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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15451#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1875 fasta sequence
[GGCAACGCGAAACTCGCGGAGGGCTCCCAGACCTAACCGGCGGCGGTGGCGGCGGCCATGGGAGGAGCCTACAACCTCAAGCTCCTCGCCGCCCTCTCCGCGCTCGTCCTCCTCCTCGCCGCCTCGCGCCCCTTCCTCCCGGGGCTCCTGGAGGCGGCCCTCCGCGCCCCCGTCCTCCCGCGCGACCTCCTCCCTCTCCTGCCCTGGCCGGTGGCCCAGCCGCTGCTCCGCCGCCTCGCGCTGCGCGGCGCCGCCGACCTCCTCCCGTCCTTCGTCGGCGTCGCGCGGGAGCCAGGTGATGGCGGCGCCCGCGCCGCCGAGTGGAAGGGCGCCTGCTTCTACGATAACCGGGCGTGGATGGAGTTCCACAACGGGACTGATGGGGGCC---T-TGGAGGTGGTACGCTCCATCTCGAGACAAACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGTT-GACGATATCCACTCTGGAGATTTTTTGGTTTTATCAAAAATTCGTGGGCGCT-GGGGTGGTTTTGAAACCCTAGAGAAGTGGGTTACT-GGAGCTTATGCTGGCCATACCGCAGTTTGCCTCAGGGATTCTGAAGGAAAGCTTTGGGTTGGGGAATCTGGTCATGAGAATGAACAGGGAGAAGATATTA-TTGCTATCTTGCCATGGGAAGAATGGTGGGACTTTGAAGTAAAAAAGGATGATTCCAATCCTCAGATTGCATTACTACCTTTGCATCCAGATTTGCGTGCAAAATTTAATGAGACAGCAGCTTGGGAATATGCAAAAAGCATGGATGGAAAACCTTATGGGTACCACAATATGATTTTTAGTTGGATTGATACCATAAGCGACAACTATCCACCGCCATTAGATGCTCATGTGGTTGCCTCTGTGATGACTATGTGGAACAAACTTCAACCAGAGTATGCTGCCAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGGAACTAAGGGTCTTGATCTACCTGAAATCATAGTGGAATCAGAGAAGCGTGGGATGACATTTGACAAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGCTTCTTGTGTGGCTTACGTCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCCAATTGCCAGCTCTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCC-T-CAACTTTTTTGAGAACAATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTC-TGCCAAATAAAGGGCAGGTATCGAATGGAGTTGC-CTGGATAC-AACACCA-TGCAGCCGTACCCTCACATGAATGAAAGGTGT-CCTTCTCT-GCCTCCGAATTAT-AACAGACCGCGAAAT-TGCT-GATCTGTTACACATTATTACGCCTTGCAT-TTTGATATATGCTGGCTT-TTAGT-CTGTACT-TTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAAT-TGTTTTCTTT-GTTGTTACT-ACGAAGC-AACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCTCTACCCTTGATGCTAAAAAAAGGAAAA]
[+] EMBL AK101086 [GGCAACGCGAAACTCGCGGAGGGCTCCCAGACCTAACCGGCGGCGGTGGCGGCGGCCATGGGAGGAGCCTACAACCTCAAGCTCCTCGCCGCCCTCTCCGCGCTCGTCCTCCTCCTCGCCGCCTCGCGCCCCTTCCTCCCGGGGCTCCTGGAGGCGGCCCTCCGCGCCCCCGTCCTCCCGCGCGACCTCCTCCCTCTCCTGCCCTGGCCGGTGGCCCAGCCGCTGCTCCGCCGCCTCGCGCTGCGCGGCGCCGCCGACCTCCTCCCGTCCTTCGTCGGCGTCGCGCGGGAGCCAGGTGATGGCGGCGCCCGCGCCGCCGAGTGGAAGGGCGCCTGCTTCTACGATAACCGGGCGTGGATGGAGTTCCACAACGGGACTGATGGGGGCC T TGGAGGTGGTACGCTCCATCTCGAGACAAACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGTT GACGATATCCACTCTGGAGATTTTTTGGTTTTATCAAAAATTCGTGGGCGCT GGGGTGGTTTTGAAACCCTAGAGAAGTGGGTTACT GGAGCTTATGCTGGCCATACCGCAGTTTGCCTCAGGGATTCTGAAGGAAAGCTTTGGGTTGGGGAATCTGGTCATGAGAATGAACAGGGAGAAGATATTA TTGCTATCTTGCCATGGGAAGAATGGTGGGACTTTGAAGTAAAAAAGGATGATTCCAATCCTCAGATTGCATTACTACCTTTGCATCCAGATTTGCGTGCAAAATTTAATGAGACAGCAGCTTGGGAATATGCAAAAAGCATGGATGGAAAACCTTATGGGTACCACAATATGATTTTTAGTTGGATTGATACCATAAGCGACAACTATCCACCGCCATTAGATGCTCATGTGGTTGCCTCTGTGATGACTATGTGGAACAAACTTCAACCAGAGTATGCTGCCAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGGAACTAAGGGTCTTGATCTACCTGAAATCATAGTGGAATCAGAGAAGCGTGGGATGACATTTGACAAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGCTTCTTGTGTGGCTTACGTCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCCAATTGCCAGCTCTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCC T CAACTTTTTTGAGAACAATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTC TGCCAAATAAAGGGCAGGTATCGAATGGAGTTGC CTGGATAC AACACCA TGCAGCCGTACCCTCACATGAATGAAAGGTGT CCTTCTCT GCCTCCGAATTAT AACAGACCGCGAAAT TGCT GATCTGTTACACATTATTACGCCTTGCAT TTTGATATATGCTGGCTT TTAGT CTGTACT TTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAAT TGTTTTCTTT GTTGTTACT ACGAAGC AACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATC ]
[+] EMBL CB648390 [ CGCGGAGGGCTCCCAGACCTAACCGGCGGCGGTGGCGGCGGCCATGGGAGGAGCCTACAACCTCAAGCTCCTCGCCGCCCTCTCCGCGCTCGTCCTCCTCCTCGCCGCCTCGCGCCCCTTCCTCCCGGGGCTCCTGGAGGCGGCCCTCCGCGCCCCCGTCCTCCCGCGCGACCTCCTCCCTCTCCTGCCCTGGCCGGTGGCCCAGCCGCTGCTCCGCCGCCTCGCGCTGCGCGGCGCCGCCGACCTCCTCCCGTCCTTCGTCGGCGTCGCGCGGGAGCCAGGTGATGGCGGCGCCCGCGCCGCCGAGTGGAAGGGCGCCTGCTTCTACGATAACCGGGCGTGGATGGAGTTCCACAACGGGACTGATGGGGGCC T TGGAGGTGGTACGCTCCATCTCGAGACAAACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGTT GACGATATCCACTCTGGAGATTTTTTGGTTT ]
[+] EMBL CB647901 [ GCGGAGGGCTCCCAGACCTAACCGGCGGCGGTGGCGGCGGCCATGGGAGGAGCCTACAACCTCAAGCTCCTCGCCGCCCTCTCCGCGCTCGTCCTCCTCCTCGCCGCCTCGCGCCCCTTCCTCCCGGGGCTCCTGGAGGCGGCCCTCCGCGCCCCCGTCCTCCCGCGCGACCTCCTCCCTCTCCTGCCCTGGCCGGTGGCCCAGCCGCTGCTCCGCCGCCTCGCGCTGCGCGGCGCCGCCGACCTCCTCCCGTCCTTCGTCGGCGTCGCGCGGGAGCCAGGTGATGGCGGCGCCCGCGCCGCCGAGTGGAAGGGCGCCTGCTTCTACGATAACCGGGCGTGGATGGAGTTCCACAACGGGACTGATGGGGGCC T TGGAGGTGGTACGCTCCATCTCGAGACAAACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGTT GACGATATCCACTCTGGAGATTTTTTGGTTTTATCAAAAATTCGTGGGCGCTGGGGGTGGTTTTGAAACCCTAGAGAAGTG ]
[+] EMBL AU056891 [ ggacagGCCGGGCGCGGTCGGCTCGCG GCTG GAGTGGAAGGGCGCCTGCTTCTACGAGAACGAGGCGTGGCTGGTCCTCCACAAC GACT CCGGCTCCAAGTACGGAGGCGGCACG TCCACATCAAGACAAACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAANTGTTGGACGATATCCACTCTGGAGATTTTTTGGTNNTATCAAAAATTCGTGGGCGCT GGGGTGGTTTTGAAACCCTAGAGAAGTGGGTTACTGGGAGCTTATGCTGGCCATACCGCAGTTTGCCTCAGGGATTCTGAAGGANAGCTTTGGGTTGGGGAATCTGGTCATGAGAATGAACAGGGAGANGATATTAGTGGCTATCTT ]
[+] EMBL CA753932 [ CATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGTT GACGATATCCACTCTGGAGATTTTTTGGTTTTATCAAAAATTCGTGGGCGCT GGGGTGGTTTTGAAACCCTAGAGAAGTGGGTTACT GGAGCTTATGCTGGCCATACCGCAGTTTGCCTCAGGGATTCTGAAGGAAAGCTTTGGGTTGGGGAATCTGGTCATGAGAATGAACAGGGAGAAGATATTA TTGCTATCTTGCCATGGGAAGAATGGTGGGACTTTGAAGTAAAAAAGGATGATTCCAATCCTCAGATTGCATTACTACCTTTGCATCCAGATTTGCGTGCAAAATTTAATGAGACAGCAGCTTGGGAATATGCAAAAAGCATGGATGGAAAACCTTATGGGTACCACAATATGATTTTTAGTTGGATTGATACCATAAGCGACNACTATCCACCGCCATTAGATGCTCATGTGGNTGCCTCTGTGATGACTATGTGGGACAAACTTCAACCAGAGTATGCTGCCAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGGAACTAAGGGTCTTGATCTAC ]
[+] EMBL D43115 [ AAAAAGCATGGATGGAAAACCTTATGGGTACCACAATATGATTTTTAGTTGGATTGATACCATAAGCGACAACTATCCACCGCCATTAGATGCTCATGTGGTTGCCTCTGTGATGACTATGTGGAACAAACTTCAACCAGAGTATGCTGCCAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGGAACTAAGGGTCTTGATCTACCTGAAATCATAGTGGAATCAGAGAAGCGTGGGATGACATTTGACAAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGCTTCTTGTGTGGCTTACGTCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCC ATTGCCAGCTCTATAG ]
[-] EMBL CB647902 [ TCTGGGATGACTATGTGGAACAAACTTCAACCAGAGTATGCTGCCAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGGAACTAAGGGTCTTGATCTACCTGAAATCATAGTGGAATCAGAGAAGCGTGGGATGACATTTGACAAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGCTTCTTGTGTGGCTTACGTCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCCAATTGCCAGCTCTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCC T CAACTTTTTTGAGAACAATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTC TGCCAAATAAAGGGCAGGTATCGAATGGAGTTGC CTGGATAC AACACCA TGCAGCCGTACCCTCACATGAATGAAAGGTGT CCTTCTCT GCCTCCGAATTAT AACAGACCGCGAAAT TGCT GATCTGTTACACATTATTACGCCTTGCAT TTTGATATATGCTGGCTT TTAGT CTGTACT TTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAAT TGTTTTCTTT GTTGTTACT ACGAAGC AACTTCCGCAAATAAGGAAGATTATGATTGGGTGAATGTACAGTAAATCTCTACCCTTGATGCTAAAAAAAGGAAAA]
[-] EMBL CB674487 [ ATGCTGCCAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGGAACTAAGGGTCTTGATCTACCTGAAATCATAGTGGAATCAGAGAAGCGTGGGATGACATTTGACAAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGCTTCTTGTGTGGCTTACGTCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCCAATTGCCAGCTCTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCC T CAACTTTTTTGAGAACAATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTC TGCCAAATAAAGGGCAGGTATCGAATGGAGTTGC CTGGATAC AACACCA TGCAGCCGTACCCTCACATGAATGAAAGGTGT CCTTCTCT GCCTCCGAATTAT AACAGACCGCGAAAT TGCT GATCTGTTACACATTATTACGCCTTGCAT TTTGATATATGCTGGCTT TTAGT CTGTACT TTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAAT TGTTTTCTTT GTTGTTACT ACGAAGC AACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCT ]
[-] EMBL CB672753 [ CCAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGGAACTAAGGGTCTTGATCTACCTGAAATCATAGTGGAATCAGAGAAGCGTGGGATGACATTTGACAAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGCTTCTTGTGTGGCTTACGTCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCCAATTGCCAGCTCTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCC T CAACTTTTTTGAGAACAATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTC TGCCAAATAAAGGGCAGGTATCGAATGGAGTTGC CTGGATAC AACACCA TGCAGCCGTACCCTCACATGAATGAAAGGTGT CCTTCTCT GCCTCCGAATTAT AACAGACCGCGAAAT TGCT GATCTGTTACACATTATTACGCCTTGCAT TTTGATATATGCTGGCTT TTAGT CTGTACT TTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAAT TGTTTTCTTT GTTGTTACT ACGAAGC AACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCT ]
[-] EMBL CB648391 [ CAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGGAACTAAGGGTCTTGATCTACCTGAAATCATAGTGGAATCAGAGAAGCGTGGGATGACATTTGACAAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGCTTCTTGTGTGGCTTACGTCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCCAATTGCCAGCTCTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCC T CAACTTTTTTGAGAACAATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTC TGCCAAATAAAGGGCAGGTATCGAATGGAGTTGC CTGGATAC AACACCA TGCAGCCGTACCCTCACATGAATGAAAGGTGT CCTTCTCT GCCTCCGAATTAT AACAGACCGCGAAAT TGCT GATCTGTTACACATTATTACGCCTTGCAT TTTGATATATGCTGGCTT TTAGT CTGTACT TTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAAT TGTTTTCTTT GTTGTTACT ACGAAGC AACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCT ]
[+] EMBL AU092361 [ TCAGAGAAGCGTGGGATGACA TTGACAAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGCTTCTTGTGTGGCTTACGNCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCCAATTGCCAGCTCTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCC TCCAACTTTTTTGAGAACAATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTC TGCCAAATAAAGGGCAGGTATCGAATGGAGTTGC CTGGATAC AACACCA TGCAGCCGTACCCTCACATGAATGAAAGGTGT CCTTCTCT GCCTCCGAATTAT AACAGACCGCGAAAT TGCT GATCTGTTACACATTATTACGCCTTGCAT TTTGATATATGCTGGCTT TTAGT CTGTACT TTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAAT TGTTTTCTTT GTTGTTACT ACGAAGC AACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCTCTACCCTTGATGCTAAAAAA ]
[+] EMBL BM419963 [ CTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCCGT CAACTTTTTTGAGAAC ATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTCGTGCCAAATAAAGGGCAGGTATCGAATGGAGTTGCGCTGGATAC AACACCAGTGCAGCCGNACCCTCACATGAATGAAAGGTGTGCCTTCTCT GCCTCCGAATTATGAACAGACCGCGAAATNNGCTGGATCTGTTACACATTATTACGCCTTGCATGTTTGATATATGCTGGCTTGTTAGTGCTGTACTGTTAGCTGTACATA CACTGTAGTCTGTAGGTATGCAATNTGTTTTCTTTGGTTGTTACTGACGAAGCAAACTTCCGC AATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATC ]
[+] EMBL BI811453 [ TGAGAACAATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTC TGCCAAATAAA GGCAGGTATCGAATGGAGTTGC CTGGATACAAACACCA TGCAGCCGTACCCTCACATGAATGAAAGGTGT CCTTCTCTGGCCTCCGAATTAT AACAGACCGCGAAAT TGCT GATCTGTTACACATTATTACGCCTTGCAT TTTGATATATGCTGGCTT TTAGT CTGTACT TTAGCTGTACATA CACTGTAGTCTGTAGGTATGCAAT TGTTTTCTTT GTTGTTACT ACGAAGC AACTTCCGC AATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATC ]
[+] EMBL AU056892 [ ACAGTGTCAAGCTCCCCTTC TGCCAAATAAAGGGCAGGTACCGAATGGANTTGC CTGGATAC AACACCA TGCAGCCGTACCCTCACATGAATGAAAGGTGT CCTTCTCT GCCTCCGAATTAT AACAGACCGCGAAAT TGCT GATCTGTTACACATTATTACGCCTTGCAT TTTGATATATGCTGGCTT TTAGT CTGTACT TTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAAT TGTTTTCTTT GTTGTTACT ACGAAGC AACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATC ]
[+] EMBL CF301207 [ CTTT TGCCAAATAAAGGGCAGGTATCGAATGGAGTTGC CTGGATAC AACACCA TGCAGCCGTACCCTCACATGAATGAAAGGTGT CCTTCTCT GCCTCCGAATTAT AACAGACCGCGAAAT TGCT GATCTGTTACACATTATTACGCCTTGCAT TTTGATATATGCTGGCTT TTAGT CTGTACT TTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAAT TGTTTTCTTT GTTGTTACT ACGAAGC GACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATC ]
[-] EMBL OS31681 [ aag CTGGACT TAAGCGGTACATA CACTGTAGTCTGTAGGTATGCAAT TGTTTCCTTT GTTGTTACT ACGAAGC AACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCT ]
consensusID : consensus_15451#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 796 fasta sequence
[AGAAC-CCTTTCTCATCGCGGCTGCGCTGCTGCTGCTAGTGGCAGCCTCGCTCGCCGCGGCACTGCTCTACTCCGCCGGCCCACGCGATGTCGACGGCCTCGTCGGCGCGCTGCCGCGGGCCACCCTGCCGTTCAGCCCCATGGACGTCCTGCCCCTCCTGCCGCGGACCGCGGCCATGGCGGCGCTCCGCGCTCTCCGCGGCGTGTCGGACATCTTCCCGGTGTTCGTCGGGGCGGCGTCGGACAGGCCGGGCGCGGTCGGCTCGCGGCTGGAGTGGAAGGGCGCCTGCTTCTACGAGAACGAGGCGTGGCTGGTCCTCCACAACGACTCCGGCTCCAAGTACGGAGGCGGCACGCTCCACATCAAGACAAACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGTTGACGATATCCACTCTGGAGATTTTTTGGTTTTATCAAAAATTCGTGGGCGCTGGGGTGGTTTTGAAACCCTAGAGAAGTGGGTTACTGGAGCTTAT]
[+] EMBL CB674486 [AGAAC CCTTTCTCATCGCGGCTGCGCTGCTGCTGCTAGTGGCAGCCTCGCTCGCCGCGGCACTGCTCTACTCCGCCGGCCCACGCGATGTCGACGGCCTCGTCGGCGCGCTGCCGCGGGCCACCCTGCCGTTCAGCCCCATGGACGTCCTGCCCCTCCTGCCGCGGACCGCGGCCATGGCGGCGCTCCGCGCTCTCCGCGGCGTGTCGGACATCTTCCCGGTGTTCGTCGGGGCGGCGTCGGACAGGCCGGGCGCGGTCGGCTCGCGGCTGGAGTGGAAGGGCGCCTGCTTCTACGAGAACGAGGCGTGGCTGGTCCTCCACAACGACTCCGGCTCCAAGTACGGAGGCGGCACGCTCCACATCAAGACAAACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGTTGACGATATCCACTCTGGAGATTTTTTGGTTTTATCAAAAATTCGTGGGCGCTGGGGTGGTTTTGAAACCCTAGAGAAGTGGGTTACTGGAGCTTAT]
[+] EMBL CB672752 [AGAACACCTCGCTCATCGCGGCTGCGCTGCTGCTGCTAGTGGCAGCCTCGCTCGCCGCGGCACTGCTCTACTCCGCCGGCCCACGCGATGTCGACGGCCTCGTCGGCGCGCTGCCGCGGGCCACCCTGCCGTTCAGCCCCATGGACGTCCTGCCCCTCCTGCCGCGGACCGCGGCCATGGCGGCGCTCCGCGCTCTCCGCGGCGTGTCGGACATCTTCCCGGTGTTCGTCGGGGCGGCGTCGGACAGGCCGGGCGCGGTCGGCTCGCGGCTGGAGTGGAAGGGCGCCTGCTTCTACGAGAACGAGGCGTGGCTGGTCCTCCACAACGACTCCGGCTCCAAGTACGGAGGCGGCACGCTCCACATCAAGACAAACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGTTGACGATATCCACTCTGGAGATTTTTTGGTT ]
consensusID : consensus_15451#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 584 fasta sequence
[GCCCTTTATGGAGTACC-AGGA-GCTGGACTCCTTTGACCCACATT-CCAGGCTCTATAGAAGTTACGTG-ATTCACCATAAAAGATGCTTACAGCCTCAACTTTTTTGAGA-ACAATATGACA-CGGCTTCCCGTGTGGTGCAACA-AAGATGACAGTGTCAAGCTCCCCTTCTGCCAAATAAAGGGCAGGTATCGAATGGAGTTGCCTGGATAC-ACACCATGCAGCCGTACCCTCACATGAATGAAAGGTGTCCTTCTCTGCCTCCGAATTATAACAGACCGCGAAATTGCTGATCTGTTACACATTATTACGCCTTGCATTTTGATATATGCTGGCTTTTAGTCTGTACTTTAGCTGTACAT--ACCTGTAGTCTGTAGGTATG--CATTGTTTTCTTTGTTGTTACTACGAAGC-ACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCTCTACCCTTGATGCTA-CAGGTGTTACCTGCTGTAGGGTTCATATAACTTTCGTCATATAGTAATTGAC-AATACATGTAGAAAATGTATGTACTTTGTTGTATTGAAAATTTGAAATCTGATCGTAAAAA]
[+] EMBL BI810218 [GCCCTTTATGGAGTACC AGGA GCTGGACTCCTTTGACCCACATT CCAGGCTCTATAGAAGTTACGTG ATTCACCATAAAAGATGCTTACAGCCTCAACTTTTTTGAGA ACAATATGACA CGGCTTCCCGTGTGGTGCAACA AAGATGACAGTGTCAAGCTCCCCTTCTGCCAAATAAAGGGCAGGTATCGAATGGAGTTGCCTGGATAC ACACCATGCAGCCGTACCCTCACATGAATGAAAGGTGTCCTTCTCTGCCTCCGAATTATAACAGACCGCGAAATTGCTGATCTGTTACACATTATTACGCCTTGCATTTTGATATATGCTGGCTTTTAGTCTGTACTTTAGCTGTACAT ACCTGTAGTCTGTAGGTATG CATTGTTTTCTTTGTTGTTACTACGAAGC ACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCTCTACCCTTGATGCTA CAGGTGTTACCTGCTGTAGGGTTCATATAACTTTCGTCATATAGTAATTGAC AATACATGTAGAAAATGTATGTACTTTGTTGTATTGAAAATTTGAAATCTGATCGTAAAAA]
[+] EMBL BM420054 [ ACCAAGGAGGCTGGACT CTTTGACCC CATTGCCCAGCTCTATAGAAGTTAC TGAATTCACCATAAAAGATGCTTACAGCCTCAACTTTTTTGAGAGACCATATGACACCGGCTTCCCGTGTGGTGCAACACAAGATGACAGTGTCAAGCTCCCCTTCTGCCAAATAAAGGGCAGGTATCGAATGGAGTTGCCTGGATACAACACCATGCAGCCGTACCCTCACATGAATGAAAGGTGTCCTTCTCTGCCTCCGAATTATAACAGACCGCGAAATTGCTGATCTGTTACACATTATTACGCCTTGCATTTTGATATATGCTGGCTTTTAGTCTGTACTTTAGCTGTACATACACCTGTAGTCTGTAGGTATGCACATTGTTTTCTTTGTTGTTACTACGAAGCAACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCTCTACCCTTGATGCTACCAGGTGTTAaaaaaaaaa ]
[-] EMBL CA754803 [ TTCACATAACTTTCGTCATATAGTAATTGACAAATACATGTAGAAAATGTATGTACTTTGTTGTATTGAAAATTTGAAAaaaaaaaaa ]
consensusID : consensus_15451#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 220 fasta sequence
[TGGCGAAGAACAACACGCTCATCGCGGCTGCGCTGCTGCTGCTAGTGGCAGCCTCGCTCGCCGCGGCACTGCTCTACTCCGCCGGCCCACGCGATGTCGACGGCCTCGTCGGCGCGCTGCCGCGGGCCACCCTGCCGTTCAGCCCCATGGACGTCCTGCCCCTCCTGCCGCGGACCGCGCCACTGGCGGCGCTCCGCGTTCATCCGCGGCGTGTCGGACA]
[+] EMBL AU062625 [TGGCGAAGAACAACACGCTCATCGCGGCTGCGCTGCTGCTGCTAGTGGCAGCCTCGCTCGCCGCGGCACTGCTCTACTCCGCCGGCCCACGCGATGTCGACGGCCTCGTCGGCGCGCTGCCGCGGGCCACCCTGCCGTTCAGCCCCATGGACGTCCTGCCCCTCCTGCCGCGGACCGCGCCACTGGCGGCGCTCCGCGTTCATCCGCGGCGTGTCGGACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15451#1 ---------------------------------------AGAACC-CTTTCTCATCGCGG 20
consensus_15451#3 ---------------------------------TGGCGAAGAACAACACGCTCATCGCGG 27
consensus_15451#0 --------------------GGCAACGCGAAACTCGCGGAGGGCTCCCAGACCTAACCGG 40
consensus_15451#2 GCCCTTTATGGAGTACCAGGAGCTGGACTCCTTTGACCCACATTCCAGGCTCTATAGAAG 60
* *
consensus_15451#1 CTGCGCTGCTGCTGCTAGTGG----------CAGCCTC--GCTCGCCG----CGGCACTG 64
consensus_15451#3 CTGCGCTGCTGCTGCTAGTGG----------CAGCCTC--GCTCGCCG----CGGCACTG 71
consensus_15451#0 CGGCGGTGGCGGCGGCCATGGGAGGAGCCTACAACCTCAAGCTCCTCG----CCGCCCTC 96
consensus_15451#2 TTACGTGATTCACCATAAAAGATGCTTA---CAGCCTCAACTTTTTTGAGAACAATATGA 117
** * ** **** * * *
consensus_15451#1 CTCTACTCCGCCGGCCCACGCGATGTCGACGGCCTCGTCGGCGCG---CTGCCGCGGGCC 121
consensus_15451#3 CTCTACTCCGCCGGCCCACGCGATGTCGACGGCCTCGTCGGCGCG---CTGCCGCGGGCC 128
consensus_15451#0 TCCGCGCTCGTCCTCCTCCTCGCCGCCTCGCGCCCCTTCCTCCCGGGGCTCCTGGAGGCG 156
consensus_15451#2 CACGGCTTC-CCGTGTGGTGCAACAAAGATGACAGTGTCAA-GCTCCCCTTCTGCCAAAT 175
* * * * * ** * ** * *
consensus_15451#1 ACCCTGC---CGTTCAGCCCCATG---GACGTCCTGCCCCTCCTGCCGCGGAC-CGCGGC 174
consensus_15451#3 ACCCTGC---CGTTCAGCCCCATG---GACGTCCTGCCCCTCCTGCCGCGGAC-CGCGCC 181
consensus_15451#0 GCCCTCCGCGCCCCCGTCCTCCCGCGCGACCTCCTCCCTCTCCTGCCCTGGCC-GGTGGC 215
consensus_15451#2 AAAGGGCAGGTATCGAATGGAGTTGCCTGGATACACACCATGCAGCCGTACCCTCACATG 235
* * * * * * *** *
consensus_15451#1 CATGGC-GGCGCTCCGCGCT-C-TCCGCGGCGTGTCG------GACATCTTCCCGGTGTT 225
consensus_15451#3 ACTGGC-GGCGCTCCGCGTT-CATCCGCGGCGTGTCG------GACA------------- 220
consensus_15451#0 CCAGCC-GCTGCTCCGCCGC-CTCGCGCTGCGCGGCGCCGCC-GACCTCCTCCCGTCCTT 272
consensus_15451#2 AATGAAAGGTGTCCTTCTCTGCCTCCGAATTATAACAGACCGCGAAATTGCTGATCTGTT 295
* * * * * * ** * **
consensus_15451#1 CGTCGGGGCGGCGTCGGACAGGCCGGGCGCGGTCGGCTCGCGG-CTGGAGTGGAAGGGCG 284
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 CGTCGGCGTCGCGCGGGAGCCAGGTGATGGCGGCGCCCGCGCC-GCCGAGTGGAAGGGCG 331
consensus_15451#2 ACACATTATTACGCCTTGCATTTTGATATATGCTGGCTTTTAGTCTGTACTTTAGCTGTA 355
consensus_15451#1 CCTGCTTCTACGAGAACGAGGCGTGGCTGGTCCTCCACAACGACTCCGG-----CTCCAA 339
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 CCTGCTTCTACGATAACCGGGCGTGGATGGAGTTCCACAACGGGACTGA-----TGGGGG 386
consensus_15451#2 CATACCTGTAGTCTGTAGGTATGCATTGTTTTCTTTGTTGTTACTACGAAGCACTTCCGC 415
consensus_15451#1 GTACGGAGGCGGCACGCTCCACATCAAGACAAACAAAGCTCATAGCTGGACTTGCATAGA 399
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 CCTTGGAGGTGGTACGCTCCATCTCGAGACAAACAAAGCTCATAGCTGGACTTGCATAGA 446
consensus_15451#2 AAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCTCTACCCTTGATGCTACAGG 475
consensus_15451#1 CCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGA 459
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 CCTTTATGTGTTTGCAACACCATATCGTGTTACATGGGATTACTACTTTGTAGGTCGTGA 506
consensus_15451#2 TGTTACCTGCTGTAGGGTTCATATAACTTTCGTCATATAGTAATTGACAATACATGTAGA 535
consensus_15451#1 GCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAA 519
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GCATACCCTTGATTTCAAAGAATGGGAAAGCGAGGCTGAATATGAATATGTAAAACGCAA 566
consensus_15451#2 AAATGTATGTACTTTGTTGTATTGAAAATTTGAAATCTGATCGTAAAAA----------- 584
consensus_15451#1 AGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGA 579
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 AGGAGTATCCATATTCCTGATGCCATCTGGAACAATTGGAACACTTAGAGCACTTTGGGA 626
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 TGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAA 639
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 TGTTTTCCCCCTGTTTACAAATACTCAATGGGGTGAGAATTCAAATCTTGCATTTCTAAA 686
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 GAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGT 699
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GAAGCATATGGGTGCAACCTTCGAGGAACGTCCGAAACCTTGGGTGTCAGAATTAAATGT 746
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 TGACGATATCCACTCTGGAGATTTTTTGGTTTTATCAAAAATTCGTGGGCGCTGGGGTGG 759
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 TGACGATATCCACTCTGGAGATTTTTTGGTTTTATCAAAAATTCGTGGGCGCTGGGGTGG 806
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 TTTTGAAACCCTAGAGAAGTGGGTTACTGGAGCTTAT----------------------- 796
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 TTTTGAAACCCTAGAGAAGTGGGTTACTGGAGCTTATGCTGGCCATACCGCAGTTTGCCT 866
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 CAGGGATTCTGAAGGAAAGCTTTGGGTTGGGGAATCTGGTCATGAGAATGAACAGGGAGA 926
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 AGATATTATTGCTATCTTGCCATGGGAAGAATGGTGGGACTTTGAAGTAAAAAAGGATGA 986
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 TTCCAATCCTCAGATTGCATTACTACCTTTGCATCCAGATTTGCGTGCAAAATTTAATGA 1046
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GACAGCAGCTTGGGAATATGCAAAAAGCATGGATGGAAAACCTTATGGGTACCACAATAT 1106
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GATTTTTAGTTGGATTGATACCATAAGCGACAACTATCCACCGCCATTAGATGCTCATGT 1166
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GGTTGCCTCTGTGATGACTATGTGGAACAAACTTCAACCAGAGTATGCTGCCAACATGTG 1226
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GAAAGAAGCCCTTAACAAACGGCTTGGAACTAAGGGTCTTGATCTACCTGAAATCATAGT 1286
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GGAATCAGAGAAGCGTGGGATGACATTTGACAAATTGCTAACAGTTCCTGAGCAAGATAA 1346
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GTGGGTCTATACTGATGGCCAGTCTGCTTCTTGTGTGGCTTACGTCCTTATGATGTACAA 1406
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GGAGGCTGGACTCTTTGACCCAATTGCCAGCTCTATAGAAGTTACTGAATTCACCATAAA 1466
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 AGATGCTTACAGCCTCAACTTTTTTGAGAACAATATGACACGGCTTCCCGTGTGGTGCAA 1526
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 CAAAGATGACAGTGTCAAGCTCCCCTTCTGCCAAATAAAGGGCAGGTATCGAATGGAGTT 1586
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 GCCTGGATACAACACCATGCAGCCGTACCCTCACATGAATGAAAGGTGTCCTTCTCTGCC 1646
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 TCCGAATTATAACAGACCGCGAAATTGCTGATCTGTTACACATTATTACGCCTTGCATTT 1706
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 TGATATATGCTGGCTTTTAGTCTGTACTTTAGCTGTACATATCACTGTAGTCTGTAGGTA 1766
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 ------------------------------------------------------------
consensus_15451#3 ------------------------------------------------------------
consensus_15451#0 TGCAATTGTTTTCTTTGTTGTTACTACGAAGCAACTTCCGCAAATAAGGAAGATTATGAT 1826
consensus_15451#2 ------------------------------------------------------------
consensus_15451#1 -------------------------------------------------
consensus_15451#3 -------------------------------------------------
consensus_15451#0 TGCGTGAATGTACAGTAAATCTCTACCCTTGATGCTAAAAAAAGGAAAA 1875
consensus_15451#2 -------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||