These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15571#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1364 fasta sequence [GAGCCGAGAGCGCAACAAAAGGAAAGCAGGGAAACCTCGCCGTCCTCTCTCTCCATCCATGCCCTAGCACGCGCCGCGCAGCCTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGT-GTCCTGCACATATCCAATATGATAC-TTGCTATC-GGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTG-TGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTGCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCT-CATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCTTCATATGGCCATAGATTGATCTTCTGATGGTTCAATTAAAAAAAAAAA] [+] EMBL AK073303 [GAGCCGAGAGCGCAACAAAAGGAAAGCAGGGAAACCTCGCCGTCCTCTCTCTCCATCCATGCCCTAGCACGCGCCGCGCAGCCTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGT GTCCTGCACATATCCAATATGATAC TTGCTATC GGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTG TGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTGCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCT CATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCT ] [+] EMBL OSC103951 [ ccgGCGCAACAAAAGGAAAGCAGGGAAACCTCGCCGTCCTCTCTCTCCATCCATGCCCTAGCACGCGCCG GCAG CTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGT ] [+] EMBL CB658484 [ AACAAAAGGAAAGCAGGGAAACCTCGCCGTCCTCTCTCTCCATCCATGCCCTAGCACGCGCCGCGCAGCCTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGT GTCCTGCACATATCCAATATGATAC TTGCTATC GGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTG TGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCG ] [+] EMBL AK103953 [ AAAGCAGGGAAACCTCGCCGTCCTCTCTCTCCATCCATGCCCTAGCACGCGCCGCGCAGCCTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGT GTCCTGCACATATCCAATATGATAC TTGCTATC GGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTG TGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTGCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCT CATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCT ] [+] EMBL AU065173 [ GGGAAACCTCGCCGTCCTCTCTCTCCATCCATGCCCTAGCACGCGCCGCGCA NCTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGTGGTCCTGCACATATCCAATATGATACTTTGCTATCGGGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCCATGGn ] [+] EMBL CF318835 [ ATCCATGCCCTAGCACGCGCCGCGCAGCCTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCCCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGT GTCCTGCACATATCCAATATGATAC TTGCTATC GGCAGTATGATCTTCCATGCCACCT ] [+] EMBL CF294434 [ ATCCATGCCCTAGCACGCGCCGCGCAGCCTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGT GTCCTGCACATATCCAATATGATAC TTGCTATC GGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTGNTGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCT ] [+] EMBL OSC106441 [ CGCGCA NCTACGAGCGGGAG CACACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGNTAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGNATTCTACAATACTG ] [+] EMBL C26469 [ CACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGT GTCCTGCACATATCCAATATGATAC TTGCTATC GGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGA CGATGAGACTCCAATGGTG TGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGGATTACCGGNGCACTA ] [+] EMBL AU065749 [ AC TTGCTATC GGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTG TGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAA CGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTCCTGTAAGAAGC TTCACATTGG ACGTC ] [-] EMBL CF318836 [ AGTCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTGCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCT CATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCAaaaaaaa ] [-] EMBL CB658485 [ ATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTGCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCT CATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCTTCATATGGCCATAGATTGATCTTCTGAT ] [+] EMBL AU108581 [ GATNCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTGCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCT CATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAa ] [+] EMBL AU091418 [ CTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTGCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCTACATGTGCTTAGACAAGAAGCAGAGGCA TTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCTTCATATGGCCATAGATTGATCTTCTGATGGTTCAATTAAAAAAAAAAA] consensusID : consensus_15571#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1096 fasta sequence [AAACGAATTCGCCTTGGACCTGACTGGACTGAAGAGTAAAGTTTCTAATGTTCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGTGTCCTGCACATATCCAATATGATACTTGCTATCTGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTGTGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCC-TCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTNCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCTCATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCT-CAGAGATT-AGTTGGAGTGTTGT-CTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCTTCATATGGCCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF328730 [AAACGAATTCGCCTTGGACCTGACTGGACTGAAGAGTAAAGTTTCTAATGTTCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGTGTCCTGCACATATCCAATATGATACTTGCTATCTGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTGTGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCC TCTGTCTCCTATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTC ] [+] EMBL C96752 [ AGTGGTNTTCAAGTTGCATTACGTTGGCCTTCTGTCNCCTATGCACCCCACGGATGTACAAGTACTCCATACAAACTAAAGACATGGCTGCCAAGCGTCTAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAATGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATATTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTNCCGAGCTCAACAGCGTGGGTGGGAGCCCAAAATTACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCTCATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCT CAGAGATT AGTTGGAGTGTTGT CTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCTTCATATGGCCATAAAAAAAAAAAAA ] [+] EMBL BI796981 [ TACCCACCTTTTCGGGTTCTTGCCTTATGTCAAGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTGCTGTTCTCCAGGACCTTAAAGCCAACGCCCTCATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTGACGCCTGTTTTGTACCATACTTAATTGTTGCTCCAGAGATTAAGTTGGAGTGTTGTCCTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAaaa ] [+] EMBL AU030599 [ TCTCCAGGACCTTAAAGCCAACNCCCTCATGTGCTTAGACAAGAAGCAGNGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTNCGGACTACAGTGTTATGATGCCNCACTAGATTTTGTTAACTTTTAACTAACNCCTGTTTTGTNCCATACTTAATTGTTGCT CAGAGATT AGTTGGAGTGTTGT CTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCTTCATNTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF294435 [ GACAAGAAGCAGAGGCATTTTTTTTGTATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCT CAGAGATT AGTTGGAGTGTTGT CTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCTTCATATGGCCATAGAAAAAA ] [+] EMBL AU092070 [ AAGCAGAGGNATTTTTTTTGTAAATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTAACGCCTGTTTTGTACCATACTTAATTGTTGCT CAGAGATT AGTTGGAGTGTTGT CTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTAATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCAAGTTACTGCTTCATATGGCCATAGATTGATCTAAAAAAAAAAAAAA ] [+] EMBL BI795367 [ TATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACTAGATTTTGTTAACTTTTAACTGACGCCTGTTTTGTACCATACTTAATTGTTGCT CAGAGATT AGTTGGAGTGTTGT CTCATAGTTTTGGTCATTAaaaaaa ] consensusID : consensus_15571#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 654 fasta sequence [GGCCGCTAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACTCTCCATCCATGCCCTAGCACGCGCCGCGCAGCCTACGAGCGGGAGCCGCACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGTGTCCTGCACATATCCAATATGATACTTGCTATCGGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTGTGGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGATTTCAAGTTGCATTACGTTGGCCTCTGTC] [+] EMBL CF312339 [GGCCGCTAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAAACTCTCCATCCATGCCCTAGCACGCGCCGCGCAGCCTACGAGCGGGAGCCGCACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGTGTCCTGCACATATCCAATATGATACTTGCTATCGGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCGATGAGACTCCAATGGTGTGGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGGTGCGATTCCAAGTGGATTTCAAGTTGCATTACGTTGGCCTCTGTC] consensusID : consensus_15571#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 285 fasta sequence [AGGTACCGTCCGGAATTCCCGGGTCAGACCCACGCGTCCGGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTCCTGTTCTCCAGGACCTTGAAAGCCAACGCCCTCATGTGCTTAGACAAGAACCAGAGGCATCTTTTTTGGNATATGGGCTTCCAAGTGATTCGGACTACAGTGTTATGATCCTCACTAGATTTTGTTAACTTTTAACTGACCCTGTTGTGTACCATACTTAATGGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCATANT] [-] EMBL BM422263 [AGGTACCGTCCGGAATTCCCGGGTCAGACCCACGCGTCCGGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCTATTTGTCAGTCCTGTTCTCCAGGACCTTGAAAGCCAACGCCCTCATGTGCTTAGACAAGAACCAGAGGCATCTTTTTTGGNATATGGGCTTCCAAGTGATTCGGACTACAGTGTTATGATCCTCACTAGATTTTGTTAACTTTTAACTGACCCTGTTGTGTACCATACTTAATGGTTGCTCAGAGATTAGTTGGAGTGTTGTCTCATANT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15571#1 ------------------------------------------------------------ consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 GAGCCGAGAGCGCAACAAAAGGAAAGCAGGGAAACCTCGCCGTCCTCTCTCTCCATCCAT 60 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 ------------------------------------------------------------ consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 GCCCTAGCACGCGCCGCGCAGCCTACGAGCGGGAGCCACACCTCGAGGTCTTCATCTGTT 120 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 ------------------------------------------------------------ consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 GCACTCATGATTTAGCACCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGT 180 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 ------------------------------------------------------------ consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 TGCTAGGATAAAAATCTCAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGG 240 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 -------------------------------------AAACGAATTCGCCTTGGACCTGA 23 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 GGCCTGTTACTTCAACAACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTG 300 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 CTGGACTGAAGAGTAAAGTTTCTAATGTTC-ATGTGTTCTTCTGGCACTTGTTGGACTTG 82 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 CAGAATTCTACAATACTGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTG 360 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 TGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGTGTCCTGCACATATCCAATATGA 142 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 TGAATGCTCTTCGCCAAGGTTTTGAGAAACGATTCAGTGTCCTGCACATATCCAATATGA 420 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 TACTTGCTATCTGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCG 202 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 TACTTGCTATCGGCAGTATGATCTTCCATGCCACCTTACAGCACGTTTTACAGCAGAGCG 480 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 ATGAGACTCCAATGGTGTGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACT 262 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 ATGAGACTCCAATGGTGTGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACT 540 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 GGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAG 322 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 GGCATTACCGGAGCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAG 600 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 TCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCC 382 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 TCCATTTCCTGGTGCGATTCCAAGTGGTATTCAAGTTGCATTACGTTGGCCTCTGTCTCC 660 consensus_15571#2 -----------------------------------------------GGCCGCTAATTCC 13 consensus_15571#1 TATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTC 442 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 TATGCATCCCACGGATGTACAAGTACTACATACAAACTAAAGACATGGCTGCCAAGCGTC 720 consensus_15571#2 CTTGGACCTGACTGGACTGAAGGAGTAGAAACTCTCCATCCATGCCCTAGCACGCGCCGC 73 consensus_15571#1 TAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAA 502 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 TAGCAAAGCTGTGGGTTCTTACGTTGAGCTTGGCGACTCTTTGCTGGCTATTTGATCGAA 780 consensus_15571#2 GCAGCCTACGAGCGGGAGCCGCACCTCGAGGTCTTCATCTGTTGCACTCATGATTTAGCA 133 consensus_15571#1 TGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATA 562 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 TGTTCTGTAAGAAGCTTTCACATTGGTACGTCAACCCACAAGGGCACGCATGGTGGCATA 840 consensus_15571#2 CCAGCTGAAGTGACCTCTGAGACTGCGCGGTGACGTAGCCTGTTGCTAGGATAAAAATCT 193 consensus_15571#1 TTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTNCCGAGCTCAAC 622 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 TTCTCATGGGATTTAACTCATACTTTGCAAACACATTCTTAATGTTTTGCCGAGCTCAAC 900 consensus_15571#2 CAGTAGTTAAGCATGGCGGATTCTATGGTGTCAAGTTTCTGGGGGCCTGTT-ACTTCAAC 252 consensus_15571#1 AGCGTGGGTGGGAGCCCAAAATTACCCACC-TTTTCGGGT----TCTTGCCTTATG-TCA 676 consensus_15571#3 ----------------AGGTACCGTCCGGAATTCCCGGGT----CAGACCCACGCG-TCC 39 consensus_15571#0 AGCGTGGGTGGGAGCCCAAAATTACCCACC-TTTTCGGGT----TCTTGCCTTATG-TCA 954 consensus_15571#2 AACTGAGCTCTGCGAGGAAAATTATGCACACTCGTCATATATTGCAGAATTCTACAATAC 312 * * * * * * consensus_15571#1 AGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCT---ATTTGTCAGTGCTGTTCTCCA 733 consensus_15571#3 GGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCT---ATTTGTCAGTCCTGTTCTCCA 96 consensus_15571#0 AGATTCAGAAACCCCAAAAGAGGGAATGAGTTCTCT---ATTTGTCAGTGCTGTTCTCCA 1011 consensus_15571#2 TGTTTCTAATGTTCCATGTGTTCTTCTGGCACTTGTTGGACTTGTGAATGCTCTTCGCCA 372 * *** * *** * ** * * * **** * * ** *** *** consensus_15571#1 GGACCTT-AAAGCCAACGCCCTCATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTG-T 791 consensus_15571#3 GGACCTTGAAAGCCAACGCCCTCATGTGCTTAGACAAGAACCAGAGGCATCTTTTTTGGN 156 consensus_15571#0 GGACCTT-AAAGCCAACGCCCTCATGTGCTTAGACAAGAAGCAGAGGCATTTTTTTTG-T 1069 consensus_15571#2 AGGTTTTGAGAAACGATTCAGTGTCCTGCACATATCC-AATATGATACTTGCTATCGGCA 431 * ** * * * * * * *** * * ** ** * * * * * consensus_15571#1 ATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACT-AGATTTTGTTA 850 consensus_15571#3 ATATGGGCTTCCAAGTGATT-CGGACTACAGTGTTATGAT-CCTCACT-AGATTTTGTTA 213 consensus_15571#0 ATATGGGCTTCCAAGTGATTACGGACTACAGTGTTATGATGCCTCACT-AGATTTTGTTA 1128 consensus_15571#2 GTATGATCTTCCATGCCACCTTACAGCAC-GTTTTACAGCAGAGCGATGAGACTCCAATG 490 **** ****** * * * ** ** *** * * *** * * consensus_15571#1 ACTTTTAACTAA-CGCCTGTTTTGTACCATACTTAATT-GTTGCTCAGAGATTAGTTGGA 908 consensus_15571#3 ACTTTTAACTGA-C-CCTGTTGTGTACCATACTTAATG-GTTGCTCAGAGATTAGTTGGA 270 consensus_15571#0 ACTTTTAACTAA-CGCCTGTTTTGTACCATACTTAATT-GTTGCTCAGAGATTAGTTGGA 1186 consensus_15571#2 GTGTGGGGAGATTCTCCTATATCTTTATGTACTTTATTCACCAGACTGGCATTA-CCGGA 549 * * *** * * ***** ** * * **** *** consensus_15571#1 GTGTTGTCTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTA 968 consensus_15571#3 GTGTTGTCTCATANT--------------------------------------------- 285 consensus_15571#0 GTGTTGTCTCATAGTTTTGGTCATTATTTTTTGTTTCTCTACATTTGATTTTCCGTTCTA 1246 consensus_15571#2 GCACTATGCCTACTTTCCTTTTCCTATACGGTGCTGCTTTTGCAGTAGTCCATTTCCTGG 609 * * * * * consensus_15571#1 ATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCA 1028 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 ATAGGACTGAATTTTATTTGTTTTTTGTTTGTCTTGAATGTTGTCGAACAGTTTTAGTCA 1306 consensus_15571#2 TGCGATTCCAAGTGGATTTCAAGTTGCATTACGTTGGCCTCTGTC--------------- 654 consensus_15571#1 AGTTACTGCTTCATATGGCCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1088 consensus_15571#3 ------------------------------------------------------------ consensus_15571#0 AGTTACTGCTTCATATGGCCATAGATTGATCTTCTGATGGTTCAATTAAAAAAAAAAA-- 1364 consensus_15571#2 ------------------------------------------------------------ consensus_15571#1 AAAAAAAA 1096 consensus_15571#3 -------- consensus_15571#0 -------- consensus_15571#2 -------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||