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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15663#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1542 fasta sequence
[TTCCTCGAGCACTGTTGGCCTACTGGCCAACTCACATCTCATCTCTTCGCTGCTGCTACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGT-GGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCTCGACAATGCTGCGGCCGCGACCACCTGCGCGGCGTCCCCCGAGAAGTCCCGCGCCGCCGACTTCGCCCGCGCTGCGGCGGCGTCTCTTCTCCCACCACCTACTCCAGCTTCGGTCAGTGCTAAGGCGACGAGGGTGTCTGGAGCCAAGGTGGCTGCCGCCAGGACTGCGGCGGCGGCTGCGGCCATGGGGGGCTTGGACAGGAGCAGGAAGCCCGCCAAGAAGGGCGGCGCCGCCGTGCTGCCGGTGGTGACGTTCGCGGGGCTCGAGGCGTACGAGCCCGCCGGGAGCATCGCGGCGGCGCAGCGGGAGCACGTCGCGATGGCGCAGGCGCAGCGCAAGATGCGGATCGCGCACTACGGCCGCACCGCGTCCTTCTCCCGAGTCGAAGGGAAAGTCAGCGCTACCGCGACGGGTGCCGCCGAGCTCGTCGCCGGTGCCGTCACCGGGCATGACGAGAAGCGATGCAGCTTCATCACTCCATATTCAGACCCCCTGTACGTCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTTGCTGTTCGAGATGCTCACGTTGTCCGGCGTGCAAGTCGGGGCGGACTGGACCTCGATCCTGAAGAGGAGACACGTCTACAGGGAGGCATTCTCCGGTTTCAACGTGGACGCTGTCGCCAAGTACACGGAGAAGCAGATGGCATCGCTAAG-CGCCGAGTTCGGCCTGGATTTGGGCACCATCAGAGGCGCCGTCAACAACGCCTGCCGGATTTCCGAGGTGAGGAGGGACTTCGGGTCGTTCAGCAAATACGTGTGGGCGTTC-GTAAACAACAAGCCGCTGTCGCCGAGCTACAAATACAGCCGGAAGATCCCGGTGAAGACGTCCAAGTCGGAGTCGATCAGCAAGGACATGGTGCGGCGCGGCTTCCGGTT-CGTCGGCCCCACCGTCAT-CCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGC-TCCTCCT-CCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAG-AAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTACGAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AK109346 [TTCCTCGAGCACTGTTGGCCTACTGGCCAACTCACATCTCATCTCTTCGCTGCTGCTACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGT GGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCTCGACAATGCTGCGGCCGCGACCACCTGCGCGGCGTCCCCCGAGAAGTCCCGCGCCGCCGACTTCGCCCGCGCTGCGGCGGCGTCTCTTCTCCCACCACCTACTCCAGCTTCGGTCAGTGCTAAGGCGACGAGGGTGTCTGGAGCCAAGGTGGCTGCCGCCAGGACTGCGGCGGCGGCTGCGGCCATGGGGGGCTTGGACAGGAGCAGGAAGCCCGCCAAGAAGGGCGGCGCCGCCGTGCTGCCGGTGGTGACGTTCGCGGGGCTCGAGGCGTACGAGCCCGCCGGGAGCATCGCGGCGGCGCAGCGGGAGCACGTCGCGATGGCGCAGGCGCAGCGCAAGATGCGGATCGCGCACTACGGCCGCACCGCGTCCTTCTCCCGAGTCGAAGGGAAAGTCAGCGCTACCGCGACGGGTGCCGCCGAGCTCGTCGCCGGTGCCGTCACCGGGCATGACGAGAAGCGATGCAGCTTCATCACTCCATATTCAGACCCCCTGTACGTCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTTGCTGTTCGAGATGCTCACGTTGTCCGGCGTGCAAGTCGGGGCGGACTGGACCTCGATCCTGAAGAGGAGACACGTCTACAGGGAGGCATTCTCCGGTTTCAACGTGGACGCTGTCGCCAAGTACACGGAGAAGCAGATGGCATCGCTAAG CGCCGAGTTCGGCCTGGATTTGGGCACCATCAGAGGCGCCGTCAACAACGCCTGCCGGATTTCCGAGGTGAGGAGGGACTTCGGGTCGTTCAGCAAATACGTGTGGGCGTTC GTAAACAACAAGCCGCTGTCGCCGAGCTACAAATACAGCCGGAAGATCCCGGTGAAGACGTCCAAGTCGGAGTCGATCAGCAAGGACATGGTGCGGCGCGGCTTCCGGTT CGTCGGCCCCACCGTCAT CCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGC TCCTCCT CCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAG AAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCA AGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTACGAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AU225592 [ gccgCTCTTCGCTGCTGCTACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGT GGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCTCGACAATGCTGCGGCCGCGACCACCTGCGCGGCGTCCCCCGAGAAGTCCCGCGCCGCCGACTTCGCCCGCGCTGCGGCGGCGTCTCTTCTCCCACCACCTACTCCAGCTTCGGTCAGTGCTAAGGCGACGAGGGTGTCTGGAGCCAAGGTGGCTGCCGCCAGGACTGCGGCGGCGGCTGCGGCCATGGGGGGC TGGACAGGAGCAGGAAG CCGCCCAGA ]
[+] EMBL AU066217 [ TCGCTGCTGCTACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCANAGCATTTTTNTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGT GGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCT ]
[+] EMBL AU197514 [ CGCTGCTGCTACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAA CGCGT GGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCT ]
[+] EMBL CB645940 [ CTGCTGCTACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGT GGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCTCGACAATGCTGCGGCCGCGACCACCTGCGCGGCGTCCCCCGAGAAGTCCCGCGCCGCCGACTTCGCCCGCGCTGCGGCGGCGTCTCTTCTCCCACCACCTACTCCAGCTTCGGTCAGTGCTAAGGCGACGAGGGTGTCTGGAGCCAAGGTGGCTGCCGCCAGGACTGCGGCGGCGGCTGCGGCCATGGGGGGCTTGGACAGGAGCAGGAAGCCCGCCAAGAAGGGCGGCGCCGCCGTGCTGCCGGTGGTGACGTTCGCGGGGCTCGAGGCGTACGAGCCCGCCGGGAGCATCGCGGCGGCGCAGCGGGAGCACGTCGCGATGGCGCAGGCGCAGCGCAAGATGCGGATCGCGCACTACGGCCGCACCGCGTCCTTCTCCCGAGTCGAAGGGAAAGTCAGCGCTACCGCGACGGGTGCCGCCGAGCTCGTCGCCGGTGCCGTCACCGGGCATGACGAGAAGCGATGCAGCTTCATCACTCCATATTCAGACCCCCTGTACGTCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTTGCTGTTCGAGATGCTCACGTTGTCCGGCGTGCAAGTCGGGG ]
[+] EMBL AU064445 [ CTGCTGCTACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGT GGCGGCGCCTGAAGCTGCNCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCT ]
[+] EMBL AU223396 [ CTGCTGCTACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGT GGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCT ]
[+] EMBL CB649997 [ TGCTGCTACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACACCATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGT GGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCTCGACAATGCTGCGGCCGCGACCACCTGCGCGGCGTCCCCCGAGAAGTCCCGCGCCGCCGACTTCGCCCGCGCTGCGGCGGCGTCTCTTCTCCCACCACCTACTCCAGCTTCGGTCAGTGCTAAGGCGACGAGGGTGTCTGGAGCCAAGGTGGCTGCCGCCAGGACTGCGGCGGCGGCTGCGGCCATGGGGGGCTTGGACAGGAGCAGGAAGCCCGCCAAGAAGGGCGGCGCCGCCGTGCTGCCGGTGGTGACGTTCGCGGGGCTCGAGGCGTACGAGCCCGCCGGGAGCATCGCGGCGGCGCAGCGGGAGCACGTCGCGATGGCGCAGGCGCAGCGCAAGATGCGGATCGCGCACTACGGCCGCACCGCGTCCTTCTCCCGAGTCGAAGGGAAAGTCAGCGCTACCGCGACGGGTGCCGCCGAGCTCGTCGCCGGTGCCGTCACCGGGCATGACGAGAAGCGATGCAGCTTCATCACTCCATATTCAGACCCCCTGTACGTCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTTGCTGTTCGAGATGCTCACGTTGTCCGGCGTGCAAGTCGGG ]
[+] EMBL CB644454 [ TACTCGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCGGCGGGGAACCGCGT GGCGGCGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCTCGACAATGCTGCGGCCGCGACCACCTGCGCGGCGTCCCCCGAGAAGTCCCGCGCCGCCGACTTCGCCCGCGCTGCGGCGGCGTCTCTTCTCCCACCACCTACTCCAGCTTCGGTCAGTGCTAAGGCGACGAGGGTGTCTGGAGCCAAGGTGGCTGCCGCCAGGACTGCGGCGGCGGCTGCGGCCATGGGGGGCTTGGACAGGAGCAGGAAGCCCGCCAAGAAGGGCGGCGCCGCCGTGCTGCCGGTGGTGACGTTCGCGGGGCTCGAGGCGTACGAGCCCGCCGGGAGCATCGCGGCGGCGCAGCGGGAGCACGTCGCGATGGCGCAGGCGCAGCGCAAGATGCGGATCGCGCACTACGGCCGCACCGCGTCCTTCTCCCGAGTCGAAGGGAAAGTCAGCGCTACCGCGACGGGTGCCGCCGAGCTCGTCGCCGGTGCCGTCACCGGGCATGACGAGAAGCGATGCAGCTTCATCACTCCATATTCAGACCCCCTGTACGTCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTTGCTGTTCGAGATGCTCACGTTGTCCGG ]
[+] EMBL OSC1881 [ AGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCCTCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCCGCCCGGTGCTGCAGCCNGCGGGGAACCG GTNNGCGCTGCCTGAAGCTGCCCGGCCGCTCAAGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCG ]
[-] EMBL CB644455 [ GAAGCGATGCAGCTTCATCACTCCATATTCAGACCCCCTGTACGTCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTTGCTGTTCGAGATGCTCACGTTGTCCGGCGTGCAAGTCGGGGCGGACTGGACCTCGATCCTGAAGAGGAGACACGTCTACAGGGAGGCATTCTCCGGTTTCAACGTGGACGCTGTCGCCAAGTACACGGAGAAGCAGATGGCATCGCTAAG CGCCGAGTTCGGCCTGGATTTGGGCACCATCAGAGGCGCCGTCAACAACGCCTGCCGGATTTCCGAGGTGAGGAGGGACTTCGGGTCGTTCAGCAAATACGTGTGGGCGTTC GTAAACAACAAGCCGCTGTCGCCGAGCTACAAATACAGCCGGAAGATCCCGGTGAAGACGTCCAAGTCGGAGTCGATCAGCAAGGACATGGTGCGGCGCGGCTTCCGGTT CGTCGGCCCCACCGTCAT CCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGC TCCTCCT CCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAG AAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGT ]
[-] EMBL CB649998 [ GAAGCGATGCAGCTTCATCACTCCATATTCAGACCCCCTGTACGTCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTTGCTGTTCGAGATGCTCACGTTGTCCGGCGTGCAAGTCGGGGCGGACTGGACCTCGATCCTGAAGAGGAGACACGTCTACAGGGAGGCATTCTCCGGTTTCAACGTGGACGCTGTCGCCAAGTACACGGAGAAGCAGATGGCATCGCTAAG CGCCGAGTTCGGCCTGGATTTGGGCACCATCAGAGGCGCCGTCAACAACGCCTGCCGGATTTCCGAGGTGAGGAGGGACTTCGGGTCGTTCAGCAAATACGTGTGGGCGTTC GTAAACAACAAGCCGCTGTCGCCGAGCTACAAATACAGCCGGAAGATCCCGGTGAAGACGTCCAAGTCGGAGTCGATCAGCAAGGACATGGTGCGGCGCGGCTTCCGGTT CGTCGGCCCCACCGTCAT CCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGC TCCTCCT CCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAGAAAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGT ]
[+] EMBL BI806224 [ CTAAGCCCCCGAGTTCGGCCTGGATTTGGCCACCATCAGAGGC CCGTCAACAACGCCTGCCGGATTTCCGAGGTGAGGAGGGACTTCGGGTCGTTCAGCAAATACGTGTGGGCGTTCTGTAAACAACAA CCGCTGTCGCCGAGCTACAAATACAGCCGGAAGATCCCGGTGAAGACGTCCAAGTCGGAGTCGATCAGCAAGGACATGGTGCGGCACGGCTTCCGGTT CGTC GCCCCACCGTCAT CCACTCGTTCATGCA GCC TCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGCGTCCTCCT CCTCCGCTTAACCGATCTGACCATCCCAAAAACAGTTACC GCCAGCTCCCCGAAGGAAGCAAGGAG AAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATA CCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTA AAAAAAAAA ]
[+] EMBL AU033124 [ GTCNAAGTCGGAGTCGATCAGCAAGGACATGGTGCGGCGCGGCTTCCGGTT CGTCGGCCCCACCGTCAT CCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGC TCCTCCT CCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAG AAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTNATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGT ]
[+] EMBL AU097252 [ tcgGATCAACAAGGACATGGTTCGGCGCGGCTTCCGGTN CGTCGGCCCCACCGTNATCCCACTCG TCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGC TCCTCCTCCCTNCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAG AAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTA ]
[+] EMBL AU033044 [ GTTCCGTCGGCCCCACCGTCAN CCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGC TCCTCCT CCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCNAGGAG AAAAAACAAGAAGGAAAGAGAAAAAGTNAGAGATGAGATANCCTCAAGTAGTAGTATACAGAACGGGTATTNATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAANCTTGATTGTCAAaaaaaaaaa ]
[+] EMBL AU175161 [ GTCAT CCACTCGTTCATGCAGNCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCGCGCCACCGCGTCTGC TCCTCCT CCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAG AAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTA ]
[+] EMBL AU033147 [ GTGNCATGCCCGCGCCAACGCGTCTGC TCCTCCT NCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAG AAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGT ]
consensusID : consensus_15663#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 921 fasta sequence
[TCGGAAGTCGATCAGCAAGGACATGGTTCCGGCGCGGCTTCCGGGTTCCGTCGGCCCCCACCGTCATCCACTCGTTCATGCAGGCCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCCGCGCCACCGCGTCTGCTCCTCCTCCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAGAAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTACGTATCACTTGGTGCGTGTCTTTCTTTTTTCTCTTTCCTTCATGTCTCGAGATAGAGATAGGGTGACGATCATTAGCGGGGTGGGCTACCCCAATCCCCAGTGCATGTGGCTTGATTAAAGCGGGATGAGATAGGCTCACAGTCACACAGGCAGGCAAGCAAGCAGGGTCAGGCCATGTGCTGCCGGCAAGCGCATGTGTAGGTGAGAGAGGGAGGGGAAGAAAAGCCTGCGCATGTGACACTGCAGCTCTTGCCCTCGCTAGCTCGTCCGTCCACCCGTCCGCGCTGTGCGCGCAGATGGGCGGACGCAGCGACGGACCCAGCCAGTGCACCATCCGGGCCACCGCGACACGCAAACACCTCCGGGCAGCCATGTCCACCGGGCCATTACTCCGCATGCACCATGCGCTGTATCATAGGATTTTCATCTCCGTTCCATCACGAGCTCGCGACGACCAAGCTGGAAATACGGCATCTATAAACGTCACCAAAATGTACCGGCCAGCAGGGTGGATCCAGGAACAAAATTTTTTTTTTGAGGGGCTCAATTACACTGT]
[+] EMBL AU066089 [TCGGAAGTCGATCAGCAAGGACATGGTTCCGGCGCGGCTTCCGGGTTCCGTCGGCCCCCACCGTCATCCACTCGTTCATGCAGGCCCGTCGGGCTCACCAACGACCACCTCGTGTCATGCCCCGCGCCACCGCGTCTGCTCCTCCTCCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAGAAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTACGTATCACTTGGTGCGTGTCTTTCTTTT ]
[+] EMBL AU066087 [ TCGATCAGCAAGGACATGG TNCGGCGCGGCTTCC GGTT CGTCGG CCCCACCGTCATCAACTCGTTCATGCAGG CCGTCGGGCTCACCAACGACCACCTCGTGTCATG CCCGCGCCACCGCGTCTGCTCCTCCTCCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAGAAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTACGTATCACTTGGTGCGTGTCTTTCTTTT ]
[-] EMBL OSS3794A [ CCTCCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAGAAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTACGTATCACTTGGTGCGTGTCTTTCTTTTT ]
[+] EMBL AK111361 [ GGCAAGAAGCTTGATTGTCAATTACGTACGTATCACTTGGTGCGTGTCTTTCTTTTTTCTCTTTCCTTCATGTCTCGAGATAGAGATAGGGTGACGATCATTAGCGGGGTGGGCTACCCCAATCCCCAGTGCATGTGGCTTGATTAAAGCGGGATGAGATAGGCTCACAGTCACACAGGCAGGCAAGCAAGCAGGGTCAGGCCATGTGCTGCCGGCAAGCGCATGTGTAGGTGAGAGAGGGAGGGGAAGAAAAGCCTGCGCATGTGACACTGCAGCTCTTGCCCTCGCTAGCTCGTCCGTCCACCCGTCCGCGCTGTGCGCGCAGATGGGCGGACGCAGCGACGGACCCAGCCAGTGCACCATCCGGGCCACCGCGACACGCAAACACCTCCGGGCAGCCATGTCCACCGGGCCATTACTCCGCATGCACCATGCGCTGTATCATAGGATTTTCATCTCCGTTCCATCACGAGCTCGCGACGACCAAGCTGGAAATACGGCATCTATAAACGTCACCAAAATGTACCGGCCAGCAGGGTGGATCCAGGAACAAAATTTTTTTTTTGAGGGGCTCAATTACACTGT]
consensusID : consensus_15663#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 343 fasta sequence
[CCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGGTCATGCCCGCGCCACCGCGTCTGCTCCTCCTCCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAGAAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTACGTATCACTTGGTGCGTGTCTTTCTTTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA998287 [CCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGACCACCTCGTGGTCATGCCCGCGCCACCGCGTCTGCTCCTCCTCCTCCGCTTAACCGATCTGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAGAAAAAACAAGAAGGAAAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATTTGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTTGATTGTCAATTACGTACGTATCACTTGGTGCGTGTCTTTCTTTAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15663#1 ------------------------------------------------------------
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 TTCCTCGAGCACTGTTGGCCTACTGGCCAACTCACATCTCATCTCTTCGCTGCTGCTACT 60
consensus_15663#1 ------------------------------------------------------------
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 CGAAGCGCACATATTCCCGGAGTTAAATCATCGGTACACCGTCTCAGAGCATTTTTCTCC 120
consensus_15663#1 ------------------------------------------------------------
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 TCACGGACAAGATGTGCAACTCCAACGTGAAGTCCGCCGGCGTCGCTCAGATCGACGGCC 180
consensus_15663#1 ------------------------------------------------------------
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 GCCCGGTGCTGCAGCCGGCGGGGAACCGCGTGGCGGCGCCTGAAGCTGCCCGGCCGCTCA 240
consensus_15663#1 ------------------------------------------------------------
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 AGAAGTCCCTGCAGAAGTCGCTCTCCATGCCGGCTTCGCTCGACAATGCTGCGGCCGCGA 300
consensus_15663#1 ------------------------------------------------------------
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 CCACCTGCGCGGCGTCCCCCGAGAAGTCCCGCGCCGCCGACTTCGCCCGCGCTGCGGCGG 360
consensus_15663#1 ------------------------------------------------------------
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 CGTCTCTTCTCCCACCACCTACTCCAGCTTCGGTCAGTGCTAAGGCGACGAGGGTGTCTG 420
consensus_15663#1 ------------------------------------------------------------
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 GAGCCAAGGTGGCTGCCGCCAGGACTGCGGCGGCGGCTGCGGCCATGGGGGGCTTGGACA 480
consensus_15663#1 ----TCGGAAGTCGATCAGCAAGGACA---------TGGTTCCGGCG----CGGCTTCCG 43
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 GGAGCAGGAAGCCCGCCAAGAAGGGCGGCGCCGCCGTGCTGCCGGTGGTGACGTTCGCGG 540
consensus_15663#1 GGTTC----CGTCGGCCCCCACCGTCATCCACTCGTTCATGCAG-----GCCCGTCGGGC 94
consensus_15663#2 ----------------------------CCACTCGTTCATGCAG-----GCC-GTCGGGC 26
consensus_15663#0 GGCTCGAGGCGTACGAGCCCGCCGGGAGCATCGCGGCGGCGCAGCGGGAGCACGTCGCGA 600
* * ** **** ** **** *
consensus_15663#1 TCACCAACGACCACCTCGTG-T-CATGCCCCGCGCCAC---CGCGTCTGCTCCTCCTCCT 149
consensus_15663#2 TCACCAACGACCACCTCGTGGT-CATGCCC-GCGCCAC---CGCGTCTGCTCCTCCTCCT 81
consensus_15663#0 TGGCGCAGGCGCAGCGCAAGATGCGGATCGCGCACTACGGCCGCACCGCGTCCTTCTCCC 660
* * * * ** * * * * * * ** * ** *** * **** ****
consensus_15663#1 CCGCTTAACCGATC-TGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCA 208
consensus_15663#2 CCGCTTAACCGATC-TGACCATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCA 140
consensus_15663#0 GAGTCGAAGGGAAAGTCAGCGCTACCGCGACGGGTGCCGCCGAGCTCGTCGCCGGTGCCG 720
* ** ** * * * ** ** * * *** * ***** ** ** *
consensus_15663#1 --AGGAGAAAAAACAAGAAGGAAAG-AGAAAAAGTGAGAGATGAGATAGCCTCAAGTA-G 264
consensus_15663#2 --AGGAGAAAAAACAAGAAGGAAAG-AGAAAAAGTGAGAGATGAGATAGCCTCAAGTA-G 196
consensus_15663#0 TCACCGGGCATGACGAGAAGCGATGCAGCTTCATCACTCCATATTCAGACCCCCTGTACG 780
* * * ** ***** * * ** * ** ** * *** *
consensus_15663#1 TAGTATAC-AGAACGGGTATTGATTTGCGAGTGTGTGT----ATGTGT-----------G 308
consensus_15663#2 TAGTATAC-AGAACGGGTATTGATTTGCGAGTGTGTGT----ATGTGT-----------G 240
consensus_15663#0 TCGCCTACCACGACGAGGAGTGGGGTGTGCCCGTGCGCGACGACGAGTTGCTGTTCGAGA 840
* * *** * *** * * ** ** * *** * * * **
consensus_15663#1 TGCTTGTGTAGATTATTGTCCCTAACTAGGCAA---GAAGCTTGATTGTCAATTACGTAC 365
consensus_15663#2 TGCTTGTGTAGATTATTGTCCCTAACTAGGCAA---GAAGCTTGATTGTCAATTACGTAC 297
consensus_15663#0 TGCTCACGTTGTCCGGCGTGCAAGTCGGGGCGGACTGGACCTCGATCCTGAAGAGGAGAC 900
**** ** * ** * * *** * * ** *** * ** **
consensus_15663#1 GTATCACTTGGTGCGTGTCTTTCTTTTTTCTC-------TTTCCTTCATGTCTCGAGATA 418
consensus_15663#2 GTATCACTTGGTGCGTGTCTTTCTTT---------------------AAAAAAAAAAAAA 336
consensus_15663#0 ACGTCTACAGGGAGGCATTCTCCGGTTTCAACGTGGACGCTGTCGCCAAGTACACGGAGA 960
** ** * * * * * * * *
consensus_15663#1 GAGATAGGGTGACGATCATTAGCGGGGTGGGCT--ACCCCAATCCCCAGTGCATGTGGCT 476
consensus_15663#2 AAAAAAA----------------------------------------------------- 343
consensus_15663#0 AGCAGATGGCATCGCTAAGCGCCGAGTTCGGCCTGGATTTGGGCACCATCAGAGGCGCCG 1020
* *
consensus_15663#1 TGATTAAAGC-------------GGGATGAGATAGG-CTCACAGTCACACAGGCAG-GCA 521
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 TCAACAACGCCTGCCGGATTTCCGAGGTGAGGAGGGACTTCGGGTCGTTCAGCAAATACG 1080
consensus_15663#1 AGCAAGCAGGGTCAGGCCATG---TGCTGCCGGCAAGC-GCATGTGTAGGTGAGAGAGGG 577
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 TGTGGGCGTTCGTAAACAACAAGCCGCTGTCGCCGAGCTACAAATACAGCCGGAAGATCC 1140
consensus_15663#1 AGGGGAAGAA----AAGCCTGCGC--AT--GTGACACTGCAGCTCT-TGCCCTCGCTAGC 628
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 CGGTGAAGACGTCCAAGTCGGAGTCGATCAGCAAGGACATGGTGCGGCGCGGCTTCCGGT 1200
consensus_15663#1 TCGTCCGTCCACCCGTC-CGCGCT-GTGCGCGCAGATGGGCGGACGCAGCGACGGACCCA 686
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 TCGTCGGCCCCACCGTCATCCACTCGTTCATGCAGGCCGTCGGGCTCACCAACGA--CCA 1258
consensus_15663#1 GCCAGTGCACCATCCGGGCCACCGCGAC-ACGCAAACACCTCCGGGCAGCCA---TGTCC 742
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 CCTCGTGTCATGCCCGCGCCACCGCGTCTGCTCCTCCTCCTCCGCTTAACCGATCTGACC 1318
consensus_15663#1 ACCG---GGCCATTACTCCGCATGCACCATGCGCTGTATCAT-AGGATTTTCATCTCCGT 798
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 ATCGCCAAAACAGTTACCGGCCAGCTCCCCGAAGGAAGCAAGGAGAAAAAACAAGAAGGA 1378
consensus_15663#1 TCCATCACGAGCTCGCGACGACCAAGCTGGAAATA-CGGCATCTATAAACGTCACCAAAA 857
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 AAGAGAAAAAGTGAGAGATGAGATAGCCTCAAGTAGTAGTATACAGAACGGGTATTGATT 1438
consensus_15663#1 TGTACCGGCCAGCAGG-GTGGATCCAGGAACAAAATTTTTTTTT-TGAGGGGCTCAATTA 915
consensus_15663#2 ------------------------------------------------------------
consensus_15663#0 TGCGAGTGTGTGTATGTGTGTGCTTGTGTAGATTATTGTCCCTAACTAGGCAAGAAGCTT 1498
consensus_15663#1 CACTGT-------------------------------------- 921
consensus_15663#2 --------------------------------------------
consensus_15663#0 GATTGTCAATTACGTACGAAAAAAAAAAAAAAAAAAGGCCACAT 1542
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||