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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15520#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1941 fasta sequence
[CACTCCCGATCTCCCCGCTCCCCGCGTCCCGTCTCCGATCCACCCAAACACCCGCACCGCCGCGCTACGCGAGCACGGCACCGCGGCGCGGCGCGACTCCGCAGGCGACAAGCCGAGGAGAATCCCGCGCCCGCCCGCCCGCATCACCGCCGGATGGCCGCCGGCCGTCGCCGGTAGGGCGATAGGCGGGTAGATCCAGATCCGGCGGGGCGGGATCATATACACCCCGCGCCGATGGCGGGCGCGGTGTCGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCCCTCCAGGCTGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGATGCCGGGGTCACCTACATGTTCATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCGCCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAGTTGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGATGGATTTTGGGTACCCACAATACACGGAGGCGAAAATCTTAAGTGAATTCATTAAGACGGATGCGTACAGGATGGAGGTATCACAGAGGCCACCTATGGCAGTGACAAATGCCGTGTCATGGCGGAGTGAGGGTATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTTGT-GGAGAGTGTTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGAAGATGCGGACATATTTGAGTGGAATGCCTGAGTGCAAACTTGGATTGAACGATAGGGTTCTTTTGGAGGCTCAAGGCCGAGCTACTAAAGGAAAAGCAATAGATCTTGATGATATTAAATTTCACCAGTGCGTGAGGTTGGCTAGATTTGAGAATGATAGAACTATATCCTTCATACCTCCTGACGGATCTTTCGATCTAATGACATACAGACTTAGCACCCAGGTAAAACCACTTATCTGGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAAGAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTTCAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGAGAGATGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGGATTACATGTGCAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTC-AAAGATTTTGATGCTAAATTTC-AACTCCCAAGATACATGTTTGATG-CTCGATATA-CAACATATAGTTGGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAAC-TTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAATGAAATACCTGGGCGGTGCTTTTGAAGTCCAGATTAAAACTTCTGAACCTGTAGAACTATTTTTAAGGCATGCTTTCTGTTGTGTAAAAAAAA]
[+] EMBL AK065538 [CACTCCCGATCTCCCCGCTCCCCGCGTCCCGTCTCCGATCCACCCAAACACCCGCACCGCCGCGCTACGCGAGCACGGCACCGCGGCGCGGCGCGACTCCGCAGGCGACAAGCCGAGGAGAATCCCGCGCCCGCCCGCCCGCATCACCGCCGGATGGCCGCCGGCCGTCGCCGGTAGGGCGATAGGCGGGTAGATCCAGATCCGGCGGGGCGGGATCATATACACCCCGCGCCGATGGCGGGCGCGGTGTCGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCCCTCCAGGCTGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGATGCCGGGGTCACCTACATGTTCATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCGCCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAGTTGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGATGGATTTTGGGTACCCACAATACACGGAGGCGAAAATCTTAAGTGAATTCATTAAGACGGATGCGTACAGGATGGAGGTATCACAGAGGCCACCTATGGCAGTGACAAATGCCGTGTCATGGCGGAGTGAGGGTATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTTGT GGAGAGTGTTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGAAGATGCGGACATATTTGAGTGGAATGCCTGAGTGCAAACTTGGATTGAACGATAGGGTTCTTTTGGAGGCTCAAGGCCGAGCTACTAAAGGAAAAGCAATAGATCTTGATGATATTAAATTTCACCAGTGCGTGAGGTTGGCTAGATTTGAGAATGATAGAACTATATCCTTCATACCTCCTGACGGATCTTTCGATCTAATGACATACAGACTTAGCACCCAGGTATAACCACTTATCTGGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAAGAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTTCAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGAGAGATGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGGATTACATGTGCAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTC AAAGATTTTGATGCTAAATTTC AACTCCCAAGATACATGTTTGATG CTCGATATA CAACATATAGTTGGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAAC TTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAATGAAATACCTGGGCGGTGCTTTTGA ]
[+] EMBL CB664350 [ GCACCGCCGCGCTACGCGAGCACGGCACCGCGGCGCGGCGCGACTCCGCAGGCGACAAGCCGAGGAGAATCCCGCGCCCGCCCGCCCGCATCACCGCCGGATGGCCGCCGGCCGTCGCCGGTAGGGCGATAGGCGGGTAGATCCAGATCCGGCGGGGCGGGATCATATACACCCCGCGCCGATGGCGGGCGCGGTGTCGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCCCTCCAGGCTGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGATGCCGGGGTCACCTACATGTTCATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCGCCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAGTTGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGATGGATTTTGGGTACCCACAATACACGGAGGCGAAAATCTTAAGTGAATTCATTAAGACGGATGCGTACAGGATGGAGGTATCACAGAGGCCACCTATGGCAGTGACAAATGCCGTGTCATGGCGGAGTGAGGGTATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTTGT GGAGAGTGTTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGAAGATGCGGACATATTTGAGTGGAATGCCTGAGTGCAAACTT ]
[+] EMBL CB672041 [ GCTACGCGAGCACGGCACCGCGGCGCGGCGCGACTCCGCAGGCGACAAGCCGAGGAGAATCCCGCGCCCGCCCGCCCGCATCACCGCCGGATGGCCGCCGGCCGTCGCCGGTAGGGCGATAGGCGGGTAGATCCAGATCCGGCGGGGCGGGATCATATACACCCCGCGCCGATGGCGGGCGCGGTGTCGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCCCTCCAGGCTGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGATGCCGGGGTCACCTACATGTTCATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCGCCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAGTTGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGATGGATTTTGGGTACCCACAATACACGGAGGCGAAAATCTTAAGTGAATTCATTAAGACGGATGCGTACAGGATGGAGGTATCACAGAGGCCACCTATGGCAGTGACAAATGCCGTGTCATGGCGGAGTGAGGGTATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTTGT GGAGAGTGTTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGAAGATGCGGACATATTTGAGTGGAATGCCTGAGT ]
[+] EMBL CF322504 [ ATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCGCCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAGTTGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGATGGATTTTGGGTACCCACAATACACGGAGGCGAAAATCTTAAGTGAATTCATTAAGACGGATGCGTACAGGATGGAGGTATCACAGAGGCCACCTATGGCAGTGACAAATGCCGTGTCATGGCGGAGTGAGGGTATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTTGTGGGAGAGTGTTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGAAGATGCGGACATATTTGAGTGGAATGCCTGAGTGCAAACTTGGATTGAACGATAGGGTTCTTTTGGAGGCTCAAGGCCGAGCTACTAAAGGAAAAGCAATAGATCTTGATGATATTAAATT ]
[+] EMBL CA998406 [ TGT GGAGAGTGTTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGAAGATGCGGACATATTTGAGTGGAATGCCTGAGTGCAAACTTGGATTGAACGATAGGGTTCTTTTGGAGGCTCAAGGCCGAGCTACTAAAGGAAAAGCAATAGATCTTGATGATATTAAATTTCACCAGTGCGTGAGGTTGGCTAGATTTGAGAATGATAGAACTATATCCTTCATACCTCCTGACGGATCTTTCGATCTAATGACATACAGACTTAGCACCCAGGTAAAACCACTTATCTGGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAAGAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTTCAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGAGAGATGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGGATTACATGTGCAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAA ]
[-] EMBL CB623259 [ ACTTAGCACCCAGGTAAAACCACTTATCTGGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAAGAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTTCAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGAGAGAAGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGGATTACATGTGCAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTC AAAGATTTTGATGCTAAATTTC AACTCCCAAGATACATGTTTGATG CTCGATATA CAGCATATAGTTGGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAACTTTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGATTTGGTATAAATGAAATAAGGGGGCGGTGCTTTTGAAGTCCAGATTAAAACTT ]
[-] EMBL CB623286 [ CTTAGCACCCAGGTAAAACCACTTATCTGGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAAGAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTTCAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGAGAGAAGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGGATTACATGTGCAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTC AAAGATTTTGATGCTAAATTTC AACTCCCAAGATACATGTTTGATG CTCGATATC CAGCATATAGTTGGCATTGGGACGTTCCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAACTTTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGATTTGGTATAAATGAAATACTTGGGCGGTGCTTTTGAAGTCCAGATTAAAACT ]
[-] EMBL CB669238 [ CACTTATCTGGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAAGAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTTCAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGAGAGATGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGGATTACATGTGCAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTC AAAGATTTTGATGCTAAATTTC AACTCCCAAGATACATGTTTGATG CTCGATATA CAACATATAGTTGGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAAC TTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAATGAAATACCTGGGCGGTGCTT ]
[-] EMBL CB664351 [ GAAGCCGAATAGAACTTATGGTGAAAGCAAGAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTTCAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTTTGCTGCATATGCACCTGAGAGAGATGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGGATTACATGTGCAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCCCCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATTTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATTTTTGATATGGGTGCTC AAAGATTTTGATGGTAAATTTC AACTCCCAAGATACATGTTTGATG CTCGATATA CAACATATAGTTGGCATTGGGACGTTGCCATGGAAGTTTTTGAAAAGCTCAACCATGCAAGGTTTTTTTGTCTCGTTGTTCATTTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAAC TTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTGGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGTTGAATTGGTATAAATGAAATACCTGGGCGGGGCTTTTGAA ]
[+] EMBL CF303831 [ AGGATTACATGTGCAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTC AAAGATTTTGATGCTAAATTTC AACTCCCAAGATACATGTTTGATG CTCGATATA CAACATATAGTTGGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAAC TTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTT ]
[+] EMBL AU092784 [ AATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTC AAAGATTTTGATGCTAAATTTC AACTCCCAAGATACATGTTTGATG CTCGATATA CAACATATAGTTGGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAAC TTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAATGAAATACCTGGGCGGTGCTTTTGAAGTCCAGATT ]
[+] EMBL CB684829 [ agcccttAAGGATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTC AAAGATTTTGATGCTAAATTTC AACTCCCAAGATACATGTTTGATG CTCGATATA CAACATATAGTTGGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAAC TTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAATGAAATACCTGGGCGGTGCTTTTGAAGTC ]
[-] EMBL CB684830 [ TACCATATTTCATTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATCCATTTCAATGGCTGGTGAATAGGAAATGAGAGTTATAGGAGTTATTTCCGATATGGATGTTC AAAGATTTTGATGTTAAATTTT AACTCCCAAGATACATGTTTGATG CTCGATATA CAACATATAGTTGGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCACCCATGCAAGGTTTTTCTGTTTAGTTGTTCATCTTGTTAGTGTTCCTTTGCCATGGTTATTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAAC TTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGAGGGGGTAGAACTTTCCCCCTTTGGTTTTACACAAAAATTTTGAGCTGAATTGGTAT ]
[+] EMBL AU032444 [ AGA ACATTACAAGGGCNGGT AANACGGACTGAGNCCTATANGNGTTACCCCNTAAAGGGCTGCCCAAAAGATTTTGATGCNAAATTTCAAACNCCCNAGATACATGTTTGATGCCNCGATATACCNACATATAGTTGGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAAC TTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAATGAAATACCTGGGCGGTGCTTTTGAAGTCCAGATTAAAACTGCTGAACCTGTAGAACTATTTTTAAGGCATGCTTTCTGTTGTGTAAAAAAAA]
consensusID : consensus_15520#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1880 fasta sequence
[ACGAGAGCGCGCGCGCCGCGCCGCGCCTCGCCTCGCTGATCCGGCAAGCAAACCGCGGCGCCGCGACGCGACGCGAACCCCGCCGCGCCGCGAGTGTGGGGGAGCACGAATGGTAGCCGGCCGCGGTTAGGTAGGTGGGCGCCGCGGGGTGTCGATAGCTCCGGAGGGTGGGGGTGGGGGGAGCAGATCCAGATCCAGCGAGGGCGCGAGCAATGGCGGCGGGGGCGGTGTCGGCGCTGTTCCTGCTCGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCGCTCCAGGCCGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGAGCGACGCGGAGGTGCTCTCCCCCGTCGTCCACGATGACGCCGGCGTCTCCTACATGTTCATCCAGCACAACAATGTGTTCCTCCTCACCGCGTCCCGTCAGAACTGCAACGCCGCCAGCATACTCCTCTTCCTCCACCGCGTCGTCGATGTGTTCAAGCATTACTTCGAGGAGCTGGAGGAGGAATCATTGAGGGACAACTTCGTCGTTGTGTATGAGTTGCTTGATGAGATGATGGATTTCGGGTACCCACAATACACGGAAGCAATGATCCTGAGCGAGTTCATTAAAACGGACGCGTACAGGATGGAGGTCACTCAGAGGCCGCCCATGGCAGTGACAAATGCTGTGTCATGGAGGAGCGAGGGGATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTGGTGGAGAGTGTCAATATCCTCGTTAACAGCAATGGGCAGATAGTGAGGTCTGATGTCATCGGTGAGCTGAAAATGCGAACCTTTCTAAGTGGAATGCCCGAGTGCAAACTGGGGTTGAATGATAGGGTTCTCTTGGAGGCTCAAGGCCGAACAACTAAAGGAAAAGCAATAGATTTGGACGATATCAAATTCCATCAGTGTGTTCGGTTGGCCAGATTTGAGAATGACAGGACTATATCCTTCATTCCTCCAGATGGATCATTTGATCTGATGACTTACAGACTTAGCACCCAGGTGAAACCTCTTATCTGGGTAGAAGCACAAGT-GGAGAAACATTCAAGAAGTCGGATACAGATCACAGTGAAGACAAGAAGTCAGTTCAAAGAAAGGAGCACAGCAACAAATGTAGAAATTGAAGTACCAGTGCCTGAGGATTCGACAAACCCAAATATAAGAACTTCAATGGGCTCTGCGGCATATGCACCTGAGAGAGATGCGATGGTCTGGAAAATAAAATCATTTCCTGGTGGCAAGGAATATATGTGTAGAGCAGAATTTAGCCTTCCAAGCATAACATCAGAAGATGGAATGCCTGAAAAGAAGGCTCCGATACGTGTGAAATTTGAGATACCGTATTTTACCGTGTCGGGTATTCAGGTTCGCTATCTGAAAATCATCGAAAAGAGTGGATATCAGGCCCTTCCTTGGGTTCGATACATCACAATGGCTGGTGAATATGAGTTGAGACTCATCTGATTTTCACACCTCTGGTTGCTGGAAGAAATGATTGATTTCCTGGAGTCCAAGCCTCCCAGGGGGCGTTTACAGAGGCAACTCAGACGAACATTCACTCGCTGGATGGGCTCCCGAGGCTTCATGGTTCCATCTCGCGCAAGCGAGGAAAGCTGCTGACAGCCATGTTATTGATTTTACCCATGTTTTGCTGCAAGTTTGTCATCAGTATAGGTCCCCAGAATCTTCATTTCTTTTCTGCGTTTTGTTCCCAGCCGATATCTCTTGTATCATTGTAAAATTTATTTAATCAACTGATGTCACAAGCTTGGATTTTTTTTTGTATCTCCTGTACCTAATTAACAAGCTTGGATCATGTATACCACTATGTATATCTCT]
[+] EMBL AK065138 [ACGAGAGCGCGCGCGCCGCGCCGCGCCTCGCCTCGCTGATCCGGCAAGCAAACCGCGGCGCCGCGACGCGACGCGAACCCCGCCGCGCCGCGAGTGTGGGGGAGCACGAATGGTAGCCGGCCGCGGTTAGGTAGGTGGGCGCCGCGGGGTGTCGATAGCTCCGGAGGGTGGGGGTGGGGGGAGCAGATCCAGATCCAGCGAGGGCGCGAGCAATGGCGGCGGGGGCGGTGTCGGCGCTGTTCCTGCTCGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCGCTCCAGGCCGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGAGCGACGCGGAGGTGCTCTCCCCCGTCGTCCACGATGACGCCGGCGTCTCCTACATGTTCATCCAGCACAACAATGTGTTCCTCCTCACCGCGTCCCGTCAGAACTGCAACGCCGCCAGCATACTCCTCTTCCTCCACCGCGTCGTCGATGTGTTCAAGCATTACTTCGAGGAGCTGGAGGAGGAATCATTGAGGGACAACTTCGTCGTTGTGTATGAGTTGCTTGATGAGATGATGGATTTCGGGTACCCACAATACACGGAAGCAATGATCCTGAGCGAGTTCATTAAAACGGACGCGTACAGGATGGAGGTCACTCAGAGGCCGCCCATGGCAGTGACAAATGCTGTGTCATGGAGGAGCGAGGGGATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTGGTGGAGAGTGTCAATATCCTCGTTAACAGCAATGGGCAGATAGTGAGGTCTGATGTCATCGGTGAGCTGAAAATGCGAACCTTTCTAAGTGGAATGCCCGAGTGCAAACTGGGGTTGAATGATAGGGTTCTCTTGGAGGCTCAAGGCCGAACAACTAAAGGAAAAGCAATAGATTTGGACGATATCAAATTCCATCAGTGTGTTCGGTTGGCCAGATTTGAGAATGACAGGACTATATCCTTCATTCCTCCAGATGGATCATTTGATCTGATGACTTACAGACTTAGCACCCAGGTGAAACCTCTTATCTGGGTAGAAGCACAAGT GGAGAAACATTCAAGAAGTCGGATACAGATCACAGTGAAGACAAGAAGTCAGTTCAAAGAAAGGAGCACAGCAACAAATGTAGAAATTGAAGTACCAGTGCCTGAGGATTCGACAAACCCAAATATAAGAACTTCAATGGGCTCTGCGGCATATGCACCTGAGAGAGATGCGATGGTCTGGAAAATAAAATCATTTCCTGGTGGCAAGGAATATATGTGTAGAGCAGAATTTAGCCTTCCAAGCATAACATCAGAAGATGGAATGCCTGAAAAGAAGGCTCCGATACGTGTGAAATTTGAGATACCGTATTTTACCGTGTCGGGTATTCAGGTTCGCTATCTGAAAATCATCGAAAAGAGTGGATATCAGGCCCTTCCTTGGGTTCGATACATCACAATGGCTGGTGAATATGAGTTGAGACTCATCTGATTTTCACACCTCTGGTTGCTGGAAGAAATGATTGATTTCCTGGAGTCCAAGCCTCCCAGGGGGCGTTTACAGAGGCAACTCAGACGAACATTCACTCGCTGGATGGGCTCCCGAGGCTTCATGGTTCCATCTCGCGCAAGCGAGGAAAGCTGCTGACAGCCATGTTATTGATTTTACCCATGTTTTGCTGCAAGTTTGTCATCAGTATAGGTCCCCAGAATCTTCATTTCTTTTCTGCGTTTTGTTCCCAGCCGATATCTCTTGTATCATTGTAAAATTTATTTAATCAACTGATGTCACAAGCTTGGATTTTTTTTTGTATCTCCTGTACCTAATTAACAAGCTTGGATCATGTATACCACTATGTATATCTCT]
[+] EMBL CA999460 [ GGAGAGTGTCAATATCCTCGTTAACAGCAATGGGCAGATAGTGAGGTCTGATGTCATCGGTGAGCTGAAAATGCGAACCTTTCTAAGTGGAATGCCCGAGTGCAAACTGGGGTTGAATGATAGGGTTCTCTTGGAGGCTCAAGGCCGAACAACTAAAGGAAAAGCAATAGATTTGGACGATATCAAATTCCATCAGTGTGTTCGGTTGGCCAGATTTGAGAATGACAGGACTATATCCTTCATTCCTCCAGATGGATCATTTGATCTGATGACTTACAGACTTAGCACCCAGGTGAAACCTCTTATCTGGGTAGAAGCACAAGTGGGAG AACATTCAAGAAGTCGGATACA ]
consensusID : consensus_15520#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1848 fasta sequence
[CTCCCCGCTCCCCGCGTCCCGTCTCCGATCCACCCAAACACCCGCACCGCCGCGCTACGCGAGCACGGCACCGCGGCGCGGCGCGACTCCGCAGGCGACAAGCCGA-GGAGAATCCCGCGCCCGCCCGCCCGCATCACCGCCGGATGGCCGCCGGCCGTCGCCGGTAGGGCGATAGGCGGGTAGATCCAGATCCGGCGGGGCGGGATCATATACACCCCGCGCCGATGGCGGGCGCGGTGTCGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCCCTCCAGGCTGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGA-TGCCGGGGTCACCTACATGTTCATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCGCCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAG-TTGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGATGGATTTTGGGTACCCACAATACACGGAGGCGAAAATCTTAAGTGAATTCATTAAGACGGATGCGTACAGGATGGAGGTATCACAGAGGCCACCTATGGCAGTGACAAATGCCGTGTCATGGCGGAGTGAGGGTATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTTGTGGAGAGTGTTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGAAGATGCGGACATATTTGAGTGGAATGCCTGGGTGCAAACTTGGATTGAACGATAGGGTTCTTTTGGAGGCTCAAGGCCGAGCTACTAAAGGAAAAGCAATAGATCTTGATGATATTAAATTTCACCAGTGCGTGAGGTTGGCTAGATTTGAGAATGATAGAACTATATCCTTCATACCTCCTGACGGATCTTTCGATCTAATGACATACAGACTTAGCACCCAGGTAAAACCACTTATCTGGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAAGAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTTCAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGAGAGATGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTCAAAGATTTTGATGCTAAATTTCAACTCCCAAGATACATGTTTGATGCTCGATATACAACATATAGTTGGCATTGGGACGTTGCCAT-GGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAACTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAATGAAATACCTGGGCGGTGCTTTTGA]
[+] EMBL AK060762 [CTCCCCGCTCCCCGCGTCCCGTCTCCGATCCACCCAAACACCCGCACCGCCGCGCTACGCGAGCACGGCACCGCGGCGCGGCGCGACTCCGCAGGCGACAAGCCGA GGAGAATCCCGCGCCCGCCCGCCCGCATCACCGCCGGATGGCCGCCGGCCGTCGCCGGTAGGGCGATAGGCGGGTAGATCCAGATCCGGCGGGGCGGGATCATATACACCCCGCGCCGATGGCGGGCGCGGTGTCGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCCCTCCAGGCTGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGA TGCCGGGGTCACCTACATGTTCATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCGCCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAG TTGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGATGGATTTTGGGTACCCACAATACACGGAGGCGAAAATCTTAAGTGAATTCATTAAGACGGATGCGTACAGGATGGAGGTATCACAGAGGCCACCTATGGCAGTGACAAATGCCGTGTCATGGCGGAGTGAGGGTATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTTGTGGAGAGTGTTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGAAGATGCGGACATATTTGAGTGGAATGCCTGGGTGCAAACTTGGATTGAACGATAGGGTTCTTTTGGAGGCTCAAGGCCGAGCTACTAAAGGAAAAGCAATAGATCTTGATGATATTAAATTTCACCAGTGCGTGAGGTTGGCTAGATTTGAGAATGATAGAACTATATCCTTCATACCTCCTGACGGATCTTTCGATCTAATGACATACAGACTTAGCACCCAGGTAAAACCACTTATCTGGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAAGAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTTCAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGAGAGATGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGAGCTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTCAAAGATTTTGATGCTAAATTTCAACTCCCAAGATACATGTTTGATGCTCGATATACAACATATAGTTGGCATTGGGACGTTGCCAT GGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTCTCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTTACTGTAAGTTACCCATCAAGTATAGCTTTGAAAAAAACTTTTTTTTGTTCACTTGTATCATTATTGATTTATTTTTGTGGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAATGAAATACCTGGGCGGTGCTTTTGA]
[+] EMBL OSS4884A [ GCACCGCCGCGCTACG GAGCACGGCACCGCGGCGNGNCGCGACTCCGCAGGCGACAAG CGATGGAGAATCCCGCGNCCGCCCGGNCGCATCACCGCCGGATGGNCGCCGG CGTTGCCGGTAGGGCGATAGGCGNGTAGATCCAGATCCGGCGGGGCGGGATCATATACACCCCGCGCCGATGG GGGCGCGGTGTCGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTTCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCCCTCCAGGTTGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGGCGACTCGGAGGCGCACTCGCCGNTGGTCTACGACGATTGCCGGGGTCACCTACATGTTCATNCAGCACAACAACGTGTTCCTACTAACCGCTTC ]
[+] EMBL CB669237 [ ACTCCGCAGGCGACAAGCCGA GGAGAATCCCGCGCCCGCCCGCCCGCATCACCGCCGGATGGCCGCCGGCCGCCGCCGGTAGGGCGATAGGCGGGTAGATCCAGATCCGGCGGGGCGGGATCATATACCCCCCGCGCCGATGGCGGGCGCGGAGTCGGCGCTGTTCCTTCTGGAGATCAAGGGCCGCGGCCTCGTCTGGCGCGACTACCGCGGCGACGACTCCGCCCTCCAGGCTGAGCGCTTCTTCACCACGCTCCTCAACAAGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGA ]
[+] EMBL OSC5691 [ CGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTCCTCGTCTGGCGCGACTACCGCGGCGACGTCTCCGCCCTCCAGG TGAGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGA TGCCGGGGTCACCTACATGTTCATCCAGCACAACAACGTGTTCCTACTAACCGNCTNCCGCCAGAACTGCAACGGCGCCAGCATCCTCCTCTTNCTNCACCGCGTCGTTGATGTGTTCAAGCANTATTTCGAAGAGTTTNGAGG ]
[+] EMBL CA999126 [ AGCGCTTCTTCACCAAGCTCCTCGACAAGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGA TGCCGGGGTCACCTACATGTTCATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCGCCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAG TTGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGAT ]
[+] EMBL C27965 [ AATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAATACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGAAGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTGGTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTCAAAGATTTTGATGCTAAATTTCAACTCCCAAGATACATGTTTGATGCTCGATATACAACATATAGTTGGCATTGGGACGTTGCCATGGGAAGTCTTTGAAAAGCTC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15520#0 -CACTCCCGATCTCCCCGCTCCCCGCGTCCCGTCTCCGATCCACCCAAACACCCGCACCG 59
consensus_15520#2 -----------CTCCCCGCTCCCCGCGTCCCGTCTCCGATCCACCCAAACACCCGCACCG 49
consensus_15520#1 ACGAGAGCGCGCGCGCCGCGCCGCGCCTCGCCTCGCTGATCCGGCAAGCAAACCGCGGCG 60
* * **** ** *** ** * ** * ***** * * * **** **
consensus_15520#0 CCGCGCTACGCGAGCACGGCACCGCGGCGCGGCGCGACTCCGCAGGCGACAAGCCGAGGA 119
consensus_15520#2 CCGCGCTACGCGAGCACGGCACCGCGGCGCGGCGCGACTCCGCAGGCGACAAGCCGAGGA 109
consensus_15520#1 CCGCG--ACGCGA-CGCGA-ACCCCGCCGCGCCGCGAGTGTGGGGGAG-CACGAATGGTA 115
***** ****** * ** *** ** **** ***** * * ** * ** * * *
consensus_15520#0 GAATCCCGCGCCCGCCCGCCCGCATCACCGCCGGATGGCCGCCGGCCGTCGCCGGTAGGG 179
consensus_15520#2 GAATCCCGCGCCCGCCCGCCCGCATCACCGCCGGATGGCCGCCGGCCGTCGCCGGTAGGG 169
consensus_15520#1 GCCGGCCGCGGTTAGGTAGGTGGG-CGCCGCGGGGTG-TCGATAGCTCCGGAGGGTGGGG 173
* ***** * * **** ** ** ** ** * *** ***
consensus_15520#0 CGATAGGCGGGTAGATCCAGATCCGGCG-GGGCGGGATCATATACACCCCGCGCCGATGG 238
consensus_15520#2 CGATAGGCGGGTAGATCCAGATCCGGCG-GGGCGGGATCATATACACCCCGCGCCGATGG 228
consensus_15520#1 -GTGGGGGGAGCAGATCCAGATCCAGCGAGGGCGCGA-------------GCAATGGCGG 219
* ** * * ************ *** ***** ** ** * **
consensus_15520#0 CGGGCGCGGTGTCGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTCCTCGTCTGGCGCG 298
consensus_15520#2 CGGGCGCGGTGTCGGCGCTGTTCCTTCTGGACATCAAGGGCCGCGTCCTCGTCTGGCGCG 288
consensus_15520#1 CGGGGGCGGTGTCGGCGCTGTTCCTGCTCGACATCAAGGGCCGCGTCCTCGTCTGGCGCG 279
**** ******************** ** *******************************
consensus_15520#0 ACTACCGCGGCGACGTCTCCGCCCTCCAGGCTGAGCGCTTCTTCACCAAGCTCCTCGACA 358
consensus_15520#2 ACTACCGCGGCGACGTCTCCGCCCTCCAGGCTGAGCGCTTCTTCACCAAGCTCCTCGACA 348
consensus_15520#1 ACTACCGCGGCGACGTCTCCGCGCTCCAGGCCGAGCGCTTCTTCACCAAGCTCCTCGACA 339
********************** ******** ****************************
consensus_15520#0 AGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGATGCCGGGGTCACCTACA 418
consensus_15520#2 AGGAGGGCGACTCGGAGGCGCACTCGCCGGTGGTCTACGACGATGCCGGGGTCACCTACA 408
consensus_15520#1 AGGAGAGCGACGCGGAGGTGCTCTCCCCCGTCGTCCACGATGACGCCGGCGTCTCCTACA 399
***** ***** ****** ** *** ** ** *** **** ** ***** *** ******
consensus_15520#0 TGTTCATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCG 478
consensus_15520#2 TGTTCATCCAGCACAACAACGTGTTCCTACTAACCGCCTCCCGCCAGAACTGCAACGCCG 468
consensus_15520#1 TGTTCATCCAGCACAACAATGTGTTCCTCCTCACCGCGTCCCGTCAGAACTGCAACGCCG 459
******************* ******** ** ***** ***** ****************
consensus_15520#0 CCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAGT 538
consensus_15520#2 CCAGCATCCTCCTCTTCCTCCACCGCGTCGTTGATGTGTTCAAGCACTATTTCGAAGAGT 528
consensus_15520#1 CCAGCATACTCCTCTTCCTCCACCGCGTCGTCGATGTGTTCAAGCATTACTTCGAGGAGC 519
******* *********************** ************** ** ***** ***
consensus_15520#0 TGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGA 598
consensus_15520#2 TGGAGGAAGAGTCGCTGAGGGATAACTTTGTCGTTGTGTATGAGTTGCTTGATGAAATGA 588
consensus_15520#1 TGGAGGAGGAATCATTGAGGGACAACTTCGTCGTTGTGTATGAGTTGCTTGATGAGATGA 579
******* ** ** ******* ***** ************************** ****
consensus_15520#0 TGGATTTTGGGTACCCACAATACACGGAGGCGAAAATCTTAAGTGAATTCATTAAGACGG 658
consensus_15520#2 TGGATTTTGGGTACCCACAATACACGGAGGCGAAAATCTTAAGTGAATTCATTAAGACGG 648
consensus_15520#1 TGGATTTCGGGTACCCACAATACACGGAAGCAATGATCCTGAGCGAGTTCATTAAAACGG 639
******* ******************** ** * *** * ** ** ******** ****
consensus_15520#0 ATGCGTACAGGATGGAGGTATCACAGAGGCCACCTATGGCAGTGACAAATGCCGTGTCAT 718
consensus_15520#2 ATGCGTACAGGATGGAGGTATCACAGAGGCCACCTATGGCAGTGACAAATGCCGTGTCAT 708
consensus_15520#1 ACGCGTACAGGATGGAGGTCACTCAGAGGCCGCCCATGGCAGTGACAAATGCTGTGTCAT 699
* ***************** * ******** ** ***************** *******
consensus_15520#0 GGCGGAGTGAGGGTATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTTGTGGAGAGTG 778
consensus_15520#2 GGCGGAGTGAGGGTATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTTGTGGAGAGTG 768
consensus_15520#1 GGAGGAGCGAGGGGATTCGGTACAAGAAGAATGAAGTGTTCTTGGATGTGGTGGAGAGTG 759
** **** ***** *********************************** **********
consensus_15520#0 TTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGA 838
consensus_15520#2 TTAACATTCTTGTTAACAGCAATGGGCAGATTGTGAGATCAGATGTTGTTGGGGCACTGA 828
consensus_15520#1 TCAATATCCTCGTTAACAGCAATGGGCAGATAGTGAGGTCTGATGTCATCGGTGAGCTGA 819
* ** ** ** ******************** ***** ** ***** * ** * ****
consensus_15520#0 AGATGCGGACATATTTGAGTGGAATGCCTGAGTGCAAACTTGGATTGAACGATAGGGTTC 898
consensus_15520#2 AGATGCGGACATATTTGAGTGGAATGCCTGGGTGCAAACTTGGATTGAACGATAGGGTTC 888
consensus_15520#1 AAATGCGAACCTTTCTAAGTGGAATGCCCGAGTGCAAACTGGGGTTGAATGATAGGGTTC 879
* ***** ** * * * *********** * ********* ** ***** **********
consensus_15520#0 TTTTGGAGGCTCAAGGCCGAGCTACTAAAGGAAAAGCAATAGATCTTGATGATATTAAAT 958
consensus_15520#2 TTTTGGAGGCTCAAGGCCGAGCTACTAAAGGAAAAGCAATAGATCTTGATGATATTAAAT 948
consensus_15520#1 TCTTGGAGGCTCAAGGCCGAACAACTAAAGGAAAAGCAATAGATTTGGACGATATCAAAT 939
* ****************** * ********************* * ** ***** ****
consensus_15520#0 TTCACCAGTGCGTGAGGTTGGCTAGATTTGAGAATGATAGAACTATATCCTTCATACCTC 1018
consensus_15520#2 TTCACCAGTGCGTGAGGTTGGCTAGATTTGAGAATGATAGAACTATATCCTTCATACCTC 1008
consensus_15520#1 TCCATCAGTGTGTTCGGTTGGCCAGATTTGAGAATGACAGGACTATATCCTTCATTCCTC 999
* ** ***** ** ******* ************** ** ************** ****
consensus_15520#0 CTGACGGATCTTTCGATCTAATGACATACAGACTTAGCACCCAGGTAAAACCACTTATCT 1078
consensus_15520#2 CTGACGGATCTTTCGATCTAATGACATACAGACTTAGCACCCAGGTAAAACCACTTATCT 1068
consensus_15520#1 CAGATGGATCATTTGATCTGATGACTTACAGACTTAGCACCCAGGTGAAACCTCTTATCT 1059
* ** ***** ** ***** ***** ******************** ***** *******
consensus_15520#0 GGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAA 1138
consensus_15520#2 GGGTGGAAGCACAAATTGAGAAACATTCAAGAAGCCGAATAGAACTTATGGTGAAAGCAA 1128
consensus_15520#1 GGGTAGAAGCACAAGTGGAGAAACATTCAAGAAGTCGGATACAGATCACAGTGAAGACAA 1119
**** ********* * ***************** ** *** * * * ***** ***
consensus_15520#0 GAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTT 1198
consensus_15520#2 GAAGTCAGTTTAAGGAAAGGAGCACAGCAACAAATGTTGAAATTGAAGTGCCTGTTCCTT 1188
consensus_15520#1 GAAGTCAGTTCAAAGAAAGGAGCACAGCAACAAATGTAGAAATTGAAGTACCAGTGCCTG 1179
********** ** *********************** *********** ** ** ***
consensus_15520#0 CAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGA 1258
consensus_15520#2 CAGATGCTACGAACCCTAATATAAGAACTTCAATGGGCTCTGCTGCATATGCACCTGAGA 1248
consensus_15520#1 AGGATTCGACAAACCCAAATATAAGAACTTCAATGGGCTCTGCGGCATATGCACCTGAGA 1239
*** * ** ***** ************************** ****************
consensus_15520#0 GAGATGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAGGATTACATGTGCAGAG 1318
consensus_15520#2 GAGATGCAATGGTCTGGAAAGTAAAATCATTTCCTGGTGGCAAG--------------AG 1294
consensus_15520#1 GAGATGCGATGGTCTGGAAAATAAAATCATTTCCTGGTGGCAAGGAATATATGTGTAGAG 1299
******* ************ *********************** **
consensus_15520#0 CTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAA 1378
consensus_15520#2 CTGAATTTAGTCTTCCAAGTATAACTGCAGAAGAAGCAGCTCCTGAAAAGAAGGCACCAA 1354
consensus_15520#1 CAGAATTTAGCCTTCCAAGCATAACATCAGAAGATGGAATGCCTGAAAAGAAGGCTCCGA 1359
* ******** ******** ***** ******* * * ************** ** *
consensus_15520#0 TACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGA 1438
consensus_15520#2 TACGAGTGAAATTTGAGATACCATATTTCACTGTGTCGGGTATTCAGGTTCGCTATCTGA 1414
consensus_15520#1 TACGTGTGAAATTTGAGATACCGTATTTTACCGTGTCGGGTATTCAGGTTCGCTATCTGA 1419
**** ***************** ***** ** ****************************
consensus_15520#0 AGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTG 1498
consensus_15520#2 AGATCATTGAAAAGAGTGGGTACCAGGCGCTTCCTTGGGTTAGATACATTACAATGGCTG 1474
consensus_15520#1 AAATCATCGAAAAGAGTGGATATCAGGCCCTTCCTTGGGTTCGATACATCACAATGGCTG 1479
* ***** *********** ** ***** ************ ******* **********
consensus_15520#0 GTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTCAAAGATTTTGAT 1558
consensus_15520#2 GTGAATACGAACTGAGACTTATATGAGTTATCTCTGATATGGCTGCTCAAAGATTTTGAT 1534
consensus_15520#1 GTGAATATGAGTTGAGACTCATCTGA-TTTTCACACCTCTGGTTGCTGGAAGAAATGATT 1538
******* ** ******* ** *** ** ** * * *** **** **** * *
consensus_15520#0 G-----CTAAATTTCAACTCCCAAGATACATGTTTGATGCTCGATATACAACATATAGTT 1613
consensus_15520#2 G-----CTAAATTTCAACTCCCAAGATACATGTTTGATGCTCGATATACAACATATAGTT 1589
consensus_15520#1 GATTTCCTGGAGTCCAAGCCTCCCAGGGGGCGTTTACAGAGGCAACTCAGACGAACATTC 1598
* ** * * *** * * **** * * * ** * * *
consensus_15520#0 GGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTC 1673
consensus_15520#2 GGCATTGGGACGTTGCCATGGAAGTCTTTGAAAAGCTCAACCATGCAAGGTTTTTCTGTC 1649
consensus_15520#1 ACTCGCTGGATGG-GCTCCCGAGGCTTC---ATGGTTCCATCTCGCGCAAGCGAGGAAAG 1654
*** * ** ** * * * * ** * * **
consensus_15520#0 TCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTT-ACTGTAAGTTACCCATCAAGTA 1732
consensus_15520#2 TCGTTGTTCATCTTGTTAGTGTTACTTTACCATGGTT-ACTGTAAGTTACCCATCAAGTA 1708
consensus_15520#1 CTGCTGACAGCCATGTTATTGAT-TTTACCCATGTTTTGCTGCAAGTTTGTCATCA-GTA 1712
* ** * ***** ** * ** ***** ** *** ***** ***** ***
consensus_15520#0 TAGCTTTGAAAAAAACT--TTTTTTTTGTTCACTTGTATCATTATTGATTTATTTT-TGT 1789
consensus_15520#2 TAGCTTTGAAAAAAACT--TTTTTTT-GTTCACTTGTATCATTATTGATTTATTTT-TGT 1764
consensus_15520#1 TAGGTCCCCAGAATCTTCATTTCTTTTCTGCGTTTTGTTCCCAGCCGATATCTCTTGTAT 1772
*** * * ** * *** *** * * ** ** *** * * ** * *
consensus_15520#0 GGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAAT 1849
consensus_15520#2 GGGTGTCGAACTTTCCCCCTTTTGTACTACACAAAAATCTTGAGCTGAATTGGTATAAAT 1824
consensus_15520#1 CATTGTAAAATTTATTTAATCAACTGATGT-CACAAGCTTGGATTTTTTTTTGTAT--CT 1829
*** ** ** * * * ** ** * ** * ** **** *
consensus_15520#0 GAAATACCTGGGCGGTGCTTTTGAAGTCCAGATTAAAACTTCTGAACCTGTAGAACTATT 1909
consensus_15520#2 GAAATACCTGGGCGGTGCTTTTGA------------------------------------ 1848
consensus_15520#1 CCTGTACCTAATTAACAAGCTTGGATCATGTATACCACTATGTATATCTCT--------- 1880
***** ***
consensus_15520#0 TTTAAGGCATGCTTTCTGTTGTGTAAAAAAAA 1941
consensus_15520#2 --------------------------------
consensus_15520#1 --------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||