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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15619#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2572 fasta sequence
[AGGGCTCGTATTTGGCAGCAATGCTGTGATTACGAATGGACGGGTATTTGTTGTAAATGAAGGAGATTCATTTCTAACTGATGATTTAGGCCTGCTTGAGTCTATGGAGTACGAATTGAGAACAAAACACATTTATGAAATAATTGAAGAGATCGAATGGACAGGTGTCGACCCT-GATGACCTGACAAGCAAATTCTACAGCGATGTCGCCATGTTGATTTCATCATCAATGTCTATTCGTGAAAGGCCATCCGAAAGAGCCCATTTTGAAATTTTGCATGCAGAGCACAGTGCTATTAAACTGAACGGTATGAGTTCAGGTGTTCATATCGATGCTGTCATTGACCCACTAAGTCCTGCTGGGCAAAAACTTGCTCCACTC-TTACGCATTCTCTGGAGACAGATTCAGCCGAGCATGAGAATTGTTCTGAATCCTATTAGTTCTCTTGCGGATCTACCTTTAAAGAACTATTATAGATTTGTTCTTCCATCAATGGACGATTTTAGCAGTACCGATTATTCTGTGCATGGACCTAAAGCTTTCTTCGCAAATATGCCACTATCGAAAACACTTACGATGAACATTGATGTCCCTGAACCATGGCTTGTTGAACCTGTCATTGCCATCCATGATCTGGACAACATTTTATTGGAGAATCTCGGTGATGTTAGAACATTGCAGGCAGTGTTTGAACTTGAAGCACTCCTCTTGACAGGCCATTGCAAGGAAAAGGATAGAGACCCTCCCAGGGGTCTTCAGTTTATCCTTGGTACCAAACGAAGACCACACTTGGTAGATACGCTTGTCATGGCCAACTTGGGTTACTGGCAGATGAAAGTTTCCCCTGGTGTATGGTACCTACAATTAGCGCCTGGTCGTAGTGCAGATTTGTATG-AGCTACCTTCAAAACTCATTGCCATTGATAGCTTGAGGGGCAAACTTATGCACATTGAAGTTCAAAAGAGAGGAGGAAAAGAGCACGAGGAC-TTGCTAAATGC-TGATGATGACAACCAC-TTCCAGGAAAAGATGGATAACAAAGGC-TGGAATAACAACC-TTTTGAAGTGGGCTTCTAGTTTCATTAGTGGCGACTCATCATCAAAAAAGAAGGATGAGAAAATCTCTGACCTTAAAGCTGCAAGACAAGGGGAGACAATCAACATTTTCTCTGTTGCTTCTGGGCATCTGTATGAACGTTTCCTCAAGATAATGATTTTGAGTGTATTAAAGCAAACACAAAGACCTGTGAAATTCTGGTTCATAAAGAACTATCTATCTCCACAGTTCAAGGATGTCATACCCCATATGGCCCAGGAATATGGATTTGAGTACGAGCTTGTCACATATAAATGGCCAACATGGTTGCACAAACAGAAAGAGAAGCAGCGAATTATATGGGCATACAAGATCTTGTTTCTAGATGTCATATTTCCACTTTCACTGAGGAAGGTTATTTTTGTTGACGCAGATCAAATTGTGAGAGCAGACATGGGAGAACTGTATGACATGAATCTGAAGGGTCGTCCCCTTGCGTATACTCCATTCTGCGATAACAACAAGGAGATGGATGGCTATCGATTTTGGAAGCAAGGTTTCTGGAAAGATCATCTGCGAGGAAGACCATACCACATCAGTGCTCTTTATGTTGTTGATTTGGCCAAATTTCGGCAAACTGCTTCTGGAGATACTCTACGGGTCTTCTATGAAACACTCAGCAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCC-AAATTATGCTCAGCATACTGTGCCCATATTCTCTCTCCCTC-AAGAATGGCTATGG-TGTG-AATCTTGGTGTGGAAATGCCAC-AAAGGCAA-GAGCAAAA-ACCA-TTGATC-TTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGATAAAGGCGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCAGATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCC-GAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTGTTGGTATTCCAAAAAAAAAGAAGTTTGTGTATTTGATACGTGGAAATTTGATGCTCATTTTTCTAAGATAGGAATTTCGAAAGACGCACCAGAAAAAGGGCGTTGCAGAGTTT]
[+] EMBL CB672578 [AGGGCTCGTATTTGGCAGCAATGCTGTGATTACGAATGGACGGGTATTTGTTGTAAATGAAGGAGATTCATTTCTAACTGATGATTTAGGCCTGCTTGAGTCTATGGAGTACGAATTGAGAACAAAACACATTTATGAAATAATTGAAGAGATCGAATGGACAGGTGTCGACCCT GATGACCTGACAAGCAAATTCTACAGCGATGTCGCCATGTTGATTTCATCATCAATGTCTATTCGTGAAAGGCCATCCGAAAGAGCCCATTTTGAAATTTTGCATGCAGAGCACAGTGCTATTAAACTGAACGGTATGAGTTCAGGTGTTCATATCGATGCTGTCATTGACCCACTAAGTCCTGCTGGGCAAAAACTTGCTCCACTC TTACGCATTCTCTGGAGACAGATTCAGCCGAGCATGAGAATTGTTCTGAATCCTATTAGTTCTCTTGCGGATCTACCTTTAAAGAACTATTATAGATTTGTTCTTCCATCAATGGACGATTTTAGCAGTACCGATTATTCTGTGCATGGACCTAAAGCTTTCTTCGCAAATATGCCACTATCGAAAACACTTACGATGAACATTGATGTCCCTGAACCATGGCTTGTTGAACCTGTCATTGCCATCCATGATCTGGACAACATTTTATTGGAGAATCTCGGTGATGTTAGAACATTGCAGGCAGTGTTTGAACTTGAAGCACTCCTCTTGACAGGCCATTGCAAGGAAAAGGATAGAGACCCTCCCAGGGGTCTTCAGTTTATCCTTGGTACCAAACG AGAACACACTTGGTAGATACGCTTGTCATGGCCAACT ]
[+] EMBL CB634324 [ GGGCTTGAATTTGGCAGCAATGCTGTGATTACGAATGGACGGGTATTTGTTGTAAATGAAGGAGATTCATTTCTAACTGATGATTTAGGCTTGCTTGAGTCTATGGAGTACGAATTGAGAACAAAACACATTTATGAAATAATTGAAGAGATCGAATGGACAGGTGTCGACCCT GATGACCTGACAAGCAAATTCTACAGCGATGTCGCCATGTTGATTTCATCATCAATGTCTATTCGTGAAAGGCCATCCGAAAGAGCCCATTTTGAAATTTTGCATGCAGAGCACAGTGCTATTAAACTGAACGGTATGAGTTCAGGTGTTCATATCGATGCTGTCATTGACCCACTAAGTCCTGCTGGGCAAAAACTTGCTCCACTC TTACGCATTCTCTGGAGACAGATTCAGCCGAGCATGAGAATTGTTCTGAATCCTATTAGTTCTCTTGCGGATCTACCTTTAAAGAACTATTATAGATTTGTTCTTCCATCAATGGACGATTTTAGCAGTACCGATTATTCTGTGCATGGACCTAAAGCTTTCTTCGCAAATATGCCACTATCGAAAACACTTACGATGAACATTGATGTCCCTGAACCATGGCTTGTTGAACCTGTCATTGCCATCCATGATCTGGACAACATTTTATTGGAGAATCTCGGTGATGTTAGAACATTGCAGGCAGTGTTTGAACTTGAAGCACTCCTCTTGACAGGCCATTGCAAGGAAAAGGATAGAGACCCTCCCAGGGGTCTTCAGTTTATCCTTGGTA CAAACGAAGAACACACTTGGTAGATACGCTTGTCATGGCCAACTTGGGTTACTGGCAGATGAAAGTTT CCCTGGT ]
[+] EMBL AU070244 [ TTTAGGCCTGCTTGAGTCTATGGAGTACGAATTGAGAACAAAACACATTTATGAAATAATTGAAGAGATCGAATGGACAGGTGTCGACCCTGGATGACCTGACAAGCAAATTCTACAGCGATGTCGCCATGTTGATTTCATCATCAATGTCTATTCGTGAAAGGCCATCCGAAAGAGCCCATTTTGAAATTTTGCATGCAGAGCACAGTGCTATTAAACTGAACGGTATGAGTTCAAGTGTTCANATCGATGCTGTCATTGACCCACTAAGTCCTGCTGGGCAAAAAC TGCTCCACTCTTTACGCATTCTCTGGAGACAGATTCAGNCGAGCATGAGAAATGNTCTGga ]
[+] EMBL CB629555 [ GGAGAATCTCGGTGATGTTAGAACATTGCAGGCAGTGTTTGAACTTGAAGCACTCCTCTTGACAGGCCATTGCAAGGAAAAGGATAGAGACCCTCCCAGGGGTCTTCAGTTTATCCTTGGTACCAAACGAAGACCACACTTGGTAGATACGCTTGTCATGGCCAACTTGGGTTACTGGCAGATGAAAGTTTCCCCTGGTGTATGGTACCTACAATTAGCGCCTGGTCGTAGTGCAGTTTTGAAGGTAGCT CATACAAATCTCATTGCCATTGATAGCTTGAGGGGCAAACTTATGCACATTGAAGTGCAAAAGAGAGGAGGAAAAGAGCACGAGGAC TTGCTAAATGC TGATGATGACAACCAC TTCCAGGAAAAGATGGATAACAAAGGC TGGAATAACAACC TTTTGAAGTGGGCTTCTAGTTTCATTAGTGGCGACTCATCATCAAAAAAGAAGGATGAGAAAATCTCTGACCTTAAAGCTGCAAGACAAGGGGAGACAATCAACATTTTCTCTGTTGCTTCTGGGCATCTGTATGAACGTTTCCTCAAGATAATGATTTTGAGTGTATTAAAGCAAACACAAAGACCTGTGAAATTCTGGTTCATAAAGAACTATCTATCTCCACAGTTCAAGGATGTCATACCCCATATGGCCCAGGAATATGGATTTGAGTACGAGCTTGTCACATATAAATGGCCAACATGGTTGCACAAACAGAAAGAGAAGCAGCGAATTATATGGGCATACAAGATCTTGTTTCTAGATGTCATATTTCCACTTTCACTGANGAAGGTTATTTTTGTTGACGCAGA ]
[+] EMBL AU032095 [ AGTGTTTGAACTTGAAGCACTCCTCTTGACAGGCCATTGCAAGGAAAAGGATAGAGACCCTCCCAGGGGTCTTCAGTTTATCCTTGGTACCAAACGAAGACCACACTTGGTAGATACGCTTGTCATGGCCAACTTGGGTTACTGGCAGATGAAAGTTTCCCCTGGTGTATGGTACCTACAATTAGCGCCTGGTCGTAGTGCAGATTTGTATG AGCTACCTTCAAAACTCATTGCCATTGATAGCTTGAGGGGCAAACTTATGCACATTGAAGTTCAAAAGAGAGGAGGAAAAGAGCACGAGGACTTTGCTAAATGCTTGATGATGACAACCACTTTCCAGGGAAAGATGGATAACAAAGGCTTGGATTAACAACCTTTTTGAAGTGGGCTTCTAGTTTCATTAGTNGCGACTCATCATCAAAAAAGAAGGTTGNGAAAATCTCT ]
[+] EMBL CF322901 [ TCAGTTTATCCTTGGTACCAAACGAAGACCACACTTGGTAGATACGCTTGTCATGGCCAACTTGGGTTACTGGCAGATGAAAGTTTCCCCTGGTGTATGGTACCTACAATTAGCGCCTGGTCGTAGTGCAGATTTGTATG AGCTACCTTCAAAACTCATTGCCATTGATAGCTTGAGGGGCAAACTTATGCACATTGAAGTTCAAAAGAGAGGAGGAAAAGAGCACGAGGAC TTGCTAAATGC TGATGATGACAACCAC TTCCAGGAAAAGATGGATAACAAAGGC TGGAATAACAACC TTTTGAAGTGGGCTTCTAGTTTCATTAGTGGCGACTCATCATCAAAAAAGAAGGATGAGAAAATCTCTGACCTTAAAGCTACAAGACAAGGGGAGACAATCAACATTTTCTCTGTTGCTTCTGGGCATCTGTATGAACGTTTCCTCAAGATAATGATTTTGAGTGTATTAAAGCAAACACAAAGACCTGTGAAATTCTGGTTCATAAAGAATTATCTATCTCCACAGTTCAAGGATGTCATACCCCATATGGCCCAGGAATATGGATNTGAGTACGAGCTTGTCACATATAAATGGCCAACATGGTTGCACAAACAGAAAGAGAAGCAGCGAATTAT ]
[+] EMBL OSR28111A [ gGGATTTGAGTACGAGCTTGTCACATATAAATGGCCAACATGGTTGCACAAACAGAAAGAGAAGCAGCGAATTATATGGGCATACAAGATCTTGTTTCTAGATGTCATATTTCCACTTTCACTGAGGAAGGTTATTTTTGTTGACGCAGATCAAATTGTGAGAGCAGACATGGGAGAACTGTATGACATGAATCTGAAGGGTCGTCCCCTTGCGTATACTCCATTCTGCGATAACAACAAGGAGATGGATGGCTATCGATTTTGGAAGCAAGGTTTCTGGAAAGATCATCTGCGAGGAAGACCATACCACATCAGTGCTCTTTATGTTGTTGATTT ]
[+] EMBL AK059298 [ ACATATAAATGGCCAACATGGTTGCACAAACAGAAAGAGAAGCAGCGAATTATATGGGCATACAAGATCTTGTTTCTAGATGTCATATTTCCACTTTCACTGAGGAAGGTTATTTTTGTTGACGCAGATCAAATTGTGAGAGCAGACATGGGAGAACTGTATGACATGAATCTGAAGGGTCGTCCCCTTGCGTATACTCCATTCTGCGATAACAACAAGGAGATGGATGGCTATCGATTTTGGAAGCAAGGTTTCTGGAAAGATCATCTGCGAGGAAGACCATACCACATCAGTGCTCTTTATGTTGTTGATTTGGCCAAATTTCGGCAAACTGCTTCTGGAGATACTCTACGGGTCTTCTATGAAACACTCAGCAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCC AAATTATGCTCAGCATACTGTGCCCATATTCTCTCTCCCTC AAGAATGGCTATGG TGTG AATCTTGGTGTGGAAATGCCAC AAAGGCAA GAGCAAAA ACCA TTGATC TTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGATAAAGGCGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCAGATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCC GAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTG ]
[+] EMBL CF196921 [ TCTAGATGTCATATTTCCACTTTCACTGAGGAAGGTTATTTTTGTTGACGCAGATCAAATTGTGAGAGCAGACATGGGAGAACTGTATGACATGAATCTGAAGGGTCGTCCCCTTGCGTATACTCCATTCTGCGATAACAACAAGGAGATGGATGGCTATCGATTTTGGAAGCAAGGTTTCTGGAAAGATCATCTGCGAGGAAGACCATACCACATCAGTGCTCTTTATGTTGTTGATTTGGCCAAATTTCGGCAAACTGCTTCTGGAGATACTCTACGGGTCTTCTATGAAACACTCAGCAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCC AAATTATGCTCAGCATACTGTGCCCATATTCTCTCTCCCTC AAGAATGGCTATGG TGTG AATCTTGGTGTGGAAATGCCAC AAAGGCAA GAGCAAAA ACCA TTGATC TTTGCAACAACCCAATGACAAAGGAGCCAAAGCTNNNNNNNGCCAAAAGAATTGTTCNNNNNNNGGTTGATCTTGACnnnnnnn ]
[+] EMBL OSR17151A [ TCTGCGATAACAACAAGGAGNTGGATGGCTATCGATTTTGGAAGCAAGGTTTCTGGAAAGATCATCTGCGAGGAAGACCATACCACATCAGTGCTCTTTATGTTGTTGATTTGGCCAAATTTCGGCAAACTGCTTCTGGAGNTACTCTACGGGTCTTCTATGAAACACTCAGCAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCCAAAATTATGCTCAGCATACTGTGCCCATATTCTCTCTCCCTCAAAGNATGGCTATGGNTGTGAAATCTTGGTGTGGGAATGCCACAAAAGGNAAGGAGCAAAANCCCATTTGATCTTTTGCAACc ]
[+] EMBL OSR18571A [ TCTGCGATAACAACAAGGAGATGGATGGCTATCGATTTTGGAAGCAAGGTTTCTGGAAAGATCATCTGCGAGGAAGACCATACCACATCAGTGCTCTTTATGTTGTTGATTTGGCCAAATTTCGGCAAACTGCTTCTGGAGATACTCTACGGGTCTTCTATGAAACACTCAGCAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCC AAATTATGCTCAGCATACTGTGCCCATATTCTCTCTCCCTC AAGAATGGCTATGG TGTG AATCTTGGTGTGGAAATGCCAC AAAGGCAA GAGCAAAA ACCA TTGATC TTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGA ]
[+] EMBL CA767112 [ GAAAGATCATCTGCGAGGAAGACCATACCACATCAGTGCTCTTTATGTTGTTGATTTGGCCAAATTTCGGCAAACTGCTTCTGGAGATACTCTACGGGTCTTCTATGAAACACTCAGCAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCC AAATTATGCTCAGCATACTGTGCCCATATTCTCTCTCCCTC AAGAATGGCTATGG TGTG AATCTTGGTGTGGAAATGCCAC AAAGGCAA GAGCAAAA ACCA TTGATC TTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCC ]
[-] EMBL CB634325 [ CGGGTCTTCTATGAAACACTCAGCAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCC AAATTATGCTCAGCATACTGTGCCCATATTCTCTCTCCCTC AAGAATGGCTATGG TGTG AATCTTGGTGTGGAAATGCCAC AAAGGCAA GAGCAAAA ACCA TTGATC TTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGATAAAGGCGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCACATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCC GAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTGGGGAATGTTAGATACTTTGGTGTTGGTATTCCAAAAATAAAGA ]
[-] EMBL CB629556 [ CGGGTCTTCTATGAAACACTCAGCAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCC AAATTATGCTCAGCATACTGTGCCCATATTCTCTCTCCCTC AAGAATGGCTATGG TGTG AATCTTGGTGTGGAAATGCCAC AAAGGCAA GAGCAAAA ACCA TTGATC TTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGATAAAGGCGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCACATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCC GAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTGGGCACCCAACAAAGCTCGAGAATGTTAGATcca ]
[-] EMBL CB646334 [ CCAC AAAGGCAA GAGCAAAA ACCA TTGATC TTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGATAAAGGCGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCAGATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCC GAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTGTTGGTATTCCAAAACATTTGTAGTTTGTGTATTTGATACGTGGAAATTTGATGCTCATTTTTCTAAGATAGGAATTTCGAAAGACGCACCAGAAAAAGGGCGTTGCAGAGTTT]
[+] EMBL AU184254 [ GCGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCAGATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCC GAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTGTTGGTATTCCAAAAAAA ]
[+] EMBL AU095515 [ CGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCAGATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCC GAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTGTTGGTATTCCAAAAA ]
[+] EMBL AU173243 [ TGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCAGATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCC GAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTGTTGGTATTCCAAAAAAA ]
[+] EMBL AU173209 [ ATGAAGTGCAGATACCATAATGTGCGAATCAATNGATGATCAATAATCAATGGTGGNGCCATTTTGCATTTTGTAGGGCTAACTGCCGGAAAATAGGTTCACNAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATNCCAATTNGTGTANTAAGATGTTCTTCCTGGGACGCTGTANAGTTTATTGGCANCTGCCAGTTGAAAGCTAGTATTAGCAATNTGGCANCCCNANAATTTTGTAAAAGNTGGCACCCAANAAAGCTCGAGAATGTAANATNCTTTGGTGTTGGTATTNCAAAAAAA ]
consensusID : consensus_15619#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1073 fasta sequence
[AAGGGATTCAACGATAATGGTCCCGGTTTCCATCAACTTAAACCGGCAGAGCGGGAAAACCCCATAGGGATGGGACGGCCCCTAAACACAGGAAAATGATGCATATTTAAGTGCCCCTGGGAACCCATCTCATAACACAAGAAAGGATGCCACGATTTGAAGCAGGTTTGGAAAGTCTCTCAAGGAAGCCAACCACAACAGTCTCTTATGTTGTGAATGGCCAATTTCGCAAACTGCTCTGGAATACTCTACGGGTCTTCTATGAACACTCACAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCCAAATTATGCTCAGCATACTGTGCCCATA-TCTCTCTCCCTCAAGAATGGCTATGGTGTGAATCTTGGTGTGGAAATGCCACAAAGGCAAGAGCAAAAACCATTGATCTTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGATAAAGGCGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCACATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCCG-AAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTGTTGGTATTCCAAAGGCATTTGTAGTTTGTGTAAAAAAAAAAAAAAAACTTAAAAGA]
[-] EMBL BE039601 [AAGGGATTCAACGATAATGGTCCCGGTTTCCATCAACTTAAACCGGCAGAGCGGGAAAACCCCATAGGGATGGGACGGCCCCTAAACACAGGAAAATGATGCATATTTAAGTGCCCCTGGGAACCCATCTCATAACACAAGAAAGGATGCCACGATTTGAAGCAGGTTTGGAAAGTCTCTCAAGGAAGCCAACCACAACAGTCTCTTATGTTGTGAATGGCCAATTTCGCAAACTGCTCTGGAATACTCTACGGGTCTTCTATGAACACTCACAAAGACCCCAATAGTCTCTCAAATCTTGATCAGGATCTCCCAAATTATGCTCAGCATACTGTGCCCATA TCTCTCTCCCTCAAGAATGGCTATGGTGTGAATCTTGGTGTGGAAATGCCACAAAGGCAAGAGCAAAAACCATTGATCTTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGATAAAGGCGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCACATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCCG AAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCT ]
[-] EMBL CB672579 [ GCTCAGCATACTGTGCCCATATTCTCTCTCCCTCAAGAATGGCTATGGTGTGAATCTTGGTGTGGAAATGCCACAAAGGCAAGAGCAAAAACCATTGATCTTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCCCGCCATTTGATACACCAAAGTCAGATGATAAAGGCGCAAAACATGATGAGCTATGATACCCCAGCCGCTTTGGAGGCAAGGATTCTTCACACTGACTGTAGTTTTTTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAAGTGCAGATACCATAATGTGGGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTTGCATTTTGTAGGGCTAACTGCCG AAAATAGGTTCACGAAGGGGTTTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTTTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATTTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTGTTGGTATTCCAAAGGCATTTGTAGTTTGTGTAAAAAAAAAAAAAAAACTTAAAAGA]
[+] EMBL AA750622 [ AAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCCAGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAATCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGAT AAGGC AAACATGATGAG TATGATACA CAGCCGCTTTGGAGGCAAGG TT TTCACACTGACTGTAGTTCTCTG ]
[+] EMBL BI809228 [ GGCTAACTGCCGAAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTTCAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTGGGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGCCCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTTAGATACTTTGGTGTTGGTATTCCAAAAACATTTGTAGTTTGTGTAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15619#0 AGGGCTCGTATTTGGCAGCAATGCTGTGATTACGAATGGACGGGTATTTGTTGTAAATGA 60
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 AGGAGATTCATTTCTAACTGATGATTTAGGCCTGCTTGAGTCTATGGAGTACGAATTGAG 120
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 AACAAAACACATTTATGAAATAATTGAAGAGATCGAATGGACAGGTGTCGACCCTGATGA 180
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 CCTGACAAGCAAATTCTACAGCGATGTCGCCATGTTGATTTCATCATCAATGTCTATTCG 240
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 TGAAAGGCCATCCGAAAGAGCCCATTTTGAAATTTTGCATGCAGAGCACAGTGCTATTAA 300
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 ACTGAACGGTATGAGTTCAGGTGTTCATATCGATGCTGTCATTGACCCACTAAGTCCTGC 360
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 TGGGCAAAAACTTGCTCCACTCTTACGCATTCTCTGGAGACAGATTCAGCCGAGCATGAG 420
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 AATTGTTCTGAATCCTATTAGTTCTCTTGCGGATCTACCTTTAAAGAACTATTATAGATT 480
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 TGTTCTTCCATCAATGGACGATTTTAGCAGTACCGATTATTCTGTGCATGGACCTAAAGC 540
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 TTTCTTCGCAAATATGCCACTATCGAAAACACTTACGATGAACATTGATGTCCCTGAACC 600
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 ATGGCTTGTTGAACCTGTCATTGCCATCCATGATCTGGACAACATTTTATTGGAGAATCT 660
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 CGGTGATGTTAGAACATTGCAGGCAGTGTTTGAACTTGAAGCACTCCTCTTGACAGGCCA 720
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 TTGCAAGGAAAAGGATAGAGACCCTCCCAGGGGTCTTCAGTTTATCCTTGGTACCAAACG 780
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 AAGACCACACTTGGTAGATACGCTTGTCATGGCCAACTTGGGTTACTGGCAGATGAAAGT 840
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 TTCCCCTGGTGTATGGTACCTACAATTAGCGCCTGGTCGTAGTGCAGATTTGTATGAGCT 900
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 ACCTTCAAAACTCATTGCCATTGATAGCTTGAGGGGCAAACTTATGCACATTGAAGTTCA 960
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 AAAGAGAGGAGGAAAAGAGCACGAGGACTTGCTAAATGCTGATGATGACAACCACTTCCA 1020
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 GGAAAAGATGGATAACAAAGGCTGGAATAACAACCTTTTGAAGTGGGCTTCTAGTTTCAT 1080
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 TAGTGGCGACTCATCATCAAAAAAGAAGGATGAGAAAATCTCTGACCTTAAAGCTGCAAG 1140
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 ACAAGGGGAGACAATCAACATTTTCTCTGTTGCTTCTGGGCATCTGTATGAACGTTTCCT 1200
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 CAAGATAATGATTTTGAGTGTATTAAAGCAAACACAAAGACCTGTGAAATTCTGGTTCAT 1260
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 AAAGAACTATCTATCTCCACAGTTCAAGGATGTCATACCCCATATGGCCCAGGAATATGG 1320
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 ATTTGAGTACGAGCTTGTCACATATAAATGGCCAACATGGTTGCACAAACAGAAAGAGAA 1380
consensus_15619#1 ------------------------------------------------------------
consensus_15619#0 GCAGCGAATTATATGGGCATACAAGATCTTGTTTCTAGATGTCATATTTCCACTTTCACT 1440
consensus_15619#1 ------------AAGGGATTCAACGATAATGGTCCCGGTTTCCATCAACTTAAACCGGCA 48
* *** * * *** ** * * * * *** * *
consensus_15619#0 GAGGAAGGTTATTTTTGTTGACGCAGATCAAATTGTGAGAGCAGACATGGGAGAACTGTA 1500
consensus_15619#1 GAGCG-GGAAAACCCCATAGGGATGGGACGGCCCCTAA------ACACAGGAAAA----- 96
*** ** * * * * * * * *** *** **
consensus_15619#0 TGACATGAATCTGAAGGGTCGTCCCCTTGCGTATACTCCATTCTGCGATAACAACAAGGA 1560
consensus_15619#1 TGATGCATATTTAA------GTGCCCCTGGG---AACCCATCTC---ATAACA-CAAGAA 143
*** ** * * ** *** ** * * **** ****** **** *
consensus_15619#0 GATGGATGGCTATCGATTTTGGAAGCAAGGTTTCTGGAAAGATCATCTGCGAGGAAGACC 1620
consensus_15619#1 A--GGATGCCA--CGATTT--GAAGCAGG---TTTGGAAAG----TCTCTCAAGGAAGCC 190
***** * ****** ****** * * ******* *** * * * **
consensus_15619#0 ATACCACATCAGTGCTCTTTATGTTGTTGATTTGGCCAAATTTCGGCAAACTGCTTCTGG 1680
consensus_15619#1 A-ACCACAACAGT--CTCTTATGTTGTGAA--TGGCCAA--TTTCGCAAACTGCT-CTGG 242
* ****** **** ********* * ******* ** ********** ****
consensus_15619#0 AGATACTCTACGGGTCTTCTATGAAACACTCAGCAAAGACCCCAATAGTCTCTCAAATCT 1740
consensus_15619#1 A-ATACTCTACGGGTCTTCTATGAA-CACTCA-CAAAGACCCCAATAGTCTCTCAAATCT 299
* *********************** ****** ***************************
consensus_15619#0 TGATCAGGATCTCCCAAATTATGCTCAGCATACTGTGCCCATATTCTCTCTCCCTCAAGA 1800
consensus_15619#1 TGATCAGGATCTCCCAAATTATGCTCAGCATACTGTGCCCATAT-CTCTCTCCCTCAAGA 358
******************************************** ***************
consensus_15619#0 ATGGCTATGGTGTGAATCTTGGTGTGGAAATGCCACAAAGGCAAGAGCAAAAACCATTGA 1860
consensus_15619#1 ATGGCTATGGTGTGAATCTTGGTGTGGAAATGCCACAAAGGCAAGAGCAAAAACCATTGA 418
************************************************************
consensus_15619#0 TCTTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCC 1920
consensus_15619#1 TCTTTGCAACAACCCAATGACAAAGGAGCCAAAGCTTCAGGGTGCCAAAAGAATTGTTCC 478
************************************************************
consensus_15619#0 AGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAA 1980
consensus_15619#1 AGAGTGGGTTGATCTTGACAGTGAAGCAAGGCAGTTCACAGCACGAATCTTGGGAGATAA 538
************************************************************
consensus_15619#0 TCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGATAAAGG 2040
consensus_15619#1 TCCGGAGTCACCAGGAACTACTTCCCCGCCATCTGATACACCAAAGTCAGATGATAAAGG 598
************************************************************
consensus_15619#0 CGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTG 2100
consensus_15619#1 CGCAAAACATGATGAGCTATGATACACCAGCCGCTTTGGAGGCAAGGATTCTTCACACTG 658
************************************************************
consensus_15619#0 ACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAA 2160
consensus_15619#1 ACTGTAGTTCTCTGGTGTCCCAGCAGTTAAAATCATATTGCTGGTTCAGGGGGCAATGAA 718
************************************************************
consensus_15619#0 GTGCAGATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTT 2220
consensus_15619#1 GTGCACATACCATAATGTGCGAATCAATCGATGATCAATAATCAATGGTGGTGCCATTTT 778
***** ******************************************************
consensus_15619#0 GCATTTTGTAGGGCTAACTGCCGAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTT 2280
consensus_15619#1 GCATTTTGTAGGGCTAACTGCCGAAAATAGGTTCACGAAGGGGTCTAGTTGGTAGTTTTT 838
************************************************************
consensus_15619#0 CAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTG 2340
consensus_15619#1 CAAGAACTTGTATACATAGAACACTGTAATCCCAATTCGTGTATTAAGATGTTCTTCCTG 898
************************************************************
consensus_15619#0 GGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGC 2400
consensus_15619#1 GGACGCTGTAAAGTTTATTGGCAACTGCCAGTTGAAAGCTAGTATTAGCAATCTGGCAGC 958
************************************************************
consensus_15619#0 CCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTGT 2460
consensus_15619#1 CCGAGAATTTTGTAAAAGTTGGCACCCAACAAAGCTCGAGAATGTAAGATACTTTGGTGT 1018
************************************************************
consensus_15619#0 TGGTATTCCAAAAAAAAA-GAAGTTTGTGTATTTGATACGTGGAAATTTGATGCTCATTT 2519
consensus_15619#1 TGGTATTCCAAAGGCATTTGTAGTTTGTGTAAAAAAAAAAAAAAAACTTAAAAGA----- 1073
************ * * ********** * * *** ** *
consensus_15619#0 TTCTAAGATAGGAATTTCGAAAGACGCACCAGAAAAAGGGCGTTGCAGAGTTT 2572
consensus_15619#1 -----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||