These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15506#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 829 fasta sequence [GAGTAGAAAGACCCACTCCAACCCCCCCTGCGCCATTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTC-GCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC-GACTACTCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCGTTCGGGGC-GCAGTGCAACGCCG-CCGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTC-GCCGTCGGCTTCGTGCTGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTA-GTGGACCCCGATCGAGCCATAGCAGG-CAGGGCCCAGCCAGCCAT-GGCTGGTTGGCCCC-GATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGA-TTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGG-AGA--CTGCAAAAAAAAAAAAAAAAAAACCTAGGGGCCGACCCCATGCCTATGACGATTACCCTCCTGGCGGTAAAGCGATGGAACCCGGTCCATATGCTGGCATCCCTCCATGGAACAAAGCCCAGCTCATTCACGAAGAGAGCCGCGCTACACAGGGTGGGGACATCGCACCCTTTTTTTTTTCGTCGACAGGCTGGTGGGTGTCCAAATTGACCTAAAGGG] [+] EMBL CF332587 [GAGTAGAAAGACCCACTCCAACCCCCCCTGCGCCATTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTC GCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC GACTA ] [+] EMBL CF299796 [ CTCCAACCCCCCCTGCGCCATTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTC GCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC GACTACTCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCGTTCGGGGC GCAGTGCAACGCCG CCGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTC GCCGTCGGCTTCGTGCTGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTA GTGGACCCCGATCGAGCCATAGCAGG CAGGGCCCAGCCAGCCATGGGCTGGTTGGCCCC GATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGA TTGGTGAATACCCTTGGAA ] [+] EMBL CF335884 [ CTCCAACCCCCCCTGCGCCATTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTC GCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC GACTAC ] [+] EMBL CF333472 [ CCAACCCCCCCTGCGCCATTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTC GCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC GACTACTCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCGTTCGGGGC GCAGTGCAACGCCG CCGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTC GCCGTCGGCTTCGTGCT ] [+] EMBL CF334708 [ CCAACCCCCCCTGCGCCATTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTC GCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC GACTACTCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCGTTCGGGGC GCAGTGCAACGCCG CCGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTC GCCGTCGGCTTCGTGCTGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTA GTGGACCCCGATCGAGCCATAGCAGG CAGGGCCCAGCCAGCCATGGGCTGGTTGGCCCC GATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGA TTGGTGAAT ] [+] EMBL CF298321 [ CCTGCGCCATTGCCGGCC CACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTC GCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGTG GATG ACTTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC G ] [+] EMBL CF300102 [ CCATTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTC GCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC GACTACTCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCGTTCGGGGC GCAGTGCAACGCCG CCGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTC GCCGTCGGCT ] [+] EMBL AW155247 [ TTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTC GCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC GACTACTCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCGTTCGGGGC GCAGTGCAACGCCG CCGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTC GCCGTCGGCTTCGTGCTGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTA GTGGACCCCGATCGAGCCATAGCAGG CAGGGCCCAGCCAGCCAT GGCTGG TGGCCCC GATAAGCCG GATATAT ACTGTGATG ATG TTCGA TAAAA TTGC TTCG TTTG A CCATGACGA T GTG ATACCC TGG ACG AAC CGTTT GAGG AGA CTGCAAAAAANAAAAAAAAAAAACCTAGGGGCCGACCCCATGCCTATGACGATTACCCTCCTGGCGGTAAAGCGATGGAACCCGGTCCATATGCTGGCATCCCTCCATGGAACAAAGCCCAGCTCATTCACGAAGAGAGCCGCGCTACACAGGGTGGGGACATCGCACCCTTTTTTTTTTCGTCGACAGGCTGGTGGGTGTCCAAATTGACCTAAAGGG] [+] EMBL BQ906345 [ TGGCGTCGCTGTCCATGNCCACAACGCTNCCGTCAGCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCC GACTACTCGTTCGCCAAGGTGGTGGCCAAGTTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCGTTCGGGGCAGCAGTGCAACGCCGCCCGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCAGCCGTCGGCTTCGTGCTGCTCCGGGTGGA GCGCCCGTCGAGGAGTCGGAGTATGTGGACCCCGATCGAGCCATAGCAGGCCAGGGCCCGGCCAGCCAT GGCTGGTTGCCCCCAGATAACCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGATTTGGTGAATACCCTTGGAACGAAACACGTTTTGGAG C CAAAAAAAAAA ] [-] EMBL CF300101 [ GGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCCGGACTACTCGTTCGCCAAGGTGGTGGCCAAGTTGAGCCCCGCCGGCGGGAAGACCCGCGGCGGCGCGTTCGGGGC GCAGTGCAACGCCG CCGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGTTCGTGCTCGTCGGCGTC CCCGTCGGCTTCGTGCTGCTCCGGGTGGAGGCGCCCGTCGAGGAGTCGGAGTA GTGGACCCCGATCGAGCCATAGCAGG CAGGGCCCAGCCAGCCAT GGCTGGTTGGCCCC GATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGA TTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGGCAGAACCTGCAAAAAAAAAAAAAAA ] consensusID : consensus_15506#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 632 fasta sequence [GTCCGCCCTTGCGCCATTGCCGGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTCGCTGGCCGGCGCCGCACCGGCGGCGAG-GAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCCGACTA-C-TCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCG-TTCGGGGCGCAGTGCAACGCCGC-CGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGC-TTCGTGC-TGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAG-TGGACCCCGA-TCGAGCCA-TAGCAGGCAGGGCCCAGCCAGCCATGGCTGGTTGG-CCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGGCAGAACCTGCAAATGCAATTGGTTTTTCAGCTGTAAAAAAAAA] [+] EMBL AU082990 [GTCCGCCCTTGCGCCATTGCCGGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTCGCTGGCCGGCGCCGCACCGGCGGCGAG GAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCCGACTA C TCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCG TTCGGGGCGCAGTGCAACGCCGC CGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGC TTCGTGC TGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAG TGGACCCCGA TCGAGCCA TAGCAGGCAGGGCCCAGCCAGCCATGGCTGGTTGG CCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGGCAGAACCTGCAAATGCAATTGGTTTTTCAGCTGTACAAAAA ] [+] EMBL CA754323 [ GGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTCGCTGGCCGGCGCCGCACCGGCGGCGAG GAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCCGACTA C TCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCG TTCGGGGCGCAGTGCAACGCCGC CGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGC TTCGTGC TGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAG TGGACCCCGA TCGAGCCA TAGCAGGCAGGGCCCAGCCAGCCATGGCTGGTTGG CCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGGCAGAACCTGCCAATGCAATTGGTTTTTCAGCTGTtac ] [+] EMBL AK058858 [ CACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTCGCTGGCCGGCGCCGCACCGGCGGCGAG GAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTGCAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCCGACTA C TCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCG TTCGGGGCGCAGTGCAACGCCGC CGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGC TTCGTGC TGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAG TGGACCCCGA TCGAGCCA TAGCAGGCAGGGCCCAGCCAGCCATGGCTGGTTGG CCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGG ] [+] EMBL C74197 [ CTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTCGCTGGCCGGCGCCGCACCNG GGNTAGNGAAGAGGAGCGGCGTGACGTACGTNGAGGGGATGAACGCGTACAGNGGGCTCAANGCGCTCAACAAGGTGACCCTGCTCGGCG ] [-] EMBL CF335885 [ GTCCATGGCCACAACGCTGCCGTCGCTGGCCGGCGCCGCACCGGCGGCGAG GAAGAGGAGCGGCGTGACGTACGTGGAGGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCCGACTATC TCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCG TTCGGGGCGCAGTGCAACGCCGC CGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGC TTCGTGC TGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAG TGGACCCCGA TCGAGCCA TAGCAGGCAGGGCCCAGCCAGCCATGGCTGGTTGG CCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGGCAGAACCTGCAAATGCAATTGGTTTTTCAGCTGTAAAAAA ] [+] EMBL OSS11641A [ CGTACGTGGAGGGGATGAACGCGTACAGGGGNCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCCGACTA C TCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCGTTTCGGGGCGCAGTGCAACGNCGC CGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCNTTCGGCTTTCGTGCTTGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAGTTGGACCCCGATTCGAGCCATTAGCAGGCAGGGCCCAGCCAACCATTNTNGTTTGGNCCCCATTAAGCCGTTATATATna ] [-] EMBL CF334707 [ GGGGATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCCGACTA CATCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCG TTCGGGGCGCAGTGCAACGCCGCNCGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGC TTCGTGC TGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAG TGGACCCCGA TCGAGCCA TAGCAGGCAGGGCCCAGCCAGCCATGGCTGGTTGG CCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGGCAGAACCTGCAAATGCAATTGGTTTTTCAGCTGTAAAAAAAAA] [+] EMBL CB683624 [ AACCCTTACAGCCTGCTCAAGGCGCTCAACAAGGTGACTCTGCTCTGCGTGCGCTAGACCGCCGACTA C TCGTTCGCCAAGGTGGTGGCCAATCTGAACCCCGCCGGCGGGAAGAGCCGCGGCGGCGCG TTCGGGGCGCATTGCAACTCCGC CGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCCGC TTCGTGC TGCTCCTGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAG TGGACCCCGA TCGAGCCA TATCAGGCAGGGCCCACCCAGCCATGGCTGGTTGG CCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACAtcg ] [-] EMBL CF332588 [ GCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAGACCGCCGACTA C TCGTTCGCCAAGGTGGTGGCCAAGTTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCG TTCGGGGCGCAGTGCAACGCCGC CGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGC TTCGTGC TGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAG TGGACCCCGA TCGAGCCA TAGCAGGCAGGGCCCAGCCAGCCATGGCTGGTTGG CCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAGAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGGCAGAACCTGCAAAaaaaa ] [+] EMBL CF589202 [ GACTA C TCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGCCGCGGCGGCGCG TTCGGGGCGCAGTGCAACGCCGC CGGTGAGATATTCAGGATCGCCGTCATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGC TTCGTGC TGCTCCGGGTGGAGGCGGCCGTCGAGGAGTCGGAGTAG TGGACCCCGA TCGAGCCA TAGCAGGCAGGGCCCAGCCAGCCATGGCTGGTTGG CCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATTAAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGTTTTGGAGG ] [+] EMBL BI799777 [ ccgCTTGGAACGAAACACGTTTTGGAGGCAGAACCTGCAAATGC ATTGGTTTTTCAGCTGTAAAAAAA ] consensusID : consensus_15506#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 241 fasta sequence [CCCCCTGCGCCATTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTCGCTGGCCGCGCCGACCNGAGGGANAGAGGAGCGGCGTGACGTACGTGGAGGGATGAACGCGTACAGGGCTCAAGGGTCAACAAGGTACCCTGCTCGGGTCGAAGACCGCNCTACTCTTCGCAAGGTGTGGCAAGTGAGCCCGC] [+] EMBL OSC9191 [CCCCCTGCGCCATTGCCGGCCACACTCCTCTTCCTCCTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCGTCGCTGGCCGCGCCGACCNGAGGGANAGAGGAGCGGCGTGACGTACGTGGAGGGATGAACGCGTACAGGGCTCAAGGGTCAACAAGGTACCCTGCTCGGGTCGAAGACCGCNCTACTCTTCGCAAGGTGTGGCAAGTGAGCCCGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15506#0 GAGTAGAAAGACCCACTCCAACCCCCCCTGCGCCATTGCCGG-CCACACTCCTCTTCCTC 59 consensus_15506#2 -----------------------CCCCCTGCGCCATTGCCGG-CCACACTCCTCTTCCTC 36 consensus_15506#1 -------------------GTCCGCCCTTGCGCCATTGCCGGGCCACACTCCTCTTCCTC 41 *** ************** ***************** consensus_15506#0 CTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCG 119 consensus_15506#2 CTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCG 96 consensus_15506#1 CTCCATCGCCAAGAACCACCACGAGCAATGGCGTCGCTGTCCATGGCCACAACGCTGCCG 101 ************************************************************ consensus_15506#0 TCGCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGG 179 consensus_15506#2 TCGCTGGCCG-CGCCG-ACCNGAGG---GANAGAGGAGCGGCGTGACGTACGTGGAGGG- 150 consensus_15506#1 TCGCTGGCCGGCGCCGCACCGGCGGCGAGGAAGAGGAGCGGCGTGACGTACGTGGAGGGG 161 ********** ***** *** * ** * **************************** consensus_15506#0 ATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAG 239 consensus_15506#2 ATGAACGCGTACA--GGGCTCAAGGG--TCAACAAGGT-ACCCTGCTCGG---GTCGAAG 202 consensus_15506#1 ATGAACGCGTACAGCGGGCTCAAGGCGCTCAACAAGGTGACCCTGCTCGGCGTGCGCAAG 221 ************* ********** ********** *********** * *** consensus_15506#0 ACCGCCGACTACTCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGC 299 consensus_15506#2 ACCGCN--CTACTC-TTCGC-AAGGTG-TGGCAAG--TGAGCCC-GC------------- 241 consensus_15506#1 ACCGCCGACTACTCGTTCGCCAAGGTGGTGGCCAAGCTGAGCCCCGCCGGCGGGAAGAGC 281 ***** ****** ***** ****** **** * ******* ** consensus_15506#0 CGCGGCGGCGCGTTCGGGGCGCAGTGCAACGCCGCCGGTGAGATATTCAGGATCGCCGTC 359 consensus_15506#2 ------------------------------------------------------------ consensus_15506#1 CGCGGCGGCGCGTTCGGGGCGCAGTGCAACGCCGCCGGTGAGATATTCAGGATCGCCGTC 341 consensus_15506#0 ATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGCTTCGTGCTGCTCCGGGTGGAG 419 consensus_15506#2 ------------------------------------------------------------ consensus_15506#1 ATCATGAACGGGCTCGTGCTCGTCGGCGTCGCCGTCGGCTTCGTGCTGCTCCGGGTGGAG 401 consensus_15506#0 GCGGCCGTCGAGGAGTCGGAGTAGTGGACCCCGATCGAGCCATAGCAGGCAGGGCCCAGC 479 consensus_15506#2 ------------------------------------------------------------ consensus_15506#1 GCGGCCGTCGAGGAGTCGGAGTAGTGGACCCCGATCGAGCCATAGCAGGCAGGGCCCAGC 461 consensus_15506#0 CAGCCATGGCTGGTTGGCCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATT 539 consensus_15506#2 ------------------------------------------------------------ consensus_15506#1 CAGCCATGGCTGGTTGGCCCCGATAAGCCGTGATATATAACTGTGATGTATGTTTCGATT 521 consensus_15506#0 AAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGT 599 consensus_15506#2 ------------------------------------------------------------ consensus_15506#1 AAAATTTGCTTTCGTTTTGTACCCATGACGATTGGTGAATACCCTTGGAACGAAACACGT 581 consensus_15506#0 TTTGGAGGAGACTGCAAAAAAAAAAAAAAAAAAACCTAGGGGCCGACCCCATGCCTATGA 659 consensus_15506#2 ------------------------------------------------------------ consensus_15506#1 TTTGGAGGCAGAACCTGCAAATGCAATTGGTTTTTCAGCTGTAAAAAAAAA--------- 632 consensus_15506#0 CGATTACCCTCCTGGCGGTAAAGCGATGGAACCCGGTCCATATGCTGGCATCCCTCCATG 719 consensus_15506#2 ------------------------------------------------------------ consensus_15506#1 ------------------------------------------------------------ consensus_15506#0 GAACAAAGCCCAGCTCATTCACGAAGAGAGCCGCGCTACACAGGGTGGGGACATCGCACC 779 consensus_15506#2 ------------------------------------------------------------ consensus_15506#1 ------------------------------------------------------------ consensus_15506#0 CTTTTTTTTTTCGTCGACAGGCTGGTGGGTGTCCAAATTGACCTAAAGGG 829 consensus_15506#2 -------------------------------------------------- consensus_15506#1 -------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||