAACATCCCATCCCAAATCAAA 360 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 GGCTACTAGACTAGTGTTGGGGGAGATCCAAGAGATGGCGCGGAGCCCCTGCGACCTCCG 420 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 CATCCTCCTCGTCGCCGCCGCTGCAGCCTTCATCTACATCCAAGTCCGCCTTTTTTCTAC 480 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TCAGTCCCACTACGCCGACCGCCTCGCACAAGCAGAAAAATCCGAAAACCAATGCACCAG 540 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TCAACTCCGCTCCTTGATCGATCAAGTCAGCTCTCAGCAGGAGAAGATTGTCGCGTTGGA 600 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 AGAGATGAAGATACGCCAAGACGAAGAACGTGTACACCTCAAGATTTTAATCCAAGATCT 660 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 CGAAAAAAGGAGCGTGCAGACCTTAGTAAACAACAATGTGGCTCCTGTTGCTGCTGTTGT 720 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TGTAATGGCTTGCAATCGACCAGACTATTTGCAAAGGACAGTTGAATCTATCCTGAAGTA 780 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TCAGACATCAGTGGCTTCAAAGTTTCCACTATTTATATCTCAGGATGGAATAAATGGAGA 840 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 AGTGAAGAAAAAAGCTTTGAGTTATAATGAAATAACATATATGCAGCATTTAGATCTTGA 900 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 ACCTGTGCGCACTGAAAGGCCAGGAGAGTTGATAGCATATTACAAGATAGCCAAACATTA 960 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 CAAATGGGCCTTGGATGAGCTATTCATCAAACACAACTTTGCGCGAGTAATAATTCTGGA 1020 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 AGATGATATGGAGATCGCCCCTGATTTTTTTGACTACTTCGAGGCTGCAGCTAAATTACT 1080 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TGATAACGATAAGACAATCATGGCCGTTTCTTCCTGGAATGACAATGGACAAAAGCAATT 1140 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TGTTTACGACCCAAAAGCTCTTTACCGGTCGGATTTCTTTCCTGGACTTGGATGGATGTT 1200 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 AACAAAGCCTACATGGATTGAGCTGTCACCTAAGTGGCCCAAAGCTTATTGGGATGACTG 1260 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 GGTGAGGCTAAAAGAGGTACACAGAGACCGGCAATTTATTCGCCCGGAAGTCTGCAGAAC 1320 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 ATACAATTTTGGCGAACATGGGTCAAGCATGGGGCAATTCTTCAGACAGTACTTGGAACC 1380 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 AATCAAGCTAAATGATGCCCATATCAAGTGGAATTCTGAGGACCTGAGCTACCTCAAGGA 1440 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 GGACAAGTTCCTGATCCAATTTGGGAAAGACGTCGCTAGTGCCACCCCTCTCCATGGATC 1500 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TGATGCCGCGTTGAAAGCCCACAATATGGATGCGGATGTAAGGATCCAGTATAACGATCA 1560 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 GGAAGACTTTGAGCGGATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGATGGCAT 1620 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TCCAAGAACAGCTTATAAAGGAGTAGTAGTCTTCCGGTACAAGAGTAGTCGAAGACGAAT 1680 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 ATACCTCGTTGGTCCGGATTCCCTCAGTCAGCTTAGGGTATAGTGTTGTTGAGGTGTGGA 1740 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 GATAGTTTCTCATTGTTTCAGATACAAGCGGCAGCACCTCACCTGACCACTGAGCAGAGC 1800 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TGACCTGCCTGACATTTTGCTGTATATGTGATTCATCACGTGAGATTCATACATAGACGA 1860 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 CTTCCATTGCACCGAAAGCTTAAACATAACATCGTGTTCTGTGTTTTGTTTGCCATTGAA 1920 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 AACTGCCTGTAATGTAGTTTTTGAACTGGACATATGCTAGAATGAAGGGAAATGAGATAC 1980 consensus_15447#1 ------------------------------------------------------------ consensus_15447#0 TAATTGATATTGA 1993 consensus_15447#1 ------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||