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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15488#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 1151 fasta sequence
[ATGATGCATTGGTGGGCAAATGTATTAAAATTAAATCTGGTCCTTACAAGGGGTACCGTGGCCGTGTTAAAGAGGTGACTGGCGTGCTTGTGCGTGTGGAGCTTGATTCGTTAATGAAGATTGTGACAGTTAAAAGAGATGATATTGCTGATACACCTACTGTTGCAACACCATTCCGTGAACCTCGTTATCCGTTGGGTGGTGAAACTCCAATGCACCCATCTCGAACACCGCTTCATCCTTACCAGACACCAATGCGGGACCCTGGAGCAACCCCAATACACGATGGCATGCGGACTCCTATGCGTCGTGGCTGGGCT-CCTATGAGTCCT-CCGAGGGATAACTGGGAAGAAGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA-GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC-TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTT--CCTGGT--ACACCT-GGTGGTCAACCGATGACTCCAGGCAATGTTGGAATGGACA-TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC-GCGTCGCCCTTGGGTCATCA-GGTAATGGTGAGATCGTGACGGTTCTTCCA-ACCG-AGCTCGAGGTTATT-CGGCC-AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT-AGGTATAGATGGT-TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT-CAAGAT-CTT-AGATAT-GGT-GAT-TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT-TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC-AGATACCCTTTGTAGT-CAATAAAACGTTTTGTTATTTATTCCA-TTATTTAGTTGTATCCAGATTTTGACATCGAAAGAAAACTTGCCTTAAGAAAAAAAAAAAAAAAAAAGA]
[+] EMBL CB648294 [ATGATGCATTGGTGGGCAAATGTATTAAAATTAAATCTGGTCCTTACAAGGGGTACCGTGGCCGTGTTAAAGAGGTGACTGGCGTGCTTGTGCGTGTGGAGCTTGATTCGTTAATGAAGATTGTGACAGTTAAAAGAGATGATATTGCTGATACACCTACTGTTGCAACACCATTCCGTGAACCTCGTTATCCGTTGGGTGGTGAAACTCCAATGCACCCATCTCGAACACCGCTTCATCCTTACCAGACACCAATGCGGGACCCTGGAGCAACCCCAATACACGATGGCATGCGGACTCCTATGCGTCGTGGCTGGGCT CCTATGAGTCCT CCGAGGGATAACTGGGAAGAAGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCG ]
[+] EMBL CF323453 [ GCAAATGTATTAAAATTAAATCTGGTCCTTACAAGGGGTACCGTGGCCGTGTTAAAGAGGTGACTGGCGTGCTTGTGCGTGTGGAGCTTGATTCGTTAATGAAGATTGTGACAGTTAAAAGAGATGATATTGCTGATACACCTACTGTTGCAACACCATTCCGTGAACCTCGTTATCCGTTGGGTGGTGAAACTCCAATGCACCCATCTCGAACACCGCTTCATCCTTACCAGACACCAATGCGGGACCCTGGAGCAACCCCAATACACGATGGCATGCGGACTCCTATGCGTCGTGGCTGGGCT CCTATGAGTCCT CCGAGGGATAACTGGGAAGAAGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCAGGGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCACTTCCTGTAGGTCAACCAATGACACCGAATTCTGCCTC ]
[+] EMBL CB681498 [ ATTAAAATTAAATCTGGTCCTTACAAGGGGTACCGTGGCCGTGTTAAAGATGTGACTGGCGTGCTTGTGCGTGTGGAGCTTGATTCTTTAATGAAGATTGTGACAGTTAAAAGAGATGATATTGCTGATACACCTACTGTTGCAACACCATTCCGTGAACCTCAATATCCGTTGGGTGGTGAAACTCCAATGCACCCATCTCGAACACCGCTTCATCCTTACCAGACACCAATGCGGGACCCTGGAGCAACCCCAATACACAATGGCATGCGGACTCCTATGCGTCTTGGCTGGGCT CCTATGAGTCCT CCGAGGGATAACTGGGAATAACGAAATCCTGCTACTTGGGGAATCAGTCCAGCTTACCATCCATGAACTCCACCAGCTCAGTCATATGAAG ]
[+] EMBL AK059092 [ ATCTGGTCCTTACAAGGGGTACCGTGGCCGTGTTAAAGAGGTGACTGGCGTGCTTGTGCGTGTGGAGCTTGATTCGTTAATGAAGATTGTGACAGTTAAAAGAGATGATATTGCTGATACACCTACTGTTGCAACACCATTCCGTGAACCTCGTTATCCGTTGGGTGGTGAAACTCCAATGCACCCATCTCGAACACCGCTTCATCCTTACCAGACACCAATGCGGGACCCTGGAGCAACCCCAATACACGATGGCATGCGGACTCCTATGCGTCGTGGCTGGGCT CCTATGAGTCCT CCGAGGGATAACTGGGAAGAAGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTT CCTGGT ACACCT GGTGGTCAACCGATGACTCCAGGCAATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGT ]
[+] EMBL CF324030 [ TTAAAGAGGTGACTGGCGTGCTTGTGCGTGTGGAGCTTGATTCGTTAATGAAGATTGTGACAGTTAAAAGAGATGATATTGCTGATACACCTACTGTTGCAACACCATTCCGTGAACCTCGTTATCCGTTGGGTGGTGAAACTCCAATGCACCCATCTCGAACACCGCTTCATCCTTACCAGACACCAATGCGGGACCCTGGAGCAACCCCAATACACGATGGCATGCGGACTCCTATGCGTCGTGGCTGGGCT CCTATGAGTCCT CCGAGGGATAACTGGGAAGAAGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTT CCTGGT ACACCT GGTGGTCAACCGATGACTCCAGGCAATGTTGGAATGGA ]
[+] EMBL BE530929 [ TTGATTCGTTAATGAAGATTGTGACAGTTAAAAGAGATGATATTGCTGATACACCTACTGTTGCAACACCATTCCGTGAACCTCGTTATCCGTTGGGTGGTGAAACTCCAATGCACCCATCTCGAACACCGCTTCATCCTTACCAGACACCAATGCGGGACCCTGGAGCAACCCCAATACACGATGGCATGCGGACTCCTATGCGTCGTGGCTGGGCT CCTATGAGTCCT CCGAGGGATAACTGGGAAGAAGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTC ]
[-] EMBL CB676425 [ TACACGATGGCATGCGGACTCCTATGCGTCGTGGCTGGGCT CCTATGAGTCCT CCGAGGGATAACTGGGAAGAAGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTT CCTGGT ACACCT GGTGGTCAACCGATGACTCCAGGCAATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTT TAAC GGGTACCCTTTGTAGT CAATAAAACGTTTTGTTAT ]
[-] EMBL CB681499 [ CGGACTCCTATGCGTCGTGGCTGGGCT CCTATGAGTCCT CCGAGGGATAACTGGGAAGAAGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTT CCTGGT ACACCT GGTGGTCAACCGATGACTCCAGGCAATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCCA TTAaaaaaaaga ]
[-] EMBL CB668948 [ CTGGGCTCCCTATGAGTCCTCCCGAGGGATAACTGGGAAGAAGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTT CCTGGT ACACCT GGTGGTCAACCGATGACTCCAGGCAATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC AAAGGCCCTTTGTAG ]
[-] EMBL CB672985 [ GAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTT CCTGGT ACACCT GGTGGTCAACCGATGACTCCAGGCAATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCCA TTATTTAGTTGTATCCAGATTTTGACATCGAAAAAAAAga ]
[-] EMBL CB648295 [ GGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGGTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTT CCTGGT ACACCT GGTGGTCAACCGATGACTCCAGGCAATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAACCTGGCGAGTTGAGATGGATGTATATTT TGTCCGAGTCCATGGTATAGCCAAATGTTTGTAAC AGATACCGGTCGTAGT CAATAAAACGTTTTGTTATTTATTCCA TTAaaggga ]
[-] EMBL CB671674 [ TCCAGCTTACCAGCCAGGAACTCCACCAGCTCGGCCATATGAAGCACCCACACCTGGATCA GGGTGGGCAAATACGCCAGGAGTTAGCTATAATGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTCCAC TCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTT CCTGGT ACACCT GGTGGTCAACCGATGACTCCAGGCAATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTTTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTTTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCCA TTATTTAGTTGTATCCAGATTTTGACATCGAAAGAAAACTTGCCTTAAGAAAAAAAAAAAAAAAAAAGA]
[+] EMBL BM421664 [ TCTG CTCGTACCTT CCTGGT ACACCT GGTGGTCAACCGATGACT CAGGCAATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTT CGGATGGATCTTGTCAGCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCC AATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCaa aaa ]
[+] EMBL BM038611 [ cggtcACCTTTCCCTGGTTAACACCTGGGTGTTC ACCGATGACT CA GC ATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGTTGAAGGTAACT GCTGTTGCCAGATGTTTTGGTTAATGT TTGA GGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCC ACCG AGCTCGAGGTTATT CGGCC CAAGAAGAGCGAC AGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGC TTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCC AACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCC AATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCCA aaaaaaaaa ]
[+] EMBL BM421403 [ GGTCAACCGATGACTCCA GCAATGTTGGAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACT GCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCGNAGCTCGAGGTTATT CGGCC CAAGAAGAGCGACAAGATCAAGATAATGAACGGC ATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCC AACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCC AATGTTTGTAACAAGATACCCTTTGTAGTCCAATAAAACGTTTTGTTATTTATTCaa aaa ]
[+] EMBL BM419439 [ ATGACTCCAGGCAATGTTGGAATGGACACTAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCC ACCG AGCTCGAGGTTATT CGGCCNNAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCNAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCCA TTATTTAGTTGTATCCAGATTTTGACA AAAAAAAAa ]
[+] EMBL AT003396 [ GAATGGACA TAATGTCGCCTATAATAGGTGGTGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCCA TTATTTAGTTGTATCCAGATTTTGACATCGAAAGAAAACTTGCCTTAAGAAAAAAAAAA ]
[+] EMBL BM418620 [ ATA GTGGTGAAGTTGAAGGTAACT GCT TTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCACGGTAATGGTGAGATCGTGACGGTTCTTCCACACCG AGCTCGAGGTTATTGCGGCC CAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCATGAGGTATAGATGGTGTCCGACGGCATTTGGAAGCTTGATGACACATACGAAGTGCAAGATGCTTGAGATATGGGTGGATGTTTGGCCNAACTGGCGAGTTGAGATGGATGTATATTTNTGNACGAGTCCATCGTATA CC AATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCCACTTATTTAGTTGTATCCAGATTTTGACA AAAAAAAAa ]
[+] EMBL BE230486 [ TGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGATGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCCA TTATTTAGTTGTATCCAGATTTTGACATCGAAAGAAAACTTG ]
[+] EMBL BE229866 [ TGCCAGATGTTTTGGTTAATATATTGAGGGCAGGCGATGATGGTCACGGCGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTC GCGTCGCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCA ACCG AGCTCGAGGTTATT CGGCC AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCCAAATGTTTGTAAC AGATACCCTTTGTAGT ]
[+] EMBL BI808769 [ GCCCTTGGGTCATCA GGTAATGGTGAGATCGTGACGGTTCTTCCACACCG AGCTCGAGGTTATT CGGCC AAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCTCAT AGGTATAGATGGT TCCGACGGCATTGTGAAGCTTGATGACACATACGAAGT CAAGAT CTT AGATAT GGT GAT TTTGGCCCAACTGGCGAGTTGAGATGGATGTATATTT TGTACGAGTCCATCGTATAGCC AATGTTTGTAAC AGATACCCTTTGTAGT CAATAAAACGTTTTGTTATTTATTCCA TTATTTAGTTGTATCCAGATTTTGACATCGAAAGAAAACTTGCCTTAAGAAAAAA ]
consensusID : consensus_15488#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 213 fasta sequence
[ATGATGCATTGGTGGGCAAATGTATTAAAATTAAATCTGGTCCTTACAAGGGGTACCGTGGCCGTGTTAAAGAGGTGACTGGCGTGCTTTGTGCCGTGTGGAGCTTGATTTCGTTAATGAAAGATTGNGACAGTTAAAAGAGATGATATTGGTGATACACCTACTGGTTGCAACACCCATTTCCGNGAACCCTCGGTATTCCGTGGGTGGGGA]
[+] EMBL AU184568 [ATGATGCATTGGTGGGCAAATGTATTAAAATTAAATCTGGTCCTTACAAGGGGTACCGTGGCCGTGTTAAAGAGGTGACTGGCGTGCTTTGTGCCGTGTGGAGCTTGATTTCGTTAATGAAAGATTGNGACAGTTAAAAGAGATGATATTGGTGATACACCTACTGGTTGCAACACCCATTTCCGNGAACCCTCGGTATTCCGTGGGTGGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15488#0 ATGATGCATTGGTGGGCAAATGTATTAAAATTAAATCTGGTCCTTACAAGGGGTACCGTG 60
consensus_15488#1 ATGATGCATTGGTGGGCAAATGTATTAAAATTAAATCTGGTCCTTACAAGGGGTACCGTG 60
************************************************************
consensus_15488#0 GCCGTGTTAAAGAGGTGACTGGCGTGCTT-GTGC-GTGTGGAGCTTGATT-CGTTAATGA 117
consensus_15488#1 GCCGTGTTAAAGAGGTGACTGGCGTGCTTTGTGCCGTGTGGAGCTTGATTTCGTTAATGA 120
***************************** **** *************** *********
consensus_15488#0 A-GATTGTGACAGTTAAAAGAGATGATATTGCTGATACACCTACTG-TTGCAACACCA-- 173
consensus_15488#1 AAGATTGNGACAGTTAAAAGAGATGATATTGGTGATACACCTACTGGTTGCAACACCCAT 180
* ***** *********************** ************** **********
consensus_15488#0 TTCCGTGAACC-TCGTTATCCGTTGGGTGGTGAAACTCCAATGCACCCATCTCGAACACC 232
consensus_15488#1 TTCCGNGAACCCTCGGTATTCCGTGGGTGGGGA--------------------------- 213
***** ***** *** *** * ******* **
consensus_15488#0 GCTTCATCCTTACCAGACACCAATGCGGGACCCTGGAGCAACCCCAATACACGATGGCAT 292
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 GCGGACTCCTATGCGTCGTGGCTGGGCTCCTATGAGTCCTCCGAGGGATAACTGGGAAGA 352
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 AGGAAATCCTGCTACTTGGGGAAGCAGTCCAGCTTACCAGCCAGGAACTCCACCAGCTCG 412
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 GCCATATGAAGCACCCACACCTGGATCAGGGTGGGCAAATACGCCAGGAGTTAGCTATAA 472
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 TGACGCTCCAACTCCCAGGGAGAGCAACTACGGAAATGCTCCAAGCCCATATGTGCCTTC 532
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 CACTCCTGTAGGTCAACCAATGACACCGAATTCTGCCTCGTACCTTCCTGGTACACCTGG 592
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 TGGTCAACCGATGACTCCAGGCAATGTTGGAATGGACATAATGTCGCCTATAATAGGTGG 652
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 TGAAGGTGAAGGTAACTGGCTGTTGCCAGATGTTTTGGTTAATGTGTTGAGGGCAGGCGA 712
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 TGATGGTCCTGGTGTGGTGAGGGAAGTTCTTGCGGATGGATCTTGTCGCGTCGCCCTTGG 772
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 GTCATCAGGTAATGGTGAGATCGTGACGGTTCTTCCAACCGAGCTCGAGGTTATTCGGCC 832
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 AAAGAAGAGCGACAAGATCAAGATAATGAACGGCAATTTCCGTGGATACTCTGGAAAGCT 892
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 CATAGGTATAGATGGTTCCGACGGCATTGTGAAGCTTGATGACACATACGAAGTCAAGAT 952
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 CTTAGATATGGTGATTTTGGCCAAACTGGCGAGTTGAGATGGATGTATATTTTGTACGAG 1012
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 TCCATCGTATAGCCAAATGTTTGTAACAGATACCCTTTGTAGTCAATAAAACGTTTTGTT 1072
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 ATTTATTCCATTATTTAGTTGTATCCAGATTTTGACATCGAAAGAAAACTTGCCTTAAGA 1132
consensus_15488#1 ------------------------------------------------------------
consensus_15488#0 AAAAAAAAAAAAAAAAAGA 1151
consensus_15488#1 -------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||