These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15763#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1061 fasta sequence [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG-TGG-TGGACCCGTGGAGGATGATATGGC-GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG-CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA-ATT-GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC-GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA] [+] EMBL AK060518 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAA ] [+] EMBL AK105977 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAA ] [+] EMBL AK099107 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCACGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGAT ] [+] EMBL CB680185 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGT ] [+] EMBL CB652054 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGAAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTC ] [+] EMBL AU096195 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGANCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTGTTGGTTGGACCCGTGGAGGATGATATGGCNGAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACANGGATATCATTATGCATGTGAATTCTTCTGGAGGATCAGTGACAGNTTGGGATGGCCATAT ] [+] EMBL AU174001 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGANCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGNGGAGGATGATATG ] [+] EMBL AU182452 [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGNTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTNGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGT ] [+] EMBL OSS13485A [CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGNCCCGAGATCTCTGCNGCTCCTCAGGACCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGn ] [+] EMBL CF326580 [ GAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCTCAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGGACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTG ] [+] EMBL CF310263 [ CCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGCCGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCCCTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGAGCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTG TGG TGTACCCGTGGAGGATGATATGGC GAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGATCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACGG CTGGGATGGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACATTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGC ] [+] EMBL AU096196 [ CATATTCGACNCGATGAAGCATATCAGACNTGATGTTTCCCCAGTTTGTATTGGCCTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA] [-] EMBL CF310264 [ CATTTTGTATTGGACTTGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCCAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTAaaaaa ] [+] EMBL BE230011 [ GAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTG ATT GATGGAGTTATCATGAATCCCCTTAA ] [+] EMBL BE230079 [ GAAGCGATACAGCTTACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTG ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAAT ] [-] EMBL CB680186 [ GAAGCGATCCAGCTTACCTAACTCAAGAATAACGATCCATCAACCTCTCGGAGGAGCCCAAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACGTAGCATCCCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATAGTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCACCCGCTTCCTGCTTTTAGTTAGCCATGGAGTGTTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACAGTTTTTATTAGCTTGc ] [+] EMBL CB679396 [ GAGCCCTAGGACAAGAGACTGATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAA ] [+] EMBL AU174002 [ TGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA] [+] EMBL AU182407 [ TGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA] [+] EMBL AU182453 [ CATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGCTGATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA] [-] EMBL AU225150 [ ccgctGTAGATACTGA CGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTA ATT GATGGAGTTATCATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGATATCTTCTGCGATGAATATTGCAACTTAaaaagcggc ] [+] EMBL AU096325 [ gtaATGGNCTACATTCGATGGAGTTNTAATGAATCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTNAGCCATGGAGNGCTCAATCTCCNCGGAGCATTTTTTGGTTATNTTTTNGNACTGTTATTGNATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCNCAAGCAACCACATCCTGAGGCTTCAAANTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTACTATTAGGAGGNTATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA] [+] EMBL BE228246 [ ttgaa GATGGAGTTA CATG ANCCCCTTAAAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTNCTACTAGGAGGATATCTTCTGC GATGAATATTGCAACTTATTTGATGTNCTATTAGGAGGATATCTTCTGCGATGAATATTGCAACT ] consensusID : consensus_15763#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence [TGATCTTGAGATCCAGGTAAATCCACAAAGTTAAATTGTGTTTTTATCAAGATCAGGACATCTCAATAGCAAATAATTAACCATATCATTGTTTCTCTCTTGCCGGTATATGGTTCGATCTACATGAAATACATTTATTTCCACAAGCGAATAGCAACTCCGCTGGCTTTCTATTGTTACTTGTATCACCAGAAGATTTTTCTGTCACTGATTTTCCATTATTTCTTTTAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTGATTGATGGAGTTATCATGAATCCCCTTAAAGCCCTACAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTT] [+] EMBL CA767584 [TGATCTTGAGATCCAGGTAAATCCACAAAGTTAAATTGTGTTTTTATCAAGATCAGGACATCTCAATAGCAAATAATTAACCATATCATTGTTTCTCTCTTGCCGGTATATGGTTCGATCTACATGAAATACATTTATTTCCACAAGCGAATAGCAACTCCGCTGGCTTTCTATTGTTACTTGTATCACCAGAAGATTTTTCTGTCACTGATTTTCCATTATTTCTTTTAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAGCATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCATGAGCGCGAAGGAGGCAAAGGAGTATGGTCTGATTGATGGAGTTATCATGAATCCCCTTAAAGCCCTACAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCATTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGATAGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATGTACTACTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_15763#0 CGCCCCTCTCCTCCGCCCGAGCTCGAACGCGAACCCCGCCCCGAGATCTCTGCCGCTCCT 60 consensus_15763#1 ------------------------------------------------------------ consensus_15763#0 CAGGAGCCGGAGGTGCGCTCGGGCCGTGGCGACCGCCGCCGCCGCCGCTGGCCACGGGGC 120 consensus_15763#1 ------------------------------------------------------------ consensus_15763#0 CGCTCATCAGAGGAGCGGGATTTGGTCGATCAGGGATGATTTGGTGGTGCCGAGGTCGCC 180 consensus_15763#1 ------------------------------------------------------------ consensus_15763#0 CTACTTCCCTGTGGAGTATGCGTCGGGGCAGGAACGCGGGCCATCGCCCATGGTGATGGA 240 consensus_15763#1 ------------------------------------------------------------ consensus_15763#0 GCGGTTCCAGAGCGTCGTCAGCCAGCTCTTCCAGCACAGGATTATCCGGTGTGGTGGACC 300 consensus_15763#1 ------------------------------------------------------------ consensus_15763#0 CGTGGAGGATGATATGGCGAACATCATCGTTGCCCAGCTGCTATATCTCGATGCCATCGA 360 consensus_15763#1 ---------------------------------------------------------TGA 3 ** consensus_15763#0 TCCTAACAAGGATATCATTATGTATGTGAATTCTCCTGGAGGATCAGTGACAGCTGGGAT 420 consensus_15763#1 TCTTGA----GATCCAGGTAAATCCACAAAGTTAAATTGTGTTTTTATCAAGATCAGGAC 59 ** * * *** ** * ** * * * * * * * *** consensus_15763#0 GGCCATATTCGACACGATGAAGCATATCAGACCTGATGTTTCCACAGTTTGTATTGGACT 480 consensus_15763#1 ATCTCAATAGCAAATAATTAACCATATCA----TTGTTTCTCTCTTGCCGGTATATGGTT 115 * ** * * ** ** ******* * * * ** * **** * * consensus_15763#0 TGCTGCAAGTATGGGAGCTTTTCTGCTTAGTGCTGGGACAAAAGGGAAGCGATACAGCTT 540 consensus_15763#1 CGATCTA--CATGAAA-----TACATTTATTTCC---ACAAGCGAATAGCAACTCCGCTG 165 * * * *** * * *** * * **** * *** * * *** consensus_15763#0 ACCTAACTCAAGAATAATGATCCATCAACCTCTCGGAGGAGCCCAAGG-ACAAGAGACTG 599 consensus_15763#1 GCTT---TC-----TATTGTTACTTGTATCACCAGAAGATTTTTCTGTCACTGATTTTCC 217 * * ** ** ** * * * * * * * ** * ** consensus_15763#0 ATCTTGAGATCCAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAG 659 consensus_15763#1 ATTATTTCTTTTAGGCTAATGAGATGCTGCATCACAAGGCTAACCTGAATGGATACCTAG 277 ** * * ************************************************ consensus_15763#0 CATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCA 719 consensus_15763#1 CATACCACACTGGGCAGCCCCTAGATAAGATCAACGTAGATACTGACCGTGATTACTTCA 337 ************************************************************ consensus_15763#0 TGAGCGCGAAGGAGGCAAAGGAGTATGGTCTAATTGATGGAGTTATCATGAATCCCCTTA 779 consensus_15763#1 TGAGCGCGAAGGAGGCAAAGGAGTATGGTCTGATTGATGGAGTTATCATGAATCCCCTTA 397 ******************************* **************************** consensus_15763#0 AAGCCCTTCAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCA 839 consensus_15763#1 AAGCCCTACAACCGCTTCCTGCTTCTAGTTAGCCATGGAGTGCTCAATCTCCACGGAGCA 457 ******* **************************************************** consensus_15763#0 TTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGAT 899 consensus_15763#1 TTTTTTGGTTATCTTTTAGAACTGTTATTGCATCCACTGTTTTTATTAGCTTGGCAAGAT 517 ************************************************************ consensus_15763#0 AGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATG 959 consensus_15763#1 AGTTTTGCGATTCCACAAGCAACCACATCCTGAGGCTTCAAAGTTTGTACAATACAGATG 577 ************************************************************ consensus_15763#0 TACTACTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTTGATGTACTATTAGGA 1019 consensus_15763#1 TACTACTAGGAGGATATCTTCTGCGATGAATATTGCAACTTATTT--------------- 622 ********************************************* consensus_15763#0 GGATATCTTCTGCGATGAATATTGCAACTTATTTGATAAAAA 1061 consensus_15763#1 ------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||