cluster # 15475

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Oryza sativa
cluster # 15475 cluster # 15475 Sequences # 22 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15475#0 length = 2752 sequences # 16

consensus_15475#1 length = 348 sequences # 4
consensus_15475#2 length = 325 sequences # 2

consensusID : consensus_15475#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 2752
fasta sequence

                              [AAACCCAACAAAAATCGCAGGGGGAGAAAAAATGGCGTNAGAAATCAGCCCCAACCGAAAGAAAAGGCGGAATTTTTTAGCCAAGAAAGCAGCTTTTCTTCATCTTCCTCCCCACTCTCTCTTGTTCCTATAAGGAGAGGAGAGAAGGAGAGAGAGGAGGTGGAGGAGGAGCAATGGCGGCCTGGGCATGGCCGCTCGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAATCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCG-GTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGGCAGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCTTGGGGCTTTCGGGGAATCTGGCCTACAATATGAACACCATGGAGTCCCTAGTTGAGCTTGACATGA-GCCAAAATAATC-TT-GGGGG-TGGCCAAAATATTCAATAC-AATCTTCCAAATAAGAAGC-TTGAGAGGCTCAATCTT-GC-TGGGAACCAGTTTGC-TGGAAATGTGCCATACTCAATTTCCACAATGCCTAAACTTAAGTATCTAAACCTTAATCATAACCAATTACAAGGAAATATGACAGATGTCTTTTCCAACCTTCCAAGTTTATCAACACTTGATCTCTCCTTAAATTCTCTTACTGGTGATCTCCCACAAAGTTTCACTTCTCTGTCAAG-CCTGAAAACTTTGTATCTGCAGAACAACCAATTTACTGGATCAATCAATGTCCTTGCTAATCTTCCCCTGGATAATTTAAATGTGGGAAACAACCGTTTTACTGGTTGGATTCCTAATGAGCTAAAGAAAATAAATAGTCTTCAAACCGATGGCAATTCTTGGAGCACAGGTCCGGCACCACCACCACCACCATTCACAGCACCTCCACCATCACGCAACCGTAAAAAAAGCCCAGGCAGACACTCCAATGGCAGTGGTAGCTCATCAAGTTCTGGTGGAAATTCAGGGTTACGTGCTGGAGCTATAGTAGGAATTATCGTAGCTCTACTGGTCATTGGAGCAGTTGTAGCATTCTTCTTGATAAAGAGAAAACGCAAAGGTACAAGGCAAGAACATGTTGAACAGCGACAGCCTTTCAATTCATACCCTTCCAATGAAGTTAAAGATGTGAAGCCTATACCAGAATCCACCAAGATAGAGGTGGAGCCTTTGCCTTCCCCTGTGGCCGTTAGTCTAAAACCACCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATGATGATGACTTTTCAAACAAGCCTGTTGCAAAGAAAAGTAATTCAGCATCAGTAAAAGCAACAGTTTATTCAGTTGCAGACCTACAGATGGCAACAGATAGTTTCAACA-TGGACAATCTTGTTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAGTGATGGAAAGGTACTAGCTGTCAAGAAACTAAACAGTACTGTGTTGCCAAGCCAATCTTCAGACGATTTCTTTGACTTGGTGTCAAACATTTCAAAGTTGCACCATCCCAATCTCAATGAGCTTGTGGGCTATTGCATGGAGCATGGACAGCACTTGCTAGTTTATGATTTCCACAGAAATGGTTCGCTGCATGATATGCTTCACCTCCCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGCGCTAGACTCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACGCCCCAGCTGCATGACATCGATGCGTTGGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCT-GCCAAATCCCT-GTCCCGTTT-CGCAGACGTCATT-GCGCTGTGTGTCCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTT-GTTCA-GAGGGCC-AACATGACTAGGAG-AATGATCGACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTT-GTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCATGCCTAATGATATCAAAAAACTCATATCTGAAGCTATGTTGCAGTGATATCGATCCAATTTACAGTCTGGTAGATTCTTAAAAGTTTATATACTAAAATTAGTTGCATGATATATACTATTTTCTTTGTAAAAAAAAAAGCCACAGTTGAATATACTCTTGTAAACATAATTTCTTTACAGAGTTTTCCATATGCTATACTACTATAATTGATTGAGAACAAAAAAAAAA]

[+] EMBL OSS10426A            [AAACCCAACAAAAATCGCAGGGGGAGAAAAAATGGCGTNAGAAATCAGCCCCAACCGAAAGAAAAGGCGGAATTTTTTAGCCAAGAAAGCAGCTTTTCTTCATCTTCCTCCCCACTCTCTCTTGTTCCTATAAGGAGAGGAGAGAAGGAGAGAGAGGAGGTGGAGGAGGAGCAATGGCGGCCTGGGCATGGCCGCTCGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAATCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCG GTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK111516             [                                                                                                                         TTGTTCCTATAAGGAGAGGAGAGAAGGAGAGAGAGGAGGTGGAGGAGGAGCAATGGCGGCCTGGGCATGGCCGCTCGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAATCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCG GTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGGCAGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCTTGGGGCTTTCGGGGAATCTGGCCTACAATATGAACACCATGGAGTCCCTAGTTGAGCTTGACATGA GCCAAAATAATC TT GGGGG TGGCCAAAATATTCAATAC AATCTTCCAAATAAGAAGC TTGAGAGGCTCAATCTT GC TGGGAACCAGTTTGC TGGAAATGTGCCATACTCAATTTCCACAATGCCTAAACTTAAGTATCTAAACCTTAATCATAACCAATTACAAGGAAATATGACAGATGTCTTTTCCAACCTTCCAAGTTTATCAACACTTGATCTCTCCTTAAATTCTCTTACTGGTGATCTCCCACAAAGTTTCACTTCTCTGTCAAG CCTGAAAACTTTGTATCTGCAGAACAACCAATTTACTGGATCAATCAATGTCCTTGCTAATCTTCCCCTGGATAATTTAAATGTGGGAAACAACCGTTTTACTGGTTGGATTCCTAATGAGCTAAAGAAAATAAATAGTCTTCAAACCGATGGCAATTCTTGGAGCACAGGTCCGGCACCACCACCACCACCATTCACAGCACCTCCACCATCACGCAACCGTAAAAAAAGCCCAGGCAGACACTCCAATGGCAGTGGTAGCTCATCAAGTTCTGGTGGAAATTCAGGGTTACGTGCTGGAGCTATAGTAGGAATTATCGTAGCTCTACTGGTCATTGGAGCAGTTGTAGCATTCTTCTTGATAAAGAGAAAACGCAAAGGTACAAGGCAAGAACATGTTGAACAGCGACAGCCTTTCAATTCATACCCTTCCAATGAAGTTAAAGATGTGAAGCCTATACCAGAATCCACCAAGATAGAGGTGGAGCCTTTGCCTTCCCCTGTGGCCGTTAGTCTAAAACCACCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATGATGATGACTTTTCAAACAAGCCTGTTGCAAAGAAAAGTAATTCAGCATCAGTAAAAGCAACAGTTTATTCAGTTGCAGACCTACAGATGGCAACAGATAGTTTCAACA TGGACAATCTTGTTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAGTGATGGAAAGGTACTAGCTGTCAAGAAACTAAACAGTACTGTGTTGCCAAGCCAATCTTCAGACGATTTCTTTGACTTGGTGTCAAACATTTCAAAGTTGCACCATCCCAATCTCAATGAGCTTGTGGGCTATTGCATGGAGCATGGACAGCACTTGCTAGTTTATGATTTCCACAGAAATGGTTCGCTGCATGATATGCTTCACCTCCCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGCGCTAGACTCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACGCCCCAGCTGCATGACATCGATGCGTTGGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCT GCCAAATCCCT GTCCCGTTT CGCAGACGTCATT GCGCTGTGTGTCCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTT GTTCA GAGGGCC AACATGACTAGGAG AATGATCGACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTT GTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCATGCCTAATGATAT                                                                                                                                                                                                                         ]
[+] EMBL AY224517             [                                                                                                                                            gGAGAAGGAGAGAGAGGAGGTGGAGGAGGAGCAATGGCGGCCTGGGCATGGCCGCTCGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAATCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCG GTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGGCAGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCTTGGGGCTTTCGGGGAATCTGGCCTACAATATGAACACCATGGAGTCCCTAGTTGAGCTTGACATGA GCCAAAATAATC TT GGGGG TGGCCAAAATATTCAATAC AATCTTCCAAATAAGAAGC TTGAGAGGCTCAATCTT GC TGGGAACCAGTTTGC TGGAAATGTGCCATACTCAATTTCCACAATGCCTAAACTTAAGTATCTAAACCTTAATCATAACCAATTACAAGGAAATATGACAGATGTCTTTTCCAACCTTCCAAGTTTATCAACACTTGATCTCTCCTTAAATTCTCTTACTGGTGATCTCCCACAAAGTTTCACTTCTCTGTCAAG CCTGAAAACTTTGTATCTGCAGAACAACCAATTTACTGGATCAATCAATGTCCTTGCTAATCTTCCCCTGGATAATTTAAATGTGGGAAACAACCGTTTTACTGGTTGGATTCCTAATGAGCTAAAGAAAATAAATAGTCTTCAAACCGATGGCAATTCTTGGAGCACAGGTCCGGCACCACCACCACCACCATTCACAGCACCTCCACCATCACGCAACCGTAAAAAAAGCCCAGGCAGACACTCCAATGGCAGTGGTAGCTCATCAAGTTCTGGTGGAAATTCAGGGTTACGTGCTGGAGCTATAGCAGGAATTATCGTAGCTCTACTGGTCATTGGAGCAGTTGTAGCATTCTTCTTGATAAAGAGAAAACGCAAAGGTACAAGGCAAGAACATGTTGAACAGCGACAGCCTTTCAATTCATACCCTTCCAATGAAGTTAAAGATGTGAAGCCTATACCAGAATCCACCAAGATAGAGGTGGAGCCTTTGCCTTCCCCTGTGGCCGTTAGTCTAAAACCACCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATGATGATGACTTTTCAAACAAGCCTGTTGCAAAGAAAAGTAATTCAGCATCAGTAAAAGCAACAGTTTATTCAGTTGCAGACCTACAGATGGCAACAGATAGTTTCAACA TGGACAATCTTGTTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAGTGATGGAAAGGTACTAGCTGTCAAGAAACTAAACAGTACTGTGTTGCCAAGCCAATCTTCAGACGATTTCTTTGACTTGGTGTCAAACATTTCAAAGTTGCACCATCCCAATCTCAATGAGCTTGTGGGCTATTGCATGGAGCATGGACAGCACTTGCTAGTTTATGATTTCCACAGAAATGGTTCGCTGCATGATATGCTTCACCTCCCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGCGCTAGACTCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACGCCCCAGCTGCATGACATCGATGCGTTGGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCT GCCAAATCCCT GTCCCGTTT CGCAGACGTCATT GCGCTGTGTGTCCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTT GTTCA GAGGGCC AACATGACTAGGAG AATGATCGACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C73758               [                                                                                                                                                                     ccGGAGCAATGGCGNCCTGGGCATGGCTGC GNTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAATCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCGNTTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGG AGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCTTGGGGCTTTCGGGGAATCTGGCCTACAATATGAACANCATGGAGTCCCTAGTTGAGCTTGACATGA GCCAAAATAATC TTNGGGGG TGGCCAAAATATTCAATAC AATCTTCCAAATAAGAAGC TTNAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU064258             [                                                                                                                                                                                 CGGCCTGGGCATGGCCGCTCGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAATCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCG GTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGGCAGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCTTGGGGCTTTCGGGGAATCTGGCCTACAATATGAACACCATGGAGTCCCTAGTTGAGCTTGACATGA GCCAAAATAATC TT GGGGG TGGCCAAAATATTCAATAC AATCTTCCAAATAAGAAGC TTGAGAGGCTCAATCTT GC TGGGAACCAGTTTGC TGGAAATGTGCCATACTCAATTTCCACAATGCCTAAACTTAAGTATCTAAACCTTAATCANAACCAATTACAAGGAAATATGACAGATGTCTTTTCCAACCTTCCAAGTTTATCAACACTTGATCTCTCCTTAAANTCTCTTACTGGTGATTCCCCACAAAGTTTCAANTCTCTGTCAAGCCCTGAAAACTTTGTATCTGCAGAACAACCAATTTACTGGATCAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C73759               [                                                                                                                                                                                  GGCCTNGGCATGGCNGC NGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAATCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCG NTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGGCAGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCTTGGGGCTTTCGGGGAATCTGGCCTACAATATGAACAACATGGAGTCCCTAGTTGAGCTTGACATGAGGCCAAAATAATCTTT GGGGGTTGGCCAAAATATTCAATACAAATTTTCCAAATAAGAAGCTTTAAGNGGGTCAAACTTNGCTTGGGGACCAATTTNCTTGGAAATGTGCCATACTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB636014             [                                                                                                                                                                                                                                                    GGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCAGCCTCAATTCGCCGGGGCAGCTGCGCG GTTGGCAGGTGAATGGCGGTGACCCATGTGGCGCCTCATGGCAGGGCTTCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCTTGGGGCTTTCGGGGAATCTGGCCTACAATATGAACACCATGGAGTCCCTAGTTGAGCTTGACATGA GCCAAAATAATC TT GGGGG TGGCCAAAATATTCAATAC AATCTTCCAAATAAGAAGC TTGAGAGGCTCAATCTT GC TGGGAACCAGTTTGC TGGAAATGTGCCATACTCAATTTCCACAATGCCTAAACTTAAGTATCTAAACCTTAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSR2893A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACGNAAAGGTACAAGTCAAGAACATGTTGAACAGCGACANCGTTNCAATTCATACCCTTCCAATGAAGTTAAAGATGTGAAGCCTATACCAGAATCCACCAAGATAGAGGNGGAGCCTTNGCCTTCCCCTGTGGCCGTTAGTCTAAAACCACCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATGATGATGACTNTTCAAACAAGCCTGTTGCAAAGAAAAGTAATTCAGCATCAGTAAAAGCAACAGTTTATTCAGTTGCAGACCTACAGATGGCAACAGATAGTTTCAACATTGGACAATCTTGTTGGAGAGGGTACTTTTGGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSR3293A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACGCAAAGGTACAAGGCAAGAACATGTTGAACAGCGACANCTTTTCAATTCATACCCTTCCAATGAAGTTAAAGATGTNAAGCCTATACCAGAATCCACCAAGATAGAGGTGGAGCCTTTGCCTTCCCCTGTGGCCGTTAGTCTAAAACCACCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATGATGATGACTTTTCAAACAAGCCTGTTGCAAAGAAAAGTAATTCAGCATCAGTAAAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB658275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATGATGATGACTTTTCAAACAAGCCTGTTGCAAAGAAAAGTATTTCAGCATCAGTAAAAGCAACAGTTTATTCAGTTGCAGACCTACAGATGGCAACAGATAGTTTCAACA TGGACAATCTTGTTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAGTGATGGAAAGGTACTAGCTGTCAAGAAACTAAACAGTACTGTGTTGCCAAGCCAATCTTCAGACGATTTCTTTGACTTGGTGTCAAACATTTCAAAGTTGCACCATCCCAATCTCAATGAGCTTGTGGGCTATTGCATGGAGCATGGACAGCACTTGCTAGTTTATGATTTCCACAGAAATGGTTCGCTGCATGATATGCTTCACCTCCCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGCGCTAGACTCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACGCCCCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C22508               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGCGCTAGACTCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACGCCCCAGCTGCATGACATCGATGCGTTGGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCT GCCAAATCCCT GTCCCGTTTNCGCAGACGTCATT GCGCTGTGTGTCCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTT GTTCA GAGGGCn a                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C22572               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGCGCTAGACTCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACGCCCCAGCTGCATGACATCGATGCGTTGGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCTGGCCAAATCCCTGGTCCCGTTT CGCAGACGTCATTGGCGCTGTGTGTCCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTT GTTCA GAGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C22573               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCT GCCAAATCCCT GTCCCGTTT CGCAGACGTCATT GCGCTGTGTGTCCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTGAGGTGGTGCAAGCGCTGGTCCGCCTT GTTCA GAGGGCC AACATGACTAGGAG AATGATCGACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTT GTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCATGCCTAATGATAACAAAAAA                                                                                                                                                                                                                  ]
[+] EMBL BI806171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCGGAGTTCAGACC CCGATGTCTGA GTGGT CAAGC CTGGTCCCCCTT GTTCA GAGGGCC AACATGACTAGGAG AATGATCGACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTTGGTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCATGCCTAATGATATCAGCTTGCTCATATCTGAAGCTATGTTGCAGTGATATCGATCCAATTTACAGTCTGGTAGATTCTTAAAAGTTTATATACTAAAATTAGTTGCATGATATATACTATTTTCTTTGTAAAAAAAAAAGCCACAGTTGAATATACTCTTGTAAACATAATTTCTTTACAGAGTTTTCCATATGCTATACTACTATAATTGATTGAGAACAAAAAAAAAA]
[+] EMBL AU095505             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTTNGTTCANGAGTGCCAAACATGACTAGGAGAAATGATCGACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTT GTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCATGCCTAATGATATCAAAA                                                                                                                                                                                                                    ]
[+] EMBL C22509               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTNACAGGTTTTGTCNCGTATAATGAAATTACAAGTTTGGCTGCTTCATGCCTAATGATAACAAAAAA                                                                                                                                                                                                                  ]




>consensus_15475#0
AAACCCAACAAAAATCGCAGGGGGAGAAAAAATGGCGTNAGAAATCAGCCCCAACCGAAA
GAAAAGGCGGAATTTTTTAGCCAAGAAAGCAGCTTTTCTTCATCTTCCTCCCCACTCTCT
CTTGTTCCTATAAGGAGAGGAGAGAAGGAGAGAGAGGAGGTGGAGGAGGAGCAATGGCGG
CCTGGGCATGGCCGCTCGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAA
TCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCA
GCCTCAATTCGCCGGGGCAGCTGCGCGGTTGGCAGGTGAATGGCGGTGACCCATGTGGCG
CCTCATGGCAGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCT
TGGGGCTTTCGGGGAATCTGGCCTACAATATGAACACCATGGAGTCCCTAGTTGAGCTTG
ACATGAGCCAAAATAATCTTGGGGGTGGCCAAAATATTCAATACAATCTTCCAAATAAGA
AGCTTGAGAGGCTCAATCTTGCTGGGAACCAGTTTGCTGGAAATGTGCCATACTCAATTT
CCACAATGCCTAAACTTAAGTATCTAAACCTTAATCATAACCAATTACAAGGAAATATGA
CAGATGTCTTTTCCAACCTTCCAAGTTTATCAACACTTGATCTCTCCTTAAATTCTCTTA
CTGGTGATCTCCCACAAAGTTTCACTTCTCTGTCAAGCCTGAAAACTTTGTATCTGCAGA
ACAACCAATTTACTGGATCAATCAATGTCCTTGCTAATCTTCCCCTGGATAATTTAAATG
TGGGAAACAACCGTTTTACTGGTTGGATTCCTAATGAGCTAAAGAAAATAAATAGTCTTC
AAACCGATGGCAATTCTTGGAGCACAGGTCCGGCACCACCACCACCACCATTCACAGCAC
CTCCACCATCACGCAACCGTAAAAAAAGCCCAGGCAGACACTCCAATGGCAGTGGTAGCT
CATCAAGTTCTGGTGGAAATTCAGGGTTACGTGCTGGAGCTATAGTAGGAATTATCGTAG
CTCTACTGGTCATTGGAGCAGTTGTAGCATTCTTCTTGATAAAGAGAAAACGCAAAGGTA
CAAGGCAAGAACATGTTGAACAGCGACAGCCTTTCAATTCATACCCTTCCAATGAAGTTA
AAGATGTGAAGCCTATACCAGAATCCACCAAGATAGAGGTGGAGCCTTTGCCTTCCCCTG
TGGCCGTTAGTCTAAAACCACCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATG
ATGATGACTTTTCAAACAAGCCTGTTGCAAAGAAAAGTAATTCAGCATCAGTAAAAGCAA
CAGTTTATTCAGTTGCAGACCTACAGATGGCAACAGATAGTTTCAACATGGACAATCTTG
TTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAGTGATGGAAAGGTACTAG
CTGTCAAGAAACTAAACAGTACTGTGTTGCCAAGCCAATCTTCAGACGATTTCTTTGACT
TGGTGTCAAACATTTCAAAGTTGCACCATCCCAATCTCAATGAGCTTGTGGGCTATTGCA
TGGAGCATGGACAGCACTTGCTAGTTTATGATTTCCACAGAAATGGTTCGCTGCATGATA
TGCTTCACCTCCCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTG
CGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCC
ACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTG
ATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTG
GATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATA
GCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGCGCTAGAC
TCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACGCCCCAGCTGCATGACATCGATGCGT
TGGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCTGCCAAATCCCTGTCCCGTT
TCGCAGACGTCATTGCGCTGTGTGTCCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTG
AGGTGGTGCAAGCGCTGGTCCGCCTTGTTCAGAGGGCCAACATGACTAGGAGAATGATCG
ACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAACATGTTG
AGACAGATCTTGTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTC
CTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAA
CTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTT
CATGCCTAATGATATCAAAAAACTCATATCTGAAGCTATGTTGCAGTGATATCGATCCAA
TTTACAGTCTGGTAGATTCTTAAAAGTTTATATACTAAAATTAGTTGCATGATATATACT
ATTTTCTTTGTAAAAAAAAAAGCCACAGTTGAATATACTCTTGTAAACATAATTTCTTTA
CAGAGTTTTCCATATGCTATACTACTATAATTGATTGAGAACAAAAAAAAAA

consensusID : consensus_15475#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 348
fasta sequence

                              [CCGATGTCTGANGTGGTGCAAGCGCTGGTCCGCCTTGTTCAGNGGGCCAACATGACTAGGAGAATG-ATCGNCGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTTGTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCATGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU095720             [CCGATGTCTGANGTGGTGCAAGCGCTGGTCCGCCTTGTTCAGAGGGCCAACATGACTAGGAGAATG ATCGNCGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTTGTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCA     AAAAAAAAAAAAAAA                ]
[+] EMBL AU094665             [      TCTGAGGTGGTGCAAGCGCTGGTCCNCCTTGTTCAGNGGGCCAACATGACTAGGAGAATG ATCGNCGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTTGTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCATGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C99542               [                TGC ANCGCTGGTCC CCTTGTTCAGNGGGCCAAC TGA TAGGAGANTGTATCGACGGCGAAGAGGGTTCTCGAAGACC GATGACCAGGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTTGTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCATGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CB682273             [                                                                                                 GATGCCCTTGACCAGGAGTTCGTGTAACATGTTGAGACAGATCTTGTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATATGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGTTTGGCTGCTTCAT                                   ]




>consensus_15475#1
CCGATGTCTGANGTGGTGCAAGCGCTGGTCCGCCTTGTTCAGNGGGCCAACATGACTAGG
AGAATGATCGNCGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTG
TAACATGTTGAGACAGATCTTGTGTTGAACCTGCATCCTATCTCTCTGGTGACTGTAATA
TGTTTGGTTCCTAGAACCTGATGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAAATACT
GAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTACAAGT
TTGGCTGCTTCATGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_15475#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 325
fasta sequence

                              [CCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C22550               [CCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C22551               [CCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTANACCCT                                                     ]




>consensus_15475#2
CCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCT
GCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTC
AAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTT
GCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCC
CCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGTTGTCTCAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15475#0      AAACCCAACAAAAATCGCAGGGGGAGAAAAAATGGCGTNAGAAATCAGCCCCAACCGAAA 60
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      GAAAAGGCGGAATTTTTTAGCCAAGAAAGCAGCTTTTCTTCATCTTCCTCCCCACTCTCT 120
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CTTGTTCCTATAAGGAGAGGAGAGAAGGAGAGAGAGGAGGTGGAGGAGGAGCAATGGCGG 180
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CCTGGGCATGGCCGCTCGTCTTCCTCGTCTCGTGCTGCTGTTCTTGGACCCAGCGGCGAA 240
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TCTTGGTTGCTGCGACCACTGACGCCAATGATGTTACTGTCCTCAATGCGCTATTCACCA 300
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      GCCTCAATTCGCCGGGGCAGCTGCGCGGTTGGCAGGTGAATGGCGGTGACCCATGTGGCG 360
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CCTCATGGCAGGGCATCACCTGCTCTGGATCATCAGTCACAGCAATTAAATTGCCGAGCT 420
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TGGGGCTTTCGGGGAATCTGGCCTACAATATGAACACCATGGAGTCCCTAGTTGAGCTTG 480
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      ACATGAGCCAAAATAATCTTGGGGGTGGCCAAAATATTCAATACAATCTTCCAAATAAGA 540
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      AGCTTGAGAGGCTCAATCTTGCTGGGAACCAGTTTGCTGGAAATGTGCCATACTCAATTT 600
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CCACAATGCCTAAACTTAAGTATCTAAACCTTAATCATAACCAATTACAAGGAAATATGA 660
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CAGATGTCTTTTCCAACCTTCCAAGTTTATCAACACTTGATCTCTCCTTAAATTCTCTTA 720
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CTGGTGATCTCCCACAAAGTTTCACTTCTCTGTCAAGCCTGAAAACTTTGTATCTGCAGA 780
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      ACAACCAATTTACTGGATCAATCAATGTCCTTGCTAATCTTCCCCTGGATAATTTAAATG 840
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TGGGAAACAACCGTTTTACTGGTTGGATTCCTAATGAGCTAAAGAAAATAAATAGTCTTC 900
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      AAACCGATGGCAATTCTTGGAGCACAGGTCCGGCACCACCACCACCACCATTCACAGCAC 960
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CTCCACCATCACGCAACCGTAAAAAAAGCCCAGGCAGACACTCCAATGGCAGTGGTAGCT 1020
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CATCAAGTTCTGGTGGAAATTCAGGGTTACGTGCTGGAGCTATAGTAGGAATTATCGTAG 1080
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CTCTACTGGTCATTGGAGCAGTTGTAGCATTCTTCTTGATAAAGAGAAAACGCAAAGGTA 1140
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CAAGGCAAGAACATGTTGAACAGCGACAGCCTTTCAATTCATACCCTTCCAATGAAGTTA 1200
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      AAGATGTGAAGCCTATACCAGAATCCACCAAGATAGAGGTGGAGCCTTTGCCTTCCCCTG 1260
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TGGCCGTTAGTCTAAAACCACCTCCTAAGATTGAGCGCAACCAGTCATTTGATGACGATG 1320
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      ATGATGACTTTTCAAACAAGCCTGTTGCAAAGAAAAGTAATTCAGCATCAGTAAAAGCAA 1380
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CAGTTTATTCAGTTGCAGACCTACAGATGGCAACAGATAGTTTCAACATGGACAATCTTG 1440
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAATTCAGTGATGGAAAGGTACTAG 1500
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CTGTCAAGAAACTAAACAGTACTGTGTTGCCAAGCCAATCTTCAGACGATTTCTTTGACT 1560
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TGGTGTCAAACATTTCAAAGTTGCACCATCCCAATCTCAATGAGCTTGTGGGCTATTGCA 1620
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TGGAGCATGGACAGCACTTGCTAGTTTATGATTTCCACAGAAATGGTTCGCTGCATGATA 1680
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TGCTTCACCTCCCAGATGAATATAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTG 1740
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      CGTTAGGTTCTGCACGGGCACTAGAGTATCTTCATGAAATTTGTTCTCCTTCTATTATCC 1800
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      ACAAGAACTTCAAGTCATCTAATATCTTGCTGGACACCGAGTTCAATCCTCATGTTTCTG 1860
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      ATGCTGGACTTGCCAGCAGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTG 1920
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      GATATAGTGCCCCTGAAGTTGACATGACTGGGCAGTATACCCTCAAGAGTGATGTTTATA 1980
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      GCTTTGGAGTTGTCATGCTGGAGCTCTTGACAGGCCGCAAACCATTTGACAGCGCTAGAC 2040
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TCCGGACAGAGCAGTCACTTGTCCGGTGGGCAACGCCCCAGCTGCATGACATCGATGCGT 2100
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TGGACCGGATGGTCGACCCAGCGCTCAAGGGCCTGTACCCTGCCAAATCCCTGTCCCGTT 2160
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TCGCAGACGTCATTGCGCTGTGTGTCCAGCCTGAGCCGGAGTTCAGACCGCCGATGTCTG 2220
consensus_15475#1      --------------------------------------------------CCGATGTCTG 10
consensus_15475#2      -------------------------------------------------CCAGATGAATA 11
                                                                         * ****  * 

consensus_15475#0      AGGTGGTGCAAGC-GCTGGTCCGCCT-TGTTCAGA--------GGGCCAACATGACTAGG 2270
consensus_15475#1      ANGTGGTGCAAGC-GCTGGTCCGCCT-TGTTCAGN--------GGGCCAACATGACTAGG 60
consensus_15475#2      TAGCAAACCACTCAGCTGGAATTCTCGTGTTAAGATTGCGTTAGGTTCTGCACGGGCACT 71
                         *     **  * *****    *   **** **         **  *  ** *   *  

consensus_15475#0      AGAATGATCGACGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTG 2330
consensus_15475#1      AGAATGATCGNCGGCGAAGAGGGTTCTCGAAGACCAGATGACCAGGACCAGGAGTTCGTG 120
consensus_15475#2      AGAGT-ATCTTCA-TGAAATTTGTTCTCCTTCTATTATCCACAAGAACTTCAAGT-CATC 128
                       *** * ***  *   ***    ******            ** ** **    *** * * 

consensus_15475#0      TAACATGTTGAGACAGATCTTGTGTTGAACCTGCATCCTATCTCT-CTGG---TGACTGT 2386
consensus_15475#1      TAACATGTTGAGACAGATCTTGTGTTGAACCTGCATCCTATCTCT-CTGG---TGACTGT 176
consensus_15475#2      TAATATCTTGC--TGGACACCGAGTTCAATCCTCATGTTTCTGATGCTGGACTTGCCAGC 186
                       *** ** ***     **    * *** ** *  ***  *     * ****   ** * * 

consensus_15475#0      AATATGTTTGGTTCCTAGAACCTGA-TGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAA 2445
consensus_15475#1      AATATGTTTGGTTCCTAGAACCTGA-TGCAGATGGGGAAAGGGGAAAAATGGAGGGGGAA 235
consensus_15475#2      AGTGTTCCTGATTCTGAATTCCAGGCTTCAGATCAGGGTTCTGGATATAGTGCCCCTGAA 246
                       * * *   ** ***  *   ** *  * *****  **     *** * *  *     ***

consensus_15475#0      ATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTA 2505
consensus_15475#1      ATACTGAACTTTCAACTCATCAGTACATATTCACAGGTTTTGTCTCGTATAATGAAATTA 295
consensus_15475#2      GT--TGA---CATGACTGGGCAGTATACCCTCAAGAGTGTTGTCTCAAAAAAAAAAA--- 298
                        *  ***       ***   ***** *   ***   ** *******  * **  ***   

consensus_15475#0      CAAGTTTGGCTGCTTCATGCCTAATGATATCAAAAAACTCATATCTGAAGCTATGTTGCA 2565
consensus_15475#1      CAAGTTTGGCTGCTTCATGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------- 348
consensus_15475#2      ----------------------AAAAAAAAAAAAAAAAAAAAAAAAAAA----------- 325
                                             **  * *  ******   * *    **           

consensus_15475#0      GTGATATCGATCCAATTTACAGTCTGGTAGATTCTTAAAAGTTTATATACTAAAATTAGT 2625
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      TGCATGATATATACTATTTTCTTTGTAAAAAAAAAAGCCACAGTTGAATATACTCTTGTA 2685
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      AACATAATTTCTTTACAGAGTTTTCCATATGCTATACTACTATAATTGATTGAGAACAAA 2745
consensus_15475#1      ------------------------------------------------------------
consensus_15475#2      ------------------------------------------------------------
                                                                                   

consensus_15475#0      AAAAAAA 2752
consensus_15475#1      -------
consensus_15475#2      -------